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Taxonomy

Human rotavirus strain WA

Human rotavirus strain wa is a below-species classification of Rotavirus a

Taxonomy ID: 10962

NCBI Virus
See the results of this search (12 items) in our new Identical Protein Groups database.

Items: 12

1.

RecName: Full=Non-structural protein 3; Short=NSP3; AltName: Full=NCVP4; AltName: Full=Non-structural RNA-binding protein 34; Short=NS34

313 aa protein

Accession:
Q82054.1
GI:
75567305

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
2.

RecName: Full=Non-structural protein 2; Short=NSP2; AltName: Full=NCVP3; AltName: Full=Non-structural RNA-binding protein 35; Short=NS35

317 aa protein

Accession:
Q03245.1
GI:
549384

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
3.

RecName: Full=Outer capsid protein VP4; AltName: Full=Hemagglutinin; Contains: RecName: Full=Outer capsid protein VP8*; Contains: RecName: Full=Outer capsid protein VP5*

775 aa protein

Accession:
P11193.3
GI:
226693611

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
4.

RecName: Full=Protein VP3; Includes: RecName: Full=2',5'-phosphodiesterase; Includes: RecName: Full=mRNA guanylyltransferase; Includes: RecName: Full=mRNA (guanine-N(7))-methyltransferase

835 aa protein

Accession:
Q6WVH5.1
GI:
75550267

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
5.

RecName: Full=Non-structural protein 5; Short=NSP5; AltName: Full=NS26

197 aa protein

Accession:
P04516.2
GI:
226693549

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
6.

RecName: Full=Non-structural glycoprotein 4; Short=NSP4; AltName: Full=NCVP5; AltName: Full=NS28

175 aa protein

Accession:
P03535.1
GI:
139544

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
7.

RecName: Full=RNA-directed RNA polymerase; AltName: Full=Protein VP1

1088 aa protein

Accession:
A4ZCW8.1
GI:
226737508

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
8.

RecName: Full=Non-structural protein 6; Short=NSP6

92 aa protein

Accession:
Q993T1.1
GI:
81966186

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
9.

RecName: Full=Non-structural protein 1; Short=NSP1; AltName: Full=NCVP2; AltName: Full=Non-structural RNA-binding protein 53; Short=NS53

486 aa protein

Accession:
P35424.1
GI:
549389

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
10.

RecName: Full=Outer capsid glycoprotein VP7; Flags: Precursor

326 aa protein

Accession:
P03532.1
GI:
139535

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
11.

RecName: Full=Intermediate capsid protein VP6

397 aa protein

Accession:
P03530.1
GI:
139503

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
12.

RecName: Full=Inner capsid protein VP2

890 aa protein

Accession:
P11231.1
GI:
139211

PubMed Taxonomy

GenPept Identical Proteins FASTA Graphics 
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Analyze these sequences

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  • Align sequences with COBALT
    Align multiple protein sequences with COBALT, which computes an alignment using conserved domain and local sequence similarity information.
  • Identify Conserved Domains with CD-Search
    Use Conserved Domain Search (CD-search) to identify conserved domains in these protein sequences compared against conserved domain models.

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