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Series GSE40069 Query DataSets for GSE40069
Status Public on Aug 13, 2015
Title The Small Molecule Genistein Increases Hepcidin Expression in Human Hepatocytes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Hepcidin, a peptide hormone that decreases intestinal iron absorption and macrophage iron release, is a potential drug target for patients with iron overload syndromes because its levels are inappropriately low in these individuals. Endogenous stimulants of Hepcidin transcription include bone morphogenic protein 6 (BMP) and interleukin-6 (IL-6) via effects on Smad4 or Stat3, respectively. We conducted a small-scale chemical screen in zebrafish embryos to identify small molecules that modulate hepcidin expression. We found that treatment with the isoflavone genistein from 28−52 hours post-fertilization in zebrafish embryos enhanced Hepcidin transcript levels as assessed by whole mount in situ hybridization and quantitative realtime RT-PCR. Genistein’s stimulatory effect was conserved in human hepatocytes: genistein treatment of HepG2 cells increased both Hepcidin transcript levels and Hepcidin promoter activity. We found that genistein’s effect on Hepcidin expression did not depend on estrogen receptor signaling or increased cellular iron uptake, but was impaired by mutation of either the BMP response elements or the Stat3 binding site in the Hepcidin promoter. RNA-sequencing of transcripts from genistein-treated hepatocytes indicated that genistein upregulated 68% of the transcripts that were upregulated by BMP6, however genistein raised the levels of several transcripts involved in Stat3 signaling that were not upregulated by BMP6. Chromatin-immunoprecipitation and ELISA experiments revealed that genistein enhanced Stat3 binding to the Hepcidin promoter and increased phosphorylation of Stat3 in HepG2 cells. CONCLUSION: Genistein is the first small molecule experimental drug that stimulates Hepcidin expression in vivo and in vitro. These experiments demonstrate the feasibility of identifying and characterizing small molecules that increase Hepcidin expression. Genistein and other candidate molecules may subsequently be developed into new therapies for iron overload syndromes.
 
Overall design RNA-seq of HepG2 cells treated with DMSO 1%, BMP6 50 ng/ml, or genistein 10 micromolar. The numbers of biological replicates were 3, 2, and 3.
 
Contributor(s) Zhen AW, Nguyen NH, Gibert Y, Motola S, Buckett P, Wesling-Resnick M, Fraenkel E, Fraenkel PG
Citation(s) 23703590
Submission date Aug 13, 2012
Last update date Oct 31, 2023
Contact name Paula Goodman Fraenkel
E-mail(s) pfraenke@bidmc.harvard.edu
Organization name Beth Israel Deaconess Medical Center
Department Division of Hematology/Oncology
Street address 330 Brookline Avenue, SLD 423B
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (8)
GSM984644 RNA-seq_Control_rep1
GSM984645 RNA-seq_Control_rep2
GSM984646 RNA-seq_Control_rep3
Relations
BioProject PRJNA172723
SRA SRP014790

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Supplementary file Size Download File type/resource
GSE40069_KEGG_pathway_analysis.pdf.gz 101.3 Kb (ftp)(http) PDF
GSE40069_RAW.tar 3.7 Mb (http)(custom) TAR (of TXT)
GSE40069_Sequences_of_primers_and_probes.pdf.gz 245.1 Kb (ftp)(http) PDF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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