NCBI
Human genome overview page (Annotation Release 106)
Human genome overview page (Annotation Release 105)
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Region Shown:

Homo sapiens (human)  Annotation Release 106 (Current)BLAST human sequences
Chromosome: 1 2 [ 3 ] 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y MT
Query: ARL13B    [clear]
 Master Map: Phenotype (includes QTLs) Summary of Maps mapsnoptions.gif 
Region Displayed: 92M-96M bp   Download/View Sequence/Evidence

Summary of Maps:
Map 1: VariationTable View
Region Displayed: 92M-96M bp   Download/View Sequence/Evidence
Total Variations On Chromosome: 4120051 [134 not localized]
Variations Labeled: 30 Total Variations in Region: 30
Map 2: Genes On SequenceTable View
Region Displayed: 92M-96M bp   Download/View Sequence/Evidence
Total Genes On Chromosome: 2203 [3 not localized]
Genes Labeled: 13 Total Genes in Region: 13
Map 3: Phenotype (includes QTLs)Table View
Region Displayed: 92M-96M bp   Download/View Sequence/Evidence
Total Phenotypes On Chromosome: 204
Phenotypes Labeled: 5 Total Phenotypes in Region: 5
GenePROS1
OTTHUMP00000197145
OTTHUMP00000197145|OTTHUMP00000197146|protein Sa|vitamin K-dependent plasma protein S|vitamin K-dependent protein S
hCG_1790803
vitamin K-dependent protein S
protein S, alpha
protein Sa
vitamin K-dependent plasma protein S
protein S, alpha|protein Sa|vitamin K-dependent plasma protein S
protein Sa|vitamin K-dependent plasma protein S|vitamin K-dependent protein S
OTTHUMP00000197146|protein Sa|vitamin K-dependent plasma protein S|vitamin K-dependent protein S
OTTHUMP00000197146
Aliases
THPH5, THPH6, PS24, PROS1, PSA, PS21, PS23, PS25, PS22, PROS
GeneNSUN3
NOL1/NOP2/Sun domain family 3
NOL1/NOP2/Sun domain family member 3
OTTHUMP00000213873
hCG_1777126
NOL1/NOP2/Sun domain family 3|NOL1/NOP2/Sun domain family member 3|NOL1/NOP2/Sun domain family, member 3|OTTHUMP00000213873|putative methyltransferase NSUN3
putative methyltransferase NSUN3
NOL1/NOP2/Sun domain family, member 3
NOL1/NOP2/Sun domain family 3|NOL1/NOP2/Sun domain family, member 3
NOL1/NOP2/Sun domain family 3|NOL1/NOP2/Sun domain family member 3|NOL1/NOP2/Sun domain family, member 3|putative methyltransferase NSUN3
Aliases
MST077, FLJ22109, NSUN3, MSTP077, FLJ22609
GeneARL13B
ADP-ribosylation factor-like 2-like 1|ADP-ribosylation factor-like protein 13B|ARL2-like protein 1|OTTHUMP00000213855|OTTHUMP00000213858|OTTHUMP00000213859
hCG_26825
OTTHUMP00000213858
OTTHUMP00000213855
OTTHUMP00000213859
ARL2-like protein 1
ADP-ribosylation factor-like protein 2-like 1
ADP-ribosylation factor-like protein 13B
ADP-ribosylation factor-like 2-like 1|ADP-ribosylation factor-like protein 13B|ARL2-like protein 1
ADP-ribosylation factor-like 2-like 1
ADP-ribosylation factor-like 2-like 1|ADP-ribosylation factor-like protein 13B|ADP-ribosylation factor-like protein 2-like 1|ARL2-like protein 1
Aliases
DKFZp761H079, DKFZp686M2074, DKFZp686L2472, JBTS8, DKFZp686E2075, MGC120611, MGC120612, ARL2L1, ARL13B
GeneDHFRL1
OTTHUMP00000213864|dihydrofolate reductase pseudogene 4|dihydrofolate reductase-like protein 1
OTTHUMP00000213865
OTTHUMP00000213866
OTTHUMP00000213865|OTTHUMP00000213866|dihydrofolate reductase pseudogene 4|dihydrofolate reductase-like protein 1
hCG_1640067
OTTHUMP00000213863
OTTHUMP00000213864
dihydrofolate reductase, mitochondrial
dihydrofolate reductase-like protein 1
dihydrofolate reductase pseudogene 4|dihydrofolate reductase-like protein 1
dihydrofolate reductase pseudogene 4
Aliases
DHFRL1, DHFRP4, FLJ16119
GeneLINC00879
Aliases
RP11-118N24.3, LINC00879
GeneARMC10P1
Aliases
ARMC10P1
GeneSTX19
OTTHUMP00000213862
OTTHUMP00000213862|syntaxin-19
hCG_1644250
syntaxin-19
Aliases
STX19, MGC21382
GeneWDR82P1
Aliases
SW2, SWD2, WDR82P1, WDR82, WDR82B, hCG26824
GeneHMGN1P7
Aliases
HMGN1P7
GeneRPS18P6
Aliases
RPS18P6, RPS18_3_386
GeneMTHFD2P1
Aliases
FLJ34909, MTHFD2P1
GeneRBBP4P2
Aliases
RBBP4P2
SNPrs1447853
SNPrs7610499
SNPrs9871123
SNPrs34217689
SNPrs35197690
SNPrs41267005
SNPrs80140734
SNPrs111787907
SNPrs111941211
SNPrs117104492
SNPrs140337056
SNPrs141856233
SNPrs142070231
SNPrs142097234
SNPrs142967234
SNPrs145124418
SNPrs147694431
SNPrs147877437
SNPrs149160411
SNPrs181810571
SNPrs183109571
SNPrs185617562
SNPrs185837572
SNPrs192764571
SNPrs192851578
SNPrs192987582
GeneLOC101930347
SNPrs368716690
SNPrs369830619
SNPrs370729116
Chromosome
3
Position
93,760,919 - 93,764,033 (3,115bp)
Orientation
+
Chromosome
3
Position
93,873,037 - 93,974,090 (101.1K)
Orientation
-
Chromosome
3
Position
93,980,139 - 94,055,678 (75,540bp)
Orientation
+
Chromosome
3
Position
93,987,946 - 93,989,062 (1,117bp)
Orientation
-
Chromosome
3
Position
94,014,234 - 94,028,616 (14,383bp)
Orientation
-
Chromosome
3
Position
94,057,922 - 94,063,223 (5,302bp)
Orientation
-
Chromosome
3
Position
94,063,011 - 94,126,786 (63,776bp)
Orientation
+
Chromosome
3
Position
94,075,911 - 94,077,174 (1,264bp)
Orientation
-
Chromosome
3
Position
94,505,538 - 94,507,650 (2,113bp)
Orientation
-
Chromosome
3
Position
94,935,599 - 94,938,284 (2,686bp)
Orientation
-
Chromosome
3
Position
94,938,263 - 94,991,328 (53,066bp)
Orientation
+
Chromosome
3
Position
95,172,096 - 95,172,377 (282bp)
Orientation
+
Chromosome
3
Position
95,654,423 - 95,683,193 (28,771bp)
Orientation
-
Chromosome
3
Position
94,734,793 - 94,734,793 (1bp)
Chromosome
3
Position
95,100,230 - 95,100,230 (1bp)
Chromosome
3
Position
95,158,737 - 95,158,738 (2bp)
Chromosome
3
Position
94,760,703 - 94,760,703 (1bp)
Chromosome
3
Position
95,413,709 - 95,413,709 (1bp)
Chromosome
3
Position
94,119,643 - 94,119,643 (1bp)
Chromosome
3
Position
95,668,063 - 95,668,063 (1bp)
Chromosome
3
Position
94,331,315 - 94,331,315 (1bp)
Chromosome
3
Position
94,839,064 - 94,839,064 (1bp)
Chromosome
3
Position
95,239,711 - 95,239,711 (1bp)
Chromosome
3
Position
95,580,794 - 95,580,794 (1bp)
Chromosome
3
Position
94,015,200 - 94,015,200 (1bp)
Chromosome
3
Position
93,957,617 - 93,957,617 (1bp)
Chromosome
3
Position
94,608,520 - 94,608,520 (1bp)
Chromosome
3
Position
94,946,721 - 94,946,721 (1bp)
Chromosome
3
Position
94,134,879 - 94,134,879 (1bp)
Chromosome
3
Position
94,232,706 - 94,232,706 (1bp)
Chromosome
3
Position
95,607,937 - 95,607,937 (1bp)
Chromosome
3
Position
94,060,095 - 94,060,095 (1bp)
Chromosome
3
Position
94,101,990 - 94,101,990 (1bp)
Chromosome
3
Position
94,249,064 - 94,249,064 (1bp)
Chromosome
3
Position
95,940,133 - 95,940,133 (1bp)
Chromosome
3
Position
94,542,554 - 94,542,554 (1bp)
Chromosome
3
Position
94,069,838 - 94,069,838 (1bp)
Chromosome
3
Position
95,438,070 - 95,438,075 (6bp)
Chromosome
3
Position
93,898,483 - 93,898,483 (1bp)
Chromosome
3
Position
94,761,005 - 94,761,005 (1bp)
Chromosome
3
Position
95,589,230 - 95,589,230 (1bp)
Chromosome
3
Position
95,066,119 - 95,066,119 (1bp)
Symbol
LOC101930347
Evidence code
protein
Cytogenetic coordinates
 
Description
collagen alpha-2(I) chain-like
Symbol
PROS1
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
protein S (alpha)
Symbol
ARL13B
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.1
Description
ADP-ribosylation factor-like 13B
Symbol
HMGN1P7
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
high mobility group nucleosome binding domain 1 pseudogene 7
Symbol
STX19
Evidence code
best RefSeq
Cytogenetic coordinates
3q11
Description
syntaxin 19
Symbol
DHFRL1
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.1
Description
dihydrofolate reductase-like 1
Symbol
NSUN3
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.1
Description
NOP2/Sun domain family, member 3
Symbol
RBBP4P2
Evidence code
best RefSeq
Cytogenetic coordinates
 
Description
retinoblastoma binding protein 4 pseudogene 2
Symbol
ARMC10P1
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
armadillo repeat containing 10 pseudogene 1
Symbol
WDR82P1
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
WD repeat domain 82 pseudogene 1
Symbol
LINC00879
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
long intergenic non-protein coding RNA 879
Symbol
RPS18P6
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
ribosomal protein S18 pseudogene 6
Symbol
MTHFD2P1
Evidence code
best RefSeq
Cytogenetic coordinates
3q11.2
Description
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1
refSNP ID: rs111941211
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
Genotypes available: link
Submitter links available
refSNP ID: rs183109571
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs35197690
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs192987582
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.02)
Validated
No genotypes available
No submitter links
refSNP ID: rs142967234
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs192764571
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: NSUN3;63899;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.02)
Validated
No genotypes available
No submitter links
refSNP ID: rs117104492
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: MTHFD2P1;100287639;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.03(0.11)
Validated
No genotypes available
No submitter links
refSNP ID: rs368716690
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs9871123
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.21(0.25)
Validated
Genotypes available: link
No submitter links
refSNP ID: rs142070231
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs142097234
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.04)
Validated
No genotypes available
No submitter links
refSNP ID: rs145124418
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: ARL13B;200894;intron;STX19;415117;missense
Transcript regions: NM_001001850;XM_005247455;XM_005247456
Coding regions: NP_001001850;missense;XP_005247512;missense;XP_005247513;missense
Het(S.E.)=0.01(0.05)
Validated
No genotypes available
No submitter links
refSNP ID: rs147694431
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: PROS1;5627;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.05)
Validated
No genotypes available
No submitter links
refSNP ID: rs141856233
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs7610499
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: LINC00879;255025;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.07)
Validated
Genotypes available: link
Submitter links available
refSNP ID: rs149160411
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.05)
Validated
No genotypes available
No submitter links
refSNP ID: rs34217689
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.29(0.25)
Validated
Genotypes available: link
Submitter links available
refSNP ID: rs140337056
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs370729116
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: DHFRL1;200895;UTR-3
Transcript regions: NM_001195643;UTR;NM_176815;UTR
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs185837572
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: NSUN3;63899;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.05)
Validated
No genotypes available
No submitter links
refSNP ID: rs181810571
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.03)
Validated
No genotypes available
No submitter links
refSNP ID: rs192851578
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.01(0.05)
Validated
No genotypes available
No submitter links
refSNP ID: rs369830619
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het unknown
Success rate is undefined
No genotypes available
No submitter links
refSNP ID: rs80140734
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: NSUN3;63899;intron
Not in known transcript
Not in known coding region
Het(S.E.)=0.03(0.12)
Validated
No genotypes available
No submitter links
refSNP ID: rs147877437
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.49(0.07)
Validated
No genotypes available
No submitter links
refSNP ID: rs41267005
Map Counts: CH: 1, NT: 1, TOT: 1
Locus regions: PROS1;5627;missense
Transcript regions: NM_000313;XM_005247626
Coding regions: NP_000304;missense;XP_005247683;missense
Het unknown
Validated
No genotypes available
No submitter links
refSNP ID: rs1447853
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.45(0.16)
Validated
Genotypes available: link
Submitter links available
refSNP ID: rs111787907
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.02(0.09)
Validated
Genotypes available: link
Submitter links available
refSNP ID: rs185617562
Map Counts: CH: 1, NT: 1, TOT: 1
Not in known locus
Not in known transcript
Not in known coding region
Het(S.E.)=0.00(0.02)
Validated
No genotypes available
No submitter links

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