Detection of drug-resistant virus subpopulations. RTV DNA representing genetically defined wild-type or drug-resistant mutant viruses were mixed at various ratios and were cotransfected into 293 cells to generate virus stocks. The drug susceptibility of each mixture was determined by the phenotypic assay. (A) Mixtures of wild-type virus and a patient virus clone containing RT mutations M41L, A62V, T69SSA, L74V, M184V, L210W, and T215Y tested against ZDV. (B) Mixtures of wild-type virus and a patient virus clone containing PR mutations K20R, L24I, G48V, I54V, V77I, and V82A tested against NFV. ◊, 0% mutant and 100% wild type; ■, 25% mutant and 75% wild type; □, 50% mutant and 50% wild type; ●, 75% mutant and 25% wild type; ⧫, 100% mutant and 0% wild type. Vertical dashed lines denote the IC50.