Functional compatibility of elongation factors between mammalian mitochondrial and bacterial ribosomes: characterization of GTPase activity and translation elongation by hybrid ribosomes bearing heterologous L7/12 proteins

J Mol Biol. 2004 Feb 13;336(2):331-42. doi: 10.1016/j.jmb.2003.12.034.

Abstract

The mammalian mitochondrial (mt) ribosome (mitoribosome) is a bacterial-type ribosome but has a highly protein-rich composition. Almost half of the rRNA contained in the bacterial ribosome is replaced with proteins in the mitoribosome. Escherichia coli elongation factor G (EF-G Ec) has no translocase activity on the mitoribosome but EF-G mt is functional on the E.coli ribosome. To investigate the functional equivalency of the mt and E.coli ribosomes, we prepared hybrid mt and E.coli ribosomes. The hybrid mitoribosome containing E.coli L7/12 (L7/12 Ec) instead of L7/12 mt clearly activated the GTPase of EF-G Ec and efficiently promoted its translocase activity in an in vitro translation system. Thus, the mitoribosome is functionally equivalent to the E.coli ribosome despite their distinct compositions. The mt EF-Tu-dependent translation activity of the E.coli ribosome was also clearly enhanced by replacing the C-terminal domain (CTD) of L7/12 Ec with the mt counterpart (the hybrid E.coli ribosome). This strongly indicates that the CTD of L7/12 is responsible for EF-Tu function. These results demonstrate that functional compatibility between elongation factors and the L7/12 protein in the ribosome governs its translational specificity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cattle
  • Enzyme Activation
  • Escherichia coli / enzymology*
  • Escherichia coli Proteins / metabolism
  • Mammals
  • Mitochondria / enzymology*
  • Mitochondrial Proteins / metabolism
  • Molecular Sequence Data
  • Peptide Chain Elongation, Translational*
  • Peptide Elongation Factor G / metabolism*
  • Peptide Elongation Factor Tu / metabolism*
  • Protein Binding
  • Recombinant Fusion Proteins / metabolism
  • Ribosomal Proteins / metabolism*
  • Ribosomes / chemistry*
  • Ribosomes / metabolism*

Substances

  • Escherichia coli Proteins
  • Mitochondrial Proteins
  • Peptide Elongation Factor G
  • Recombinant Fusion Proteins
  • Ribosomal Proteins
  • ribosomal protein L7-L12
  • Peptide Elongation Factor Tu