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| Status |
Public on Dec 31, 2015 |
| Title |
Auxin-independent NAC pathway regulates cell wall metabolism in response to explant-specific wounding during regeneration in Arabidopsis II |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In this study, through a genome-wide transcriptome analysis of wounding in the leaf explant, we identified NAC1 (petunia NAM and Arabidopsis ATAF1, ATAF2, and CUC2) family transcription factor gene that acts in response to wounding and functions in regulation of cell wall metabolism.
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| Overall design |
RNA-Seq analysis of the wound site of leaf explants and leaf residu
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| Contributor(s) |
Chen X, Cheng J, Zhang G |
| Citation(s) |
26850273 |
| Submission date |
Nov 02, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Lin XU |
| E-mail(s) |
xulin01@sibs.ac.cn
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| Phone |
86-21-54924101
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| Organization name |
Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences
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| Department |
Chinese Academy of Sciences
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| Street address |
300 Fenglin Road
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| City |
Shanghai |
| ZIP/Postal code |
200032 |
| Country |
China |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE74587 |
Auxin-independent NAC pathway regulates cell wall metabolism in response to explant-specific wounding during regeneration in Arabidopsis |
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| Relations |
| BioProject |
PRJNA300876 |
| SRA |
SRP065615 |
