RT-PCR analysis of vcrA, vcrB, and vcrC in Dehalococcoides sp. strain VS. (A) Transcriptional organization of vcrA, vcrB, and vcrC as an operon in strain VS. Agarose gel electrophoresis of RT-PCR assays with primers targeting vcrA, vcrB, and vcrC and intergenic regions of vcrA and vcrB as well as vcrB and vcrC, respectively. (B) Transcription of vcrA in strain VS and in the mixed cultures Pinellas, WS, and KB-1. g, genomic DNA as template; +, assays with RNA as template and conducted with RT; −, assays with RNA as template conducted without RT. Sizes of products are indicated and were as predicted (for vcrA, 441 bp; for vcrB, 172 bp; for vcrAB, 452 bp; for vcrBC, 429 bp; for vcrC, 445 bp). Absolute positions of used primers are the following: vcrAf, 2691 to 2711; vcrAr, 3111 to 3131; vcrBf, 3773 to 3793; vcrBr, 3921 to 3944; vcrCf, 4346 to 4365; vcrCr, 4767 to 4790; vcrABf, 3472 to 3494; vcrABr, 3924 to 3945; vcrBCf, 3910 to 3930; vcrBCr, 4335 to 4358.