Determination of rate distributions from kinetic experiments

Biophys J. 1992 Jan;61(1):235-45. doi: 10.1016/S0006-3495(92)81830-1.

Abstract

Rate processes in proteins are often not adequately described by simple exponential kinetics. Instead of modeling the kinetics in the time domain, it can be advantageous to perform a numerical inversion leading to a rate distribution function f(lambda). The features observed in f(lambda) (number, positions, and shapes of peaks) can then be interpreted. We discuss different numerical techniques for obtaining rate distribution functions, with special emphasis on the maximum entropy method. Examples are given for the application of these techniques to flash photolysis data of heme proteins.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Carbon Monoxide / blood*
  • Hemoglobins, Abnormal / metabolism*
  • Humans
  • Kinetics
  • Macromolecular Substances
  • Mathematics
  • Photolysis
  • Protein Binding
  • Proteins / metabolism*
  • Thermodynamics

Substances

  • Hemoglobins, Abnormal
  • Macromolecular Substances
  • Proteins
  • Carbon Monoxide
  • hemoglobin Zurich