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| Status |
Public on Apr 06, 2007 |
| Title |
ENCODE Transcript Mapping for Human HeLa Poly(A)+ RNA |
| Project |
Pilot ENCODE
|
| Organism(s) |
Homo sapiens |
| Experiment type |
Expression profiling by genome tiling array
|
| Summary |
Transcript Mapping on Affymetrix ENCODE arrays for 3 different biological replicates of HeLa Poly(A)+ RNA
Keywords: other
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| Overall design |
Experiments were done with 3 biological replicate samples each hybridized to replicates arrays in parallel. Array data was processed by combining the replicate arrays and integrating data using sliding genomic windows.
|
| Web Link |
http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
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| Contributor(s) |
Rozowsky JS, Lian Z, Kapranov P, Emanuelsson O, Nagalakshmi U, Urban AE, Cheung J, Weissman S, Gerstein M, Gingeras T, Zhong G, Snyder MP |
| Submission date |
Apr 03, 2007 |
| Contact name |
Guoneng Zhong |
| E-mail(s) |
guoneng.zhong@yale.edu
|
| Organization name |
Yale Med
|
| Street address |
300 George St
|
| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06511 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL3111 |
Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 |
|
| Samples (3) |
| GSM180107 |
Transcript Mapping for Human HeLa Poly(A)+ RNA Sample 1 |
| GSM180109 |
Transcript Mapping for Human HeLa Poly(A)+ RNA Sample 2 |
| GSM180111 |
Transcript Mapping for Human HeLa Poly(A)+ RNA Sample 3 |
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