Bioinformatics. 2004 Nov 22;20(17):3238-40. Epub 2004 Apr 1.

Bio-Mirror project for public bio-data distribution.

Gilbert D, Ugawa Y, Buchhorn M, Wee TT, Mizushima A, Kim H, Chon K, Weon S, Ma J, Ichiyanagi Y, Liou DM, Keretho S, Napis S.

Source

Department of Biology, Indiana University, Bloomington, IN 47405, USA.

Abstract

Timely worldwide distribution of biosequence and bioinformatics data depends on high performance networking and advances in Internet transport methods. The Bio-Mirror project focuses on providing up-to-date distribution of this rapidly growing and changing data. It offers FTP, Web and Rsync access to many high-volume databanks from several sites around the world. Experiments with data grids and other methods offer future improvements in biology data distribution.

PMID:: 15059839; [PubMed - indexed for MEDLINE]

Free full text

Publication Types, MeSH Terms

Publication Types

MeSH Terms

LinkOut - more resources

Full Text Sources

Supplemental Content

Save items

Related citations in PubMed

Data integration gets 'Sloppy'. [Nat Biotechnol. 2006]
Data integration gets 'Sloppy'.
Almeida JS, Chen C, Gorlitsky R, Stanislaus R, Aires-de-Sousa M, Eleutério P, Carriço J, Maretzek A, Bohn A, Chang A, et al. Nat Biotechnol. 2006 Sep; 24(9):1070-1.
myGrid: personalised bioinformatics on the information grid. [Bioinformatics. 2003]
myGrid: personalised bioinformatics on the information grid.
Stevens RD, Robinson AJ, Goble CA. Bioinformatics. 2003; 19 Suppl 1:i302-4.
Talisman--rapid application development for the grid. [Bioinformatics. 2003]
Talisman--rapid application development for the grid.
Oinn TM. Bioinformatics. 2003; 19 Suppl 1:i212-4.
Review An information-driven approach to pharmacogenomics. [Pharmacogenomics. 2005]
Review An information-driven approach to pharmacogenomics.
Vyas H, Summers R. Pharmacogenomics. 2005 Jul; 6(5):473-80.
Review Automation of in-silico data analysis processes through workflow management systems. [Brief Bioinform. 2008]
Review Automation of in-silico data analysis processes through workflow management systems.
Romano P. Brief Bioinform. 2008 Jan; 9(1):57-68. Epub 2007 Dec 2.

See reviews... See all...

Cited by 4 PubMed Central articles

Distribution of biological databases over lowbandwidth networks. [Bioinformation. 2012]
Distribution of biological databases over lowbandwidth networks.
Azam SS, Zarina S. Bioinformation. 2012; 8(5):239-42. Epub 2012 Mar 17.
Emerging strengths in Asia Pacific bioinformatics. [BMC Bioinformatics. 2008]
Emerging strengths in Asia Pacific bioinformatics.
Ranganathan S, Hsu WL, Yang UC, Tan TW. BMC Bioinformatics. 2008 Dec 12; 9 Suppl 12:S1. Epub 2008 Dec 12.
Review Outlook on Thailand's genomics and computational biology research and development. [PLoS Comput Biol. 2008]
Review Outlook on Thailand's genomics and computational biology research and development.
Tongsima W, Tongsima S, Palittapongarnpim P. PLoS Comput Biol. 2008 Jul 25; 4(7):e1000115. Epub 2008 Jul 25.

See all...

Related information

Related Citations
Calculated set of PubMed citations closely related to the selected article(s) retrieved using a word weight algorithm. Related articles are displayed in ranked order from most to least relevant, with the “linked from” citation displayed first.
Cited in PMC
Full-text articles in the PubMed Central Database that cite the current articles.

Recent activity

Clear Turn Off Turn On

Bio-Mirror project for public bio-data distribution.
Bio-Mirror project for public bio-data distribution.
Bioinformatics. 2004 Nov 22 ;20(17):3238-40. Epub 2004 Apr 1 .

PubMed
Gene annotation from scientific literature using mappings between keyword system...
Gene annotation from scientific literature using mappings between keyword systems.
Bioinformatics. 2004 Sep 1 ;20(13):2084-91. Epub 2004 Apr 1 .

PubMed
Arby: automatic protein structure prediction using profile-profile alignment and...
Arby: automatic protein structure prediction using profile-profile alignment and confidence measures.
Bioinformatics. 2004 Sep 22 ;20(14):2228-35. Epub 2004 Apr 1 .

PubMed
AliasServer: a web server to handle multiple aliases used to refer to proteins.
AliasServer: a web server to handle multiple aliases used to refer to proteins.
Bioinformatics. 2004 Sep 22 ;20(14):2331-2. Epub 2004 Apr 1 .

PubMed
A DNA methylation imprint, determined by the sex of the parent, distinguishes th...
A DNA methylation imprint, determined by the sex of the parent, distinguishes the Angelman and Prader-Willi syndromes.
Genomics. 1992 Aug ;13(4):917-24.

PubMed

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

PubMed

Result Filters

Display Settings:

Send to: