Crystallization and preliminary X-ray analysis of family 39 beta-D-xylosidase from Geobacillus stearothermophilus T-6

Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):583-5. doi: 10.1107/S0907444904001088. Epub 2004 Feb 25.

Abstract

beta-D-Xylosidases (EC 3.2.1.37) are hemicellulases that hydrolyze short xylooligosaccharides into single xylose units. In this study, the crystallization and preliminary X-ray analysis of the beta-D-xylosidase (XynB1) from Geobacillus stearothermophilus T-6, a family 39 glycoside hydrolase, are described. XynB1 is a tetrameric protein consisting of four identical subunits of 503 amino acids and with a calculated molecular weight of 58 001 Da. Both the native and the selenomethionine-containing XynB1 were crystallized by the hanging-drop vapour-diffusion method and the crystals were found to belong to space group P2(1)2(1)2(1), with unit-cell parameters a = 92.7, b = 165.7, c = 311.0 A. The native crystals diffracted X-rays to a resolution of 2.1 A.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Crystallization
  • Crystallography, X-Ray
  • Endo-1,4-beta Xylanases / chemistry*
  • Endo-1,4-beta Xylanases / metabolism
  • Geobacter / enzymology*
  • Geobacter / metabolism
  • Oligosaccharides / metabolism
  • Protein Structure, Quaternary
  • Protein Subunits / chemistry
  • Protein Subunits / metabolism
  • Selenomethionine / chemistry
  • Xylose / metabolism
  • beta-Glucosidase / chemistry*
  • beta-Glucosidase / metabolism

Substances

  • Bacterial Proteins
  • Oligosaccharides
  • Protein Subunits
  • Selenomethionine
  • Xylose
  • beta-Glucosidase
  • Endo-1,4-beta Xylanases
  • XynB xylanase