Format

Send to:

Choose Destination
See comment in PubMed Commons below
Bioinformatics. 2003 Mar 1;19(4):524-31.

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.

Author information

  • 1Control and Dynamical Systems, MC 107-81, California Institute of Technology, Pasadena, CA 91125, USA. sysbio-team@caltech.edu

Abstract

MOTIVATION:

Molecular biotechnology now makes it possible to build elaborate systems models, but the systems biology community needs information standards if models are to be shared, evaluated and developed cooperatively.

RESULTS:

We summarize the Systems Biology Markup Language (SBML) Level 1, a free, open, XML-based format for representing biochemical reaction networks. SBML is a software-independent language for describing models common to research in many areas of computational biology, including cell signaling pathways, metabolic pathways, gene regulation, and others.

AVAILABILITY:

The specification of SBML Level 1 is freely available from http://www.sbml.org/

PMID:
12611808
[PubMed - indexed for MEDLINE]
Free full text
PubMed Commons home

PubMed Commons

0 comments
How to join PubMed Commons

    Supplemental Content

    Full text links

    Icon for HighWire
    Loading ...
    Write to the Help Desk