Human TPF View for chromsome 20

Find a TPF

Join Legend: Click on the colored ball in the 'join' column to see alignment details.

Serious alignment problem, requires review
Minor alignment problem
Excellent alignment

Certificate submitted, not yet approved
Certificate submitted and approved
Join not evaluated
Valid, contained clone

tpf view for chr 20 (reference)
acc	name	ctg	center	status	align length	gaps	% id	comments
GAP	TELOMERE	10000
GAP	type-3
AL645732.1	LA20-C25	Hschr20_ctg1	SC	fin	2000	0	99.900
AL360078.16	RP11-530N10	Hschr20_ctg1	SC	fin	100	0	100
AL034548.25	RP5-1103G7	Hschr20_ctg1	SC	fin	100	0	100
AL121747.41	RP5-852M4	Hschr20_ctg1	SC	fin	100	1	100	simple sequence in gap
AL049761.11	RP5-863C7	Hschr20_ctg1	SC	fin	90	0	98.889	identity < 99.6%
AL133231.15	RP5-867F11	Hschr20_ctg1	SC	fin	100	0	100
AL121758.24	RP5-850E9	Hschr20_ctg1	SC	fin	101	0	100
AL118502.38	RP11-371L19	Hschr20_ctg1	SC	fin	100	0	100
AL161939.10	RP11-276A18	Hschr20_ctg1	SC	fin	100	0	100
AL050325.20	RP5-824F16	Hschr20_ctg1	SC	fin	104	0	100
AL110114.1	RP5-868P24	Hschr20_ctg1	SC	fin	103	0	100
AL031665.19	RP4-545L17	Hschr20_ctg1	SC	fin	100	0	100
AL136531.16	RP11-314N13	Hschr20_ctg1	SC	fin	100	0	100
AL109658.5	RP4-776F14	Hschr20_ctg1	SC	fin	104	0	100
AL049634.8	RP4-576H24	Hschr20_ctg1	SC	fin	8266	1	100
AL592544.2	RP4-531N19	Hschr20_ctg1	SC	fin	2000	0	100
AL138804.17	RP11-77C3	Hschr20_ctg1	SC	fin	100	0	100	alignment length < 2000
AL109809.18	RP4-673D20	Hschr20_ctg1	SC	fin	100	0	100
AL121760.11	RP5-968J1	Hschr20_ctg1	SC	fin	97	0	100
AL117335.26	RP5-858L17	Hschr20_ctg1	SC	fin	96	0	100
AL034562.3	RP4-684O24	Hschr20_ctg1	SC	fin	100	0	100
AL359916.8	RP11-550O8	Hschr20_ctg1	SC	fin	100	0	100
AL121899.37	RP11-128M1	Hschr20_ctg1	SC	fin	100	0	100
AL031678.2	RP4-816K17	Hschr20_ctg1	SC	fin	104	0	100
AL049650.8	RP4-734P14	Hschr20_ctg1	SC	fin	104	0	100
AL133339.13	RP4-807J1	Hschr20_ctg1	SC	fin	101	0	100
AL049712.12	RP4-686C3	Hschr20_ctg1	SC	fin	104	0	100
AL133345.11	RP5-1056J6	Hschr20_ctg1	SC	fin	101	0	100
AL035460.15	RP5-860F19	Hschr20_ctg1	SC	fin	100	0	100
AL161656.20	RP11-12M19	Hschr20_ctg1	SC	fin	100	0	100
AL121905.23	RP4-534B8	Hschr20_ctg1	SC	fin	100	0	100
AL160414.18	RP5-931H19	Hschr20_ctg1	SC	fin	100	0	100
AL121891.22	RP5-1187M17	Hschr20_ctg1	SC	fin	100	0	100
AL109976.23	RP4-794I6	Hschr20_ctg1	SC	fin	98	0	100
AL117334.29	RP4-687F11	Hschr20_ctg1	SC	fin	100	0	100
AL353193.7	RP11-137F15	Hschr20_ctg1	SC	fin	100	0	100
AL109805.14	RP4-581P3	Hschr20_ctg1	SC	fin	100	0	100
AL132773.14	RP4-741H3	Hschr20_ctg1	SC	fin	100	0	100
AL356755.12	RP5-964F7	Hschr20_ctg1	SC	fin	100	0	100
AL109804.41	RP5-1009E24	Hschr20_ctg1	SC	fin	100	0	100
AL353194.13	RP11-119B16	Hschr20_ctg1	SC	fin	100	0	100
AL031670.6	RP4-681N20	Hschr20_ctg1	SC	fin	100	0	100
AL356414.11	RP11-352D3	Hschr20_ctg1	SC	fin	100	0	100
AL121675.36	RP4-779E11	Hschr20_ctg1	SC	fin	100	0	100
AL357040.14	RP11-137P16	Hschr20_ctg1	SC	fin	100	0	100
AL139350.17	RP11-307O10	Hschr20_ctg1	SC	fin	86494	15	99.917	simple sequence in gap
AL121781.38	RP5-1164C1	Hschr20_ctg1	SC	fin	101	0	100
AL121916.14	RP1-189G13	Hschr20_ctg1	SC	fin	100	0	100
AL133396.2	RP5-1068H6	Hschr20_ctg1	SC	fin	104	0	100
AL133354.14	RP4-599I11	Hschr20_ctg1	SC	fin	100	0	100
AL445075.1	RP4-571I10	Hschr20_ctg1	SC	fin	100	0	100
AL389886.10	RP1-237C24	Hschr20_ctg1	SC	fin	100	0	100
AL109841.16	RP5-826I18	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL121890.34	RP5-1116H23	Hschr20_ctg1	SC	fin	100	0	100
AL121924.13	RP4-746J20	Hschr20_ctg1	SC	fin	100	0	100
AL121755.23	RP4-680N4	Hschr20_ctg1	SC	fin	96	0	100
AL121757.7	RP5-828H9	Hschr20_ctg1	SC	fin	99	0	100
AL109935.39	RP5-1022P6	Hschr20_ctg1	SC	fin	100	0	100
AL117377.18	RP5-1037B9	Hschr20_ctg1	SC	fin	100	0	100
AL035249.6	RP5-1054C24	Hschr20_ctg1	SC	fin	100	0	100
AL390028.11	RP4-784N16	Hschr20_ctg1	SC	fin	100	0	100
AL035461.11	RP5-967N21	Hschr20_ctg1	SC	fin	100	0	100
AL118505.17	RP5-1056H1	Hschr20_ctg1	SC	fin	100	0	100
AL359954.6	RP11-318P23	Hschr20_ctg1	SC	fin	99	0	100	half-dovetail of >0bp and <=50bp
AL109618.1	RP4-775C13	Hschr20_ctg1	SC	fin	100	0	100
AL158093.8	RP5-959I16	Hschr20_ctg1	SC	fin	100	0	100
AL162504.12	RP11-199O14	Hschr20_ctg1	SC	fin	100	0	100
AL121911.15	RP5-989D7	Hschr20_ctg1	SC	fin	100	0	100
AL035668.15	RP5-859D4	Hschr20_ctg1	SC	fin	107	0	100
AL109856.3	RP3-485E14	Hschr20_ctg1	SC	fin	105	0	100
AL034554.8	RP5-994L9	Hschr20_ctg1	SC	fin	100	0	100
AL161655.8	RP11-116E13	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL096799.6	RP4-764O22	Hschr20_ctg1	SC	fin	100	0	100
AL080248.7	RP11-19D2	Hschr20_ctg1	SC	fin	104	0	100
AL078643.5	RP5-988G17	Hschr20_ctg1	SC	fin	104	0	100
AL096792.5	RP5-1067P23	Hschr20_ctg1	SC	fin	104	0	100
AL096769.7	RP5-1080B10	Hschr20_ctg1	SC	fin	104	0	100
AL031653.5	RP5-1121J18	Hschr20_ctg1	SC	fin	104	0	100
AL031679.1	RP5-836E8	Hschr20_ctg1	SC	fin	100	0	100
AL021879.3	RP1-209B9	Hschr20_ctg1	SC	fin	96	0	100	half-dovetail of >0bp and <=50bp
AL035664.18	RP4-611O11	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL021396.8	RP5-971N18	Hschr20_ctg1	SC	fin	104	0	100
AL050323.6	RP4-793N16	Hschr20_ctg1	SC	fin	104	0	100
AL021406.1	RP5-997K18	Hschr20_ctg1	SC	fin	100	0	100
AL121589.17	RP5-1140M3	Hschr20_ctg1	SC	fin	100	0	100
AL034551.17	RP4-606P22	Hschr20_ctg1	SC	fin	100	0	100
AL365212.15	RP4-581M22	Hschr20_ctg1	SC	fin	100	0	100
AL050319.9	RP5-1007P8	Hschr20_ctg1	SC	fin	104	0	100
AL031655.8	RP1-134N8	Hschr20_ctg1	SC	fin	100	0	100
AL049632.10	RP5-913G4	Hschr20_ctg1	SC	fin	100	0	100
AL050315.11	RP5-1173K17	Hschr20_ctg1	SC	fin	100	0	100
AL031683.2	RP5-881E24	Hschr20_ctg1	SC	fin	100	0	100
AL049593.10	RP4-654A7	Hschr20_ctg1	SC	fin	100	0	100
AL445567.1	RP5-859I17	Hschr20_ctg1	SC	fin	100	0	100
AL121898.23	RP11-430K20	Hschr20_ctg1	SC	fin	100	0	100
AL121909.10	RP4-812P3	Hschr20_ctg1	SC	fin	100	0	100
AL023805.2	RP4-811H13	Hschr20_ctg1	SC	fin	100	0	100
AL031652.4	RP5-1119D9	Hschr20_ctg1	SC	fin	100	0	100
AL353612.9	RP5-986I17	Hschr20_ctg1	SC	fin	100	0	100
AL135935.17	RP11-193E12	Hschr20_ctg1	SC	fin	103	0	100
AL031682.4	RP5-873P14	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL034427.4	RP4-702M17	Hschr20_ctg1	SC	fin	100	0	100
AL353739.4	RP11-19D15	Hschr20_ctg1	SC	fin	100	0	100
AL109754.13	RP5-839B4	Hschr20_ctg1	SC	fin	100	0	100
AL354824.8	RP11-416N4	Hschr20_ctg1	SC	fin	100	0	100
AL023913.6	RP5-1068F16	Hschr20_ctg1	SC	fin	96	0	100
AL034430.4	RP5-931K24	Hschr20_ctg1	SC	fin	100	0	100
AL353599.7	RP11-254M13	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL133340.27	RP11-204H22	Hschr20_ctg1	SC	fin	92	0	100
AL035456.26	RP5-1099D15	Hschr20_ctg1	SC	fin	100	0	100
AL135937.22	RP1-278O22	Hschr20_ctg1	SC	fin	100	0	100
AL050403.16	RP4-697P8	Hschr20_ctg1	SC	fin	100	0	100
AL158042.9	RP11-103J8	Hschr20_ctg1	SC	fin	100	0	100
AL050322.13	RP4-727I10	Hschr20_ctg1	SC	fin	100	0	100
AL078588.9	RP4-784K2	Hschr20_ctg1	SC	fin	100	0	100
AL049649.7	RP4-734C18	Hschr20_ctg1	SC	fin	100	0	100
AL049690.20	RP5-1060K6	Hschr20_ctg1	SC	fin	100	0	100
AL079337.13	RP4-813H11	Hschr20_ctg1	SC	fin	101	0	100
AL109837.22	RP5-1128N12	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL161938.6	RP11-268G13	Hschr20_ctg1	SC	fin	100	0	100
AL445667.4	RP11-489A10	Hschr20_ctg1	SC	fin	93	0	100	half-dovetail of >0bp and <=50bp
AL080274.21	RP5-1012F16	Hschr20_ctg1	SC	fin	101	0	100
AL035448.29	RP4-742J24	Hschr20_ctg1	SC	fin	100	0	100
AL034547.14	RP5-1098F8	Hschr20_ctg1	SC	fin	104	0	100
AL109838.11	RP4-796I8	Hschr20_ctg1	SC	fin	100	0	100
AL136460.28	RP11-102J14	Hschr20_ctg1	SC	fin	100	0	100
AL096862.18	RP4-744A17	Hschr20_ctg1	SC	fin	98	0	100
AL034561.5	RP4-692C8	Hschr20_ctg1	SC	fin	86	0	100
AL138850.12	RP11-104O6	Hschr20_ctg1	SC	fin	100	0	100
AL354804.15	RP4-708H13	Hschr20_ctg1	SC	fin	100	0	100
AL078623.28	RP5-1069C8	Hschr20_ctg1	SC	fin	100	0	100
AL133331.27	RP11-157E14	Hschr20_ctg1	SC	fin	100	0	100
AL445589.6	RP11-303K20	Hschr20_ctg1	SC	fin	100	0	100
AL109983.2	RP4-718P11	Hschr20_ctg1	SC	fin	100	0	100
AL050320.19	RP5-1077I2	Hschr20_ctg1	SC	fin	100	0	100
AL133463.16	RP11-149I18	Hschr20_ctg1	SC	fin	100	0	100
AL121782.9	RP4-585I14	Hschr20_ctg1	SC	fin	104	0	100
AL158089.8	RP3-487D22	Hschr20_ctg1	SC	fin	107	0	100
AL121754.18	RP4-629F1	Hschr20_ctg1	SC	fin	100	0	100
AL161659.17	RP11-526K24	Hschr20_ctg1	SC	fin	100	0	100
AL109657.8	RP5-842G6	Hschr20_ctg1	SC	fin	100	0	100
AL354683.12	RP11-259K11	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL117333.26	RP4-631M13	Hschr20_ctg1	SC	fin	100	0	100
AL353798.9	RP11-67K15	Hschr20_ctg1	SC	fin	92	0	100
AL136992.22	RP11-400P21	Hschr20_ctg1	SC	fin	100	0	100
AL132826.18	RP4-581I13	Hschr20_ctg1	SC	fin	100	0	100
AL355133.8	RP11-54N6	Hschr20_ctg1	SC	fin	100	0	100
AL121582.19	RP11-280O9	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL139825.14	RP11-467D7	Hschr20_ctg1	SC	fin	100	0	100
AL354773.8	RP5-855L24	Hschr20_ctg1	SC	fin	99	1	100
AL118510.6	RP5-858M22	Hschr20_ctg1	SC	fin	100	0	100
AL161800.10	RP11-318C17	Hschr20_ctg1	SC	fin	100	0	100
AL138808.17	RP5-974N19	Hschr20_ctg1	SC	fin	100	0	100
AL031677.5	RP4-790B6	Hschr20_ctg1	SC	fin	100	0	100
AL133462.23	RP11-108A16	Hschr20_ctg1	SC	fin	100	0	100
AL049633.3	RP5-1069O1	Hschr20_ctg1	SC	fin	101	0	100
AL049867.2	RP4-738I16	Hschr20_ctg1	SC	fin	95	0	100
AL158088.6	RP5-1003H17	Hschr20_ctg1	SC	fin	106	0	100
AL121584.24	RP11-388K2	Hschr20_ctg1	SC	fin	100	0	100
AL050324.5	RP5-822J19	Hschr20_ctg1	SC	fin	101	0	100
AL118503.15	RP4-689C5	Hschr20_ctg1	SC	fin	101	0	100
AL035073.7	RP5-997O15	Hschr20_ctg1	SC	fin	2588	0	100
AC006198.1	RP11-3A1	Hschr20_ctg1	WIBR	fin	120599	14	99.966	simple sequence in gap
AL079338.16	RP5-841K13	Hschr20_ctg1	SC	fin	100	0	100
AL357654.9	RP5-1025P18	Hschr20_ctg1	SC	fin	100	0	100
AL136991.26	RP11-189J1	Hschr20_ctg1	SC	fin	100	0	100
AL357504.6	RP11-568B1	Hschr20_ctg1	SC	fin	100	0	100
AL161941.18	RP11-494B22	Hschr20_ctg1	SC	fin	100	0	100
AL117376.28	RP5-971B4	Hschr20_ctg1	SC	fin	100	0	100
AL118509.9	RP4-770C23	Hschr20_ctg1	SC	fin	100	0	100
AL049794.16	RP4-777L9	Hschr20_ctg1	SC	fin	100	0	100
AL355579.12	RP1-146C10	Hschr20_ctg1	SC	fin	100	0	100
AL135938.9	RP3-348M17	Hschr20_ctg1	SC	fin	108	0	100
AL034428.4	RP4-705D16	Hschr20_ctg1	SC	fin	100	0	100
AL121892.9	RP5-1195D24	Hschr20_ctg1	SC	fin	100	0	100
AL121592.14	RP4-765D23	Hschr20_ctg1	SC	fin	100	0	100
AL031684.14	RP5-917N8	Hschr20_ctg1	SC	fin	100	0	100
AL135940.11	RP5-896L12	Hschr20_ctg1	SC	fin	100	0	100
AL359511.16	RP1-298M8	Hschr20_ctg1	SC	fin	100	0	100
AL031675.4	RP4-751L1	Hschr20_ctg1	SC	fin	103	0	97.087	approved certificate; identity < 98%
AL121779.11	RP5-1094O14	Hschr20_ctg1	SC	fin	83	0	100
AL031664.1	RP4-531H16	Hschr20_ctg1	SC	fin	102	1	100
AL132765.38	RP11-462D18	Hschr20_ctg1	SC	fin	100	0	100
AL160071.16	RP4-803K15	Hschr20_ctg1	SC	fin	100	0	100
AL035045.5	RP5-905G11	Hschr20_ctg1	SC	fin	100	0	100
AL121585.22	RP11-504H3	Hschr20_ctg1	SC	fin	101	0	100	half-dovetail of >0bp and <=50bp
AL160411.25	RP4-726N1	Hschr20_ctg1	SC	fin	100	0	100
AL050321.11	RP4-717M23	Hschr20_ctg1	SC	fin	100	0	100
AL389897.4	RP11-110C10	Hschr20_ctg1	SC	fin	100	0	100
AL049646.19	RP4-568F9	Hschr20_ctg1	SC	fin	97	0	100
AL158176.6	RP4-779L5	Hschr20_ctg1	SC	fin	104	0	100
AL121893.21	RP11-189K21	Hschr20_ctg1	SC	fin	95	0	100
AL121900.26	RP11-379J5	Hschr20_ctg1	SC	fin	100	0	100
AL121780.11	RP11-555E18	Hschr20_ctg1	SC	fin	100	0	100
AL035563.19	RP5-1068E13	Hschr20_ctg1	SC	fin	100	0	100
AL135936.11	RP11-3K6	Hschr20_ctg1	SC	fin	100	0	100
AL136090.12	RP11-97N19	Hschr20_ctg1	SC	fin	100	0	100
AL049647.7	RP5-1027G4	Hschr20_ctg1	SC	fin	104	0	100
AL139827.7	RP5-1040N20	Hschr20_ctg1	SC	fin	104	0	100
AL034425.9	RP4-542H21	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL139429.8	RP11-110K14	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL121830.25	RP4-718D20	Hschr20_ctg1	SC	fin	100	0	100
AL121761.5	RP1-122P22	Hschr20_ctg1	SC	fin	104	0	100
AL132821.17	RP5-999L4	Hschr20_ctg1	SC	fin	98	0	100
AL049538.9	RP5-1175I6	Hschr20_ctg1	SC	fin	104	0	100
AL035454.18	RP5-1002M8	Hschr20_ctg1	SC	fin	100	0	100
AL049648.9	RP5-1178H5	Hschr20_ctg1	SC	fin	98	1	100	simple sequence in gap
AL121721.20	RP5-1096J16	Hschr20_ctg1	SC	fin	100	0	100
AL158849.16	RP4-747D9	Hschr20_ctg1	SC	fin	100	0	100
AL161658.21	RP11-470C13	Hschr20_ctg1	SC	fin	100	0	100
AL121896.11	RP11-287B20	Hschr20_ctg1	SC	fin	100	0	100
AL078634.24	RP5-1049G11	Hschr20_ctg1	SC	fin	100	0	100
AL157718.10	RP11-23O13	Hschr20_ctg1	SC	fin	100	0	100
AL109953.24	RP4-746H2	Hschr20_ctg1	SC	fin	100	0	100
AL133465.30	RP5-1177M21	Hschr20_ctg1	SC	fin	100	0	100
AL121759.25	RP5-872K7	Hschr20_ctg1	SC	fin	100	0	100
AL110120.11	RP4-777D9	Hschr20_ctg1	SC	fin	97	0	100
AL117332.16	RP1-198K11	Hschr20_ctg1	SC	fin	100	0	100
AL158013.25	RP11-227D2	Hschr20_ctg1	SC	fin	100	0	100
AL133325.20	RP5-984P4	Hschr20_ctg1	SC	fin	100	0	100
AL121590.11	RP1-167O22	Hschr20_ctg1	SC	fin	100	0	100
AL035562.14	RP5-1065O2	Hschr20_ctg1	SC	fin	100	0	100
AL121921.7	RP4-560I16	Hschr20_ctg1	SC	fin	100	0	100
AL117375.12	RP1-80E14	Hschr20_ctg1	SC	fin	100	0	100
AL109807.16	RP5-1185K9	Hschr20_ctg1	SC	fin	100	0	100
AL157412.16	RP11-125P18	Hschr20_ctg1	SC	fin	100	0	100
AL035258.10	RP5-1097P24	Hschr20_ctg1	SC	fin	100	0	100
AL049737.4	RP5-828K20	Hschr20_ctg1	SC	fin	100	0	100
AL356733.8	RP11-260O14	Hschr20_ctg1	SC	fin	100	0	100
AL121912.18	RP5-1004I9	Hschr20_ctg1	SC	fin	100	0	100
AL133464.12	RP11-500O11	Hschr20_ctg1	SC	fin	100	0	100
AL445603.12	XXyac-YR31BE7	Hschr20_ctg1	SC	fin	100	0	100
AL356742.12	RP11-216C10	Hschr20_ctg1	SC	fin	97	0	98.969	half-dovetail of >0bp and <=50bp; identity < 99.6%
AL121722.9	RP4-788L20	Hschr20_ctg1	SC	fin	101	0	100
AL158175.7	RP11-359G22	Hschr20_ctg1	SC	fin	101	0	100
AL049738.4	RP5-944N18	Hschr20_ctg1	SC	fin	92	1	100	half-dovetail of >0bp and <=50bp
AL353132.18	RP11-189G24	Hschr20_ctg1	SC	fin	100	0	100
AL049651.2	RP4-753D10	Hschr20_ctg1	SC	fin	100	0	100
AL118508.27	RP4-737E23	Hschr20_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL357508.10	RP11-457K6	Hschr20_ctg1	SC	fin	100	0	100
AL390037.16	RP5-851M4	Hschr20_ctg1	SC	fin	100	0	100
AL096677.21	RP3-322G13	Hschr20_ctg1	SC	fin	103	0	100
AL109954.15	RP3-333B15	Hschr20_ctg1	SC	fin	100	0	100
AL121894.26	RP11-218C14	Hschr20_ctg1	SC	fin	100	0	100
AL359433.7	RP1-234M6	Hschr20_ctg1	SC	fin	100	0	100
AL591074.10	60D10	Hschr20_ctg1	SC	fin	96	1	100	simple sequence in gap
AL359967.5	RP11-1P13	Hschr20_ctg1	SC	fin	100	0	100
AL121831.19	RP5-850N15	Hschr20_ctg1	SC	fin	100	0	100
AL133466.22	RP5-831C21	Hschr20_ctg1	SC	fin	100	0	100
AL110503.2	RP5-1100I6	Hschr20_ctg1	SC	fin	100	0	100
AL109830.11	RP5-977K12	Hschr20_ctg1	SC	fin	100	0	100
AL158090.3	RP4-564O4	Hschr20_ctg1	SC	fin	100	0	100
AL034426.5	RP4-580G13	Hschr20_ctg1	SC	fin	100	0	100
AL157413.18	RP11-526K17	Hschr20_ctg1	SC	fin	100	0	100
AL049594.4	RP5-860P4	Hschr20_ctg1	SC	fin	100	0	100
AL121925.10	RP5-966J20	Hschr20_ctg1	SC	fin	100	0	100
AL353582.16	CTD-2190D5	Hschr20_ctg1	SC	fin	100	0	100
AL035661.16	RP4-568C11	Hschr20_ctg1	SC	fin	104	0	100
AL080312.14	RP5-1025A1	Hschr20_ctg1	SC	fin	100	0	100
AL035252.5	RP4-738P15	Hschr20_ctg1	SC	fin	100	0	100
AL121772.19	RP5-965G21	Hschr20_ctg1	SC	fin	100	0	100
AL353812.13	RP11-384D7	Hschr20_ctg1	SC	fin	100	1	98.000	identity < 99.6%; alignment length < 2000
AL031672.13	RP4-691N24	Hschr20_ctg1	SC	fin	100	0	100
AL161802.15	RP11-96L6	Hschr20_ctg1	SC	fin	100	0	100
AL031673.19	RP4-694B14	Hschr20_ctg1	SC	fin	100	0	100
AL390198.17	RP13-401N8	Hschr20_ctg1	SC	fin	100	0	100	alignment length < 2000
AL078587.18	RP4-760C5	Hschr20_ctg1	SC	fin	100	0	100
AL450124.7	CTD-2514C3	Hschr20_ctg1	SC	fin	100	0	100
AL391119.8	RP13-329D4	Hschr20_ctg1	SC	fin	100	0	100
AL121904.13	RP3-410C9	Hschr20_ctg1	SC	fin	100	0	100
AL358116.7	RP11-108H13	Hschr20_ctg1	SC	fin
?	CH17-326K24	Hschr20_ctg1
GAP	CENTROMERE	3000000
FP565326.1	RP11-1114A12	Hschr20_ctg1_1	SC	pre	0	0	0	one or more unfinished sequences; no overlap present
AL121762.13	RP4-610C12	Hschr20_ctg1_1	SC	fin	100	0	100
AL441988.11	RP11-348I14	Hschr20_ctg1_1	SC	fin
?	WI2-2572J24	Hschr20_ctg1_1
GAP	type-3
FP565421.1	ABC8-2141940I11	Hschr20_ctg2	SC	pre	10303	18	99.651	alignment exists; one or more unfinished sequences
AL121723.36	RP5-854E16	Hschr20_ctg2	SC	fin	100	0	100
AL031650.22	RP5-1018D12	Hschr20_ctg2	SC	fin	100	0	100
AL121751.12	RP5-1093G12	Hschr20_ctg2	SC	fin	100	0	100
AL110115.38	RP3-324O17	Hschr20_ctg2	SC	fin	100	0	100
AL117381.32	RP5-857M17	Hschr20_ctg2	SC	fin	100	0	100
AL160175.5	RP11-243J16	Hschr20_ctg2	SC	fin	100	0	100
AL359765.6	RP11-1147I19	Hschr20_ctg2	SC	fin	100	0	100
AL031658.11	RP1-310O13	Hschr20_ctg2	SC	fin	100	0	100
AL353092.6	RP1-180I13	Hschr20_ctg2	SC	fin	100	0	100
AL049539.21	RP5-836N17	Hschr20_ctg2	SC	fin	100	0	100
AL121897.32	RP11-392M18	Hschr20_ctg2	SC	fin	100	0	100	half-dovetail of >0bp and <=50bp
AL354800.4	RP1-316I5	Hschr20_ctg2	SC	fin	100	0	100
AL121583.25	RP11-358N2	Hschr20_ctg2	SC	fin	100	0	100
AL034550.31	RP5-1184F4	Hschr20_ctg2	SC	fin	100	0	100
AL133343.23	RP11-410N8	Hschr20_ctg2	SC	fin	100	0	100
CR383701.1	?	Hschr20_ctg2	SC	fin	100	0	100
BX640505.3	WI2-82760E2	Hschr20_ctg2	SC	fin	100	0	100
CR383702.1	?	Hschr20_ctg2	SC	fin	97	0	98.969	half-dovetail of >0bp and <=50bp; identity < 99.6%
AL035071.17	RP5-1085F17	Hschr20_ctg2	SC	fin	100	0	100
AL390298.13	RP11-75I24	Hschr20_ctg2	SC	fin	100	0	100
AL139826.15	RP11-60H7	Hschr20_ctg2	SC	fin	100	0	100
AL121756.14	RP4-726C3	Hschr20_ctg2	SC	fin	100	0	100
AL137225.12	RP4-733O23	Hschr20_ctg2	SC	fin	100	0	100
AL121901.20	RP11-49G10	Hschr20_ctg2	SC	fin	100	0	100
AL355392.7	RP5-1187J4	Hschr20_ctg2	SC	fin	99	0	100
AL162505.20	RP11-327D19	Hschr20_ctg2	SC	fin	100	0	100
AL034421.7	RP5-1137F22	Hschr20_ctg2	SC	fin	100	0	100
AL121906.18	RP1-63M2	Hschr20_ctg2	SC	fin	100	0	100
AL050349.27	RP4-553F4	Hschr20_ctg2	SC	fin	100	0	100
AL034549.19	RP5-1125A11	Hschr20_ctg2	SC	fin	100	0	100
AL031668.23	RP1-64K7	Hschr20_ctg2	SC	fin	100	0	100
AL035458.35	RP4-785G19	Hschr20_ctg2	SC	fin	100	0	100
AL356299.16	CTD-3216D2	Hschr20_ctg2	SC	fin	100	0	100
AL109923.29	RP3-468O1	Hschr20_ctg2	SC	fin	100	0	100
AL136173.24	RP5-914B9	Hschr20_ctg2	SC	fin	101	0	100	half-dovetail of >0bp and <=50bp
AL118520.26	RP11-346K17	Hschr20_ctg2	SC	fin	100	0	100
AL109824.24	RP5-1181N3	Hschr20_ctg2	SC	fin	100	0	100
AL049709.18	RP1-18C9	Hschr20_ctg2	SC	fin	100	0	100
AL133324.13	RP5-1161H23	Hschr20_ctg2	SC	fin	100	0	100
AL132825.35	RP4-756N5	Hschr20_ctg2	SC	fin	100	0	100
AL135844.9	RP5-1154G13	Hschr20_ctg2	SC	fin	100	0	100
AL356652.19	RP11-42O4	Hschr20_ctg2	SC	fin	100	0	100
AL121753.32	RP4-614O4	Hschr20_ctg2	SC	fin	100	0	100	alignment length < 2000
AL121752.13	RP3-468N4	Hschr20_ctg2	SC	fin	100	0	100
AL389874.1	?	Hschr20_ctg2	SC	fin	99	1	100	simple sequence in gap
AL121586.31	RP3-477O4	Hschr20_ctg2	SC	fin	100	0	100
AL389875.1	?	Hschr20_ctg2	SC	fin	100	0	100
AL109827.8	RP1-309K20	Hschr20_ctg2	SC	fin	100	0	100
AL357374.11	RP11-353C18	Hschr20_ctg2	SC	fin	100	0	100
AL356422.12	RP11-381P2	Hschr20_ctg2	SC	fin	100	0	100
AL078461.38	RP5-901O8	Hschr20_ctg2	SC	fin	100	0	100
AL109965.34	RP5-1121G12	Hschr20_ctg2	SC	fin	102	0	100
AL359828.13	RP5-954P9	Hschr20_ctg2	SC	fin	100	0	100
AL035420.15	RP4-550H1	Hschr20_ctg2	SC	fin	100	0	100
AL121895.26	RP11-234K24	Hschr20_ctg2	SC	fin	100	0	100
AL512784.6	CTD-2301L1	Hschr20_ctg2	SC	fin
?	R19IB10_F1	Hschr20_ctg2
AL450465.12	RP3-493M24	Hschr20_ctg2	SC	fin	100	0	100
AL445705.8	RP5-996C2	Hschr20_ctg2	SC	fin	100	0	100
AL390374.16	CTD-2182L9	Hschr20_ctg2	SC	fin	100	0	100
AL050318.13	RP5-977B1	Hschr20_ctg2	SC	fin	100	0	100
AL031662.26	RP3-460J8	Hschr20_ctg2	SC	fin	101	0	100
AL132768.15	RP3-469A13	Hschr20_ctg2	SC	fin	99	1	100	simple sequence in gap
AL391602.6	RP11-231F10	Hschr20_ctg2	SC	fin	97	0	100	half-dovetail of >0bp and <=50bp
AL079335.29	RP1-132F21	Hschr20_ctg2	SC	fin	100	0	100
AL365505.15	RP11-382A12	Hschr20_ctg2	SC	fin	100	0	100
AL391114.12	RP11-332A4	Hschr20_ctg2	SC	fin	100	0	100
AL136172.16	RP4-621N11	Hschr20_ctg2	SC	fin	100	0	100
AL031659.9	RP3-343K2	Hschr20_ctg2	SC	fin	100	0	100
AL034422.24	RP5-1141E15	Hschr20_ctg2	SC	fin	100	0	100
AL390014.4	RP4-681F2	Hschr20_ctg2	SC	fin	100	0	100
AL133293.28	RP5-823N20	Hschr20_ctg2	SC	fin	100	0	100
AL132873.9	RP4-592G19	Hschr20_ctg2	SC	fin	100	0	100	half-dovetail of >0bp and <=50bp
AL109614.28	RP11-425M5	Hschr20_ctg2	SC	fin	88	0	100
AL162293.22	RP4-640H8	Hschr20_ctg2	SC	fin	100	0	100
AL118499.39	RP5-1168M15	Hschr20_ctg2	SC	fin	96	0	100
AL023804.4	RP4-633O20	Hschr20_ctg2	SC	fin	100	0	100
AL109964.20	RP5-1118M15	Hschr20_ctg2	SC	fin	100	0	100
AL109823.23	RP5-1057B20	Hschr20_ctg2	SC	fin	104	0	100
AL031651.33	RP5-1054A22	Hschr20_ctg2	SC	fin	100	0	100
AL359555.9	CTD-2308N23	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL583962.5	?	Hschr20_ctg2	SC	fin	100	0	100
AL499625.4	LA20-66F10	Hschr20_ctg2	SC	fin	100	0	100	alignment length < 2000
AL391095.6	RP13-218F6	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%; alignment length < 2000
AL049868.20	RP5-927M24	Hschr20_ctg2	SC	fin	100	0	100
AL035419.12	RP5-1100H13	Hschr20_ctg2	SC	fin	100	0	100
AL133519.28	RP11-122O1	Hschr20_ctg2	SC	fin	100	0	100
AL031657.5	RP1-28F12	Hschr20_ctg2	SC	fin	100	0	100
AL121889.8	RP5-1076E17	Hschr20_ctg2	SC	fin	100	0	100
AL023803.3	RP4-616B8	Hschr20_ctg2	SC	fin	100	0	100
AL136990.15	RP11-15D15	Hschr20_ctg2	SC	fin	100	0	100
AL035251.11	RP4-705O1	Hschr20_ctg2	SC	fin	100	0	100
AL121588.24	RP1-54G6	Hschr20_ctg2	SC	fin	100	0	100
AL031661.28	RP3-404H4	Hschr20_ctg2	SC	fin	96	0	100
AL109611.10	RP4-600E6	Hschr20_ctg2	SC	fin	100	0	100
AL132981.12	RP1-80L13	Hschr20_ctg2	SC	fin	100	0	100
AL139163.16	RP11-523O15	Hschr20_ctg2	SC	fin	100	0	100
AL118523.18	RP5-1031J8	Hschr20_ctg2	SC	fin	100	0	100
AL133419.15	RP11-101E14	Hschr20_ctg2	SC	fin	100	0	100
AL009050.9	RP1-191L6	Hschr20_ctg2	SC	fin	100	0	100
AL121828.17	RP5-892M9	Hschr20_ctg2	SC	fin	100	0	100
AL031256.1	RP3-409O10	Hschr20_ctg2	SC	fin	100	0	100
AL118521.18	RP4-690O1	Hschr20_ctg2	SC	fin	100	0	100
AL049691.18	RP5-1123D4	Hschr20_ctg2	SC	fin	100	0	100
AL034552.23	RP5-824J5	Hschr20_ctg2	SC	fin	100	0	100
AL035665.32	RP4-644L1	Hschr20_ctg2	SC	fin	100	0	100
AL034431.16	RP5-970A17	Hschr20_ctg2	SC	fin	97	0	100
AL050317.16	RP1-94E24	Hschr20_ctg2	SC	fin	101	0	100
AL031660.16	RP3-387E22	Hschr20_ctg2	SC	fin	100	0	100
AL035652.8	RP1-1J6	Hschr20_ctg2	SC	fin	100	0	100
AL022394.3	RP3-511B24	Hschr20_ctg2	SC	fin	100	0	100
AL031257.1	RP4-796I11	Hschr20_ctg2	SC	fin	100	1	100	simple sequence in gap
AL132654.15	RP3-450M14	Hschr20_ctg2	SC	fin	100	0	100
AL031667.21	RP4-620E11	Hschr20_ctg2	SC	fin	100	0	100
AL121674.12	RP4-540H1	Hschr20_ctg2	SC	fin	100	0	100
AL031669.28	RP4-661I20	Hschr20_ctg2	SC	fin	100	0	100
AL354812.7	RP3-508O2	Hschr20_ctg2	SC	fin	100	0	100
AL133229.40	RP5-1167E19	Hschr20_ctg2	SC	fin	100	0	100
AL359984.5	RP11-179J15	Hschr20_ctg2	SC	fin	100	0	100
AL031654.6	RP1-128O17	Hschr20_ctg2	SC	fin	100	0	100
AL049812.14	RP5-1121H13	Hschr20_ctg2	SC	fin	100	0	100
AL024473.1	RP4-707K17	Hschr20_ctg2	SC	fin	100	0	100
AL035459.6	RP1-81G23	Hschr20_ctg2	SC	fin	100	0	100
Z93942.1	RP1-230I19	Hschr20_ctg2	SC	fin	100	0	100
AL022239.1	RP1-3E5	Hschr20_ctg2	SC	fin	100	0	100
AL109826.25	RP1-272H18	Hschr20_ctg2	SC	fin	100	0	100
AL035666.7	RP4-730D4	Hschr20_ctg2	SC	fin	100	0	100
AL031656.10	RP1-232N11	Hschr20_ctg2	SC	fin	100	0	100
AL136461.10	RP11-32G22	Hschr20_ctg2	SC	fin	100	0	100
AL121763.25	RP5-914M10	Hschr20_ctg2	SC	fin	100	0	100
AL031676.3	RP4-753D4	Hschr20_ctg2	SC	fin	98	0	100
AL117374.39	RP1-47A22	Hschr20_ctg2	SC	fin	100	0	100
AL359695.6	RP11-151A11	Hschr20_ctg2	SC	fin	100	0	100
AL021395.16	RP1-269M15	Hschr20_ctg2	SC	fin	104	0	100
AL138806.7	RP5-1121P14	Hschr20_ctg2	SC	fin	105	0	100
AL031681.16	RP5-862K6	Hschr20_ctg2	SC	fin	100	0	100
Z98752.16	RP1-138B7	Hschr20_ctg2	SC	fin	100	0	100
AL121886.22	RP5-1028D15	Hschr20_ctg2	SC	fin	100	0	100
AL161944.22	RP5-1079N22	Hschr20_ctg2	SC	fin	100	0	100
AL035089.21	RP5-1030M6	Hschr20_ctg2	SC	fin	100	0	100
AL353797.5	RP3-485M8	Hschr20_ctg2	SC	fin	100	0	100
AL121587.19	RP3-495O3	Hschr20_ctg2	SC	fin	101	0	100
AL034419.22	RP5-1108D11	Hschr20_ctg2	SC	fin	103	0	99.029	identity < 99.6%
AL035447.6	RP5-1183I21	Hschr20_ctg2	SC	fin	100	0	100
AL035462.21	RP5-995J12	Hschr20_ctg2	SC	fin	101	0	100
AL117382.28	RP5-881L22	Hschr20_ctg2	SC	fin	100	0	100
AL132772.14	RP5-1013A22	Hschr20_ctg2	SC	fin	100	0	100
Z97053.2	RP1-179M20	Hschr20_ctg2	SC	fin	100	0	100
AL139352.16	RP11-445H22	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL118522.32	RP4-781B1	Hschr20_ctg2	SC	fin	100	0	100
AL008725.1	RP1-148E22	Hschr20_ctg2	SC	fin	159	0	100
AL109839.11	RP5-1069P2	Hschr20_ctg2	SC	fin	34296	2	99.997	simple sequence in gap
Z93016.2	RP1-211D12	Hschr20_ctg2	SC	fin	100	0	100
AL049767.12	RP1-172H20	Hschr20_ctg2	SC	fin	100	0	100
AL035660.16	RP1-300I2	Hschr20_ctg2	SC	fin	100	0	100
AL021578.4	RP3-453C12	Hschr20_ctg2	SC	fin	102	0	100
AL031663.2	RP3-461P17	Hschr20_ctg2	SC	fin	100	0	100
AL121778.12	RP5-839B11	Hschr20_ctg2	SC	fin	100	0	100
AL031671.12	RP4-688G8	Hschr20_ctg2	SC	fin	100	0	100	alignment length < 2000
AL109656.12	RP4-601O1	Hschr20_ctg2	SC	fin	432	1	99.537	identity < 99.6%; alignment length < 2000
AL050348.22	RP3-447F3	Hschr20_ctg2	SC	fin	100	0	100	alignment length < 2000
AL008726.3	RP3-337O18	Hschr20_ctg2	SC	fin	100	0	100
AL162458.10	RP11-465L10	Hschr20_ctg2	SC	fin	100	0	100
AL035662.65	RP4-599F21	Hschr20_ctg2	SC	fin	100	0	100
AL031687.17	RP5-998H6	Hschr20_ctg2	SC	fin	100	0	100
AL445286.12	RP5-1005L2	Hschr20_ctg2	SC	fin	100	0	100
AL133227.15	RP11-394O2	Hschr20_ctg2	SC	fin	100	0	100
AL031686.2	RP5-981L23	Hschr20_ctg2	SC	fin	100	0	100
AL354745.11	RP11-179N14	Hschr20_ctg2	SC	fin	100	0	100
AL034424.9	RP1-257E24	Hschr20_ctg2	SC	fin	100	0	100
AL133520.5	RP1-101A2	Hschr20_ctg2	SC	fin	100	0	100
AL031055.1	RP1-28H20	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL359506.8	CTD-2007A7	Hschr20_ctg2	SC	fin	100	0	100
AL354766.17	RP11-323C15	Hschr20_ctg2	SC	fin	100	0	100
AL121776.19	RP5-1050K3	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL359434.15	RP11-314A4	Hschr20_ctg2	SC	fin	100	0	100	alignment length < 2000
AL022342.7	RP1-29M10	Hschr20_ctg2	SC	fin	100	0	100	alignment length < 2000
AL031666.6	RP4-569M23	Hschr20_ctg2	SC	fin	101	0	100
AL109825.23	RP1-148H17	Hschr20_ctg2	SC	fin	100	0	100
AL353777.18	RP11-456N23	Hschr20_ctg2	SC	fin	114	0	100
AL021394.10	RP1-237J2	Hschr20_ctg2	SC	fin	100	0	100
AL034418.5	RP5-1049G16	Hschr20_ctg2	SC	fin	100	0	100
AL354813.31	CTD-2653D5	Hschr20_ctg2	SC	fin	100	0	100
AL121777.39	RP5-1057D4	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
Z95330.11	RP1-73E16	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL357558.6	RP11-347D21	Hschr20_ctg2	SC	fin	100	0	100
AL139351.37	RP11-321P16	Hschr20_ctg2	SC	fin	100	0	100
AL136102.10	RP3-453O12	Hschr20_ctg2	SC	fin	100	0	100
AL133341.12	RP3-342O24	Hschr20_ctg2	SC	fin	101	0	100
AL121888.20	RP5-1050C22	Hschr20_ctg2	SC	fin	100	0	100
AL137078.20	RP1-66N13	Hschr20_ctg2	SC	fin	100	0	100
AL049541.24	RP5-991B18	Hschr20_ctg2	SC	fin	100	0	100
AL445192.3	RP11-269H4	Hschr20_ctg2	SC	fin	100	0	100
AL035106.28	RP5-998C11	Hschr20_ctg2	SC	fin	100	0	100
AL133342.14	RP5-906C1	Hschr20_ctg2	SC	fin	100	0	100
AL049537.48	RP5-1164I10	Hschr20_ctg2	SC	fin	100	0	100
AL121903.13	RP1-155G6	Hschr20_ctg2	SC	fin	100	0	100
AL133174.15	RP3-470L14	Hschr20_ctg2	SC	fin	98	1	100
AL357560.11	RP11-120I11	Hschr20_ctg2	SC	fin	100	0	100
AL049766.14	RP4-686N3	Hschr20_ctg2	SC	fin	101	0	100
AL121786.10	RP5-993C19	Hschr20_ctg2	SC	fin	101	0	100
AL035685.21	RP4-791K14	Hschr20_ctg2	SC	fin	100	0	100
AL118525.17	RP11-298O6	Hschr20_ctg2	SC	fin	100	0	100
AL035683.9	RP5-1063B2	Hschr20_ctg2	SC	fin	100	0	100
AL162615.13	RP5-1041C10	Hschr20_ctg2	SC	fin	100	0	100
AL031685.18	RP5-963K23	Hschr20_ctg2	SC	fin	100	0	100
AL121712.27	RP4-710H13	Hschr20_ctg2	SC	fin	100	0	100
AL034423.21	RP5-1185N5	Hschr20_ctg2	SC	fin	100	0	100
AL161937.13	RP11-112L6	Hschr20_ctg2	SC	fin	100	0	100
AL354889.14	RP11-290F20	Hschr20_ctg2	SC	fin	100	0	100
AL034429.1	RP5-894K16	Hschr20_ctg2	SC	fin	101	0	100
AL133230.25	RP4-530I15	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL353653.19	RP11-244L4	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL031680.20	RP5-850H21	Hschr20_ctg2	SC	fin	100	0	100
AL133228.18	RP5-1071L10	Hschr20_ctg2	SC	fin	100	0	100
AL034553.12	RP5-914P20	Hschr20_ctg2	SC	fin	100	0	100
AL050404.3	RP5-955M13	Hschr20_ctg2	SC	fin	100	0	100
AL121785.48	RP4-811M8	Hschr20_ctg2	SC	fin	100	0	100
AL121915.8	RP5-1193N1	Hschr20_ctg2	SC	fin	100	0	100
AL035457.13	RP5-1106N18	Hschr20_ctg2	SC	fin	100	0	100
AL079339.11	RP5-906P16	Hschr20_ctg2	SC	fin	100	0	100
AL035682.16	RP5-1009H6	Hschr20_ctg2	SC	fin	101	0	100
AL132866.29	RP5-994O24	Hschr20_ctg2	SC	fin	101	0	100
AL035684.25	RP5-1114A1	Hschr20_ctg2	SC	fin	100	0	100
AL138807.12	RP5-827A12	Hschr20_ctg2	SC	fin	100	0	100
AL353799.14	RP5-1019A8	Hschr20_ctg2	SC	fin	100	0	100
AL034420.16	RP5-1112F19	Hschr20_ctg2	SC	fin	100	0	100
AL356354.10	RP4-651A20	Hschr20_ctg2	SC	fin	100	0	100
AL035072.16	RP4-756P4	Hschr20_ctg2	SC	fin	100	0	100
AL109984.14	RP5-831D17	Hschr20_ctg2	SC	fin	111	0	100
AL121771.17	RP4-548G19	Hschr20_ctg2	SC	fin	100	0	100
AL121923.7	RP4-698O15	Hschr20_ctg2	SC	fin	100	0	100
AL035686.15	RP5-965N20	Hschr20_ctg2	SC	fin	100	0	100
AL109977.7	RP4-591F14	Hschr20_ctg2	SC	fin	100	0	100
AL109610.7	RP4-583K8	Hschr20_ctg2	SC	fin	91	0	100
AL049765.16	RP5-1022J11	Hschr20_ctg2	SC	fin	97	0	100
AL049736.10	RP4-723E3	Hschr20_ctg2	SC	fin	100	0	100
AL031674.1	RP4-715N11	Hschr20_ctg2	SC	fin	100	0	100
AL161945.31	RP4-606D23	Hschr20_ctg2	SC	fin	100	0	100
AL121902.13	RP11-80K6	Hschr20_ctg2	SC	fin	100	0	100
AL050316.15	RP5-911I5	Hschr20_ctg2	SC	fin	100	0	100
AL391097.13	RP11-15M15	Hschr20_ctg2	SC	fin	2000	1	99.750
BX276189.1	RP4-678D15	Hschr20_ctg2	SC	fin	2000	0	100
AL354772.4	RP4-705J15	Hschr20_ctg2	SC	fin	100	0	100
AL109930.8	RP4-669H2	Hschr20_ctg2	SC	fin	100	0	100
AL354993.24	RP5-823G15	Hschr20_ctg2	SC	fin	100	0	100
AL157838.24	RP4-724E16	Hschr20_ctg2	SC	fin	42233	12	99.967	simple sequence in gap
AC005808.1	?	Hschr20_ctg2	JGI	fin	2297	2	99.826	simple sequence in gap
AC005914.1	?	Hschr20_ctg2	JGI	fin	1259	0	100
AC006076.1	?	Hschr20_ctg2	JGI	fin	2320	0	100
AC004762.1	?	Hschr20_ctg2	JGI	fin	871	0	99.885
AC005220.1	?	Hschr20_ctg2	JGI	fin	1385	0	100
AC004501.1	?	Hschr20_ctg2	JGI	fin	100	0	98.000	identity < 99.6%; alignment length < 2000
AL354801.5	RP4-700G13	Hschr20_ctg2	SC	fin	100	0	100
AL138805.8	RP5-1075G21	Hschr20_ctg2	SC	fin	100	0	100
AL133335.29	RP5-1162C3	Hschr20_ctg2	SC	fin	100	0	100
AL389883.9	RP11-126L5	Hschr20_ctg2	SC	fin	100	0	100
AL121922.16	RP4-647O12	Hschr20_ctg2	SC	fin	100	0	100
AL442131.2	RP11-66F1	Hschr20_ctg2	SC	fin	100	0	100
AL162292.20	RP11-6L15	Hschr20_ctg2	SC	fin	100	0	100
AL118501.22	RP5-1191N16	Hschr20_ctg2	SC	fin	101	0	100
AL035667.12	RP4-805C22	Hschr20_ctg2	SC	fin	102	0	100
AL133420.28	RP5-904D7	Hschr20_ctg2	SC	fin	100	0	100
AL138809.18	RP5-981M18	Hschr20_ctg2	SC	fin	101	0	100
AL162294.8	RP5-852L11	Hschr20_ctg2	SC	fin	100	0	100
AL121593.10	RP4-800C24	Hschr20_ctg2	SC	fin	100	0	100
AL158015.9	RP11-195N11	Hschr20_ctg2	SC	fin	100	0	100
AL035663.18	RP4-611N7	Hschr20_ctg2	SC	fin	100	0	100
AL161801.11	RP11-46G14	Hschr20_ctg2	SC	fin	100	0	100
AL121826.11	RP5-1010E17	Hschr20_ctg2	SC	fin	100	0	100
AL160413.7	RP5-837G17	Hschr20_ctg2	SC	fin	94	0	100	half-dovetail of >0bp and <=50bp
AL356388.9	CTD-2022J23	Hschr20_ctg2	SC	fin	100	0	100
AL109829.21	RP5-832E24	Hschr20_ctg2	SC	fin	100	0	100
AL109828.22	RP4-586J11	Hschr20_ctg2	SC	fin	100	0	100
AL121591.3	RP4-706G20	Hschr20_ctg2	SC	fin	103	0	99.029	identity < 99.6%
AL353640.7	RP11-458E15	Hschr20_ctg2	SC	fin	100	0	100
AL117383.19	RP5-885A10	Hschr20_ctg2	SC	fin	100	0	100
AL139824.22	RP11-380D15	Hschr20_ctg2	SC	fin	100	0	100
AL359534.10	RP11-65K20	Hschr20_ctg2	SC	fin	100	0	100
AL121914.31	RP5-1167H4	Hschr20_ctg2	SC	fin	100	0	100
AL109806.22	RP5-1153D9	Hschr20_ctg2	SC	fin	100	0	100
AL137162.25	RP5-843L14	Hschr20_ctg2	SC	fin	100	0	100
AL121920.21	RP4-539E24	Hschr20_ctg2	SC	fin	100	0	100
AL133232.15	RP5-897D18	Hschr20_ctg2	SC	fin	100	0	100
AL161657.22	RP11-46O3	Hschr20_ctg2	SC	fin	100	0	100
AL117380.28	RP4-749H19	Hschr20_ctg2	SC	fin	100	0	100
AL157414.19	RP11-560A15	Hschr20_ctg2	SC	fin	98	1	100	simple sequence in gap
AL122058.19	RP4-813D12	Hschr20_ctg2	SC	fin	100	0	100
AL135939.12	RP3-481F12	Hschr20_ctg2	SC	fin	100	0	100
AL109955.38	RP4-800J21	Hschr20_ctg2	SC	fin	100	0	100
AL160176.3	RP4-579F20	Hschr20_ctg2	SC	fin	100	0	100
AL035541.15	RP4-718J7	Hschr20_ctg2	SC	fin	100	0	100
AL161943.11	RP5-1007E6	Hschr20_ctg2	SC	fin	100	0	100
AL121913.4	RP5-1059L7	Hschr20_ctg2	SC	fin	100	0	100
AL162291.14	RP11-402F1	Hschr20_ctg2	SC	fin	100	0	100
AL354984.17	RP13-379L11	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL354776.15	RP11-196N14	Hschr20_ctg2	SC	fin	100	0	100
AL354834.17	RP11-109J9	Hschr20_ctg2	SC	fin	100	0	100
AL035455.30	RP5-1018E9	Hschr20_ctg2	SC	fin	100	0	100
AL118513.17	RP4-685L9	Hschr20_ctg2	SC	fin	100	0	100
AL050327.6	RP5-907D15	Hschr20_ctg2	SC	fin	100	0	100
AL139349.37	RP11-261P9	Hschr20_ctg2	SC	fin	100	0	100
AL132655.13	RP4-806M20	Hschr20_ctg2	SC	fin	100	0	100
AL121917.20	RP1-309F20	Hschr20_ctg2	SC	fin	100	0	100
AL109840.24	RP4-543J19	Hschr20_ctg2	SC	fin	100	0	100
AL136532.22	RP11-379F14	Hschr20_ctg2	SC	fin	100	0	100
AL121919.20	RP3-492J12	Hschr20_ctg2	SC	fin	100	0	100
AL035250.20	RP4-614C15	Hschr20_ctg2	SC	fin	100	0	100
AL160410.24	RP11-136B8	Hschr20_ctg2	SC	fin	100	0	100
AL389889.11	RP11-164D18	Hschr20_ctg2	SC	fin	100	0	100
AL121908.16	RP4-719C8	Hschr20_ctg2	SC	fin	100	0	100
AL357503.12	RP5-899C14	Hschr20_ctg2	SC	fin	100	0	100
AL158092.30	RP5-884F15	Hschr20_ctg2	SC	fin	100	0	100
AL109928.33	RP4-551D2	Hschr20_ctg2	SC	fin	100	0	100
AL353677.8	RP11-231A2	Hschr20_ctg2	SC	fin	100	0	100
AL132822.15	RP5-1017F8	Hschr20_ctg2	SC	fin	100	0	100
AL035070.3	RP5-1043L13	Hschr20_ctg2	SC	fin	100	0	100
AL121918.26	RP3-342K12	Hschr20_ctg2	SC	fin	100	0	100
AL136143.9	RP3-399C22	Hschr20_ctg2	SC	fin	100	0	100
AL358237.13	RP3-407G6	Hschr20_ctg2	SC	fin	100	0	100
AL161940.6	RP11-459I16	Hschr20_ctg2	SC	fin	100	0	100
AL117372.35	RP5-1016A21	Hschr20_ctg2	SC	fin	100	0	100
AL139348.3	RP11-151E14	Hschr20_ctg2	SC	fin	100	0	100
AL050326.3	RP5-836E13	Hschr20_ctg2	SC	fin	100	0	99.000	identity < 99.6%
AL121910.26	RP5-827L5	Hschr20_ctg2	SC	fin	100	0	100
AL121887.24	RP5-1040G13	Hschr20_ctg2	SC	fin	100	0	100
AL365229.13	RP11-723K16	Hschr20_ctg2	SC	fin	100	0	100
AL450463.20	RP13-299C14	Hschr20_ctg2	SC	fin	600	0	100
BX640515.3	WI2-8325B5	Hschr20_ctg2	SC	fin	3045	1	99.869	half-dovetail of >0bp and <=50bp
AL391316.7	901F10	Hschr20_ctg2	SC	fin	100	0	100
AL160412.14	RP5-827E24	Hschr20_ctg2	SC	fin	100	0	100
AL079336.27	RP4-662M14	Hschr20_ctg2	SC	fin	100	0	100
AL162457.11	RP11-429E11	Hschr20_ctg2	SC	fin	100	0	100
AL365401.20	RP11-489M19	Hschr20_ctg2	SC	fin	100	0	100
AL109911.47	RP5-1107C24	Hschr20_ctg2	SC	fin	100	0	100
AL137077.31	RP11-11M20	Hschr20_ctg2	SC	fin	100	0	100
AL078633.32	RP5-1005F21	Hschr20_ctg2	SC	fin	100	0	100
AL354836.13	RP11-157P1	Hschr20_ctg2	SC	fin	100	0	100
AL121832.56	RP5-908M14	Hschr20_ctg2	SC	fin	100	0	100
AL499627.23	RP13-379O24	Hschr20_ctg2	SC	fin	3384	0	99.764	alignment exists; one or more unfinished sequences; half-dovetail of >50bp
FP565321.1	ABC13-1044222L9	Hschr20_ctg2	SC	pre	11976	2	99.975	alignment exists; one or more unfinished sequences; half-dovetail of >50bp
AL449263.6	RP3-353C17	Hschr20_ctg2	SC	fin	2000	1	99.850	simple sequence in gap
BX640514.3	WI2-87327B8	Hschr20_ctg2	SC	fin	2000	0	100
BX640513.2	WI2-8792D10	Hschr20_ctg2	SC	fin	3501	0	99.800	alignment exists; one or more unfinished sequences; contained sequence
FP565797.1	ABC8-40869700O4	Hschr20_ctg2	SC	pre
GAP	type-3
FP565323.1	ABC13-48057300M21	hschr20_ctg5	SC	pre	4364	0	100	alignment exists; one or more unfinished sequences; contained sequence
AL450469.11	RP13-30A9	hschr20_ctg5	SC	fin	100	0	100
AL357033.19	RP11-93B14	hschr20_ctg5	SC	fin	100	0	99.000	identity < 99.6%
AL035669.43	RP5-885L7	hschr20_ctg5	SC	fin	100	0	100
AL117379.14	RP4-563E14	hschr20_ctg5	SC	fin	100	0	100
AL121673.41	RP11-305P22	hschr20_ctg5	SC	fin	100	0	100
AL096828.29	RP5-963E22	hschr20_ctg5	SC	fin	100	0	100
AL121827.34	RP11-261N11	hschr20_ctg5	SC	fin	100	0	100
AL353658.33	RP11-358D14	hschr20_ctg5	SC	fin	100	0	100
AL121829.30	RP4-697K14	hschr20_ctg5	SC	fin	100	0	100
AL121907.28	RP4-663D7	hschr20_ctg5	SC	fin	100	0	100
AL353715.21	CTD-3184A7	hschr20_ctg5	SC	fin	100	0	100
AL121845.20	RP4-583P15	hschr20_ctg5	SC	fin	100	0	100
AL158091.31	RP5-824A14	hschr20_ctg5	SC	fin	100	0	100
AL118506.27	RP4-591C20	hschr20_ctg5	SC	fin	100	0	100
AL356790.22	RP11-238J15	hschr20_ctg5	SC	fin	92	0	100	half-dovetail of >0bp and <=50bp
AL355803.16	RP13-152O15	hschr20_ctg5	SC	fin	100	0	100
AL590548.22	RP11-299N6	hschr20_ctg5	SC	fin	100	0	100
AL121581.41	RP5-1022E24	hschr20_ctg5	SC	fin	100	0	100
AL137028.9	RP11-476I15	hschr20_ctg5	SC	fin
GAP	type-3
GAP	TELOMERE	10000

NCBI