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Platform GPL4648 Query DataSets for GPL4648
Status Public on Dec 13, 2006
Title Galbraith Laboratory Operon Long Oligonucleotide Microarray Version 1.0 (AtOligo 2.6.2.Y)
Technology type spotted oligonucleotide
Distribution non-commercial
Organism(s) Arabidopsis thaliana
Manufacturer The Galbraith Laboratory, University of Arizona
Manufacture protocol GeneMachines, Omnigrid
Support glass
Coating aminosilane
 
Description This oligonucleotide array is produced from the Operon Version 1.0 Array-Ready Oligo set (AROS). The Arabidopsis V1.0 AROS is designed from UniGene Build At. #4 (www.operon.com). This set comprises 26,000 oligonucleotides. Additional elements are printed as controls. This platform represents slides AtOligo 2.6.2.1-AtOligo 2.6.2.100 (http://www.ag.arizona.edu/microarray).
 
Contributor(s) Galbraith DW
Submission date Dec 07, 2006
Contact name David William Galbraith
E-mail(s) galbraith@arizona.edu
Phone 520-621-9153
URL http://latin.arizona.edu/galbraith
Organization name University of Arizona
Department Plant Sciences and Bio5 Institute
Lab Galbraith
Street address 303 Forbes Building
City Tucson
State/province AZ
ZIP/Postal code 85721
Country USA
 

Data table header descriptions
ID
Locus_Name Chromosomal based gene locus names
Oligo_ID Assigned by OPERON, or by STRATAGENE or the Galbraith Lab (control elements)
Description Description of the gene locus
ORF
SPOT_ID

Data table
ID Locus_Name Oligo_ID Description ORF SPOT_ID
1_01_01 At5g46430 AY042872 ribosomal protein L32; protein id: At5g46430.1 At5g46430
1_01_02 At1g64740 M21414 alpha-tubulin, putative; protein id: At1g64740.1 At1g64740
1_01_03 At5g46430 AY042872 ribosomal protein L32; protein id: At5g46430.1 At5g46430
1_01_04 At1g64740 M21414 alpha-tubulin, putative; protein id: At1g64740.1 At1g64740
1_01_05 At5g46430 AY042872 ribosomal protein L32; protein id: At5g46430.1 At5g46430
1_01_06 At1g64740 M21414 alpha-tubulin, putative; protein id: At1g64740.1 At1g64740
1_01_07 At5g46430 AY042872 ribosomal protein L32; protein id: At5g46430.1 At5g46430
1_01_08 At1g64740 M21414 alpha-tubulin, putative; protein id: At1g64740.1 At1g64740
1_01_09 At1g12470 AC025416 hypothetical protein; protein id: At1g12470.1 At1g12470
1_01_10 At1g05220 AC000098 hypothetical protein; protein id: At1g05220.1 At1g05220
1_01_11 At1g23040 AF000657 expressed protein; protein id: At1g23040.1 At1g23040
1_01_12 At1g31390 AC007654 hypothetical protein; protein id: At1g31390.1 At1g31390
1_01_13 At3g29800 AP000736 mitochondrial protein-like; contains similarity to AAA-type ATPase; protein id: At3g29800.1 At3g29800
1_01_14 At1g80470 AC018849 F-box protein; protein id: At1g80470.1 At1g80470
1_01_15 At1g23100 AC002311 10kDa chaperonin (CPN10), putative; protein id: At1g23100.1 At1g23100
1_01_16 At1g12520 AF179371 copper/zinc superoxide dismutase copper chaperone, putative; protein id: At1g12520.1 At1g12520
1_01_17 At1g35400 AC023064 hypothetical protein; protein id: At1g35400.1 At1g35400
1_01_18 At1g73790 AC012679 expressed protein; protein id: At1g73790.1 At1g73790
1_01_19 At1g30010 AC022455 unknown protein; protein id: At1g30010.1 At1g30010
1_01_20 At1g41790 AC022456 T4I21.8; pseudogene, Gypsy Ty-3 element (fragment) At1g41790

Total number of rows: 28800

Table truncated, full table size 2452 Kbytes.




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