ICP0 sequences encoded by exon 2 express an E3 ligase function. (A) In vitro ubiquitylation reactions were performed as previously described (17). The mixtures containing GST or the indicated GST fusion protein, E1, the E2 UbcH6, biotinylated Ub, ATP, and an ATP regenerating system were allowed to react for 30 min, then were subjected to electrophoresis in denaturing polyacrylamide gels and reacted with streptavidin HRP to detect biotinylated Ub. The dots to the right of the bands indicate polyubiquitylated species, which are specifically present or augmented in reactions containing GST-exon 2, either wild-type or carrying the D199A substitution. a, monoubiquitylated UbcH6; b, proteins present in reactions or ubiquitylated species formed independently of E3 activity, which reacted with streptavidin–HRP. (B) The same as A, except that the electrophoretically proteins were reacted with anti-GST antibody. The data serve as a loading control. (C) [His6]-UbcH6 was pulled down with talon resin from reaction mixtures containing UbcH6, GST, or the indicated GST fusion protein to determine whether the E2 was being ubiquitylated in the reactions (17), separated as above, and probed with streptavidin–HRP conjugate. a, monoubiquitylated UbcH6. Note the absence of polyubiquitylated UbcH6. (D) In vitro ubation reactions were done as in A but with E2 UbcH5a. The reaction mixture was probed for ubiquitylated species with streptavidin–HRP conjugate. The dots to the right of the bands indicate polyubiquitylated species, which are present or augmented in reactions containing GST-exon 2. (E) The electrophoretically separated reaction mix was reacted with anti-GST antibody as a loading control. (F) The experiment was set up as above but with the E2 cdc34. The objective was to test whether a mutation reported to abolish interaction with USP7 (36) affects the polyubiquitylation of cdc34 by ICP0 sequences encoded by exon 3. The reaction mixtures were separated on denaturing polyacrylamide gels and reacted with streptavidin–HRP conjugate to detect Ub. Note the presence of polyubiquitylated species in lanes 4 and 5.