[Preparation of DNA-duplexes, containing internucleotide thiophosphate groups in various positions of the recognition site for the EcoRII restriction endonuclease]

Bioorg Khim. 2003 Nov-Dec;29(6):623-31. doi: 10.1023/b:rubi.0000008898.42854.7c.
[Article in Russian]

Abstract

Twenty-four 12-mer DNA duplexes, each containing a chiral phosphorothioate group successively replacing one of the internucleotide phosphate groups either in the EcoRII recognition site (5'CCA/TGG) or near to it, were obtained for studying the interaction of the restriction endonuclease EcoRII with internucleotide DNA phosphates. Twelve of the 12-mer oligonucleotides were synthesized as Rp and Sp diastereomeric mixtures. Six of them were separated by reversed-phase HPLC using various buffers. Homogeneous diastereomers of the other oligonucleotides were obtained by enzymatic ligation of the Rp and Sp diastereomers of 5- to 7-mer oligonucleotides preliminarily separated by HPLC with the corresponding short oligonucleotides on a complementary DNA template. The English version of the paper: Russian Journal of Bioorganic Chemistry, 2003, vol. 29, no. 6; see also http://www.maik.ru.

Publication types

  • English Abstract

MeSH terms

  • Base Sequence
  • Chromatography, High Pressure Liquid
  • DNA / metabolism*
  • Deoxyribonucleases, Type II Site-Specific / metabolism*
  • Organophosphorus Compounds / metabolism*

Substances

  • Organophosphorus Compounds
  • DNA
  • CCWGG-specific type II deoxyribonucleases
  • Deoxyribonucleases, Type II Site-Specific