Genomic structures and sequences of two closely linked genes (AMT, TCTA) on dog chromosome 20q15.1-->q15.2

Cytogenet Cell Genet. 2000;89(1-2):98-100. doi: 10.1159/000015573.

Abstract

Analysis of genomic sequence from canine chromosome 20q15.1-->q15.2 revealed the presence of two closely linked genes. The two genes represent the corresponding canine orthologs of human aminomethyltransferase (AMT) and the human T-cell leukemia translocation associated (TCTA) gene. Aminomethyltransferase or glycine cleavage system T-protein is an important enzyme in glycine metabolism. The reported canine AMT gene spans 5 kb and consists of nine exons. It encodes a protein of 403 amino acids with 88% identity to human aminomethyltransferase. Human TCTA is located on 3p21 near the breakpoint of a t(1;3) translocation observed in some cancer cell lines. The 4-kb canine TCTA gene consists of three exons and probably represents a pseudogene. It is located adjacent to AMT and very close to DAG1 and BSN.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aminomethyltransferase
  • Animals
  • Base Sequence
  • Cloning, Molecular
  • Codon, Initiator / genetics
  • Dogs
  • Exons / genetics*
  • Genetic Linkage / genetics
  • Humans
  • Hydroxymethyl and Formyl Transferases / genetics*
  • Introns / genetics*
  • Leukemia, T-Cell / genetics*
  • Molecular Sequence Data
  • Physical Chromosome Mapping*
  • Promoter Regions, Genetic / genetics
  • Pseudogenes / genetics
  • Sequence Homology, Nucleic Acid
  • Translocation, Genetic / genetics*

Substances

  • Codon, Initiator
  • Hydroxymethyl and Formyl Transferases
  • Aminomethyltransferase

Associated data

  • GENBANK/AJ012166