Functional analysis of a phosphatidic acid binding domain in human Raf-1 kinase: mutations in the phosphatidate binding domain lead to tail and trunk abnormalities in developing zebrafish embryos

J Biol Chem. 2003 Nov 14;278(46):45690-6. doi: 10.1074/jbc.M302933200. Epub 2003 Aug 18.

Abstract

Previously, we and others identified a 35-amino acid segment within human Raf-1 kinase that preferentially binds phosphatidic acid. The presence of phosphatidic acid was found to be necessary for the translocation of Raf-1 to the plasma membrane. We have now employed a combination of alanine-scanning and deletion mutagenesis to identify the critical amino acid residues in Raf-1 necessary for interaction with phosphatidic acid. Progressive mutations within a tetrapeptide motif (residues 398-401 of human Raf-1) reduced and finally eliminated binding of Raf-1 to phosphatidic acid. We then injected zebrafish embryos with RNA encoding wild-type Raf-1 kinase or a mutant version with triple alanine mutations in the tetrapeptide motif and followed the morphological fate of embryonic development. Embryos with mutant but not wild-type Raf-1 exhibited defects in posterior axis formation exemplified by bent trunk and tail structures. Molecular evidence for lack of signaling through mutated Raf-1 was obtained by aberrant in situ hybridization of the ntl (no tail) gene, which functions downstream of Raf-1. Our results demonstrate that a functional phosphatidate binding site is necessary for Raf-1 function in embryonic development.

MeSH terms

  • Alanine / chemistry
  • Amino Acid Motifs
  • Amino Acid Sequence
  • Animals
  • Binding Sites
  • Dose-Response Relationship, Drug
  • Gene Deletion
  • Glutathione Transferase / metabolism
  • Humans
  • In Situ Hybridization
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Mutation
  • Phosphatidic Acids / chemistry*
  • Phosphatidic Acids / metabolism
  • Protein Binding
  • Protein Structure, Tertiary
  • Protein Transport
  • Proto-Oncogene Proteins c-raf / chemistry*
  • Proto-Oncogene Proteins c-raf / genetics*
  • Proto-Oncogene Proteins c-raf / physiology
  • RNA / metabolism
  • Recombinant Fusion Proteins / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Homology, Amino Acid
  • Tail / embryology
  • Transcription, Genetic
  • Zebrafish / embryology*

Substances

  • Phosphatidic Acids
  • Recombinant Fusion Proteins
  • RNA
  • Glutathione Transferase
  • Proto-Oncogene Proteins c-raf
  • Alanine