NCBI

Find a TPF

Join Legend: Click on the colored ball in the 'join' column to see alignment details.

tpf view for chr 22 (reference)
acc name ctg center status join align length gaps % id comments
GAP TELOMERE 10000  
GAP SHORT-ARM 12990000  
GAP CENTROMERE 3000000  
GAP type-3    
AP000522.1 LA16c-4G1 Hschr22_ctg2 Keio unk joingreen 2272 0 100  
AP000523.1 LA16c-60H5 Hschr22_ctg2 Keio unk joinyellow 473 0 100 alignment length < 2000
AP000524.1 LA16c-70D1 Hschr22_ctg2 Keio unk joinyellow 845 0 99.763 alignment length < 2000
AP000525.1 ? Hschr22_ctg2 Keio unk joingreen 22649 0 100  
AP000526.1 ? Hschr22_ctg2 Keio unk joingreen 7213 0 99.889  
AP000527.1 LA16c-83F12 Hschr22_ctg2 Keio unk joinred 6257 1 99.888 >0 gap of 50bp or more, not simple sequence
AP000528.1 LA16c-91G6 Hschr22_ctg2 Keio unk joingreen 6549 0 100  
AP000529.1 LA16c-3G11 Hschr22_ctg2 Keio unk joinyellow 12350 5 99.555 identity < 99.6%
CR545463.2 WI2-1690I13 Hschr22_ctg2 SC fin joinyellow 22509 13 99.529 identity < 99.6%
AP000530.1 LA16c-65E1 Hschr22_ctg2 Keio unk joingreen 12538 2 99.920 simple sequence in gap
AP000531.1 LA16c-59E1 Hschr22_ctg2 Keio unk joingreen 7997 0 100  
AP000532.1 LA16c-2F2 Hschr22_ctg2 Keio unk joingreen 2489 0 99.880  
AP000533.1 LA16c-60G3 Hschr22_ctg2 Keio unk joingreen 2499 1 100 simple sequence in gap
AP000534.1 LA16c-23H5 Hschr22_ctg2 Keio unk joingreen 4726 0 99.958  
AP000535.1 LA16c-58F10 Hschr22_ctg2 Keio unk joingreen 5211 0 100  
AP000536.1 LA16c-64C8 Hschr22_ctg2 Keio unk joingreen 6784 0 100  
AP000537.1 LA16c-54B2 Hschr22_ctg2 Keio unk joingreen 15491 0 100  
AP000538.1 LA16c-65B12 Hschr22_ctg2 Keio unk joinyellow 10138 1 99.921 >0 gap of 25bp or more, not simple sequence
AP000539.1 LA16c-72E11 Hschr22_ctg2 Keio unk joingreen 18531 0 100  
AP000540.2 LA16c-53D1 Hschr22_ctg2 Keio unk joingreen 2677 0 100  
AP000541.1 LA16c-13E4 Hschr22_ctg2 Keio unk joingreen 8599 2 99.837 simple sequence in gap
AP000542.1 LA16c-60D12 Hschr22_ctg2 Keio unk
? CH17-75M22 Hschr22_ctg2  
GAP type-3    
? ABC7-42382200G16 Hschr22_ctg3  
AP000543.1 LA16c-20H12 Hschr22_ctg3 Keio unk joinyellow 19023 10 99.595 >0 gap of 25bp or more, not simple sequence; identity < 99.6%
AP000544.1 LA16c-17H1 Hschr22_ctg3 Keio unk joingreen 4337 0 99.977  
AP000545.1 LA16c-68B10 Hschr22_ctg3 Keio unk joingreen 4242 0 99.976  
AP000546.1 LA16c-18E3 Hschr22_ctg3 Keio unk joingreen 4738 1 99.641 simple sequence in gap
AP000547.1 KB-67B5 Hschr22_ctg3 Keio unk joingreen 33342 1 100  
AP000365.1 KB-7G2 Hschr22_ctg3 unk joingreen 5954 6 99.782 simple sequence in gap
AC005301.22 ? Hschr22_ctg3 UOKNOR fin joingreen 36275 0 100  
AC007064.27 ? Hschr22_ctg3 UOKNOR fin joingreen 62187 14 99.841 simple sequence in gap
AC006548.22 ? Hschr22_ctg3 UOKNOR fin joingreen 42583 0 100  
AC006946.20 ? Hschr22_ctg3 UOKNOR fin joinred 64788 2 99.997 >0 gap of 50bp or more, not simple sequence
AC005300.10 ? Hschr22_ctg3 UOKNOR fin joingreen 5686 1 99.930  
AC005399.21 ? Hschr22_ctg3 UOKNOR fin joingreen 22173 3 99.991 simple sequence in gap
AC004019.20 357F7 Hschr22_ctg3 UOKNOR fin joinred 104357 35 99.903 >0 gap of 500bp or more, not simple sequence
AC007666.12 ? Hschr22_ctg3 UOKNOR fin joingreen 15507 0 100  
AC006285.13 ? Hschr22_ctg3 UOKNOR fin joingreen 6785 9 99.882 simple sequence in gap
AC016026.15 ? Hschr22_ctg3 UOKNOR fin joingreen 3498 0 99.971  
AC016027.15 ? Hschr22_ctg3 UOKNOR fin joingreen 45512 1 99.978  
AC008079.24 ? Hschr22_ctg3 UOKNOR fin joinred 8208 1 99.878 half-dovetail of >50bp
AC008132.35 ? Hschr22_ctg3 UOKNOR fin joinyellow 9553 8 99.393 identity < 99.6%
AC008103.29 ? Hschr22_ctg3 UOKNOR fin joingreen 42364 1 99.986 simple sequence in gap
AC007326.28 ? Hschr22_ctg3 UOKNOR fin joingreen 3414 0 100  
AC000095.5 ? Hschr22_ctg3 UOKNOR fin joingreen 15684 0 100  
AC004461.3 119F4 Hschr22_ctg3 UOKNOR fin joingreen 6721 1 99.940  
AC004462.4 18C3 Hschr22_ctg3 UOKNOR fin joingreen 1008 1 100 simple sequence in gap
AC004471.2 111F11 Hschr22_ctg3 UOKNOR fin joingreen 3797 0 100  
AC004463.2 79H12 Hschr22_ctg3 UOKNOR fin joingreen 5798 5 100 simple sequence in gap
L77569.1 ? Hschr22_ctg3 unk joingreen 14447 4 99.951 simple sequence in gap
AC000081.2 59C10 Hschr22_ctg3 UOKNOR fin joingreen 4412 0 100  
AC000094.4 ? Hschr22_ctg3 UOKNOR fin joingreen 23481 4 99.936 simple sequence in gap
AC000085.5 72F8 Hschr22_ctg3 UOKNOR fin joingreen 33 0 100  
AC000092.1 98C4 Hschr22_ctg3 UOKNOR fin joingreen 1875 0 100  
AC000079.1 49C12 Hschr22_ctg3 UOKNOR fin joingreen 15191 0 100  
AC000068.2 102G9 Hschr22_ctg3 UOKNOR fin joingreen 6264 0 100  
AC000087.2 83C5 Hschr22_ctg3 UOKNOR fin joingreen 4242 0 100  
AC000088.2 83E8 Hschr22_ctg3 UOKNOR fin joingreen 17274 1 100  
AC000082.4 59F1 Hschr22_ctg3 UOKNOR fin joingreen 14394 0 100  
AC000070.2 105A Hschr22_ctg3 UOKNOR fin joingreen 2867 0 100  
AC000086.1 ? Hschr22_ctg3 UOKNOR fin joingreen 2055 0 100  
AC000077.2 ? Hschr22_ctg3 UOKNOR fin joingreen 100 0 100  
AC002475.2 ? Hschr22_ctg3 UOKNOR fin joingreen 120 0 100  
AC000067.2 100H Hschr22_ctg3 UOKNOR fin joingreen 1509 0 100  
AC000093.5 ? Hschr22_ctg3 UOKNOR fin joingreen 6643 0 100  
AC000091.1 ? Hschr22_ctg3 UOKNOR fin joingreen 846 0 100  
AC000089.1 ? Hschr22_ctg3 UOKNOR fin joingreen 9248 0 100  
AC000076.2 ? Hschr22_ctg3 UOKNOR fin joingreen 618 0 100  
AC000078.2 ? Hschr22_ctg3 UOKNOR fin joingreen 746 0 100  
AC000090.3 ? Hschr22_ctg3 UOKNOR fin joingreen 15216 0 100  
AC000080.2 ? Hschr22_ctg3 UOKNOR fin joinred 26107 12 99.835 >0 gap of 50bp or more, not simple sequence
AC005663.2 ? Hschr22_ctg3 UOKNOR fin joingreen 10334 0 99.990  
AC006547.9 ? Hschr22_ctg3 UOKNOR fin joingreen 64540 12 99.763 simple sequence in gap
AC007663.29 ? Hschr22_ctg3 UOKNOR fin joingreen 3369 0 99.852  
AC024070.2 ? Hschr22_ctg3 UOKNOR fin joinred 44 0 100 more than one overlap present
AC023490.5 ? Hschr22_ctg3 UOKNOR fin
GAP type-3    
? ABC14-1082022P5 Hschr22_ctg4  
AC011718.2 ? Hschr22_ctg4 UOKNOR fin joinyellow 5992 2 99.149 identity < 99.6%
AC007731.16 ? Hschr22_ctg4 UOKNOR fin joingreen 177532 23 99.966 simple sequence in gap
AC005500.2 ? Hschr22_ctg4 UOKNOR fin joinred 78505 11 99.978 >2 gap of 25bp or more, not simple sequence
AC004033.3 ? Hschr22_ctg4 UOKNOR fin joinred 56062 20 99.856 >0 gap of 500bp or more, not simple sequence
AC007050.25 ? Hschr22_ctg4 UOKNOR fin joingreen 22675 0 99.921  
AC007308.13 ? Hschr22_ctg4 UOKNOR fin joingreen 144499 79 99.842 simple sequence in gap
AC002470.17 ? Hschr22_ctg4 UOKNOR fin joingreen 43849 15 99.840 simple sequence in gap
AC002472.8 ? Hschr22_ctg4 UOKNOR fin joingreen 3965 1 99.950 simple sequence in gap
AP000550.1 KB-1592A4 Hschr22_ctg4 Keio unk joinyellow 1196 1 99.833 alignment length < 2000
AP000551.1 KB-876E2 Hschr22_ctg4 Keio unk joinyellow 355 0 99.437 half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000
AP000552.1 KB-1183D5 Hschr22_ctg4 Keio unk joingreen 67422 0 100  
AP000556.2 KB-1172D5 Hschr22_ctg4 Keio unk joingreen 69793 1 100 simple sequence in gap
AP000557.2 KB-1323B2 Hschr22_ctg4 Keio unk joingreen 21609 19 99.847 simple sequence in gap
AP000558.1 KB-1802C5 Hschr22_ctg4 Keio unk joingreen 11095 0 100  
AP000553.1 KB-1440D3 Hschr22_ctg4 Keio unk joinyellow 357 0 100 alignment length < 2000
AP000554.1 KB-666H9 Hschr22_ctg4 Keio unk joinyellow 586 0 100 alignment length < 2000
AP000555.1 KB-1027C11 Hschr22_ctg4 Keio unk joingreen 24888 3 100 simple sequence in gap
D86995.1 LL22NC03-109G12 Hschr22_ctg4 Keio unk joinyellow 1133 0 100 alignment length < 2000
D87019.1 LL22NC03-86G7 Hschr22_ctg4 Keio unk joinyellow 1070 0 100 alignment length < 2000
D87012.1 LL22NC03-61D6 Hschr22_ctg4 Keio unk joingreen 10457 0 100  
D88268.1 LL22NC03-47H9 Hschr22_ctg4 Keio unk joingreen 7159 1 100 simple sequence in gap
D86993.1 LL22NC03-23C6 Hschr22_ctg4 Keio unk joinyellow 802 0 100 alignment length < 2000
D87004.2 LL22NC03-4E7 Hschr22_ctg4 Keio unk joinyellow 988 0 100 alignment length < 2000
D87022.1 LL22NC03-88E1 Hschr22_ctg4 Keio unk joingreen 5689 0 100  
D88271.2 LL22NC03-114H4 Hschr22_ctg4 Keio unk joinyellow 1521 0 100 alignment length < 2000
D88269.2 LL22NC03-33B6 Hschr22_ctg4 Keio unk joingreen 6491 0 100  
D87000.2 LL22NC03-30E12 Hschr22_ctg4 Keio unk joinyellow 658 0 100 alignment length < 2000
D86996.1 LL22NC03-23F1 Hschr22_ctg4 Keio unk joinyellow 449 0 100 alignment length < 2000
D86989.2 LL22NC03-110H3 Hschr22_ctg4 Keio unk joinyellow 131 0 100 alignment length < 2000
D88270.2 LL22NC03-123E1 Hschr22_ctg4 Keio unk joingreen 4210 0 100  
D87003.1 LL22NC03-2H8 Hschr22_ctg4 Keio unk joinyellow 940 0 100 alignment length < 2000
D87018.1 LL22NC03-80A10 Hschr22_ctg4 Keio unk joingreen 12877 0 100  
D87016.2 LL22NC03-75A1 Hschr22_ctg4 Keio unk joingreen 6577 0 100  
D86999.1 LL22NC03-22A12 Hschr22_ctg4 Keio unk joinblack 43 0 N/A initial certificate; alignment length < 100
D87010.1 LL22NC03-35B9 Hschr22_ctg4 Keio unk joingreen 22596 5 99.920 simple sequence in gap
D87009.1 KB-288A10 Hschr22_ctg4 Keio unk joinyellow 16648 8 99.537 identity < 99.6%
D87011.2 LL22NC03-50D10 Hschr22_ctg4 Keio unk joinyellow 269 0 100 alignment length < 2000
D87013.1 LL22NC03-63E9 Hschr22_ctg4 Keio unk joingreen 3511 1 100 simple sequence in gap
D87014.1 LL22NC03-61E11 Hschr22_ctg4 Keio unk joinyellow 501 0 100 alignment length < 2000
D86991.1 LL22NC03-29D3 Hschr22_ctg4 Keio unk joinyellow 1717 1 100 alignment length < 2000
D87002.1 LL22NC03-31F3 Hschr22_ctg4 Keio unk joinyellow 1375 0 100 alignment length < 2000
D87006.1 LL22NC03-52F2 Hschr22_ctg4 Keio unk joinyellow 195 0 100 alignment length < 2000
D86994.1 LL22NC03-102D1 Hschr22_ctg4 Keio unk joinyellow 699 0 100 alignment length < 2000
D87007.1 LL22NC03-48A11 Hschr22_ctg4 Keio unk joingreen 6731 0 100  
D87015.2 LL22NC03-68D6 Hschr22_ctg4 Keio unk joingreen 4224 0 100  
D86998.1 LL22NC03-24A12 Hschr22_ctg4 Keio unk joingreen 2435 0 100  
D87021.1 LL22NC03-84E4 Hschr22_ctg4 Keio unk joingreen 3797 0 100  
D87024.1 LL22NC03-92H4 Hschr22_ctg4 Keio unk joinyellow 87 0 100 half-dovetail of >0bp and <=50bp; alignment length < 2000
D87020.1 LL22NC03-9G6 Hschr22_ctg4 Keio unk joinyellow 120 0 100 alignment length < 2000
D87023.1 LL22NC03-9C5 Hschr22_ctg4 Keio unk joingreen 11916 0 99.992  
D87017.2 LL22NC03-75C12 Hschr22_ctg4 Keio unk joingreen 8436 0 100  
AP000360.1 ? Hschr22_ctg4 unk joingreen 4063 0 100  
AP000361.1 ? Hschr22_ctg4 unk joingreen 6270 0 100  
AP000362.1 ? Hschr22_ctg4 unk joingreen 21419 0 99.995  
AC000029.17 865E9 Hschr22_ctg4 UOKNOR fin joingreen 473 0 100  
AC000102.1 60B5 Hschr22_ctg4 UOKNOR fin joinyellow 381 1 100 alignment length < 2000
U07000.1 ? Hschr22_ctg4 unk joingreen 75261 12 99.899 simple sequence in gap
AP000343.1 KB-282B12 Hschr22_ctg4 unk joingreen 30915 0 100  
AP000344.1 KB-1269D1 Hschr22_ctg4 unk joingreen 30011 23 99.757 simple sequence in gap
AP000345.1 KB-208E9 Hschr22_ctg4 unk joinred 73351 23 99.873 >0 gap of 500bp or more
AP000346.1 KB-1572G7 Hschr22_ctg4 unk joingreen 38568 2 99.990 simple sequence in gap
AP000347.1 KB-113H7 Hschr22_ctg4 unk joingreen 4973 0 99.940  
AP000348.1 ? Hschr22_ctg4 unk joingreen 8025 4 99.838 simple sequence in gap
AP000349.1 KB-1839H6 Hschr22_ctg4 unk joingreen 5794 0 100  
AP000350.1 KB-1125A3 Hschr22_ctg4 unk joingreen 19510 0 100  
AP000351.3 KB-226F1 Hschr22_ctg4 unk joinred 40418 30 99.812 >0 gap of 500bp or more
AP000352.2 KB-1561E1 Hschr22_ctg4 unk joingreen 24073 3 99.959 simple sequence in gap
AP000353.2 KB-318B8 Hschr22_ctg4 Keio unk joingreen 4065 0 100  
AP000354.1 KB-1674E1 Hschr22_ctg4 unk joingreen 23313 0 100  
AP000355.1 KB-1896H10 Hschr22_ctg4 unk joingreen 28995 13 99.924 simple sequence in gap
AP000356.1 KB-1995A5 Hschr22_ctg4 unk joingreen 9734 5 99.887 simple sequence in gap
AP000357.1 ? Hschr22_ctg4 unk joingreen 19044 0 100  
AP000358.1 ? Hschr22_ctg4 unk joingreen 15085 4 99.874 simple sequence in gap
AP000359.1 KB-63E7 Hschr22_ctg4 unk joingreen 19810 7 99.884 simple sequence in gap
AL049759.10 RP5-930L11 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL050312.8 RP11-9F11 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022323.7 CTA-243E7 Hschr22_ctg4 SC fin joingreen 97 0 100  
Z99916.1 CTA-221G9 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL022332.2 RP3-462D8 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL022324.1 CTA-246H3 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008721.1 CTA-390C10 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL022329.9 CTA-407F11 Hschr22_ctg4 SC fin joingreen 99 0 100  
AL080245.14 RP11-89B2 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z98949.1 CTA-125H2 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL079300.11 CTA-109D1 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL022337.19 CTA-796E4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL080273.10 RP11-259P1 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023513.1 RP1-268D13 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL078460.6 RP3-341O5 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035044.1 RP1-40G4 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z99714.2 CTB-48E9 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z95115.1 CTA-445C9 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z99774.1 CTA-373H7 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z95889.1 CTA-211A9 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z97353.3 RP1-90L6 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL008638.1 CTA-992D9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021153.1 CTA-503F6 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL034386.2 RP5-1172A22 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL020994.1 CTA-929C8 Hschr22_ctg4 SC fin joingreen 4192 2 99.857 simple sequence in gap
AL049536.5 RP1-205F14 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL050402.16 RP11-46E17 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL133456.1 RP1-231P7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL133397.1 RP1-213J1__A Hschr22_ctg4 SC fin joinyellow 100 0 100 half-dovetail of >0bp and <=50bp
AL390209.1 CTA-437G10__A Hschr22_ctg4 SC fin joingreen 100 0 100  
AL133398.2 RP1-213J1__B Hschr22_ctg4 SC fin joingreen 100 0 100  
AL121885.22 RP11-375H17 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL390210.1 CTA-437G10__B Hschr22_ctg4 SC fin joingreen 104 0 100  
AL031591.19 RP3-353E16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL033538.1 RP3-477H23 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035453.4 SC22CB-42E1 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL050313.6 CTA-754D9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035397.4 RP6-45P1 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL023281.1 CTA-544A11 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL008722.16 CTA-732E4 Hschr22_ctg4 SC fin joingreen 106 0 100  
AL080241.14 RP11-541J16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL118497.9 RP11-329J7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL121825.19 RP11-436C9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL117330.6 RP11-444G7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023494.12 RP3-366L4 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z93930.10 CTA-292E10 Hschr22_ctg4 SC fin joingreen 106 0 100  
AL031596.7 RP4-745C22 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z95113.2 CTA-175E3 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021393.1 CTA-747E2 Hschr22_ctg4 SC fin joinpurple 6 0 N/A approved certificate; no overlap present
Z95116.1 CTA-57G9 Hschr22_ctg4 SC fin joingreen 105 0 100  
AL031186.8 CTA-984G1 Hschr22_ctg4 SC fin joingreen 105 0 100  
AC000026.3 58B8 Hschr22_ctg4 UOKNOR fin joinred 118158 7 99.979 >0 gap of 50bp or more, not simple sequence
AC002059.3 ? Hschr22_ctg4 UOKNOR fin joingreen 36920 9 99.913 simple sequence in gap
AC000041.2 ? Hschr22_ctg4 UOKNOR fin joingreen 2328 0 100  
AC000035.2 ? Hschr22_ctg4 UOKNOR fin joingreen 27591 12 99.906 simple sequence in gap
AC005529.7 CTA-256D12 Hschr22_ctg4 UOKNOR fin joingreen 137154 20 99.927 simple sequence in gap
AC004882.3 RP1-76B20 Hschr22_ctg4 WUGSC fin joingreen 1453 0 100  
Z82171.2 SC22CB-11B7 Hschr22_ctg4 SC fin joingreen 200 0 100  
AC004819.2 RP1-15I23 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC003681.1 RP3-394A18 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC003071.1 CTA-85E5 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC002378.1 RP3-438O4 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC004264.1 RP1-102K2 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC004997.2 RP1-130H16 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC004832.3 RP4-539M6 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC005006.2 RP1-56J10 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC003072.1 CTA-963H5 Hschr22_ctg4 WUGSC fin joingreen 106 0 100  
AL079299.12 RP11-492A7 Hschr22_ctg4 SC fin joinyellow 104 0 99.038 identity < 99.6%
AL022336.1 RP1-78F24 Hschr22_ctg4 SC fin joingreen 7232 0 100  
AC004542.1 RP3-430N8 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC005233.2 RP5-1198O21 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC005005.1 RP3-412A9 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC002073.1 RP3-515N1 Hschr22_ctg4 WUGSC fin joingreen 200 0 100  
AC005003.2 RP3-400N23 Hschr22_ctg4 WUGSC fin joingreen 101 0 100  
AL096702.10 RP11-254F5 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL096701.14 RP11-247I13 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL109802.6 RP11-163M1 Hschr22_ctg4 SC fin joingreen 98 0 100  
AL096768.7 RP5-858B16 Hschr22_ctg4 SC fin joingreen 105 0 100  
AL031255.1 RP4-694E4 Hschr22_ctg4 SC fin joinyellow 2307 2 99.090 half-dovetail of >0bp and <=50bp; identity < 99.6%
AC005004.3 RP3-403E2 Hschr22_ctg4 WUGSC fin joingreen 100 0 100  
AL022331.1 CTA-440B3 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82190.1 RP1-180M12 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z83856.2 LL22NC03-113A11 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82248.1 LL22NC03-44A4 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL008719.1 CTA-342B11 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z74021.1 SC22CB-1E7 Hschr22_ctg4 SC fin joingreen 105 0 100  
Z80998.1 SC22CB-36G12 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z83849.1 CITF22-65B7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022321.1 RP1-20O8 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z83839.1 RP1-127L4 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL008723.8 RP1-90G24 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021937.1 RP1-149A16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035068.3 RP1-116G19 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z71183.2 LL22NC03-28H9 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z82181.2 LL22NC01-86D10 Hschr22_ctg4 SC fin joingreen 103 1 100 simple sequence in gap
Z80902.2 LL22NC03-80H12 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021452.20 CTA-285F3 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82246.2 LL22NC03-104C7 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z75744.2 LL22NC03-117B5 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z81309.1 LL22NC01-92H8 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z69714.1 LL22NC03-37F10 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z72521.1 LL22NC03-29F4 Hschr22_ctg4 SC fin joingreen 102 0 100  
Z72520.2 LL22NC03-19H5 Hschr22_ctg4 SC fin joingreen 106 0 100  
Z73495.1 LL22NC01-116C6 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023282.1 CTA-766E1 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z73979.1 SC22CB-10B1 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z98256.1 RP1-309I22 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL031592.1 CTA-366B10 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z83846.1 CTA-415G2 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82198.2 RP1-302D9 Hschr22_ctg4 SC fin joinyellow 101 0 99.010 identity < 99.6%
AL008630.1 CTA-282F2 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z82173.2 SC22CB-1D7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008715.1 CTC-216H12 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023577.1 CTA-566G5 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82179.3 LL22NC01-140F8 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z73421.1 LL22NC03-37D7 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL133451.1 LL22NC03-120B6 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z69943.3 LL22NC03-4F11 Hschr22_ctg4 SC fin joingreen 103 0 100  
AL008640.1 SC22CB-33D11 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z70288.1 LL22NC01-78G1 Hschr22_ctg4 SC fin joingreen 103 0 100  
Z97354.1 LL22NC03-117F11 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z69042.1 LL22NC01-95B1 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z68287.1 LL22NC03-38E12 Hschr22_ctg4 SC fin joingreen 103 0 100  
Z76736.1 RP1-75E8 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z69713.2 LL22NC03-20A6 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z68324.1 LL22NC03-7A10 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL096754.1 LL22NC03-2E9 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z49866.2 LL22NC03-73A10 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z54073.2 LL22NC03-13E1 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z77853.1 LL22NC03-53F3 Hschr22_ctg4 SC fin joingreen 103 0 100  
Z69715.2 LL22NC03-74G7 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z73429.1 LL22NC03-32F9 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z69925.2 LL22NC03-116A5 Hschr22_ctg4 SC fin joingreen 106 0 100  
Z68223.1 LL22NC01-110C7 Hschr22_ctg4 SC fin joingreen 102 0 100  
Z83852.1 SC22CB-49C12 Hschr22_ctg4 SC fin joingreen 105 0 100  
Z82182.2 LL22NC01-90C2 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z99704.1 LL22NC01-75B8 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z74581.1 LL22NC01-127C11 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL008641.1 LL22NC03-100B10 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z69707.1 LL22NC01-95B9 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z68285.2 LL22NC03-11D4 Hschr22_ctg4 SC fin joinyellow 100 1 99.000 identity < 99.6%; alignment length < 2000
AL022338.1 LL22NC01-82F7 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82250.1 LL22NC03-86D4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008717.1 CTA-221H1 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z68323.2 LL22NC03-13G6 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z68288.2 LL22NC03-5E4 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z68325.1 LL22NC03-98E6 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z69712.2 LL22NC03-12G10 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z68754.1 LL22NC01-78H10 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z68758.1 LL22NC03-85E10 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z50860.1 LL22NC03-76A1 Hschr22_ctg4 SC fin joinyellow 92 0 100 half-dovetail of >0bp and <=50bp
AL020992.1 CTA-363A12 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z68224.1 LL22NC01-129H9 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL049750.1 LL22NC01-141E2 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z69907.2 LL22NC03-22D1 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031001.1 RP1-281O16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021877.1 RP1-101G11 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82196.2 RP1-288L1 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL024495.1 RP3-404L14 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82194.1 RP1-272J12 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z83853.2 SC22CB-109E1 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL024494.1 RP1-215F16 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z99755.1 CTA-714B7 Hschr22_ctg4 SC fin joingreen 106 0 100  
AL031300.1 RP3-323A16 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL008635.1 RP3-510H16 Hschr22_ctg4 SC fin joingreen 113 0 100  
Z82244.1 CTA-286B10 Hschr22_ctg4 SC fin joingreen 100 0 100  
CR381707.2 ? Hschr22_ctg4 SC fin joinyellow 1000 0 100 half-dovetail of >0bp and <=50bp
BX936361.4 CITF22-91B8 Hschr22_ctg4 SC fin joinyellow 2000 0 100 half-dovetail of >0bp and <=50bp
BX927085.4 CITF22-37A6 Hschr22_ctg4 SC fin joinyellow 1946 2 99.897 half-dovetail of >0bp and <=50bp; alignment length < 2000
CR381709.1 ? Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022334.1 RP4-569D19 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL049747.1 CITF22-62D4 Hschr22_ctg4 SC fin joingreen 94 0 100  
Z79996.2 SC22CB-33F2 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL049748.2 RP1-41P2 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL079295.1 RP1-106I20 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82217.1 RP1-78B3 Hschr22_ctg4 SC fin joinyellow 104 0 99.038 identity < 99.6%
Z95114.19 CTA-212A2 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031426.1 CTA-191D12 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z82215.1 RP1-68O2 Hschr22_ctg4 SC fin joingreen 100 0 100  
CR383703.1 RP4-633O19__A Hschr22_ctg4 SC fin joingreen 1994 2 99.749 simple sequence in gap
BX470187.9 WI2-80423F1 Hschr22_ctg4 SC fin joingreen 1995 1 99.749 simple sequence in gap
CR383704.1 RP4-633O19__B Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022313.1 RP5-1119A7 Hschr22_ctg4 SC fin joingreen 2000 1 100 simple sequence in gap
AL031845.7 CTA-566H6 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z70289.1 CITF22-4G12 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL049749.2 RP1-293L6 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z80897.2 LL22NC01-132D12 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82184.1 CITF22-126G10 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82185.1 CITF22-24E5 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008637.1 CTA-833B7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL133392.1 CITF22-45C1 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82180.19 LL22NC01-81G9 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z73420.1 LL22NC01-146D10 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL022314.1 RP5-1170K4 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82188.2 RP1-151B14 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z94160.1 RP1-63G5 Hschr22_ctg4 SC fin joinyellow 104 0 100 alignment length < 2000
FP325335.1 RP5-889J22 Hschr22_ctg4 SC fin joinyellow 104 0 100 alignment length < 2000
AL022315.1 RP5-1177I5 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL109980.1 RP4-697G8 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL035496.6 RP3-437O22 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z83844.5 RP1-37E16 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z97630.11 RP3-466N1 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL022311.5 RP5-1014D13 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031587.3 RP5-1039K5 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL022322.1 CTA-228A9 Hschr22_ctg4 SC fin joingreen 94 0 100  
AL021977.10 CTA-447C4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL020993.1 RP1-5O6 Hschr22_ctg4 SC fin joingreen 100 1 100 simple sequence in gap
Z98749.11 RP3-449O17 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z97056.1 RP3-434P1 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL022320.23 RP1-199H16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035495.13 RP1-319F24 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021707.2 RP3-508I15 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021806.1 RP4-779B17 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008583.1 RP3-327J16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022318.2 CTA-150C2 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL078641.2 RP3-494G10 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031846.2 RP4-742C19 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z81010.2 LL22NC03-10C3 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031590.2 CTA-232D4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022326.1 RP3-333H23 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z83845.14 RP3-407F17 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022312.7 RP5-1104E15 Hschr22_ctg4 SC fin joingreen 105 0 100  
AL008716.1 CTA-206C7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022319.2 RP1-172B20 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022353.1 CTA-352E11 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82206.1 RP3-370M22 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z83847.1 RP3-496C20 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL033547.8 RP3-340K22 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL031589.10 RP6-11O7 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z93783.6 RP3-377F16 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022238.1 RP5-1042K10 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031594.9 RP4-591N18 Hschr22_ctg4 SC fin joingreen 106 0 100  
Z86090.10 CTA-229A8 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL096703.14 RP4-735G18 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL049764.4 RP3-362J20 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z98048.1 RP3-408N23 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL035450.1 RP5-1057D18 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL080242.11 RP11-554C12 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL080243.21 RP11-12M9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL096765.12 RP11-422A16 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL035658.7 RP1-85F18 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035681.13 RP4-756G23 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035659.22 RP5-979N1 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008582.11 CTA-223H9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023553.5 RP3-347H13 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z83840.7 CTA-216E10 Hschr22_ctg4 SC fin joingreen 99 0 100  
AL023879.1 CTA-109G6 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021453.1 RP5-821D11 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z99716.4 CTA-250D10 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
Z82192.1 RP1-186O1 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
AL021878.4 RP1-257I20 Hschr22_ctg4 SC fin joinred 76241 24 99.904 >0 gap of 500bp or more, not simple sequence
BX247885.11 RP4-669P10 Hschr22_ctg4 SC fin joingreen 1295 0 100  
Z83851.17 CTA-989H11 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022316.2 CTA-126B4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035418.6 RP1-141I3 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
Z93241.11 RP1-222E13 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82176.1 SC22CB-33B7 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL049757.14 RP1-47A17 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL049758.11 RP3-437M21 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022476.2 RP3-323M22 Hschr22_ctg4 SC fin joinyellow 102 0 99.020 identity < 99.6%; alignment length < 2000
AL022237.1 CTB-191B2 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82214.23 RP3-526I14 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
Z99756.7 RP1-100N22 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%; alignment length < 2000
FP325334.1 RP4-754E20 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
AL049708.9 PRYM736A3A Hschr22_ctg4 SC fin joingreen 2399 0 99.917  
BX890592.4 C005500511 Hschr22_ctg4 SC fin joinyellow 1325 0 99.774 alignment length < 2000
CU137653.1 C0511C0695L Hschr22_ctg4 SC fin joinyellow 1263 0 99.842 alignment length < 2000
CR377231.3 C008600695RC Hschr22_ctg4 SC fin joingreen 732 0 100  
BX546033.2 FW80414D10L Hschr22_ctg4 SC fin joingreen 3213 1 99.938 simple sequence in gap
AL929420.9 CITF22-123F2 Hschr22_ctg4 SC fin joingreen 2000 3 99.900 simple sequence in gap
AL118498.9 RP1-185D5 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031843.2 RP1-246D7 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82201.1 RP3-345P10 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023801.1 RP4-786D3 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z97055.1 RP3-388M5 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023654.2 RP4-549K18 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL035398.19 RP4-796I17 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82178.2 SC22CB-79B4 Hschr22_ctg4 SC fin joingreen 105 0 100  
Z82174.2 SC22CB-20F6 Hschr22_ctg4 SC fin joingreen 103 0 100  
AL033543.6 CTA-414D7 Hschr22_ctg4 SC fin joingreen 107 0 100  
AL031595.4 RP4-671O14 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL022339.1 LL22NC03-75B3 Hschr22_ctg4 SC fin joingreen 2000 0 100  
AL591914.3 CITF22-4H11 Hschr22_ctg4 SC fin joingreen 2000 0 100  
AL671760.9 CITF22-11D1 Hschr22_ctg4 SC fin joingreen 2245 0 99.822  
CR933566.2 C017600455L Hschr22_ctg4 SC fin joingreen 793 0 99.874  
CR936470.4 C455C658L Hschr22_ctg4 SC fin joingreen 345 0 100  
CR936488.2 C009500658L Hschr22_ctg4 SC fin joinyellow 744 0 100 alignment length < 2000
CU210860.2 AA-58C926RCL Hschr22_ctg4 SC fin joinyellow 220 0 100 alignment length < 2000
CT009695.1 AA-26RCL Hschr22_ctg4 SC fin joinyellow 113 0 100 alignment length < 2000
CR954960.1 CHIMPC702L Hschr22_ctg4 SC fin joingreen 307 0 100  
BX890582.2 C024501702 Hschr22_ctg4 SC fin joingreen 901 0 99.889  
AL929500.4 CITF22-57B10 Hschr22_ctg4 SC fin joingreen 2000 0 99.800  
Z85994.1 RP1-32I10 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z81308.2 CTA-397C4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023973.1 RP5-1033E15 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z75407.2 LL22NC03-128A12 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022317.1 RP1-140L1 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL022333.1 RP3-474I12 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z98743.1 RP1-181C9 Hschr22_ctg4 SC fin joingreen 111 0 100  
Z93244.1 CTA-116F5 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z83838.2 RP1-127B20 Hschr22_ctg4 SC fin joinyellow 100 0 98.000 identity < 99.6%; alignment length < 2000
AL079301.14 RP4-753M9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL049760.26 PRYR7CC1 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
Z82243.1 CTA-217C2 Hschr22_ctg4 SC fin joingreen 101 0 100  
AL008718.23 CTA-268H5 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021391.2 RP1-102D24 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z98047.1 RP1-162H14 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z95331.2 CTA-941F9 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z93784.1 RP3-398C22 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z84478.1 RP1-37M3 Hschr22_ctg4 SC fin joingreen 1998 1 99.700 simple sequence in gap
BX324167.9 WI2--85898F10 Hschr22_ctg4 SC fin joingreen 1999 0 99.900  
BX511035.7 RP11-435J19 Hschr22_ctg4 SC fin joingreen 2000 0 100  
CR536603.4 WI2-2439F13 Hschr22_ctg4 SC fin joingreen 683 0 99.707  
CR956437.2 FW2439FW1777L Hschr22_ctg4 SC fin joinblack 18 0 N/A initial certificate; half-dovetail of >50bp; alignment length < 100
CR933557.2 FW1777B19L Hschr22_ctg4 SC fin joingreen 783 0 100  
BX537318.11 CITF22-92A6 Hschr22_ctg4 SC fin joingreen 2000 0 100  
AL929387.7 RP11-398F12 Hschr22_ctg4 SC fin joingreen 2000 0 100  
AL121672.30 RP6-109B7 Hschr22_ctg4 SC fin joingreen 2000 0 100  
FP325332.1 RP4-695O20 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
AL078611.1 5E3 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031034.1 LL22NC03-98G1 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z93024.1 LL22NC03-5H6 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031844.1 RP3-361H15 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031588.1 RP5-1163J1 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL031597.7 RP5-996D20 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL021392.5 RP3-439F8 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL096766.12 RP6-59H18 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL118516.10 CTA-29F11 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL078642.12 RP5-917C11 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z97351.1 RP1-116M15 Hschr22_ctg4 SC fin joingreen 105 0 100  
Z82187.1 CITF22-64F4 Hschr22_ctg4 SC fin joingreen 104 0 100  
U51561.1 79E2 Hschr22_ctg4 fin joingreen 100 0 100  
AL023576.1 CTA-358H9 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z80896.2 RP1-67C13 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z79999.2 CITF22-111A3 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023733.1 58F5 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%
Z81000.2 CITF22-67D6 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
FP325331.1 RP3-477J10 Hschr22_ctg4 SC fin joinyellow 100 0 99.000 identity < 99.6%; alignment length < 2000
Z82183.1 LL22NC01-98F6 Hschr22_ctg4 SC fin joingreen 102 0 100  
Z83836.2 RP1-111J24 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82186.1 CITF22-49D8 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL035069.5 RP3-404P13 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z84496.1 LL22NC03-75H12 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL021306.1 CTB-109B5 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z80999.1 LL22NC01-140G5 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z73416.2 LL22NC03-114B2 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL033544.15 LL22NC01-107C5 Hschr22_ctg4 SC fin joinyellow 1994 2 99.549 identity < 99.6%; alignment length < 2000
AL049568.8 SC22CB-23F1 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
Z80901.1 LL22NC03-119A7 Hschr22_ctg4 SC fin joingreen 39520 15 99.884 simple sequence in gap
AC000034.3 ? Hschr22_ctg4 UOKNOR fin joinyellow 141 0 99.291 identity < 99.6%
Z83854.2 SC22CB-44H3 Hschr22_ctg4 SC fin joinyellow 104 0 99.038 identity < 99.6%
AL117329.8 RP11-191L9 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
AL121580.9 RP13-455A7 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
FP325330.1 CTA-280A3 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
Z70688.1 LL22NC03-27C5 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z81002.2 LL22NC03-53A9 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z80772.1 CITF22-37F6 Hschr22_ctg4 SC fin joinyellow 101 0 100 alignment length < 2000
BX284656.2 CITF22-91B7 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
AL050314.3 RP1-100G10 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL008720.1 CTA-343C1 Hschr22_ctg4 SC fin joinyellow 104 0 99.038 identity < 99.6%
Z72006.1 LL22NC03-69F4 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z82249.1 LL22NC03-4D6 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL078640.7 RP11-536P6 Hschr22_ctg4 SC fin joingreen 101 0 100  
Z84468.1 CTA-299D3 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL096853.13 CITF22-96H12 Hschr22_ctg4 SC fin joingreen 1020 0 99.902  
CR391954.2 C010900614RC Hschr22_ctg4 SC fin joinyellow 518 0 100 alignment length < 2000
CR450365.4 F96S22 Hschr22_ctg4 SC fin joingreen 1979 0 99.950  
CR456636.2 F96F65 Hschr22_ctg4 SC fin joinyellow 689 0 100 alignment length < 2000
AL954745.16 CITF22-65C6 Hschr22_ctg4 SC fin joinyellow 1996 1 100 alignment length < 2000
AL096843.12 RP11-262A13 Hschr22_ctg4 SC fin joinyellow 104 0 99.038 identity < 99.6%; alignment length < 2000
Z83837.1 CITF22-113D11 Hschr22_ctg4 SC fin joingreen 104 0 100  
Z83855.2 LL22NC03-104C4 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL078607.5 RP4-619N21 Hschr22_ctg4 SC fin joingreen 1999 1 99.850 simple sequence in gap
AL954742.7 CITF22-114E11 Hschr22_ctg4 SC fin joingreen 2000 0 99.850  
BX324183.9 83857E1 Hschr22_ctg4 SC fin joingreen 2000 1 99.700  
BX927063.6 CITF22-118E8 Hschr22_ctg4 SC fin joingreen 2000 1 99.800  
BX324178.9 81516E3 Hschr22_ctg4 SC fin joingreen 2000 0 99.950  
AL078613.11 RP11-354I12 Hschr22_ctg4 SC fin joinyellow 100 0 100 alignment length < 2000
AL078622.7 RP5-925J7 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL078632.6 RP11-255N20 Hschr22_ctg4 SC fin joinyellow 104 0 100 alignment length < 2000
FP340309.1 RP5-1061O18 Hschr22_ctg4 SC fin joinyellow 104 0 100 alignment length < 2000
Z94162.1 LL22NC03-21F1 Hschr22_ctg4 SC fin
GAP type-2    
Z82202.1 RP1-34P24 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z82189.1 RP1-170A21 Hschr22_ctg4 SC fin joingreen 104 0 100  
AL008636.1 CTA-722E9 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL031593.1 RP4-566L20 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z97192.2 RP1-29C18 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL023802.1 RP5-983L19 Hschr22_ctg4 SC fin joingreen 100 0 100  
Z98885.1 RP3-522J7 Hschr22_ctg4 SC fin joingreen 100 0 100  
AL117328.5 RP11-494O16 Hschr22_ctg4 SC fin joingreen 2976 2 99.731 simple sequence in gap
AL671710.13 CITF22-1A6 Hschr22_ctg4 SC fin joingreen 2000 0 100  
BX539320.10 CITF22-49E9 Hschr22_ctg4 SC fin joingreen 2000 0 100  
CR536608.3 CITF22-5B3 Hschr22_ctg4 SC fin joinyellow 935 0 99.893 alignment length < 2000
CT009694.2 AA-70L Hschr22_ctg4 SC fin
GAP type-3    
CT025869.2 AADA652C669L Hschr22_ctg8 SC fin joinyellow 164 0 100 alignment length < 2000
CT025559.1 AADA731B232L Hschr22_ctg8 SC fin joinyellow 310 0 99.677 alignment length < 2000
AL022327.17 RP3-355C18 Hschr22_ctg8 SC fin joingreen 100 0 100  
AL034546.5 RP5-898I4 Hschr22_ctg8 SC fin joingreen 100 0 100  
AL022328.21 RP3-402G11 Hschr22_ctg8 SC fin joinyellow 841 0 98.692 identity < 99.6%
BX649592.2 80131G2 Hschr22_ctg8 SC fin joingreen 296 0 100  
CR790389.2 C004201334L Hschr22_ctg8 SC fin joinyellow 248 0 100 alignment length < 2000
CT010163.2 36887L Hschr22_ctg8 SC fin joinyellow 163 0 100 alignment length < 2000
CR932344.3 C024601283L Hschr22_ctg8 SC fin joinyellow 826 0 100 alignment length < 2000
CR559946.2 C283C717 Hschr22_ctg8 SC fin joinyellow 597 0 99.832 alignment length < 2000
CR932343.3 C00717C00720L Hschr22_ctg8 SC fin joingreen 1296 0 99.846  
CR759740.2 C018300720L Hschr22_ctg8 SC fin joinyellow 1047 0 100 alignment length < 2000
CT009622.1 AA-20C749L Hschr22_ctg8 SC fin joinyellow 103 0 100 alignment length < 2000
CU041238.2 AA-49AADD513L Hschr22_ctg8 SC fin joinyellow 641 0 100 alignment length < 2000
CU074331.2 AA-DD513F116L Hschr22_ctg8 SC fin joinyellow 1147 0 100 alignment length < 2000
BX545851.6 CITF22-116F7 Hschr22_ctg8 SC fin joingreen 2000 0 100  
AL954743.9 CITF22-49G11 Hschr22_ctg8 SC fin joingreen 2000 0 100  
AL671545.13 CITF22-53E7 Hschr22_ctg8 SC fin joingreen 1999 1 99.950 simple sequence in gap
AL096767.14 RP4-579N16 Hschr22_ctg8 SC fin joinyellow 100 0 99.000 identity < 99.6%
Z94802.1 CTA-999D10 Hschr22_ctg8 SC fin joinyellow 102 0 99.020 identity < 99.6%; alignment length < 2000
U62317.2 CTA-384D8 Hschr22_ctg8 TIGR unk joinyellow 100 0 100 alignment length < 2000
Z82168.2 RP1-104C13 Hschr22_ctg8 SC fin joinyellow 100 0 100 alignment length < 2000
Z82245.1 CTA-799F10 Hschr22_ctg8 SC fin joingreen 97 0 100  
AC000050.22 ? Hschr22_ctg8 fin joingreen 8225 2 99.976  
AC000036.5 ? Hschr22_ctg8 UOKNOR fin joingreen 18417 0 100  
AC002056.1 ? Hschr22_ctg8 UOKNOR fin joingreen 1709 1 100  
AC002055.2 ? Hschr22_ctg8 UOKNOR fin
GAP type-3    
GAP TELOMERE 10000