Identification and sequence characterization of a novel HLA-A11 serological variant (HLA-A*1108)

Tissue Antigens. 2001 Jun;57(6):543-5. doi: 10.1034/j.1399-0039.2001.057006543.x.

Abstract

In this report we describe the identification of a novel HLA-A*11 allele, HLA-A*1108, found in two individuals of a Spanish family. This new allele was detected during routine HLA typing by an atypical serological reactivity pattern and by inconclusive patterns obtained in DNA-based typing methods. The nucleotide sequence of exons 2 and 3 of HLA-A*1108 was identical to HLA-A*11011 except for two nucleotide substitutions at codons 152 (GCG-->GAG) and 156 (CAG-->CGG). These mutations change the non-charged amino acid alanine, at codon 152, to negative glutamic acid, and also non-charged glutamine, at codon 156, to positive arginine, which may explain its anomalous serological reactivity.

Publication types

  • Comparative Study

MeSH terms

  • Alleles
  • Amino Acid Sequence
  • Amino Acid Substitution
  • Arginine
  • Base Sequence
  • Codon
  • Exons / genetics
  • Genetic Variation* / immunology
  • Glutamic Acid
  • HLA-A Antigens / genetics*
  • HLA-A Antigens / immunology*
  • HLA-A11 Antigen
  • Haplotypes
  • Humans
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Pedigree
  • Polymorphism, Single Nucleotide
  • Sequence Alignment
  • Sequence Homology, Nucleic Acid

Substances

  • Codon
  • HLA-A Antigens
  • HLA-A11 Antigen
  • Glutamic Acid
  • Arginine

Associated data

  • GENBANK/AF284443