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BMC Bioinformatics. 2003 Oct 17;4:50.

Eval: a software package for analysis of genome annotations.

Author information

  • 1Department of Computer Science and Engineering, Washington University, St, Louis, MO 63130, USA. evan@cse.wustl.edu

Abstract

SUMMARY:

Eval is a flexible tool for analyzing the performance of gene annotation systems. It provides summaries and graphical distributions for many descriptive statistics about any set of annotations, regardless of their source. It also compares sets of predictions to standard annotations and to one another. Input is in the standard Gene Transfer Format (GTF). Eval can be run interactively or via the command line, in which case output options include easily parsable tab-delimited files.

AVAILABILITY:

To obtain the module package with documentation, go to http://genes.cse.wustl.edu/ and follow links for Resources, then Software. Please contact brent@cse.wustl.edu

PMID:
14565849
[PubMed - indexed for MEDLINE]
PMCID:
PMC270064
Free PMC Article

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