Sequence alignment of class D β-lactamases and C-terminal domains of penicillin receptors. Alignment of amino acid sequences of the YbxI protein; class D β-lactamases OXA-20 (30), OXA-2 (7), OXA-15 (8), OXA-3 (37), PSE2 (19), OXA-11 (16), OXA-7 (38), OXA-5 (6), LCR1 (6), OXA-1 (32), OXA-18 (34), and OXA-9 (40); and the CTDs of penicillin receptors involved in the induction of β-lactamases (B. licheniformis [B.li] BlaR [26] and S. aureus [S.au] BlaR [35] or methicillin-resistant S. aureus PBP [S. aureus MecR] [18]). The underlined sequence in YbxI corresponds to the signal peptide. In the consensus sequence, residues in uppercase letters are strictly conserved in all aligned sequences. The residues in lowercase letters are those conserved in more than 50% of the sequences. The other consensus symbols are as follows: ! is either I or V; $ is L or M; % is F or Y; and # is N, D, Q, or E. The residues involved in the active-site signatures of serine-PREs are underlined. Dots indicate deletions. Amino acid sequence alignments were performed with the Multalin program of the ExPAsy server (http://us.expasy.org/tools/#align) (5).