Bioinformatics. 2000 Nov;16(11):1048-9.

VARSPLIC: alternatively-spliced protein sequences derived from SWISS-PROT and TrEMBL.

Source

EMBL Outstation Hinxton, The European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK. pkersey@ebi.ac.uk

Abstract

The program varsplic.pl uses information present in the SWISS-PROT and TrEMBL databases to create new records for alternatively spliced isoforms. These new records can be used in similarity searches. AVAILABILITY: The program is available at ftp://ftp.ebi.ac.uk/pub/software/swissprot/, together with regularly updated output files. CONTACT: pkersey@ebi.ac.uk

PMID:: 11159319; [PubMed - indexed for MEDLINE]

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