Bioinformatics. 1999 Jan;15(1):87-8.

BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs.

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Institut de Génétique et de Biologie Moleculaire et Cellulaire (CNRS/INSERM/ULP), BP 163, 67404 Illkirch Cedex, France. julie@igbmc.u-strasbg.fr

Abstract

SUMMARY:

BAliBASE is a database of manually refined multiple sequence alignments categorized by core blocks of conservation sequence length, similarity, and the presence of insertions and N/C-terminal extensions.

AVAILABILITY:

From http://www-igbmc. u-strasbg.fr/BioInfo/BAliBASE/index.html

PMID:: 10068696; [PubMed - indexed for MEDLINE]

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BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations. [Nucleic Acids Res. 2001]
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Cited by 74 PubMed Central articles

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