NCBI
Human genome overview page (Annotation Release 106)
Human genome overview page (Annotation Release 105)
Map Viewer Home GoUp1.gif
GoUp2.gif
Map Viewer Help
Human Maps Help
FTP
Data As Table View
mapsnoptions.gif
Region Shown:

Homo sapiens (human)  Annotation Release 106 (Current)BLAST human sequences
Chromosome: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 [ X ] Y MT
Query: F9    [clear]
 Master Map: Phenotype (includes QTLs) Summary of Maps mapsnoptions.gif 
Region Displayed: 138,050K-141,170K bp   Download/View Sequence/Evidence

Summary of Maps:
Map 1: VariationTable View
Region Displayed: 138,050K-141,170K bp   Download/View Sequence/Evidence
Total Variations On Chromosome: 2195659
Variations Labeled: 30 Total Variations in Region: 30
Map 2: Genes On SequenceTable View
Region Displayed: 138,050K-141,170K bp   Download/View Sequence/Evidence
Total Genes On Chromosome: 1805
Genes Labeled: 26 Total Genes in Region: 26
Map 3: Phenotype (includes QTLs)Table View
Region Displayed: 138,050K-141,170K bp   Download/View Sequence/Evidence
Total Phenotypes On Chromosome: 217
Phenotypes Labeled: 9 Total Phenotypes in Region: 9
GeneBCYRN1P1
Aliases
BC200b, BCYRN1P1
GeneCDR1
OTTHUMP00000024168|cerebellar degeneration-related antigen 1
cerebellar degeneration-related antigen 1
cerebellar degeneration-related protein 1
OTTHUMP00000024168
Aliases
CDR1, CDR, CDR62A, CDR34
GeneF9
Christmas factor|FIX F9|factor 9|plasma thromboplastic component|plasma thromboplastin component
FIX F9
Christmas factor
Christmas factor|factor 9|plasma thromboplastic component
plasma thromboplastic component
Christmas factor|factor 9|plasma thromboplastic component|plasma thromboplastin component
plasma thromboplastin component
factor 9
F9 p22
serine protease
factor IX F9
hCG_14694
Christmas factor|FIX F9|OTTHUMP00000024154|factor 9|plasma thromboplastic component|plasma thromboplastin component
OTTHUMP00000024154
Aliases
P19, FIX, PTC, MGC129641, HEMB, F9, MGC129642, THPH8
GeneFGF13
FGF-13
FGF-13|fibroblast growth factor homologous factor 2
fibroblast growth factor homologous factor 2
OTTHUMP00000024145
OTTHUMP00000024147
hCG_14696
FGF-13|OTTHUMP00000024145|OTTHUMP00000024147|fibroblast growth factor homologous factor 2
FGF-13|OTTHUMP00000024143|OTTHUMP00000024144|OTTHUMP00000024145|fibroblast growth factor homologous factor 2
OTTHUMP00000024143
OTTHUMP00000024144
Aliases
FHF-2, FGF13, FGF2, FHF2
GeneMCF2
OTTHUMP00000024155
OTTHUMP00000024158
OTTHUMP00000226076
OTTHUMP00000024156
OTTHUMP00000024157
OTTHUMP00000024159
OTTHUMP00000024159|Oncogene MCF2 (oncogene DBL)|proto-oncogene DBL|proto-oncogene MCF-2
hCG_1737092
proto-oncogene DBL
Oncogene MCF2 (oncogene DBL)
proto-oncogene MCF-2
Oncogene MCF2 (oncogene DBL)|proto-oncogene DBL|proto-oncogene MCF-2
OTTHUMP00000024155|OTTHUMP00000024156|OTTHUMP00000024157|OTTHUMP00000024158|OTTHUMP00000024159|OTTHUMP00000226076|Oncogene MCF2 (oncogene DBL)|proto-oncogene DBL|proto-oncogene MCF-2
Aliases
MCF2, ARHGEF21, DBL
GeneSOX3
OTTHUMP00000024166
hCG_14833
OTTHUMP00000024166|transcription factor SOX-3
transcription factor SOX-3
Aliases
PHP, PHPX, SOX3, GHDX, SOXB, MRGH
GeneSRD5A1P1
Aliases
SRD5AP1, DKFZp686G24110, SRD5A1P1
GeneMAGEA13P
Aliases
MAGEA13P
GeneLINC00889
Aliases
FLJ30672, LINC00889
GeneRPL36AP52
Aliases
dJ507I15.1
GeneLOC266694
GeneATP11C
probable phospholipid-transporting ATPase IG
phospholipid-transporting ATPase IG
phospholipid-transporting ATPase IG|probable phospholipid-transporting ATPase IG
ATPase IQ
ATPase IQ|phospholipid-transporting ATPase IG
OTTHUMP00000024161|OTTHUMP00000215065|OTTHUMP00000215081|phospholipid-transporting ATPase IG|probable phospholipid-transporting ATPase IG
OTTHUMP00000024161
P4-ATPase flippase complex alpha subunit ATP11C
hCG_1643963
OTTHUMP00000024161|phospholipid-transporting ATPase IG|probable phospholipid-transporting ATPase IG
OTTHUMP00000215065
OTTHUMP00000215081
Aliases
ATP11C, ATPIQ, ATPIG
GeneLINC00632
Aliases
LINC00632
GeneCXorf66
hypothetical protein LOC347487
RP11-35F15.2
secreted glycoprotein, X-linked
uncharacterized protein CXorf66
OTTHUMP00000024165
Aliases
CXorf66, SGPX
GeneLOC389895
GeneKRT8P6
Aliases
KRT8P6
GeneMIR504
Aliases
MIRN504, hsa-mir-504, MIR504
GeneMIR505
Aliases
MIRN505, MIR505, hsa-mir-505
GeneHNRNPA3P3
Aliases
HNRNPA3P3
GeneSNURFL
Aliases
CXorf19, SNURFL
GeneSPANXB1
OTTHUMP00000024171
OTTHUMP00000024171|SPAN-Xf|SPANX family member B/F|SPANX-F|cancer/testis antigen 11.2|cancer/testis antigen family 11, member 2|nuclear-associated protein SPAN-Xb|nuclear-associated protein SPAN-Xf|sperm protein associated with the nucleus on the X chromosome B/F|sperm protein associated with the nucleus, X chromosome, family member B1
SPANX family, member F1
SPANX family, member B2
SPANX family, member F2
nuclear-associated protein SPAN-Xb
SPANX-F
nuclear-associated protein SPAN-Xf
SPANX family member B/F
sperm protein associated with the nucleus on the X chromosome B/F
cancer/testis antigen 11.2
cancer/testis antigen family 11, member 2
sperm protein associated with the nucleus, X chromosome, family member B1
SPAN-Xf|SPANX-F|cancer/testis antigen 11.2|cancer/testis antigen family 11, member 2|nuclear-associated protein SPAN-Xb|sperm protein associated with the nucleus on the X chromosome B/F|sperm protein associated with the nucleus, X chromosome, family member B1
SPAN-Xf
cancer/testis antigen family 11, member 2|nuclear-associated protein SPAN-Xb|sperm protein associated with the nucleus, X chromosome, family member B1
SPAN-Xf|SPANX family member B/F|SPANX-F|cancer/testis antigen 11.2|cancer/testis antigen family 11, member 2|nuclear-associated protein SPAN-Xb|nuclear-associated protein SPAN-Xf|sperm protein associated with the nucleus on the X chromosome B/F|sperm protein associated with the nucleus, X chromosome, family member B1
Aliases
SPANX-B, SPANXB, B1, SPANXF2, CT11.2, SPANXF1, SPANXB2, SPANXB1
GeneFGF13-AS1
Aliases
FGF13-AS1
GeneLOC100130620
GeneRPS17P17
Aliases
RPS17_8_1818, RPS17P17
GeneMIR320D2
Aliases
MIR320D2, hsa-mir-320d-2, MIRN320D2, MIR320D-2
SNPrs10582136
SNPrs34975686
SNPrs59340869
SNPrs60539110
SNPrs111744319
SNPrs112537691
SNPrs146950436
SNPrs149623419
SNPrs183941570
SNPrs184028570
SNPrs185743583
SNPrs186772574
SNPrs186808571
SNPrs187500566
SNPrs188594580
SNPrs189166564
SNPrs189826583
SNPrs189887585
SNPrs190427562
SNPrs190834587
SNPrs190892564
SNPrs191388569
SNPrs191646576
SNPrs192474578
SNPrs193141564
SNPrs200438447
SNPrs201421241
GeneLOC101928833
SNPrs372944590
SNPrs373082845
SNPrs373366755
Chromosome
X
Position
138,631,573 - 139,222,889 (0.6M)
Orientation
-
Chromosome
X
Position
139,581,771 - 139,708,222 (126.5K)
Orientation
-
Chromosome
X
Position
140,091,667 - 140,092,911 (1,245bp)
Orientation
+
Chromosome
X
Position
140,397,057 - 140,398,539 (1,483bp)
Orientation
+
Chromosome
X
Position
140,709,759 - 140,772,677 (62,919bp)
Orientation
+
Chromosome
X
Position
141,002,591 - 141,003,706 (1,116bp)
Orientation
+
Chromosome
X
Position
138,487,668 - 138,488,912 (1,245bp)
Orientation
-
Chromosome
X
Position
138,614,731 - 138,617,638 (2,908bp)
Orientation
-
Chromosome
X
Position
139,530,733 - 139,565,697 (34,965bp)
Orientation
+
Chromosome
X
Position
139,720,579 - 139,720,775 (197bp)
Orientation
+
Chromosome
X
Position
139,726,346 - 139,933,033 (206.7K)
Orientation
-
Chromosome
X
Position
139,955,725 - 139,965,518 (9,794bp)
Orientation
-
Chromosome
X
Position
140,470,866 - 140,471,274 (409bp)
Orientation
-
Chromosome
X
Position
140,502,987 - 140,505,060 (2,074bp)
Orientation
-
Chromosome
X
Position
140,681,106 - 140,687,716 (6,611bp)
Orientation
-
Chromosome
X
Position
140,783,260 - 140,784,558 (1,299bp)
Orientation
-
Chromosome
X
Position
141,138,441 - 141,139,224 (784bp)
Orientation
+
Chromosome
X
Position
138,482,689 - 138,484,285 (1,597bp)
Orientation
+
Chromosome
X
Position
138,667,711 - 138,667,793 (83bp)
Orientation
-
Chromosome
X
Position
138,712,107 - 138,716,605 (4,499bp)
Orientation
+
Chromosome
X
Position
139,361,940 - 139,362,482 (543bp)
Orientation
+
Chromosome
X
Position
139,924,148 - 139,924,231 (84bp)
Orientation
-
Chromosome
X
Position
140,926,172 - 140,926,219 (48bp)
Orientation
-
Chromosome
X
Position
138,806,374 - 138,807,130 (757bp)
Orientation
+
Chromosome
X
Position
139,446,819 - 139,448,973 (2,155bp)
Orientation
+
Chromosome
X
Position
140,032,304 - 140,033,870 (1,567bp)
Orientation
+
Chromosome
X
Position
139,008,794 - 139,008,794 (1bp)
Chromosome
X
Position
140,259,135 - 140,259,135 (1bp)
Chromosome
X
Position
140,902,164 - 140,902,164 (1bp)
Chromosome
X
Position
140,939,455 - 140,939,455 (1bp)
Chromosome
X
Position
138,859,637 - 138,859,637 (1bp)
Chromosome
X
Position
140,079,597 - 140,079,597 (1bp)
Chromosome
X
Position
139,001,484 - 139,001,484 (1bp)
Chromosome
X
Position
139,946,376 - 139,946,376 (1bp)
Chromosome
X
Position
140,579,170 - 140,579,170 (1bp)
Chromosome
X
Position
139,607,813 - 139,607,813 (1bp)
Chromosome
X
Position
140,267,622 - 140,267,622 (1bp)
Chromosome
X
Position
140,802,980 - 140,802,980 (1bp)
Chromosome
X
Position
139,467,757 - 139,467,757 (1bp)
Chromosome
X
Position
138,643,989 - 138,643,989 (1bp)
Chromosome
X
Position
138,837,587 - 138,837,587 (1bp)
Chromosome
X
Position
141,131,687 - 141,131,687 (1bp)
Chromosome
X
Position
138,336,745 - 138,336,745 (1bp)
Chromosome
X
Position
141,090,801 - 141,090,801 (1bp)
Chromosome
X
Position
139,766,614 - 139,766,615 (2bp)
Chromosome
X
Position
139,170,520 - 139,170,520 (1bp)
Chromosome
X
Position
141,153,353 - 141,153,353 (1bp)
Chromosome
X
Position
140,193,108 - 140,193,109 (2bp)
Chromosome
X
Position
138,233,192 - 138,233,192 (1bp)
Chromosome
X
Position
140,114,580 - 140,114,580 (1bp)
Chromosome
X
Position
139,813,962 - 139,813,962 (1bp)
Chromosome
X
Position
140,726,636 - 140,726,636 (1bp)
Chromosome
X
Position
139,870,707 - 139,870,707 (1bp)
Chromosome
X
Position
138,517,678 - 138,517,678 (1bp)
Chromosome
X
Position
138,522,755 - 138,522,755 (1bp)
Chromosome
X
Position
140,392,577 - 140,392,577 (1bp)
Symbol
FGF13
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
fibroblast growth factor 13
Symbol
MCF2
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27
Description
MCF.2 cell line derived transforming sequence
Symbol
LOC389895
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
chromosome 16 open reading frame 72-like
Symbol
LOC266694
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
embryonic ectoderm development pseudogene
Symbol
LINC00632
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
long intergenic non-protein coding RNA 632
Symbol
SPANXB1
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
SPANX family, member B1
Symbol
KRT8P6
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
keratin 8 pseudogene 6
Symbol
LINC00889
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
long intergenic non-protein coding RNA 889
Symbol
F9
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1-q27.2
Description
coagulation factor IX
Symbol
BCYRN1P1
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
brain cytoplasmic RNA 1, pseudogene 1
Symbol
ATP11C
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
ATPase, class VI, type 11C
Symbol
CXorf66
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
chromosome X open reading frame 66
Symbol
RPS17P17
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
ribosomal protein S17 pseudogene 17
Symbol
SOX3
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
SRY (sex determining region Y)-box 3
Symbol
LOC101928833
Evidence code
mRNA
Cytogenetic coordinates
Xq27.1
Description
uncharacterized LOC101928833
Symbol
CDR1
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
cerebellar degeneration-related protein 1, 34kDa
Symbol
RPL36AP52
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
ribosomal protein L36a pseudogene
Symbol
MAGEA13P
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
melanoma antigen family A, 13 pseudogene
Symbol
MIR504
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
microRNA 504
Symbol
FGF13-AS1
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
FGF13 antisense RNA 1
Symbol
SNURFL
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27
Description
SNRPN upstream reading frame-like, pseudogene
Symbol
MIR505
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
microRNA 505
Symbol
MIR320D2
Evidence code
best RefSeq
Cytogenetic coordinates
 
Description
microRNA 320d-2
Symbol
LOC100130620
Evidence code
best RefSeq
Cytogenetic coordinates
Xq26.3
Description
tropomyosin 1 (alpha) pseudogene
Symbol
SRD5A1P1
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
steroid-5-alpha-reductase, alpha polypeptide 1 pseudogene 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha pseudogene)
Symbol
HNRNPA3P3
Evidence code
best RefSeq
Cytogenetic coordinates
Xq27.1
Description
heterogeneous nuclear ribonucleoprotein A3 pseudogene 3
refSNP ID: rs183941570
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: FGF13;2258;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs201421241
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs111744319
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs190427562
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs146950436
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: FGF13;2258;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs185743583
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs373366755
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: FGF13;2258;intron
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs190892564
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs149623419
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs190834587
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: MCF2;4168;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs188594580
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.06)
Validated
No genotypes available
No submitter links
refSNP ID: rs10582136
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs191388569
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs191646576
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: FGF13;2258;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs186808571
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: FGF13;2258;intron
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs193141564
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs200438447
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs189826583
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs112537691
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: ATP11C;286410;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.02(0.09)
Validated
Genotypes available: link
Submitter links available
refSNP ID: rs192474578
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: FGF13;2258;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs189166564
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs34975686
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs189887585
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.06)
Validated
No genotypes available
No submitter links
refSNP ID: rs373082845
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs187500566
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: ATP11C;286410;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs184028570
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: LINC00632;286411;intron
Not in known transcript
Not in known coding region
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs186772574
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: ATP11C;286410;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.07)
Validated
No genotypes available
No submitter links
refSNP ID: rs372944590
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs60539110
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.03(0.13)
Validated
No genotypes available
No submitter links
refSNP ID: rs59340869
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.05(0.14)
Validated
Genotypes available: link
No submitter links

Reloading....