The two distinct mechanisms of branching morphogenesis in the pubertal mouse mammary gland. The mouse mammary gland branches through two distinct mechanisms: bifurcation of TEBs and side branching. Bifurcation of TEBs to form primary and secondary branches occurs only from immature ducts. The branch point is formed through deposition of stroma at the cleft site, and the ducts extend directly into adipose tissue, without myoepithelial cells or stroma and with only a minimal basement membrane at their invasive front. In contrast, in side branching, a new branch forms from a mature duct. First, the region where the bud is to form must be defined. Then the emerging bud extrudes through and remodels a region containing layers of myoepithelial cells, basement membrane, and periductal stroma. Distinct molecules have been implicated in each type of branching. Factors involved in side branching include the progesterone receptor, Wnts, HSPGs, nuclear factor κB (NFκB), MMPs, TIMP-1, TGFβ and its receptor (TGFβIIR), gelsolin, P-cadherin, CCAAT/enhancer binding protein β (C/EBPβ), CSF-1, Stat5a, and Stat5b. Factors involved in TEB formation include β1 integrin, laminin-1, MMPs, discoidin domain receptor–1 (DDR-1), GH, IGF-I and its receptor IGF-IR, Ptc-1, inhibins and activins, and p27Kip-1.