| 129 | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| 129/J | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| 129/Ola | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| 129/Sv | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| 129/SvEvTac | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| 129/SvJ | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| 129S7/SvEv | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| A/J | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| AKR/J | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| B6/CBAF1J | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| BALB/c | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| C3H | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| C57BL/6J | A largely finished reference assembly, produced by NCBI in consultation with the Mouse Genome Sequencing Consortium, that contains small amounts of WGS and HTGS Draft sequence. |
| Cast/Ei | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| Celera | Celera Genomics whole genome shotgun assembly. |
| NOD | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| SJL/J | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| Spret/Ei | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
| unknown | Finished sequence from clones of one strain or sub-strain, assembled into contigs and reviewed by NCBI staff. |
Clones: Generated as part of the NCBI annotation; based on sequences deposited to GenBank and Trace.