Western blots of TS-soluble and Sarkosyl-insoluble fractions of R406W brains and protein chemical analysis of PHF-tau purified from R406W brains. A: Specificities of AR406 and AW406 confirmed by Western blotting of recombinant wild-type (lanes 1–4) and R406W tau (lanes 5–8) as authentic antigens. Lanes 1 and 5, 0.8 ng; lanes 2 and 6, 4 ng; lanes 3 and 7, 20 ng; lanes 4 and 8, 100 ng; and τ (rightmost lane), six isoforms of recombinant tau. B: Sarkosyl-insoluble fractions prepared from frontal cortices of an AD patient (lane 1), R406W Patient 1 (lane 2), and Patient 2 (lane 3), temporal cortex of Patient 2 (lane 4), hippocampus of Patient 2 (lane 5) and cerebellum of Patient 2 (lane 6) were subjected to semiquantitative Western blotting with AR406 and AW406. PHF-tau (arrowheads) and a smear were labeled in specimens from various cortices of an AD and R406W brains, but not in those from cerebellum. In our hands, the 64-kd band of PHF-tau are usually resolved into closely spaced two bands. All samples corresponded to preparations from 0.5 mg wet weight tissue, except for a sample from Patient 1, which was from 2.5 mg wet weight tissue. C: TS-soluble fractions were prepared from frontal cortices (lanes 1–3) and cerebella (lanes 4–6) of an AD patient (lanes 1 and 4), R406W Patient 1 (lanes 2 and 5), and Patient 2 (lanes 3 and 6). Before or after dephosphorylation (AP), proteins equivalent to that contained in 1.0 mg tissue were subjected to semiquantitative Western blotting with AR406 and AW406. Note that wild-type tau but not mutant tau in the frontal cortex and cerebellum of R406W brains exhibited a slight but obvious mobility shift after dephosphorylation. Upper two bands in AP+ lanes probably come from indiscernible phosphorylated counterparts with slower mobility. D: The PHF-tau purified from R406W brains (a) and authentic recombinant wild-type (b) and R406W tau (c) were digested with API, and the produced peptides were separated on a Select B column as described in Materials and Methods. Note that the elution positions of peaks 1 and 2 (a) exactly correspond to those of peaks 3 (b) and 4 (c), generated from wild-type and mutant tau, respectively. E: The peptides in peaks 1–4 in D were subjected to matrix-assisted laser desorption ionization time-of-flight mass spectrometry. The amino acid sequence of the carboxy half of human tau is shown. The mutation is indicated by arrowhead, and the carboxy-terminal peptide (residues 396–438) is boxed.