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| Status |
Public on Jun 12, 2007 |
| Title |
Me3K27 Histone H3 ChIP DNA from HeLa S3 cells |
| Project |
Pilot ENCODE
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| Organism(s) |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
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| Summary |
Me3K27 Histone H3 ChIP DNA was isolated from HeLa S3 cells and surveyed for binding in the ENCODE regions on NimbleGen ENCODE arrays. Use of this data requires permission from its producers.
Keywords: ChIP-chip
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| Overall design |
Me3K27 Histone H3-ChIP DNA and reference ChIP DNA (background obtained with normal rabbit IgG) were isolated from untreated HeLa S3 cells. Combined Me3K27 Histone H3 and reference ChIP DNA samples were hybridized to a NimbleGen ENCODE tiling array that contains overlapping 50nt oligonucleotide probes. The series is comprised of three biological replicates, hybridized separately to three arrays.
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| Web Link |
http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
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| Contributor(s) |
Euskirchen G, Zhong G, Rozowsky JS, Gerstein MB, Snyder MP |
| Submission date |
Jun 09, 2007 |
| Contact name |
Guoneng Zhong |
| E-mail(s) |
guoneng.zhong@yale.edu
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| Organization name |
Yale Med
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| Street address |
300 George St
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| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06511 |
| Country |
USA |
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| Platforms (1) |
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| Samples (3) |
| GSM199995 |
Me3K27 Histone H3 ChIP-ChIP from HeLa S3 Cells applied to the NimbleGen ENCODE Array; [unpublished] Sample 1 |
| GSM199996 |
Me3K27 Histone H3 ChIP-ChIP from HeLa S3 Cells applied to the NimbleGen ENCODE Array; [unpublished] Sample 2 |
| GSM199997 |
Me3K27 Histone H3 ChIP-ChIP from HeLa S3 Cells applied to the NimbleGen ENCODE Array; [unpublished] Sample 3 |
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