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Mol Biol (Mosk). 2003 Sep-Oct;37(5):843-9.

[Computer analysis of regulating metabolism of glycerol-3-phosphate in proteobacteria genome].

[Article in Russian]

Author information

  • 1Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, 101447 Russia. dlv2k@mail.ru

Abstract

Comparative computer-assisted analysis was used to study putative GlpR-regulons responsible for metabolism of glycerol and glycerol-3-phosphate in genomes of alpha-, beta-, and gamma-proteobacteria. New palindromic GlpR-binding signals were identified in gamma-proteobacteria; consensus sequences being TGTTCGATAACGAACA for Enterobacteriaceae, wTTTTCGTATACGAAAAw for Pseudomonadaceae, and AATGCTCGATCGAGCATT for Vibrionaceae. The signals in alpha- and beta-proteobacteria were also identified: they contained 3-4 direct TTTCGTT repeats separated by 3-4 nucleotide pairs.

PMID:
14593921
[PubMed - indexed for MEDLINE]
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