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Functional annotation of a full-length mouse cDNA collection.
Kawai J,
Shinagawa A,
Shibata K,
Yoshino M,
Itoh M,
Ishii Y,
Arakawa T,
Hara A,
Fukunishi Y,
Konno H,
Adachi J,
Fukuda S,
Aizawa K,
Izawa M,
Nishi K,
Kiyosawa H,
Kondo S,
Yamanaka I,
Saito T,
Okazaki Y,
Gojobori T,
Bono H,
Kasukawa T,
Saito R,
Kadota K,
Matsuda H,
Ashburner M,
Batalov S,
Casavant T,
Fleischmann W,
Gaasterland T,
Gissi C,
King B,
Kochiwa H,
Kuehl P,
Lewis S,
Matsuo Y,
Nikaido I,
Pesole G,
Quackenbush J,
Schriml LM,
Staubli F,
Suzuki R,
Tomita M,
Wagner L,
Washio T,
Sakai K,
Okido T,
Furuno M,
Aono H,
Baldarelli R,
Barsh G,
Blake J,
Boffelli D,
Bojunga N,
Carninci P,
de Bonaldo MF,
Brownstein MJ,
Bult C,
Fletcher C,
Fujita M,
Gariboldi M,
Gustincich S,
Hill D,
Hofmann M,
Hume DA,
Kamiya M,
Lee NH,
Lyons P,
Marchionni L,
Mashima J,
Mazzarelli J,
Mombaerts P,
Nordone P,
Ring B,
Ringwald M,
Rodriguez I,
Sakamoto N,
Sasaki H,
Sato K,
Schönbach C,
Seya T,
Shibata Y,
Storch KF,
Suzuki H,
Toyo-oka K,
Wang KH,
Weitz C,
Whittaker C,
Wilming L,
Wynshaw-Boris A,
Yoshida K,
Hasegawa Y,
Kawaji H,
Kohtsuki S,
Hayashizaki Y;
RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium.
Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center, Yokohama Institute, Kanagawa, Japan.
The RIKEN Mouse Gene Encyclopaedia Project, a systematic approach to determining the full coding potential of the mouse genome, involves collection and sequencing of full-length complementary DNAs and physical mapping of the corresponding genes to the mouse genome. We organized an international functional annotation meeting (FANTOM) to annotate the first 21,076 cDNAs to be analysed in this project. Here we describe the first RIKEN clone collection, which is one of the largest described for any organism. Analysis of these cDNAs extends known gene families and identifies new ones.
PMID: 11217851 [PubMed - indexed for MEDLINE]
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Cited by over 100 PubMed Central articles
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Glyco-catch method: A lectin affinity technique for glycoproteomics.
Hirabayashi J, Hashidate T, Kasai K.
J Biomol Tech. 2002 Dec; 13(4):205-18.
[J Biomol Tech. 2002]
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The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation.
Kawaji H, Severin J, Lizio M, Waterhouse A, Katayama S, Irvine KM, Hume DA, Forrest AR, Suzuki H, Carninci P, et al.
Genome Biol. 2009; 10(4):R40. Epub 2009 Apr 19.
[Genome Biol. 2009]
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FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions.
Severin J, Waterhouse AM, Kawaji H, Lassmann T, van Nimwegen E, Balwierz PJ, de Hoon MJ, Hume DA, Carninci P, Hayashizaki Y, et al.
Genome Biol. 2009; 10(4):R39. Epub 2009 Apr 19.
[Genome Biol. 2009]
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