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Platform GPL16 Query DataSets for GPL16
Status Public on Jul 30, 2001
Title ecoli_3.0
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism(s) Escherichia coli
 
Description A microarray with 5760 spot features.
Tip Configuration: Standard 16-tip
Columns per Sector: 18
Rows per Sector: 20
Column Spacing: 1.1
Row Spacing: 1.1
 
Submission date Jul 30, 2001
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (11) GSM555, GSM557, GSM558, GSM559, GSM560, GSM561 
Series (2)
GSE7 Tryptophan metabolism response in E. coli
GSE8 Topoisomerase function in E. coli replication fork movement

Data table header descriptions
ID
ORF open reading frame identifier
SPOT_ID
GENE_SYMBOL name of the gene represented by the sequence in the spot/feature
GENE_DESC description of the gene represented by the sequence in the spot/feature
SECTOR spot sector grid coordinate
SECTORROW spot row grid coordinate
SECTORCOL spot column grid coordinate
PLATE clone plate identifier
PROW clone plate row
PCOL clone plate column
FAILED
IS_CONTAMINATED

Data table
ID ORF SPOT_ID GENE_SYMBOL GENE_DESC SECTOR SECTORROW SECTORCOL PLATE PROW PCOL FAILED IS_CONTAMINATED
1 GENOMIC GENOMIC 1 1 1 1 A 1 0 U
2 GENOMIC GENOMIC 1 1 2 1 A 5 0 U
3 GENOMIC GENOMIC 1 1 3 1 A 9 0 U
4 GENOMIC GENOMIC 1 1 4 1 A 13 0 U
5 GENOMIC GENOMIC 1 1 5 1 A 17 0 U
6 GENOMIC GENOMIC 1 1 6 1 A 21 0 U
7 EMPTY EMPTY 1 1 7 1 E 1 0 U
8 EMPTY EMPTY 1 1 8 1 E 5 0 U
9 EMPTY EMPTY 1 1 9 1 E 9 0 U
10 EMPTY EMPTY 1 1 10 1 E 13 0 U
11 EMPTY EMPTY 1 1 11 1 E 17 0 U
12 EMPTY EMPTY 1 1 12 1 E 21 0 U
13 EMPTY EMPTY 1 1 13 1 I 1 0 U
14 EMPTY EMPTY 1 1 14 1 I 5 0 U
15 EMPTY EMPTY 1 1 15 1 I 9 0 U
16 EMPTY EMPTY 1 1 16 1 I 13 0 U
17 EMPTY EMPTY 1 1 17 1 I 17 0 U
18 EMPTY EMPTY 1 1 18 1 I 21 0 U
19 EMPTY EMPTY 1 2 1 1 M 1 0 U
20 EMPTY EMPTY 1 2 2 1 M 5 0 U

Total number of rows: 5760

Table truncated, full table size 369 Kbytes.






Download family Format
SOFT formatted family file(s) SOFT
MINiML formatted family file(s) MINiML

Supplementary data files not provided
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