Point mutation in the alpha helix of the HLA-C alpha2 domain generates a novel HLA-C allele,HLA-Cw*0106, in a Han Chinese individual in Taiwan

Tissue Antigens. 2002 May;59(5):433-5. doi: 10.1034/j.1399-0039.2002.590514.x.

Abstract

We report herein the identification of a new HLA-C allele using sequence-based typing (SBT). This novel allele, HLA-Cw*0106, was found in a Han Chinese individual from Taiwan. This individual was typed using SBT as having a class I HLA genotype of HLA-A*0206/0207, HLA-B*4601/5601, and HLA-Cw*0102/0106. This new allele differs from HLA-Cw*0102 in one of the nucleotides of the polymorphic exon 3 at codon 152 (GAG-->GTG; E152V). This residue is located in the alpha helix of the HLA-C alpha2 domain and may have the potential to affect the binding of HLA-C molecules with antigenic peptides and/or the interactions with the T cell receptor. This new allele was detected in a few individuals of Han Chinese in Taiwan, but has not yet been observed in the aboriginal populations in Taiwan.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Asian People / genetics*
  • Base Sequence
  • HLA-C Antigens / chemistry*
  • HLA-C Antigens / genetics*
  • Humans
  • Molecular Sequence Data
  • Point Mutation*
  • Protein Structure, Secondary
  • Taiwan

Substances

  • HLA-C Antigens
  • HLA-C*01:06 antigen

Associated data

  • GENBANK/AJ418708
  • GENBANK/AJ418709