Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae

Genome Biol. 2004;5(9):R72. doi: 10.1186/gb-2004-5-9-r72. Epub 2004 Aug 31.

Abstract

We have screened the genome of Saccharomyces cerevisiae for fragments that confer a growth-retardation phenotype when overexpressed in a multicopy plasmid with a tetracycline-regulatable (Tet-off) promoter. We selected 714 such fragments with a mean size of 700 base-pairs out of around 84,000 clones tested. These include 493 in-frame open reading frame fragments corresponding to 454 distinct genes (of which 91 are of unknown function), and 162 out-of-frame, antisense and intergenic genomic fragments, representing the largest collection of toxic inserts published so far in yeast.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cloning, Molecular / methods
  • DNA, Fungal / genetics
  • Gene Expression Regulation, Fungal / genetics*
  • Genes, Fungal / genetics
  • Genes, Fungal / physiology
  • Genes, Lethal / genetics
  • Genes, Suppressor
  • Genome, Fungal*
  • Open Reading Frames / genetics
  • Open Reading Frames / physiology
  • Phenotype
  • Reading Frames / genetics
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae / growth & development*
  • Transfection / methods
  • Transgenes / physiology

Substances

  • DNA, Fungal