Seeing chordate evolution through the Ciona genome...[Genome Biol. 2003]

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1: Genome Biol. 2003;4(3):208. Epub 2003 Mar 3. Links

Seeing chordate evolution through the Ciona genome sequence.

Cañestro C, Bassham S, Postlethwait JH.

Institute of Neuroscience, 1254 University of Oregon, 1425 E, 13th Avenue, Eugene, OR 97403, USA.

A draft sequence of the compact genome of the sea squirt Ciona intestinalis, a non-vertebrate chordate that diverged very early from other chordates, including vertebrates, illuminates how chordates originated and how vertebrate developmental innovations evolved.

PMID: 12620098 [PubMed - indexed for MEDLINE]

PMCID: PMC153453

Regulatory genes in the ancestral chordate genomes.
Dev Genes Evol. 2008 Dec; 218(11-12):715-21. Epub 2008 Sep 5.

[Dev Genes Evol. 2008]
A genomewide survey of developmentally relevant genes in Ciona intestinalis. V. Genes for receptor tyrosine kinase pathway and Notch signaling pathway.
Dev Genes Evol. 2003 Jun; 213(5-6):254-63. Epub 2003 May 9.

[Dev Genes Evol. 2003]
The repertoire of G protein-coupled receptors in the sea squirt Ciona intestinalis.
BMC Evol Biol. 2008 May 1; 8:129. Epub 2008 May 1.

[BMC Evol Biol. 2008]
ReviewCiona intestinalis: chordate development made simple.
Dev Dyn. 2005 May; 233(1):1-19.

[Dev Dyn. 2005]
Review[Draft genome sequence of Ciona intestinalis and its meaning]
Tanpakushitsu Kakusan Koso. 2003 Jul; 48(9):1282-6.

[Tanpakushitsu Kakusan Koso. 2003]
» See reviews... | » See all...

Cited by 3 PubMed Central articles

Consequences of lineage-specific gene loss on functional evolution of surviving paralogs: ALDH1A and retinoic acid signaling in vertebrate genomes.
Cañestro C, Catchen JM, Rodríguez-Marí A, Yokoi H, Postlethwait JH. PLoS Genet. 2009 May; 5(5):e1000496. Epub 2009 May 29.

[PLoS Genet. 2009]
Evolution of developmental roles of Pax2/5/8 paralogs after independent duplication in urochordate and vertebrate lineages.
Bassham S, Cañestro C, Postlethwait JH. BMC Biol. 2008 Aug 22; 6:35. Epub 2008 Aug 22.

[BMC Biol. 2008]
Evidence that talin alternative splice variants from Ciona intestinalis have different roles in cell adhesion.
Singiser RH, McCann RO. BMC Cell Biol. 2006 Dec 6; 7:40. Epub 2006 Dec 6.

[BMC Cell Biol. 2006]

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Cited by 3 PubMed Central articles

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