Display Settings:

Format

Send to:

Choose Destination
See comment in PubMed Commons below
Bioinformatics. 2002 Aug;18(8):1135-6.

TFBS: Computational framework for transcription factor binding site analysis.

Author information

  • 1Bioinformatics Unit, Center for Genomics and Bioinformatics, Karolinska Institutet, Stockholm, Sweden. Boris.Lenhard@cgb.ki.se

Abstract

MOTIVATION:

TFBS is a set of integrated, object-oriented Perl modules for transcription factor binding site detection and analysis. It implements objects representing specificity profile matrices, binding sites and sets thereof, pattern generators, and pattern database interfaces. The modules are interoperable with the BioPerl open source system.

AVAILABILITY AND SUPPLEMENTARY INFORMATION:

The module package with documentation and example scripts are available at http://forkhead.cgb.ki.se/TFBS/

PMID:
12176838
[PubMed - indexed for MEDLINE]
Free full text
PubMed Commons home

PubMed Commons

0 comments
How to join PubMed Commons

    Supplemental Content

    Icon for HighWire
    Loading ...
    Write to the Help Desk