Serial dilution RT-PCR and immunoblot analyses of the ospE-related, ospF-related, and elp genes and proteins. (A) Total RNA was isolated and processed as indicated in Materials and Methods from spirochetes cultivated in vitro at 23°C, shifted from 23 to 37°C, or cultivated within rat peritoneal DMCs. Twofold serial dilutions of cDNA were amplified for 45 cycles by PCR with the specific primers indicated in Table 1 to detect mRNA abundance under the various conditions. The final amounts of cDNA used were from 5 pg to 39 fg for flaB, 313 to 2.4 pg for ospA and ospC, and 20 ng to 156 pg for the various ospE-related, ospF-related, and elp genes. −RT indicates reaction mixtures lacking reverse transcriptase; + and − indicate control PCRs using 10 ng of total B. burgdorferi strain 297 genomic DNA and water, respectively. (B) B. burgdorferi whole-cell lysates probed with 1:100 dilutions of affinity-purified rat anti-OspC, -OspE, -ElpB1, -p21, -ElpOs2, -BbK2.10, -ElpA1, and -ElpA2 or MAb 10D7-42 for OspF/BbK2.11, 1H6-33 for FlaB, and 1402-27 for OspA. Lysates were generated from organisms cultivated in vitro at 23°C, shifted from 23 to 37°C, or cultivated within rat peritoneal DMCs. Protein expression was detected using the Enhanced Chemiluminescence Plus Western blotting system as described in Materials and Methods.