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Series GSE17793 Query DataSets for GSE17793
Status Public on Aug 25, 2009
Title Expression Profiling in Subcellular Compartments of Human Cell Line K562
Project ENCODE
Organism(s) Homo sapiens
Experiment type Expression profiling by array
Summary These samples are part of the ENCODE consortium’s proposed time-limited Pilot Study for confirmation of the utility of RNA abundance measurements as a standard reference phenotyping tool.
Affy expression profiling of Subcellular RNA from ENCODE cell line K562

Keywords: cell fraction comparison

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
 
Overall design RNA samples from a single biological replicate
Web Link http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
 
Contributor(s) Davis C, Chittur SV, Tenenbaum SA
Submission date Aug 25, 2009
Contact name Sridar Chittur
E-mail(s) schittur@albany.edu
Phone 518-591-7215
Organization name SUNY-University at Albany
Department Center for Functional Genomics
Lab Microarray Core
Street address One Discovery Drive, CRC 342G
City Rensselaer
State/province NY
ZIP/Postal code 12144
Country USA
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (9)
GSM444072 CSHL_1_K562_Total
GSM444073 CSHL_2_K562_Aplus
GSM444074 CSHL_3_K562_Aminus

Download family Format
SOFT formatted family file(s) SOFT
MINiML formatted family file(s) MINiML
Series Matrix File(s) TXT

Supplementary file Size Download File type/resource
GSE17793_RAW.tar 212.1 Mb (ftp)(http) TAR (of CEL, CHP)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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