NCBI

Find a TPF

Join Legend: Click on the colored ball in the 'join' column to see alignment details.

tpf view for chr 17 (reference)
acc name ctg center status join align length gaps % id comments
GAP TELOMERE 10000  
AC108004.3 CTD-2348K1 HSCHR17_CTG1 WIBR fin joinred 25552 24 99.374 >2 gap of 25bp or more, not simple sequence
AC129507.10 RP11-1260E13 HSCHR17_CTG1 WIBR fin joinblack 20555 12 99.830 initial certificate; >0 gap of 50bp or more, not simple sequence
AC141424.4 RP13-803G22 HSCHR17_CTG1 WIBR fin joinyellow 34254 20 99.845 >0 gap of 25bp or more, not simple sequence
AC233274.2 ABC8-41097800F4 HSCHR17_CTG1 WUGSC fin
GAP TYPE-3    
AC015853.8 RP5-1029F21 HSCHR17_CTG2 WIBR fin joingreen 13701 1 99.825  
AC027455.22 RP11-411G7 HSCHR17_CTG2 WIBR fin joinyellow 8313 4 99.868 half-dovetail of >0bp and <=50bp
AC087392.10 RP11-676J12 HSCHR17_CTG2 WIBR fin joinblack 31967 31 99.650 initial certificate; >0 gap of 50bp or more, not simple sequence
AC036164.14 RP11-356I18 HSCHR17_CTG2 WIBR fin joinblack 8588 10 99.756 initial certificate; half-dovetail of >50bp
AC015884.15 RP11-216P6 HSCHR17_CTG2 WIBR fin joinblack 40753 52 99.585 initial certificate; >0 gap of 50bp or more, not simple sequence
AC016292.26 RP11-22G12 HSCHR17_CTG2 WIBR fin joinyellow 1713 0 99.942 alignment length < 2000
AC144836.3 XXFOS-84318G5 HSCHR17_CTG2 WIBR fin joinyellow 11487 6 99.861 >0 gap of 25bp or more, not simple sequence
AC032044.28 RP11-818O24 HSCHR17_CTG2 WIBR fin joingreen 12902 2 99.953 simple sequence in gap
AC100748.2 CTD-2231E3 HSCHR17_CTG2 WIBR fin joingreen 19478 5 99.928 simple sequence in gap
AC130343.7 RP11-961A15 HSCHR17_CTG2 WIBR fin joingreen 18010 6 99.883 simple sequence in gap
AC130689.8 CTD-2548O19 HSCHR17_CTG2 WIBR fin joingreen 86862 22 99.941 simple sequence in gap
AC099684.7 CTD-2545H1 HSCHR17_CTG2 WIBR fin joingreen 8723 6 99.828 simple sequence in gap
AC090617.16 RP11-667K14 HSCHR17_CTG2 WIBR fin joingreen 11358 3 99.947 simple sequence in gap
AL450226.1 RP5-1037N22 HSCHR17_CTG2 MPIMG fin joingreen 12327 0 100  
AC006435.7 RP1-59D14 HSCHR17_CTG2 WIBR fin joingreen 4170 0 99.928  
AC015799.23 RP11-135N5 HSCHR17_CTG2 WIBR fin joingreen 17459 4 99.931 simple sequence in gap
AC005696.1 RP11-74E22 HSCHR17_CTG2 WIBR fin joingreen 15631 8 99.827 simple sequence in gap
AC002316.2 CTB-11O23 HSCHR17_CTG2 WIBR fin joingreen 3367 2 100 simple sequence in gap
AC015921.20 CTD-3060P21 HSCHR17_CTG2 WIBR fin joinblack 14787 5 99.817 initial certificate; >0 gap of 50bp or more, not simple sequence
AC097370.10 CTD-2513A7 HSCHR17_CTG2 WIBR fin joingreen 51142 2 99.998  
AC090282.6 CTD-2309O5 HSCHR17_CTG2 WIBR fin joingreen 7578 2 99.881 simple sequence in gap
AC087498.8 RP11-64J4 HSCHR17_CTG2 WIBR fin joingreen 23006 11 99.913 simple sequence in gap
AC025125.15 RP11-147K16 HSCHR17_CTG2 WIBR fin joingreen 13480 0 100  
AC027796.9 RP11-235E17 HSCHR17_CTG2 WIBR fin joinyellow 204 1 100 alignment length < 2000
FJ695206.1 PCR_RP11_AC027796_1 HSCHR17_CTG2 unk joinred 0 0 0 not analyzed; no overlap present
AC132942.16 RP11-48B14 HSCHR17_CTG2 WIBR fin joingreen 3162 3 99.684 simple sequence in gap
AC116914.5 CTD-3195I5 HSCHR17_CTG2 WIBR fin joingreen 22266 0 99.987  
AC005940.3 RP11-167N20 HSCHR17_CTG2 WIBR fin joingreen 13842 0 100  
AC067815.6 RP11-459C13 HSCHR17_CTG2 WIBR fin joinblack 63986 30 99.867 initial certificate; >0 gap of 500bp or more, not simple sequence
AC087292.14 RP11-810M2 HSCHR17_CTG2 WIBR fin joingreen 57057 1 99.998  
AC087742.9 RP11-104O19 HSCHR17_CTG2 WIBR fin joingreen 1261 0 100  
AC116910.11 CTD-2573C9 HSCHR17_CTG2 WIBR fin joingreen 5082 3 99.862 simple sequence in gap
AC127521.11 RP13-580F15 HSCHR17_CTG2 WIBR fin joingreen 18335 7 99.842 simple sequence in gap
AC118754.6 RP11-141J13 HSCHR17_CTG2 WIBR fin joingreen 74600 2 99.999  
AC091153.10 RP11-314A20 HSCHR17_CTG2 WIBR fin joingreen 45799 0 100  
AC233723.2 RP11-81A22 HSCHR17_CTG2 WUGSC fin joingreen 5329 4 99.906 simple sequence in gap
AC004771.1 RP5-1050D4 HSCHR17_CTG2 WIBR fin joingreen 12479 7 99.912 simple sequence in gap
AC012146.25 RP11-46I8 HSCHR17_CTG2 WIBR fin joingreen 29197 0 99.997  
AC087500.16 RP11-333E1 HSCHR17_CTG2 WIBR fin joingreen 55009 32 99.924 simple sequence in gap
AC015727.7 RP11-420A6 HSCHR17_CTG2 WIBR fin joinyellow 12674 2 99.976 >0 gap of 25bp or more, not simple sequence
AC004148.1 CTC-524C5 HSCHR17_CTG2 WIBR fin joingreen 3663 1 100  
AC055839.9 RP11-807C20 HSCHR17_CTG2 WIBR fin joingreen 37378 17 99.874 simple sequence in gap
AC083757.6 RP11-373N8 HSCHR17_CTG2 WIBR fin joingreen 25151 0 99.988  
AC135726.6 CTC-830I3 HSCHR17_CTG2 WIBR fin joingreen 2065 0 99.952  
AC006236.2 CTB-162E12 HSCHR17_CTG2 WIBR fin joingreen 5154 4 99.748 simple sequence in gap
AC007846.12 RP11-803F22 HSCHR17_CTG2 WIBR fin joingreen 34977 3 99.986 simple sequence in gap
AC001231.3 CTB-44J6 HSCHR17_CTG2 WIBR fin joingreen 6690 6 99.821 simple sequence in gap
AC104770.10 RP11-960B9 HSCHR17_CTG2 WIBR fin joingreen 33023 18 99.894 simple sequence in gap
AC005668.1 RP11-243K12 HSCHR17_CTG2 WIBR fin joingreen 18481 0 99.995  
AC055872.23 RP11-636N17 HSCHR17_CTG2 WIBR fin joingreen 31085 5 99.884 simple sequence in gap
AC015916.13 CTD-2339F15 HSCHR17_CTG2 WIBR fin joingreen 4718 2 99.936 simple sequence in gap
AC004706.1 CTC-281F24 HSCHR17_CTG2 WIBR fin joingreen 2010 0 100  
AC034305.6 RP11-609D21 HSCHR17_CTG2 WIBR fin joingreen 42569 0 100  
AC027763.9 RP11-530N7 HSCHR17_CTG2 WIBR fin joinblack 103619 22 99.939 initial certificate; >0 gap of 50bp or more, not simple sequence
AC040977.10 RP11-589P10 HSCHR17_CTG2 WIBR fin joingreen 4043 0 99.926  
AC120057.9 CTD-2545G14 HSCHR17_CTG2 WIBR fin joinyellow 47032 16 99.930 half-dovetail of >0bp and <=50bp
AC003688.1 RP1-4G17 HSCHR17_CTG2 WIBR fin joinyellow 17187 6 99.843 half-dovetail of >0bp and <=50bp
AC026954.14 RP11-542C16 HSCHR17_CTG2 WIBR fin joingreen 29555 21 99.898 simple sequence in gap
AC113189.11 RP11-104H15 HSCHR17_CTG2 WIBR fin joingreen 163 0 100  
AC016876.10 RP11-186B7 HSCHR17_CTG2 WIBR fin joinyellow 202 1 100 alignment length < 2000
FJ695203.1 PCR_RP11_AC016876_1 HSCHR17_CTG2 unk joinyellow 202 0 100 alignment length < 2000
AC007421.13 RP5-1030O14 HSCHR17_CTG2 WIBR fin joingreen 38046 24 99.756 simple sequence in gap
AC087388.9 RP11-199F11 HSCHR17_CTG2 WIBR fin joingreen 35436 15 99.870 simple sequence in gap
AC025335.25 RP11-404G1 HSCHR17_CTG2 WIBR fin joingreen 1561 0 100  
AC104581.22 RP11-1099M24 HSCHR17_CTG2 WIBR fin joingreen 19357 0 100  
AC129492.6 RP11-599B13 HSCHR17_CTG2 WIBR fin joingreen 4919 0 100  
AC135178.13 RP11-849F2 HSCHR17_CTG2 WIBR fin joingreen 28873 6 99.965 simple sequence in gap
AC026130.15 RP11-801J18 HSCHR17_CTG2 WIBR fin joingreen 112591 1 99.996 simple sequence in gap
AC025518.8 RP11-713H12 HSCHR17_CTG2 WIBR fin joingreen 37642 24 99.756 simple sequence in gap
AC011061.13 RP11-12H18 HSCHR17_CTG2 WIBR fin joingreen 42452 19 99.828 simple sequence in gap
AC009451.21 CTD-2286H12 HSCHR17_CTG2 WIBR fin joingreen 17313 3 99.988  
AC003695.1 RP5-859O20 HSCHR17_CTG2 WIBR fin joinblack 76570 18 99.922 initial certificate; >0 gap of 50bp or more, not simple sequence
AC002091.2 CTB-41I6 HSCHR17_CTG2 WIBR fin joinyellow 46631 18 99.927 >0 gap of 25bp or more, not simple sequence
AC090610.6 RP11-493I24 HSCHR17_CTG2 WIBR fin joingreen 6817 0 100  
AC005695.1 RP11-85B7 HSCHR17_CTG2 WIBR fin joingreen 13888 5 99.899 simple sequence in gap
AC009335.10 RP11-20O2 HSCHR17_CTG2 WIBR fin joingreen 26135 3 99.996 simple sequence in gap
AC087501.16 RP11-565F19 HSCHR17_CTG2 WIBR fin joingreen 162721 88 99.865 simple sequence in gap
AC118755.7 RP11-55L4 HSCHR17_CTG2 WIBR fin joingreen 17732 0 100  
AC027045.21 RP11-477N12 HSCHR17_CTG2 WIBR fin joingreen 2497 0 100  
AC026591.15 RP11-655D3 HSCHR17_CTG2 WIBR fin joingreen 85266 2 100 simple sequence in gap
AC005747.1 RP11-150K15 HSCHR17_CTG2 WIBR fin joingreen 43739 4 99.993 simple sequence in gap
AC107938.6 CTD-3075O8 HSCHR17_CTG2 WIBR fin joingreen 16957 2 99.970 simple sequence in gap
AC000003.1 CTB-104H12 HSCHR17_CTG2 WIBR fin joingreen 22857 13 99.869 simple sequence in gap
AC083783.8 RP11-462C21 HSCHR17_CTG2 WIBR fin joingreen 85798 0 100  
AC005291.1 RP11-401O9 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.950  
AC005323.1 RP11-799N11 HSCHR17_CTG2 WIBR fin joingreen 2000 1 100 simple sequence in gap
AC002347.3 CTC-297N7 HSCHR17_CTG2 WIBR fin joingreen 5021 5 99.821 simple sequence in gap
AC015908.10 RP11-963H4 HSCHR17_CTG2 WIBR fin joingreen 15978 6 99.825 simple sequence in gap
AC005284.1 RP11-795F17 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005548.1 RP11-756K11 HSCHR17_CTG2 WIBR fin joingreen 2000 1 99.800 simple sequence in gap
AC005725.1 RP11-680C21 HSCHR17_CTG2 WIBR fin joingreen 59312 10 99.936 simple sequence in gap
AC055825.8 RP11-22L4 HSCHR17_CTG2 WIBR fin joingreen 14813 0 100  
AC007510.6 RP11-678P16 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.950  
AC005701.1 RP11-628E12 HSCHR17_CTG2 WIBR fin joingreen 1227 0 100  
AC005209.1 RP11-628O18 HSCHR17_CTG2 WIBR fin joingreen 5786 0 100  
AC005410.3 RP11-1096G20 HSCHR17_CTG2 WIBR fin joingreen 1771 0 100  
AC005244.1 RP11-471L13 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005245.1 RP11-642C21 HSCHR17_CTG2 WIBR fin joingreen 15442 1 99.896 simple sequence in gap
AC084167.6 CTD-2334L1 HSCHR17_CTG2 WIBR fin joingreen 29543 3 99.949 simple sequence in gap
AC006079.1 RP11-855D21 HSCHR17_CTG2 WIBR fin joingreen 8418 0 99.988  
AC068442.7 RP11-187D20 HSCHR17_CTG2 WIBR fin joingreen 33136 2 99.988 simple sequence in gap
AC005358.1 RP11-746E8 HSCHR17_CTG2 WIBR fin joingreen 1999 2 99.900  
AC005274.1 RP11-1090M7 HSCHR17_CTG2 WIBR fin joingreen 1992 1 99.649 simple sequence in gap
AC005277.1 RP11-597M12 HSCHR17_CTG2 WIBR fin joingreen 2008 0 100  
AC005303.1 RP11-488L1 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.900  
AC003664.1 CTB-54K19 HSCHR17_CTG2 WIBR fin joingreen 2000 1 99.950 simple sequence in gap
AC005375.4 RP11-388F14 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005411.1 RP11-721K1 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC015842.9 RP11-350B3 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.750  
AC005497.9 RP11-952N18 HSCHR17_CTG2 WIBR fin joingreen 1998 0 100  
AC005304.1 RP11-131K5 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.800  
AC005389.1 RP11-601N13 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005224.1 RP11-214O1 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.650  
AC022816.15 RP11-626C5 HSCHR17_CTG2 WIBR fin joinyellow 1999 6 99.250 identity < 99.6%; alignment length < 2000
AC006578.5 RP1-27J12 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.800  
AC005900.1 RP11-998F8 HSCHR17_CTG2 WIBR fin joingreen 2000 0 99.950  
AC013248.5 RP11-64B12 HSCHR17_CTG2 WIBR fin joingreen 2000 1 99.800 simple sequence in gap
AC005863.1 RP11-786O4 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005773.1 RP11-534P15 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005772.1 RP11-924A14 HSCHR17_CTG2 WIBR fin joingreen 1998 1 99.800 simple sequence in gap
AC005703.2 RP11-849N15 HSCHR17_CTG2 WIBR fin joingreen 2002 0 100  
AC005517.7 RP11-726O12 HSCHR17_CTG2 WIBR fin joingreen 7023 0 100  
AC005838.2 RP11-385D13 HSCHR17_CTG2 WIBR fin joingreen 3110 1 99.807  
AC005324.1 RP11-640I15 HSCHR17_CTG2 WIBR fin joingreen 5591 0 100  
AC015922.17 CTD-3157E16 HSCHR17_CTG2 WIBR fin joinblack 38000 21 99.832 initial certificate; >0 gap of 500bp or more
AC006251.3 RP11-692E18 HSCHR17_CTG2 WIBR fin joingreen 2001 0 100  
AC002553.2 CTC-529I10 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC005971.5 RP11-651L9 HSCHR17_CTG2 WIBR fin joingreen 80431 41 99.935 simple sequence in gap
AC093484.2 RP11-138I1 HSCHR17_CTG2 WIBR fin joingreen 4721 0 100  
AC127540.10 RP1-77H15 HSCHR17_CTG2 WIBR fin joingreen 140585 10 99.977 simple sequence in gap
AC005822.1 RP11-209J20 HSCHR17_CTG2 WIBR fin joingreen 2000 0 100  
AC092714.2 RP11-73L16 HSCHR17_CTG2 WIBR fin joinyellow 1397 0 100 half-dovetail of >0bp and <=50bp; alignment length < 2000
AC098850.2 RP11-92B11 HSCHR17_CTG2 WIBR fin joinblack 120029 33 99.926 initial certificate; >0 gap of 50bp or more, not simple sequence
AC022596.9 RP11-219A15 HSCHR17_CTG2 WIBR fin joingreen 29098 8 99.674 simple sequence in gap
AL353996.3 RP1-48J14 HSCHR17_CTG2 MPIMG fin joingreen 6824 2 99.868 simple sequence in gap
AC104024.8 RP11-416I2 HSCHR17_CTG2 WIBR fin joingreen 33386 4 99.997 simple sequence in gap
AC079111.7 RP11-367G9 HSCHR17_CTG2 WIBR fin joingreen 34920 1 99.994  
AC055811.20 RP11-45M22 HSCHR17_CTG2 WIBR fin joingreen 13689 0 99.993  
AC006071.1 CTB-124H2 HSCHR17_CTG2 WIBR fin joingreen 3078 4 99.902 simple sequence in gap
AC073621.21 CTD-3073J20 HSCHR17_CTG2 WIBR fin joingreen 5246 1 99.981  
AC020558.4 RP11-524F11 HSCHR17_CTG2 WUGSC fin joingreen 20733 0 100  
AC078903.11 RP11-1084K4 HSCHR17_CTG2 WIBR fin joingreen 9796 0 99.990  
AC122129.9 RP1-253P7 HSCHR17_CTG2 WIBR fin joingreen 2992 1 99.900  
AC087163.10 RP11-384M20 HSCHR17_CTG2 WIBR fin joingreen 13412 4 99.925 simple sequence in gap
AC087164.9 RP11-258F1 HSCHR17_CTG2 WIBR fin joingreen 95149 23 99.910 simple sequence in gap
AC109515.6 CTD-2503K16 HSCHR17_CTG2 WIBR fin joingreen 13864 1 99.820 simple sequence in gap
AC127537.8 RP1-178F10 HSCHR17_CTG2 WIBR fin joingreen 25851 0 100  
AL353997.3 RP1-37N7 HSCHR17_CTG2 MPIMG fin joingreen 43835 1 99.986 simple sequence in gap
AC107983.3 CTD-2303H24 HSCHR17_CTG2 WIBR fin joingreen 45619 34 99.619 simple sequence in gap
AC026271.6 RP11-815I9 HSCHR17_CTG2 WIBR fin joingreen 15849 1 99.981 simple sequence in gap
AC107982.6 CTD-2145A24 HSCHR17_CTG2 WIBR fin joingreen 37691 7 99.944 simple sequence in gap
AC090286.16 RP11-28B23 HSCHR17_CTG2 WIBR fin joinyellow 98005 24 99.957 >0 gap of 25bp or more, not simple sequence
AC003957.1 CTC-457L16 HSCHR17_CTG2 WIBR fin joingreen 13668 2 99.971 simple sequence in gap
AC007952.16 RP11-160E2 HSCHR17_CTG2 WIBR fin joingreen 63649 8 99.991 simple sequence in gap
AC106017.11 RP11-744A16 HSCHR17_CTG2 WIBR fin joinblack 52318 22 99.874 initial certificate; >0 gap of 50bp or more, not simple sequence
AC124066.6 RP11-135L13 HSCHR17_CTG2 WIBR fin joingreen 29042 5 99.928 simple sequence in gap
AC004448.4 CTB-187M2 HSCHR17_CTG2 WIBR fin joingreen 46042 13 99.898 simple sequence in gap
AC025627.13 RP11-1113L8 HSCHR17_CTG2 WIBR fin joingreen 5796 2 99.896 simple sequence in gap
AC115989.6 CTD-2104P17 HSCHR17_CTG2 WIBR fin joingreen 11558 3 99.957 simple sequence in gap
AC005722.1 RP11-311F12 HSCHR17_CTG2 WIBR fin joingreen 64966 28 99.882 simple sequence in gap
AC015726.8 RP11-78O7 HSCHR17_CTG2 WIBR fin joingreen 5402 0 100  
AC005730.1 RP11-209D14 HSCHR17_CTG2 WIBR fin joingreen 24432 3 99.996 simple sequence in gap
AC007963.7 CTD-2010G8 HSCHR17_CTG2 WIBR fin joinyellow 1025 0 99.902 alignment length < 2000
AC004702.2 RP5-836L9 HSCHR17_CTG2 WIBR fin joingreen 22164 1 99.995 simple sequence in gap
AC008088.8 RP11-121A13 HSCHR17_CTG2 WIBR fin joingreen 2495 1 99.800 simple sequence in gap
AC015818.32 RP11-434D2 HSCHR17_CTG2 WIBR fin joingreen 41977 10 99.983 simple sequence in gap
AC087499.12 RP11-218E15 HSCHR17_CTG2 WIBR fin joingreen 130080 1 99.995  
AC126365.5 RP11-283C24 HSCHR17_CTG2 WIBR fin joingreen 42803 16 99.951 simple sequence in gap
AC090774.6 RP11-344E13 HSCHR17_CTG2 WIBR fin joingreen 156842 61 99.874 simple sequence in gap
AC107926.6 RP11-381P6 HSCHR17_CTG2 WIBR fin joingreen 5029 1 99.960 simple sequence in gap
AC087393.7 RP11-746M1 HSCHR17_CTG2 WIBR fin joingreen 40559 1 99.990  
AC087294.18 RP11-64J19 HSCHR17_CTG2 WIBR fin joinyellow 189 1 100 alignment length < 2000
FJ695210.1 PCR_RP11_AC087294_1 HSCHR17_CTG2 unk joinred 0 0 0 not analyzed; no overlap present
AC068418.5 RP11-728E14 HSCHR17_CTG2 WIBR fin joingreen 130578 13 99.922 simple sequence in gap
AC113144.11 RP11-45G12 HSCHR17_CTG2 WIBR fin joingreen 17663 0 100  
AC138710.5 RP11-822E23 HSCHR17_CTG2 WIBR fin joinyellow 2257 4 98.981 identity < 99.6%
AC144838.3 XXFOS-84721F6 HSCHR17_CTG2 WIBR fin
? CH17-53B9 HSCHR17_CTG2  
GAP TYPE-3    
AC233273.2 ABC14-50118000O16 HSCHR17_CTG3 WUGSC fin joingreen 23440 4 99.923 simple sequence in gap
AC138761.4 RP11-1109M24 HSCHR17_CTG3 WIBR fin joingreen 138353 47 99.908 simple sequence in gap
AC087575.11 RP11-305L6 HSCHR17_CTG3 WIBR fin joingreen 57074 12 99.995 simple sequence in gap
AC090894.10 RP11-744K17 HSCHR17_CTG3 WIBR fin joingreen 5467 0 99.982  
AC131055.10 RP11-846F4 HSCHR17_CTG3 WIBR fin joingreen 69436 1 100 simple sequence in gap
AC131274.9 RP11-285M22 HSCHR17_CTG3 WIBR fin
GAP CENTROMERE 3000000  
AC069061.11 RP11-260A9 HSCHR17_CTG3_1 WIBR fin joingreen 78509 1 100  
AC129926.4 RP11-663N22 HSCHR17_CTG3_1 WIBR fin joingreen 15356 1 100  
AC026254.9 RP11-173M1 HSCHR17_CTG3_1 WIBR fin joingreen 76011 24 99.895 simple sequence in gap
AC090615.9 RP11-578C11 HSCHR17_CTG3_1 WIBR fin joingreen 35135 1 100 simple sequence in gap
AC069366.8 RP11-720N19 HSCHR17_CTG3_1 WIBR fin joingreen 45121 8 99.896 simple sequence in gap
AC015688.11 RP11-19P22 HSCHR17_CTG3_1 WIBR fin joingreen 10589 1 100  
AC130289.11 RP1-66C13 HSCHR17_CTG3_1 WIBR fin joingreen 47193 11 99.905 simple sequence in gap
AC005697.1 RP11-138P22 HSCHR17_CTG3_1 WIBR fin joingreen 1982 0 100  
AC090287.9 RP11-218F4 HSCHR17_CTG3_1 WIBR fin joingreen 11682 0 100  
AC100852.2 RP11-125C16 HSCHR17_CTG3_1 WIBR fin joingreen 16008 1 99.981 simple sequence in gap
AC061975.6 CTD-2008P7 HSCHR17_CTG3_1 WIBR fin joingreen 84132 37 99.955 simple sequence in gap
AC002094.1 CTB-96E2 HSCHR17_CTG3_1 WIBR fin joingreen 11864 3 99.958 simple sequence in gap
AC015917.30 CTD-2350C19 HSCHR17_CTG3_1 WIBR fin joingreen 40401 5 99.906 simple sequence in gap
AC005726.1 RP11-192H23 HSCHR17_CTG3_1 WIBR fin joingreen 9962 1 99.970 simple sequence in gap
AC010761.10 ? HSCHR17_CTG3_1 WIBR fin joinyellow 558 1 100 alignment length < 2000
FJ695200.1 PCR_RP11_AC010761_1 HSCHR17_CTG3_1 unk joinred 0 0 0 not analyzed; no overlap present
AC024267.18 RP11-20B24 HSCHR17_CTG3_1 WIBR fin joingreen 15005 0 100  
AC024619.16 RP11-321A17 HSCHR17_CTG3_1 WIBR fin joingreen 5255 0 99.981  
AC005412.8 RP11-22N12 HSCHR17_CTG3_1 WIBR fin joinyellow 98312 48 99.910 >0 gap of 25bp or more, not simple sequence
AC068025.12 RP11-802D6 HSCHR17_CTG3_1 WIBR fin joingreen 10514 0 100  
AC068588.20 RP11-659G19 HSCHR17_CTG3_1 WIBR fin joingreen 15716 8 99.917 simple sequence in gap
AC090698.14 RP11-296K13 HSCHR17_CTG3_1 WIBR fin joinyellow 4932 4 99.817 half-dovetail of >0bp and <=50bp
AC104564.11 RP11-68I3 HSCHR17_CTG3_1 WIBR fin joingreen 36349 16 99.912 simple sequence in gap
AC023389.13 RP11-82O19 HSCHR17_CTG3_1 WIBR fin joingreen 56986 27 99.930 simple sequence in gap
AC087510.7 RP11-104I20 HSCHR17_CTG3_1 WIBR fin joingreen 1545 0 99.935  
AC104982.7 RP11-338L22 HSCHR17_CTG3_1 WIBR fin joingreen 58254 12 99.938 simple sequence in gap
AC104996.4 RP11-1148O4 HSCHR17_CTG3_1 WIBR fin joingreen 5474 0 99.945  
AC104984.14 RP11-354P11 HSCHR17_CTG3_1 WIBR fin joingreen 23702 2 99.992  
AC087644.8 RP11-403E9 HSCHR17_CTG3_1 WIBR fin joingreen 73895 14 99.962 simple sequence in gap
AC090685.8 RP11-252O24 HSCHR17_CTG3_1 WIBR fin joingreen 79451 1 100  
AC006050.2 RP11-268F2 HSCHR17_CTG3_1 WIBR fin joingreen 40175 0 100  
AC011840.7 RP11-218M11 HSCHR17_CTG3_1 WIBR fin joingreen 61156 9 99.897 simple sequence in gap
AC005562.1 RP11-271K11 HSCHR17_CTG3_1 WIBR fin joingreen 7405 0 100  
AC127024.4 CTD-2349P21 HSCHR17_CTG3_1 WIBR fin joingreen 85377 14 99.977 simple sequence in gap
AC130324.21 RP13-753N3 HSCHR17_CTG3_1 WIBR fin joingreen 9088 1 99.967 simple sequence in gap
AC091177.3 CTD-3098J15 HSCHR17_CTG3_1 WIBR fin joingreen 13373 0 99.985  
AC138207.3 RP11-848P1 HSCHR17_CTG3_1 WIBR fin joingreen 41575 0 100  
AC079915.7 RP11-142O6 HSCHR17_CTG3_1 WIBR fin joingreen 82139 29 99.892 simple sequence in gap
AC004222.1 CTC-499I20 HSCHR17_CTG3_1 WIBR fin joingreen 19454 6 99.943 simple sequence in gap
AC139072.3 XXFOS-82658F2 HSCHR17_CTG3_1 WIBR fin joingreen 18919 9 99.847 certificate rejected; simple sequence in gap
AC134669.4 CTD-2370N5 HSCHR17_CTG3_1 WIBR fin joingreen 74987 6 99.999 simple sequence in gap
AC135724.9 CTD-2538H15 HSCHR17_CTG3_1 WIBR fin joingreen 49681 17 99.875 simple sequence in gap
AC003101.2 RP1-41C23 HSCHR17_CTG3_1 WIBR fin joingreen 7278 5 99.931 simple sequence in gap
AC007923.7 RP11-805L22 HSCHR17_CTG3_1 WIBR fin joingreen 30423 6 99.898 simple sequence in gap
AC004253.2 CTC-542B22 HSCHR17_CTG3_1 WIBR fin joingreen 15415 4 99.792 simple sequence in gap
AC129917.6 RP11-279B10 HSCHR17_CTG3_1 WIBR fin joingreen 44417 1 99.995  
AC090616.13 RP11-640N20 HSCHR17_CTG3_1 WIBR fin joingreen 11027 0 99.982  
AC116407.18 CTD-2095E4 HSCHR17_CTG3_1 WIBR fin joingreen 40112 3 99.990 simple sequence in gap
AC026620.18 RP11-443G13 HSCHR17_CTG3_1 WIBR fin joinblack 19521 0 99.949 initial certificate; half-dovetail of >50bp
AC005899.1 RP11-227G15 HSCHR17_CTG3_1 WIBR fin joingreen 52210 2 100  
AC079336.5 RP11-466A19 HSCHR17_CTG3_1 WIBR fin joingreen 29441 1 100 simple sequence in gap
AC025211.8 RP11-220C2 HSCHR17_CTG3_1 WIBR fin joingreen 35021 2 99.994  
AC007982.2 ? HSCHR17_CTG3_1 WIBR fin joingreen 19702 5 99.898 simple sequence in gap
AC084809.17 CTD-2338C18 HSCHR17_CTG3_1 WIBR fin joingreen 25708 8 99.860 simple sequence in gap
AC003687.2 RP1-29G21 HSCHR17_CTG3_1 WIBR fin joingreen 5250 2 99.790 simple sequence in gap
AC008133.7 RP11-40A13 HSCHR17_CTG3_1 WIBR fin joinyellow 80889 15 99.883 >0 gap of 25bp or more, not simple sequence
AC025898.10 RP11-421O15 HSCHR17_CTG3_1 WIBR fin joingreen 37350 8 99.896 simple sequence in gap
AC027233.7 RP11-205P19 HSCHR17_CTG3_1 WIBR fin joingreen 67544 1 99.997  
AC015751.10 RP11-1J8 HSCHR17_CTG3_1 WIBR fin joingreen 3312 0 100  
AC011824.8 RP11-31I22 HSCHR17_CTG3_1 WIBR fin joingreen 17883 4 99.888 simple sequence in gap
AC024614.5 RP11-118G23 HSCHR17_CTG3_1 WIBR fin joingreen 39004 2 99.967 simple sequence in gap
AC078907.7 RP11-160L11 HSCHR17_CTG3_1 WIBR fin joingreen 53874 9 99.846 simple sequence in gap
AC024610.6 RP11-17M24 HSCHR17_CTG3_1 WIBR fin joingreen 122259 14 99.903 simple sequence in gap
AC123769.5 RP11-1086I4 HSCHR17_CTG3_1 WIBR fin joingreen 28234 10 99.848 simple sequence in gap
AC004147.2 CTC-304I17 HSCHR17_CTG3_1 WIBR fin joingreen 2000 0 99.700  
AC005549.1 RP11-215E13 HSCHR17_CTG3_1 WIBR fin joingreen 7434 0 99.906  
AC011193.3 RP11-521P1 HSCHR17_CTG3_1 WIBR fin joingreen 37367 7 99.898 simple sequence in gap
AC012336.9 CTD-2236G12 HSCHR17_CTG3_1 WIBR fin joingreen 2001 0 100  
AC005691.1 RP11-28A22 HSCHR17_CTG3_1 WIBR fin joingreen 21034 1 99.981 simple sequence in gap
AC110605.5 CTD-2317L23 HSCHR17_CTG3_1 WIBR fin joingreen 28990 7 99.845 simple sequence in gap
AC005552.3 RP11-212E8 HSCHR17_CTG3_1 WIBR fin joingreen 21135 3 99.972 simple sequence in gap
AC022903.12 RP11-642M2 HSCHR17_CTG3_1 WIBR fin joingreen 6107 0 99.967  
AC004223.2 RP5-837J1 HSCHR17_CTG3_1 WIBR fin joingreen 57295 9 99.972 simple sequence in gap
AC022916.11 RP11-799D4 HSCHR17_CTG3_1 WIBR fin joingreen 76417 0 99.996  
AC022706.7 RP11-47L3 HSCHR17_CTG3_1 WIBR fin joingreen 66816 17 99.874 simple sequence in gap
AC060766.8 RP11-686D22 HSCHR17_CTG3_1 WIBR fin joingreen 25243 6 99.897 simple sequence in gap
AC015911.8 RP11-1094M14 HSCHR17_CTG3_1 WIBR fin joingreen 5463 1 99.945 simple sequence in gap
AC004134.1 CTC-507E2 HSCHR17_CTG3_1 WIBR fin joingreen 1993 2 99.900 simple sequence in gap
AC006237.1 RP1-161P9 HSCHR17_CTG3_1 WIBR fin joingreen 73784 12 99.959 simple sequence in gap
AC015849.5 ? HSCHR17_CTG3_1 WIBR fin joingreen 48818 1 99.996 simple sequence in gap
AC004675.1 CTB-186H2 HSCHR17_CTG3_1 WIBR fin joingreen 38089 26 99.806 simple sequence in gap
AC069363.10 RP11-104J23 HSCHR17_CTG3_1 WIBR fin joingreen 58388 26 99.705 simple sequence in gap
AC003976.1 CTB-91J4 HSCHR17_CTG3_1 WIBR fin joingreen 25889 10 99.664 simple sequence in gap
AC131056.5 ? HSCHR17_CTG3_1 WIBR fin
GAP TYPE-3    
AC126327.6 RP11-428O23 HSCHR17_CTG4 WIBR fin joingreen 4788 1 99.958 simple sequence in gap
AC003042.1 CTB-75G16 HSCHR17_CTG4 WIBR fin joingreen 13565 2 99.867  
AC015938.17 CTD-3194G12 HSCHR17_CTG4 WIBR fin joingreen 56742 16 99.859 simple sequence in gap
AC025882.7 RP11-445F12 HSCHR17_CTG4 WIBR fin joingreen 40811 0 100  
AC023315.4 RP11-333J10 HSCHR17_CTG4 WIBR fin joinyellow 22416 1 99.991 >0 gap of 25bp or more, not simple sequence
AC003103.2 CTC-268N12 HSCHR17_CTG4 WIBR fin joingreen 16792 3 99.994 simple sequence in gap
AC016482.5 RP11-19G24 HSCHR17_CTG4 WIBR fin joingreen 32035 0 100  
AC068400.10 RP11-378E13 HSCHR17_CTG4 WIBR fin joingreen 93176 38 99.923 simple sequence in gap
AC068447.16 RP11-451O3 HSCHR17_CTG4 WIBR fin joingreen 3147 3 99.778 simple sequence in gap
AC004099.1 CTC-421K24 HSCHR17_CTG4 WIBR fin joingreen 29945 5 99.933 simple sequence in gap
AC091199.6 RP11-697E22 HSCHR17_CTG4 WIBR fin joingreen 10188 2 99.931 simple sequence in gap
AC113211.5 RP11-115K3 HSCHR17_CTG4 WIBR fin joingreen 41583 1 100  
AC183087.2 RP11-1407O15 HSCHR17_CTG4 WIBR fin joingreen 64867 4 100  
AC183084.2 RP11-1331M22 HSCHR17_CTG4 WIBR fin joinblack 125414 16 99.978 initial certificate; >0 gap of 500bp or more, not simple sequence
AC115992.13 CTD-2022O14 HSCHR17_CTG4 WIBR fin joingreen 64494 24 99.907 simple sequence in gap
AC124789.12 RP11-923C2 HSCHR17_CTG4 WIBR fin joingreen 27889 16 99.896 simple sequence in gap
AC115090.8 CTC-861O14 HSCHR17_CTG4 WIBR fin joinyellow 121447 13 99.961 >0 gap of 25bp or more, not simple sequence
AC129916.6 RP11-2L19 HSCHR17_CTG4 WIBR fin joingreen 45764 3 99.987 simple sequence in gap
AC006449.19 CTB-58E17 HSCHR17_CTG4 WIBR fin joingreen 15357 11 99.889 simple sequence in gap
AC110749.12 CTD-2303K11 HSCHR17_CTG4 WIBR fin joingreen 13229 7 99.924 simple sequence in gap
AC006441.13 RP1-56K13 HSCHR17_CTG4 WIBR fin joingreen 6496 1 100 simple sequence in gap
AC091178.7 CTD-2206N4 HSCHR17_CTG4 WIBR fin joingreen 17061 5 99.865 simple sequence in gap
AC004408.2 RP5-906A24 HSCHR17_CTG4 WIBR fin joinyellow 23530 6 99.907 half-dovetail of >0bp and <=50bp
AC015910.10 RP11-690G19 HSCHR17_CTG4 WIBR fin joingreen 10051 12 99.871 simple sequence in gap
AC005288.1 CTB-131K11 HSCHR17_CTG4 WIBR fin joingreen 14530 9 99.897 simple sequence in gap
AC009283.6 RP11-390P24 HSCHR17_CTG4 WIBR fin joingreen 54727 20 99.894 simple sequence in gap
AC110495.8 CTD-3082P18 HSCHR17_CTG4 WIBR fin joingreen 7549 4 99.934 simple sequence in gap
AC087491.5 RP11-62N23 HSCHR17_CTG4 WIBR fin joingreen 71033 14 99.900 simple sequence in gap
AC079199.9 RP11-94L15 HSCHR17_CTG4 WIBR fin joingreen 20122 5 99.980 simple sequence in gap
AC090844.7 RP11-387H17 HSCHR17_CTG4 WIBR fin joingreen 65966 41 99.824 simple sequence in gap
AC102799.9 CTD-2248E4 HSCHR17_CTG4 WIBR fin joingreen 26109 10 99.881 simple sequence in gap
AC068669.21 RP11-749I16 HSCHR17_CTG4 WIBR fin joingreen 1127 0 100  
AC080112.15 CTD-2267D19 HSCHR17_CTG4 WIBR fin joingreen 78733 15 99.968 simple sequence in gap
AC018629.12 RP11-58O9 HSCHR17_CTG4 WIBR fin joinblack 5445 4 99.926 initial certificate; >0 gap of 500bp or more, not simple sequence
AC004585.2 RP5-1028K7 HSCHR17_CTG4 WIBR fin joingreen 46899 3 99.979 simple sequence in gap
AC073508.7 RP11-458J1 HSCHR17_CTG4 WIBR fin joingreen 11254 5 99.929 simple sequence in gap
AC090283.7 RP11-605F20 HSCHR17_CTG4 WIBR fin joingreen 23782 11 99.878 simple sequence in gap
AC004231.2 RP5-1110E20 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC007455.7 RP11-27E23 HSCHR17_CTG4 WIBR fin joingreen 37406 1 99.984 simple sequence in gap
AC100808.10 CTD-2534H9 HSCHR17_CTG4 WIBR fin joingreen 16438 8 99.891 simple sequence in gap
AC006070.1 RP11-206C20 HSCHR17_CTG4 WIBR fin joingreen 2000 1 100 simple sequence in gap
AC003958.3 RP1-18F17 HSCHR17_CTG4 WIBR fin joinyellow 1121 1 99.554 identity < 99.6%; alignment length < 2000
AC019349.28 RP11-156A24 HSCHR17_CTG4 WIBR fin joinyellow 93155 27 99.882 half-dovetail of >0bp and <=50bp
AC130686.15 RP13-415G19 HSCHR17_CTG4 WIBR fin joingreen 8319 7 99.700 simple sequence in gap
AC109319.17 RP11-899O23 HSCHR17_CTG4 WIBR fin joingreen 21971 0 100  
AC091172.11 RP11-156E6 HSCHR17_CTG4 WIBR fin joinblack 125798 4 99.996 initial certificate; >0 gap of 500bp or more
AC125257.4 RP11-229E13 HSCHR17_CTG4 WIBR fin joingreen 16802 6 99.946 simple sequence in gap
AC105024.8 CTD-2132N18 HSCHR17_CTG4 WIBR fin joingreen 88183 17 99.946 simple sequence in gap
AC003104.1 CTB-48C15 HSCHR17_CTG4 WIBR fin joingreen 10056 2 100 simple sequence in gap
AC099811.7 RP11-358B23 HSCHR17_CTG4 WIBR fin joingreen 3050 0 100  
AC087691.9 RP11-9B11 HSCHR17_CTG4 WIBR fin joinblack 36679 26 99.891 initial certificate; >0 gap of 50bp or more, not simple sequence
AC107993.9 RP11-194N12 HSCHR17_CTG4 WIBR fin joingreen 2325 0 99.914  
AC067852.23 RP11-400F19 HSCHR17_CTG4 WIBR fin joingreen 15790 8 99.962 simple sequence in gap
AC100793.8 CTD-3193K9 HSCHR17_CTG4 WIBR fin joingreen 62304 4 99.990 simple sequence in gap
AC016889.28 RP11-506G7 HSCHR17_CTG4 WIBR fin joingreen 106347 24 99.950 simple sequence in gap
AC055866.19 RP11-376M2 HSCHR17_CTG4 WIBR fin joinblack 10908 4 99.890 initial certificate; >0 gap of 500bp or more
AC135721.4 CTD-3199J23 HSCHR17_CTG4 WIBR fin joingreen 73826 22 99.928 simple sequence in gap
AC060780.18 RP11-242D8 HSCHR17_CTG4 WIBR fin joingreen 2000 1 100 simple sequence in gap
AC109326.11 CTD-3014M21 HSCHR17_CTG4 WIBR fin joingreen 36641 1 99.997 simple sequence in gap
AC087650.12 RP11-100E5 HSCHR17_CTG4 WIBR fin joingreen 5081 0 100  
AC068675.17 RP11-392O1 HSCHR17_CTG4 WIBR fin joingreen 48370 19 99.932 simple sequence in gap
AC004149.1 CTC-501O10 HSCHR17_CTG4 WIBR fin joingreen 2488 1 100  
AC055813.9 RP11-209M4 HSCHR17_CTG4 WIBR fin joingreen 23169 11 99.862 simple sequence in gap
AC003098.2 RP5-905N1 HSCHR17_CTG4 WIBR fin joingreen 2000 1 100 simple sequence in gap
AC015937.7 CTD-2542F12 HSCHR17_CTG4 WIBR fin joingreen 2002 0 100  
AC007993.15 RP11-527L4 HSCHR17_CTG4 WIBR fin joingreen 12233 1 100  
AC023855.15 RP11-546M21 HSCHR17_CTG4 WIBR fin joingreen 5674 5 99.877 simple sequence in gap
AC004596.2 CTB-175E5 HSCHR17_CTG4 WIBR fin joingreen 1706 1 100 simple sequence in gap
AC003102.1 RP5-882C2 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC003043.2 RP5-1067M6 HSCHR17_CTG4 WIBR fin joingreen 13322 2 99.948 simple sequence in gap
AC007722.9 RP4-803M21 HSCHR17_CTG4 WIBR fin joingreen 5135 2 100 simple sequence in gap
AC103703.5 RP11-764D10 HSCHR17_CTG4 WIBR fin joingreen 41185 0 100  
AC091152.18 RP11-1072C15 HSCHR17_CTG4 WIBR fin joingreen 14352 6 99.916 simple sequence in gap
AC005180.3 CTC-296K1 HSCHR17_CTG4 WIBR fin joingreen 17273 13 99.902 simple sequence in gap
AC015936.14 CTD-2534I21 HSCHR17_CTG4 WIBR fin joingreen 22257 1 100 simple sequence in gap
AC116493.10 CTD-3147F3 HSCHR17_CTG4 WIBR fin joingreen 6235 1 99.920 simple sequence in gap
AC002117.2 CTB-113F3 HSCHR17_CTG4 WIBR fin joingreen 3698 1 99.919  
AC142472.2 XXFOS-8119G3 HSCHR17_CTG4 WIBR fin joingreen 12046 2 99.992 simple sequence in gap
AC138150.4 RP13-890H12 HSCHR17_CTG4 WIBR fin joingreen 11264 5 99.902 simple sequence in gap
AC008105.32 CTD-2020K17 HSCHR17_CTG4 WIBR fin joingreen 3625 0 100  
AC003963.1 RP5-1169K15 HSCHR17_CTG4 WIBR fin joingreen 1999 1 99.950 simple sequence in gap
AC003070.2 CTB-39G8 HSCHR17_CTG4 WIBR fin joingreen 48561 12 99.922 simple sequence in gap
AC091132.16 RP11-798G7 HSCHR17_CTG4 WIBR fin joingreen 18618 1 100  
AC126544.5 RP11-707O23 HSCHR17_CTG4 WIBR fin joingreen 134062 5 99.998 simple sequence in gap
AC217774.1 RP11-293E1 HSCHR17_CTG4 WIBR fin joingreen 34242 0 100  
AC217771.1 RP11-105N13 HSCHR17_CTG4 WIBR fin joingreen 24509 0 100  
CR936218.6 RP11-669E14 HSCHR17_CTG4 fin joingreen 36990 0 100  
AC217773.1 RP11-197O15 HSCHR17_CTG4 WIBR fin joingreen 97751 0 100  
AC005829.1 RP11-259G18 HSCHR17_CTG4 WIBR fin joingreen 21172 0 100  
AC217777.1 RP11-978P20 HSCHR17_CTG4 WIBR fin joingreen 30835 0 100  
AC138645.3 RP11-995C19 HSCHR17_CTG4 WIBR fin joingreen 33326 0 100  
AC217780.1 RP11-679A5 HSCHR17_CTG4 WIBR fin joinblack 17797 6 99.944 initial certificate; >0 gap of 50bp or more, not simple sequence
AC019319.9 RP11-220N20 HSCHR17_CTG4 WIBR fin joingreen 29455 1 99.997 simple sequence in gap
AC015855.13 CTC-480C19 HSCHR17_CTG4 WIBR fin joingreen 9722 7 99.774 simple sequence in gap
AC005670.1 RP11-63A1 HSCHR17_CTG4 WIBR fin joingreen 4501 0 100  
AC068152.11 RP11-156P1 HSCHR17_CTG4 WIBR fin joingreen 14485 7 99.896 simple sequence in gap
AC002558.2 RP5-867C24 HSCHR17_CTG4 WIBR fin joingreen 6779 2 99.941 simple sequence in gap
AC087649.6 RP11-46I22 HSCHR17_CTG4 WIBR fin joingreen 1300 1 100  
AC068234.8 RP11-290H9 HSCHR17_CTG4 WIBR fin joingreen 64540 6 99.991 simple sequence in gap
AC040934.15 CTD-2026D20 HSCHR17_CTG4 WIBR fin joingreen 5099 1 99.980 simple sequence in gap
AC136360.6 RP11-81C1 HSCHR17_CTG4 WIBR fin joingreen 2736 0 100  
AC025682.6 RP11-580I16 HSCHR17_CTG4 WIBR fin joingreen 47607 0 99.996  
AC015674.12 RP11-138C9 HSCHR17_CTG4 WIBR fin joingreen 86705 9 99.989 simple sequence in gap
AC003665.1 CTC-211P7 HSCHR17_CTG4 WIBR fin joingreen 2083 0 100  
AC018521.8 RP11-6N17 HSCHR17_CTG4 WIBR fin joingreen 41317 13 99.826 simple sequence in gap
AC004477.2 RP5-890E16 HSCHR17_CTG4 WIBR fin joinyellow 1824 0 99.342 half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000
AC006468.10 RP1-159F22 HSCHR17_CTG4 WIBR fin joingreen 25833 10 99.942 simple sequence in gap
AC027152.11 RP11-456D7 HSCHR17_CTG4 WIBR fin joingreen 58896 19 99.929 simple sequence in gap
AC090627.4 CTD-2365J3 HSCHR17_CTG4 WIBR fin joingreen 28779 2 99.990 simple sequence in gap
AC036222.23 RP11-433M22 HSCHR17_CTG4 WIBR fin joingreen 10108 0 100  
AC103702.3 RP11-357H14 HSCHR17_CTG4 WIBR fin joingreen 20207 12 99.921 simple sequence in gap
AC091179.5 CTD-2377D24 HSCHR17_CTG4 WIBR fin joingreen 49900 13 99.936 simple sequence in gap
AC068531.9 RP11-463M16 HSCHR17_CTG4 WIBR fin joingreen 15174 0 100  
AC091133.11 RP11-501C14 HSCHR17_CTG4 WIBR fin joingreen 26575 5 99.989 simple sequence in gap
AC105030.11 CTD-2244F11 HSCHR17_CTG4 WIBR fin joingreen 11687 3 99.966 simple sequence in gap
AC069454.22 RP11-708H21 HSCHR17_CTG4 WIBR fin joingreen 7797 1 99.897 simple sequence in gap
AC004797.1 RP1-62O9 HSCHR17_CTG4 WIBR fin joingreen 28394 13 99.894 simple sequence in gap
AC091180.20 RP11-1079K10 HSCHR17_CTG4 WIBR fin joingreen 114304 3 99.998 simple sequence in gap
AC015656.9 RP11-81K2 HSCHR17_CTG4 WIBR fin joingreen 24397 3 99.930 simple sequence in gap
AC006487.9 RP5-1029K10 HSCHR17_CTG4 WIBR fin joingreen 18800 7 99.984 simple sequence in gap
AC015795.20 RP11-613C6 HSCHR17_CTG4 WIBR fin joingreen 46728 2 99.994 simple sequence in gap
AC027801.10 RP11-304F15 HSCHR17_CTG4 WIBR fin joingreen 28162 10 99.847 simple sequence in gap
AC009720.19 RP11-1094H24 HSCHR17_CTG4 WIBR fin joingreen 17996 0 99.928  
AC002401.2 RP5-875H18 HSCHR17_CTG4 WIBR fin joingreen 3732 0 99.920  
AC015909.14 RP11-893F2 HSCHR17_CTG4 WIBR fin joinblack 51431 15 99.909 initial certificate; >0 gap of 50bp or more, not simple sequence
AC004707.2 RP1-117B12 HSCHR17_CTG4 WIBR fin joingreen 7436 0 99.960  
AC021491.16 RP11-94C24 HSCHR17_CTG4 WIBR fin joingreen 76141 11 99.959 simple sequence in gap
AC004590.1 CTB-22K21 HSCHR17_CTG4 WIBR fin joingreen 2000 0 99.900  
AC005921.3 RP11-294J22 HSCHR17_CTG4 WIBR fin joingreen 11828 4 99.789 simple sequence in gap
AC091062.5 RP11-506D12 HSCHR17_CTG4 WIBR fin joingreen 986 0 100  
AC005920.1 RP11-700H6 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005839.1 RP11-481C4 HSCHR17_CTG4 WIBR fin joingreen 1997 1 99.900 simple sequence in gap
AC006141.2 RP11-421E14 HSCHR17_CTG4 WIBR fin joingreen 13177 9 99.901 simple sequence in gap
AC005823.1 RP11-1018N14 HSCHR17_CTG4 WIBR fin joingreen 2010 0 100  
AC005883.14 RP11-958E11 HSCHR17_CTG4 WIBR fin joingreen 2004 1 100 simple sequence in gap
AC002090.1 CTB-43I4 HSCHR17_CTG4 WIBR fin joingreen 1999 0 100  
AC016473.2 RP11-99J11 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC004108.1 CTC-342E3 HSCHR17_CTG4 WIBR fin joingreen 1997 2 99.850 simple sequence in gap
AC006083.1 RP11-1053B8 HSCHR17_CTG4 WIBR fin joingreen 38475 13 99.813 simple sequence in gap
AC092713.2 CTC-780D20 HSCHR17_CTG4 WIBR fin joingreen 85547 17 99.937 simple sequence in gap
AC026955.10 RP11-585D22 HSCHR17_CTG4 WIBR fin joingreen 63378 0 100  
AC105361.2 RP11-170D6 HSCHR17_CTG4 WIBR fin joinblack 96662 37 99.846 initial certificate; >0 gap of 50bp or more, not simple sequence
AC087714.6 RP11-167A1 HSCHR17_CTG4 WIBR fin joingreen 21863 0 99.986  
AC009222.4 RP11-429O1 HSCHR17_CTG4 WIBR fin joingreen 95772 25 99.855 simple sequence in gap
AC024918.5 RP11-254J21 HSCHR17_CTG4 WIBR fin joingreen 17361 11 99.706 simple sequence in gap
AC087611.11 RP11-95G22 HSCHR17_CTG4 WIBR fin joingreen 66912 7 99.993 simple sequence in gap
AC067889.6 CTD-2009B14 HSCHR17_CTG4 WIBR fin joinyellow 956 0 99.582 certificate rejected; identity < 99.6%; alignment length < 2000
AC102948.2 RP11-635H17 HSCHR17_CTG4 WIBR fin joingreen 7846 0 100  
AC090166.5 RP11-750P21 HSCHR17_CTG4 WIBR fin joingreen 27507 10 99.938 simple sequence in gap
AC091154.3 RP11-750B16 HSCHR17_CTG4 WIBR fin joingreen 41157 13 99.871 simple sequence in gap
AC004606.1 RP5-1043H15 HSCHR17_CTG4 WIBR fin joingreen 31547 13 99.870 simple sequence in gap
AC087496.8 RP11-213B3 HSCHR17_CTG4 WIBR fin joingreen 24149 6 99.868 simple sequence in gap
AC005341.13 RP11-146P2 HSCHR17_CTG4 WIBR fin joingreen 9199 0 99.956  
AC090079.6 CTD-2535P7 HSCHR17_CTG4 WIBR fin joingreen 37411 6 99.933 simple sequence in gap
AC034268.4 RP11-312B18 HSCHR17_CTG4 WIBR fin joingreen 6903 0 100  
AC019315.9 RP11-153A6 HSCHR17_CTG4 WIBR fin joingreen 23160 1 100  
AC023934.6 RP11-618P13 HSCHR17_CTG4 WIBR fin joingreen 110975 0 99.999  
AC021010.8 RP11-69D2 HSCHR17_CTG4 WIBR fin joingreen 6807 0 99.971  
AC000389.1 CTC-276O15 HSCHR17_CTG4 WIBR fin joingreen 2501 0 100  
AC011848.11 RP11-354C22 HSCHR17_CTG4 WIBR fin joingreen 36134 1 100 simple sequence in gap
AC091113.7 RP11-410N7 HSCHR17_CTG4 WIBR fin joingreen 46210 0 100  
AC010767.7 RP11-188K10 HSCHR17_CTG4 WIBR fin joingreen 83972 0 100  
AC015943.7 RP11-581B19 HSCHR17_CTG4 WIBR fin joingreen 3046 1 99.901  
AC005951.1 RP11-372K20 HSCHR17_CTG4 WIBR fin joingreen 70524 20 99.851 simple sequence in gap
AC090824.6 CTD-2532B14 HSCHR17_CTG4 WIBR fin joingreen 8192 0 99.988  
AC007485.10 RP11-257O5 HSCHR17_CTG4 WIBR fin joingreen 8442 3 99.728 simple sequence in gap
AC005177.1 CTC-462L7 HSCHR17_CTG4 WIBR fin joingreen 20829 7 99.885 simple sequence in gap
AC007638.8 RP11-515O17 HSCHR17_CTG4 WIBR fin joingreen 32872 10 99.933 simple sequence in gap
AC006269.13 RP11-515E23 HSCHR17_CTG4 WIBR fin joingreen 26752 7 99.839 simple sequence in gap
AC105021.6 CTD-2033D24 HSCHR17_CTG4 WIBR fin joingreen 46463 2 99.993 simple sequence in gap
AC009837.13 RP11-550K23 HSCHR17_CTG4 WIBR fin joingreen 106702 24 99.925 simple sequence in gap
AC091155.5 CTD-2306D4 HSCHR17_CTG4 WIBR fin joingreen 715 0 100  
AC090618.11 RP11-763E3 HSCHR17_CTG4 WIBR fin joingreen 40187 0 99.997  
AC011073.8 RP11-51E18 HSCHR17_CTG4 WIBR fin joingreen 1529 0 100  
AC006925.6 RP11-81I9 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC006600.4 RP11-502F1 HSCHR17_CTG4 WIBR fin joingreen 5909 0 100  
AC015724.9 RP11-45J24 HSCHR17_CTG4 WIBR fin joingreen 95028 2 99.999  
AC005553.1 RP11-112J9 HSCHR17_CTG4 WIBR fin joingreen 61962 16 99.843 simple sequence in gap
AC106858.12 RP11-347L15 HSCHR17_CTG4 WIBR fin joingreen 26157 0 100  
AC015912.16 RP11-670E13 HSCHR17_CTG4 WIBR fin joingreen 48597 13 99.944 simple sequence in gap
AC004584.2 RP5-1107A17 HSCHR17_CTG4 WIBR fin joingreen 9074 5 99.802 simple sequence in gap
AC007114.8 RP11-166P13 HSCHR17_CTG4 WIBR fin joingreen 16968 3 99.847 simple sequence in gap
AC003950.1 CTB-123J14 HSCHR17_CTG4 WIBR fin joingreen 2467 0 100  
AC091181.8 RP11-426D19 HSCHR17_CTG4 WIBR fin joingreen 51217 17 99.885 simple sequence in gap
AC015883.6 RP11-226M10 HSCHR17_CTG4 WIBR fin joingreen 21278 9 99.807 simple sequence in gap
AC007431.8 RP11-118E18 HSCHR17_CTG4 WIBR fin joingreen 18802 0 100  
AC005325.1 RP11-60A24 HSCHR17_CTG4 WIBR fin joingreen 19034 4 99.895 simple sequence in gap
AC015845.8 RP11-343K8 HSCHR17_CTG4 WIBR fin joingreen 22089 6 99.914 simple sequence in gap
AC015813.12 RP11-159D12 HSCHR17_CTG4 WIBR fin joingreen 35091 1 100  
AC005962.1 RP11-506H21 HSCHR17_CTG4 WIBR fin joingreen 1999 0 100  
AC004687.2 RP5-1171I10 HSCHR17_CTG4 WIBR fin joingreen 84329 17 99.948 simple sequence in gap
AC023992.8 RP11-247I5 HSCHR17_CTG4 WIBR fin joingreen 43162 20 99.958 simple sequence in gap
AC005666.1 RP11-112H10 HSCHR17_CTG4 WIBR fin joingreen 15734 6 99.962 simple sequence in gap
AC011195.14 CTD-2200P10 HSCHR17_CTG4 WIBR fin joingreen 57872 7 99.986 simple sequence in gap
AC025521.21 RP11-579A4 HSCHR17_CTG4 WIBR fin joingreen 21652 0 100  
AC100832.2 RP11-579O24 HSCHR17_CTG4 WIBR fin joingreen 30478 8 99.944 simple sequence in gap
AC005207.2 RP5-1081P3 HSCHR17_CTG4 WIBR fin joingreen 23264 2 99.991 simple sequence in gap
AC036154.17 RP11-346N15 HSCHR17_CTG4 WIBR fin joingreen 12079 4 99.917 simple sequence in gap
AC099850.7 CTD-2510F5 HSCHR17_CTG4 WIBR fin joingreen 2507 2 99.960 simple sequence in gap
AC091059.12 RP11-567L7 HSCHR17_CTG4 WIBR fin joingreen 71602 1 99.999 simple sequence in gap
AC005667.1 RP11-329E11 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC004167.2 RP5-1096F1 HSCHR17_CTG4 WIBR fin joingreen 5467 0 99.982  
AC091271.8 RP11-758H9 HSCHR17_CTG4 WIBR fin joingreen 74078 1 100  
AC040904.4 RP11-619I22 HSCHR17_CTG4 WIBR fin joingreen 46703 25 99.910 simple sequence in gap
AC025858.14 RP11-700K10 HSCHR17_CTG4 WIBR fin joingreen 13133 8 99.924 simple sequence in gap
AC004686.2 RP5-1073F15 HSCHR17_CTG4 WIBR fin joingreen 36965 23 99.919 simple sequence in gap
AC005702.1 RP11-178C3 HSCHR17_CTG4 WIBR fin joingreen 15375 0 100  
AC025048.8 CTD-2319I12 HSCHR17_CTG4 WIBR fin joingreen 25154 3 99.992 simple sequence in gap
AC104763.12 RP11-3K24 HSCHR17_CTG4 WIBR fin joingreen 78389 4 99.997 simple sequence in gap
AC003962.1 CTC-217L10 HSCHR17_CTG4 WIBR fin joingreen 2000 1 99.850 simple sequence in gap
AC037475.9 RP11-371B4 HSCHR17_CTG4 WIBR fin joingreen 16156 0 99.969  
AC011921.14 RP11-15E18 HSCHR17_CTG4 WIBR fin joingreen 12345 1 99.992 simple sequence in gap
AC111155.11 CTD-2327L2 HSCHR17_CTG4 WIBR fin joingreen 22160 3 99.995 simple sequence in gap
AC110602.8 RP11-67D12 HSCHR17_CTG4 WIBR fin joinyellow 24309 12 99.667 >0 gap of 25bp or more, not simple sequence
AC079005.9 ? HSCHR17_CTG4 WIBR fin joingreen 41195 0 99.998  
AC015876.10 RP11-106H22 HSCHR17_CTG4 WIBR fin joingreen 2288 0 100  
AC005884.1 RP11-264B14 HSCHR17_CTG4 WIBR fin joingreen 1999 1 99.850 simple sequence in gap
AC005856.1 RP11-136H19 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005746.1 RP11-332H18 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005901.1 RP11-15K2 HSCHR17_CTG4 WIBR fin joinyellow 1999 1 99.800 alignment length < 2000
AC002994.3 RP5-987K16 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005969.4 RP11-215P18 HSCHR17_CTG4 WIBR fin joingreen 42360 0 99.998  
AC060798.10 RP11-615P24 HSCHR17_CTG4 WIBR fin joingreen 49193 5 99.984 simple sequence in gap
AC018628.13 RP11-342K2 HSCHR17_CTG4 WIBR fin joingreen 24073 3 99.983 simple sequence in gap
AC008158.16 RP11-42F20 HSCHR17_CTG4 WIBR fin joinyellow 5597 1 99.964 half-dovetail of >0bp and <=50bp
AC124802.11 RP11-278N14 HSCHR17_CTG4 WIBR fin joingreen 3448 0 100  
AC053481.14 RP11-51L5 HSCHR17_CTG4 WIBR fin joingreen 7169 0 100  
AC008026.7 RP11-464D20 HSCHR17_CTG4 WIBR fin joingreen 55563 25 99.917 simple sequence in gap
AC080038.5 CTD-3035K23 HSCHR17_CTG4 WIBR fin joingreen 84864 30 99.905 simple sequence in gap
AC005821.1 RP11-156L14 HSCHR17_CTG4 WIBR fin joingreen 9742 0 99.979  
AC068512.9 RP11-453A12 HSCHR17_CTG4 WIBR fin joingreen 18913 1 99.995  
AC005972.1 RP11-180P8 HSCHR17_CTG4 WIBR fin joingreen 1999 2 99.900 simple sequence in gap
AC037445.8 RP11-672G22 HSCHR17_CTG4 WIBR fin joingreen 2001 0 99.950  
AC006270.1 RP11-556O9 HSCHR17_CTG4 WIBR fin joingreen 22277 2 99.995 simple sequence in gap
AC015923.8 CTD-2301B9 HSCHR17_CTG4 WIBR fin joingreen 4114 0 100  
AC005828.1 RP11-269G24 HSCHR17_CTG4 WIBR fin joingreen 34486 1 100  
AC113554.9 CTD-2501B8 HSCHR17_CTG4 WIBR fin joingreen 49757 4 99.982 simple sequence in gap
AC046185.14 RP11-51F16 HSCHR17_CTG4 WIBR fin joingreen 47034 1 100  
AC015651.18 ? HSCHR17_CTG4 WIBR fin joingreen 4911 0 100  
AC040958.20 RP11-630H24 HSCHR17_CTG4 WIBR fin joingreen 4598 1 99.761  
AC127029.12 CTC-264K15 HSCHR17_CTG4 WIBR fin joingreen 73510 11 99.970 simple sequence in gap
AC005803.1 RP11-214C8 HSCHR17_CTG4 WIBR fin joingreen 40289 13 99.844 simple sequence in gap
AC025362.12 RP11-89H15 HSCHR17_CTG4 WIBR fin joingreen 41971 1 99.995  
AC016489.18 RP11-329L6 HSCHR17_CTG4 WIBR fin joingreen 3283 0 99.756  
AC234063.4 RP11-281H18 HSCHR17_CTG4 WUGSC fin joingreen 37426 3 99.995  
AC009994.10 RP11-87N3 HSCHR17_CTG4 WIBR fin joingreen 52396 9 99.992 simple sequence in gap
AC132812.9 RP13-104F24 HSCHR17_CTG4 WIBR fin joingreen 20143 6 99.930 simple sequence in gap
AC103810.5 RP11-927P21 HSCHR17_CTG4 WIBR fin joinblack 60675 15 99.965 initial certificate; >0 gap of 50bp or more, not simple sequence
AC037487.12 RP11-583F2 HSCHR17_CTG4 WIBR fin joingreen 71331 1 100 simple sequence in gap
AC015821.9 RP11-160O5 HSCHR17_CTG4 WIBR fin joingreen 46370 27 99.774 simple sequence in gap
AC060771.8 RP11-169I9 HSCHR17_CTG4 WIBR fin joingreen 6371 0 99.984  
AC006080.1 RP11-394K10 HSCHR17_CTG4 WIBR fin joinyellow 98001 45 99.859 >0 gap of 25bp or more, not simple sequence
AC115994.24 CTD-2535L24 HSCHR17_CTG4 WIBR fin joingreen 15755 6 99.873 simple sequence in gap
AC004805.1 GS1-531I17 HSCHR17_CTG4 BCM fin joingreen 66572 17 99.928 simple sequence in gap
AC105028.4 CTD-2171B18 HSCHR17_CTG4 WIBR fin joingreen 25012 12 99.764 simple sequence in gap
AC006440.9 RP11-115N5 HSCHR17_CTG4 WIBR fin joingreen 60113 1 100 simple sequence in gap
AC007716.8 RP11-94O8 HSCHR17_CTG4 WIBR fin joingreen 4950 0 100  
AC087302.7 RP11-761L11 HSCHR17_CTG4 WIBR fin joingreen 60490 11 99.945 simple sequence in gap
AC006120.1 RP11-346K10 HSCHR17_CTG4 WIBR fin joinblack 13420 10 99.858 initial certificate; >0 gap of 500bp or more, not simple sequence
AC009452.21 RP11-4F22 HSCHR17_CTG4 WIBR fin joingreen 21733 6 99.890 simple sequence in gap
AC006263.1 CTB-187K10 HSCHR17_CTG4 WIBR fin joingreen 14282 3 99.909 simple sequence in gap
AC060796.8 CTD-2245L18 HSCHR17_CTG4 WIBR fin joingreen 73021 6 99.977 simple sequence in gap
AC006947.2 RP11-115C3 HSCHR17_CTG4 WIBR fin joingreen 2001 0 100  
AC005918.13 RP11-74H8 HSCHR17_CTG4 WIBR fin joingreen 2003 0 100  
AC005988.1 RP11-299G24 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005544.1 RP11-349A8 HSCHR17_CTG4 WIBR fin joingreen 3742 0 99.893  
AC007448.14 RP11-401F2 HSCHR17_CTG4 WIBR fin joinblack 35843 24 99.877 initial certificate; >0 gap of 50bp or more, not simple sequence
AC110921.9 CTD-2653B5 HSCHR17_CTG4 WIBR fin joingreen 2337 0 99.957  
AC079331.11 RP11-360N9 HSCHR17_CTG4 WIBR fin joingreen 81001 1 99.995  
AC006534.10 RP11-557B23 HSCHR17_CTG4 WIBR fin joingreen 2195 0 100  
AC107377.4 CTD-2314M10 HSCHR17_CTG4 WIBR fin joinyellow 71067 43 99.868 >0 gap of 25bp or more, not simple sequence
AC134407.6 RP11-855A2 HSCHR17_CTG4 WIBR fin joinwhite 12621 7 99.921 alignment exists; one or more unfinished sequences; simple sequence in gap
AC174157.3 ? HSCHR17_CTG4 UWGC top joinwhite 14601 9 99.890 alignment exists; one or more unfinished sequences; simple sequence in gap
AC145343.4 XXFOS-8207C6 HSCHR17_CTG4 WIBR fin joingreen 6109 3 99.820 simple sequence in gap
AC005332.1 RP11-147L13 HSCHR17_CTG4 WIBR fin joingreen 4210 0 99.929  
AC007780.10 CTD-2004N4 HSCHR17_CTG4 WIBR fin joingreen 47202 16 99.873 simple sequence in gap
AC079210.12 RP11-120M18 HSCHR17_CTG4 WIBR fin joingreen 107795 49 99.936 simple sequence in gap
AC005799.1 RP11-62F10 HSCHR17_CTG4 WIBR fin joingreen 5828 0 100  
AC011591.9 RP11-118B18 HSCHR17_CTG4 WIBR fin joinyellow 21908 7 99.895 >0 gap of 25bp or more, not simple sequence
AC015844.12 RP11-283E7 HSCHR17_CTG4 WIBR fin joingreen 5219 0 100  
AC005922.1 RP11-235I10 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005495.2 RP11-293K20 HSCHR17_CTG4 WIBR fin joingreen 22544 3 99.942 simple sequence in gap
AC115085.4 RP11-280F10 HSCHR17_CTG4 WIBR fin joingreen 91073 29 99.921 simple sequence in gap
AC015920.14 CTD-3022L24 HSCHR17_CTG4 WIBR fin joingreen 5760 2 99.879 simple sequence in gap
AC002546.2 RP1-193H18 HSCHR17_CTG4 WIBR fin joinyellow 774 0 100 half-dovetail of >0bp and <=50bp
AC003051.1 RP1-289A8 HSCHR17_CTG4 WIBR fin joinyellow 11210 1 99.982 half-dovetail of >0bp and <=50bp
AC002545.2 RP1-200G19 HSCHR17_CTG4 WIBR fin joinyellow 1999 0 100 certificate rejected; alignment length < 2000
AC004756.1 CTC-508D18 HSCHR17_CTG4 WIBR fin joinyellow 1999 1 100 alignment length < 2000
AC002538.2 RP1-138G16 HSCHR17_CTG4 WIBR fin joingreen 17918 5 99.849 simple sequence in gap
AC002539.2 RP1-195O20 HSCHR17_CTG4 WIBR fin joingreen 68563 33 99.850 simple sequence in gap
AC004562.2 RP1-34M24 HSCHR17_CTG4 WIBR fin joingreen 23522 9 99.838 simple sequence in gap
AC005208.1 RP11-1064E11 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005242.1 RP11-118F13 HSCHR17_CTG4 WIBR fin joingreen 21704 15 99.714 simple sequence in gap
AC011990.7 CTD-2378E21 HSCHR17_CTG4 WIBR fin joingreen 16532 3 99.794 simple sequence in gap
AC005939.1 RP11-467K17 HSCHR17_CTG4 WIBR fin joingreen 32900 3 99.997 simple sequence in gap
AC011090.9 CTD-2005K23 HSCHR17_CTG4 WIBR fin joingreen 10722 2 100 simple sequence in gap
AC005771.1 RP11-1058G23 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC007423.5 RP11-238F2 HSCHR17_CTG4 WIBR fin joingreen 3998 2 100 simple sequence in gap
AC005181.1 RP11-1003J3 HSCHR17_CTG4 WIBR fin joingreen 2000 0 99.850  
AC007642.5 RP11-420O5 HSCHR17_CTG4 WIBR fin joingreen 2002 0 100  
AC005273.1 RP11-879D6 HSCHR17_CTG4 WIBR fin joingreen 2001 0 99.950  
AC005138.1 RP11-261A13 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005279.1 RP11-103M22 HSCHR17_CTG4 WIBR fin joingreen 2047 1 99.902 simple sequence in gap
AC006473.4 RP11-203M16 HSCHR17_CTG4 WIBR fin joingreen 30322 12 99.937 simple sequence in gap
AC118653.6 CTD-2319F6 HSCHR17_CTG4 WIBR fin joingreen 5179 0 99.981  
AC007432.9 ? HSCHR17_CTG4 WIBR fin joingreen 9935 1 99.950 simple sequence in gap
AC005144.1 RP11-465C12 HSCHR17_CTG4 WIBR fin joingreen 1998 1 99.750 simple sequence in gap
AC005152.1 RP5-1037O7 HSCHR17_CTG4 WIBR fin joingreen 2000 0 99.850  
AC007461.8 RP11-84E24 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC005243.1 RP11-1124B17 HSCHR17_CTG4 WIBR fin joingreen 2002 0 99.950  
AC007639.5 RP11-57A1 HSCHR17_CTG4 WIBR fin joingreen 2000 0 100  
AC006948.4 RP11-334M10 HSCHR17_CTG4 WIBR fin joingreen 33292 5 99.922 simple sequence in gap
AC080037.11 CTD-3010D24 HSCHR17_CTG4 WIBR fin joinblack 141616 59 99.818 initial certificate; >0 gap of 50bp or more, not simple sequence
AC011120.11 RP11-171G2 HSCHR17_CTG4 WIBR fin joingreen 17819 9 99.804 simple sequence in gap
AC138336.3 CTC-386K3 HSCHR17_CTG4 WIBR fin joingreen 12864 4 99.813 simple sequence in gap
AC025198.12 RP11-766H1 HSCHR17_CTG4 WIBR fin joingreen 51271 1 100  
AC097641.6 RP11-143K11 HSCHR17_CTG4 WIBR fin joingreen 17022 1 99.982  
AC087301.8 RP11-661C3 HSCHR17_CTG4 WIBR fin joingreen 52139 3 100  
AC124804.10 RP11-449L23 HSCHR17_CTG4 WIBR fin joingreen 35061 4 99.963 simple sequence in gap
AC032019.7 RP11-277J6 HSCHR17_CTG4 WIBR fin joingreen 10940 0 99.909  
AC125421.9 CTD-2532D12 HSCHR17_CTG4 WIBR fin joingreen 31400 2 99.994 simple sequence in gap
AC137735.5 CTD-2582D11 HSCHR17_CTG4 WIBR fin joingreen 22589 8 99.956 simple sequence in gap
AC102947.13 CTD-2179N1 HSCHR17_CTG4 WIBR fin joingreen 13261 5 99.887 simple sequence in gap
AC137898.6 RP11-101O21 HSCHR17_CTG4 WIBR fin joingreen 40959 2 99.988 simple sequence in gap
AC100786.2 CTD-2514K5 HSCHR17_CTG4 WIBR fin joinyellow 90595 39 99.869 >0 gap of 25bp or more, not simple sequence
AC103809.2 RP11-647F2 HSCHR17_CTG4 WIBR fin joingreen 99165 1 99.997  
AC055863.16 RP11-478P5 HSCHR17_CTG4 WIBR fin joingreen 19097 13 99.848 simple sequence in gap
AC079325.10 RP11-194J3 HSCHR17_CTG4 WIBR fin joingreen 5581 0 99.982  
AC064805.13 CTD-2006K23 HSCHR17_CTG4 WIBR fin joinblack 48894 23 99.863 initial certificate; >0 gap of 50bp or more, not simple sequence
AC016888.23 RP11-452I5 HSCHR17_CTG4 WIBR fin joingreen 34834 1 100  
AC068874.21 RP11-399J11 HSCHR17_CTG4 WIBR fin joinyellow 80063 33 99.876 >0 gap of 25bp or more, not simple sequence
AC087651.19 RP11-309N17 HSCHR17_CTG4 WIBR fin joingreen 79709 3 99.997 simple sequence in gap
AC111186.11 RP11-1112G13 HSCHR17_CTG4 WIBR fin joingreen 5693 3 99.982 simple sequence in gap
AC022211.5 RP11-649A18 HSCHR17_CTG4 WUGSC fin joingreen 28010 1 100 simple sequence in gap
AC011933.17 RP11-16C1 HSCHR17_CTG4 WIBR fin joingreen 77970 68 99.827 simple sequence in gap
AC100787.17 CTD-2589J4 HSCHR17_CTG4 WIBR fin joingreen 26163 16 99.713 simple sequence in gap
AC087749.12 RP11-474I11 HSCHR17_CTG4 WIBR fin joingreen 22039 7 99.918 simple sequence in gap
AC087289.9 RP11-552F3 HSCHR17_CTG4 WIBR fin joingreen 19345 9 99.912 simple sequence in gap
AC040980.14 RP11-685I11 HSCHR17_CTG4 WIBR fin joinblack 70418 42 99.861 initial certificate; >0 gap of 50bp or more, not simple sequence
AC018665.9 RP11-449J21 HSCHR17_CTG4 WIBR fin joingreen 67756 16 99.901 simple sequence in gap
AC015801.25 RP11-854A13 HSCHR17_CTG4 WIBR fin joingreen 16673 1 99.994  
AC090699.10 RP11-794C22 HSCHR17_CTG4 WIBR fin joingreen 12706 1 100 simple sequence in gap
AC015802.21 RP11-666A8 HSCHR17_CTG4 WIBR fin joingreen 19128 1 100  
AC005837.1 RP11-318A15 HSCHR17_CTG4 WIBR fin joingreen 30706 13 99.899 simple sequence in gap
AC027694.8 CTD-2246P4 HSCHR17_CTG4 WIBR fin joingreen 12251 5 99.926 simple sequence in gap
AC016168.18 RP11-87G24 HSCHR17_CTG4 WIBR fin joingreen 11371 0 100  
AC015815.14 RP11-21O15 HSCHR17_CTG4 WIBR fin joingreen 3346 2 99.910 simple sequence in gap
AC068594.15 RP11-285E9 HSCHR17_CTG4 WIBR fin joinblack 48722 28 99.791 initial certificate; >0 gap of 50bp or more, not simple sequence
AC111182.21 RP11-936I5 HSCHR17_CTG4 WIBR fin joingreen 55305 1 100 simple sequence in gap
AC111170.11 RP11-75C10 HSCHR17_CTG4 WIBR fin joingreen 8524 0 100  
AC021683.10 RP11-13K12 HSCHR17_CTG4 WIBR fin joingreen 45618 0 100  
AC104981.9 RP11-316M20 HSCHR17_CTG4 WIBR fin joingreen 4583 3 99.978 simple sequence in gap
AC015804.14 RP11-637C24 HSCHR17_CTG4 WIBR fin joingreen 10072 0 100  
AC021593.15 RP11-153A23 HSCHR17_CTG4 WIBR fin joingreen 54235 0 99.998  
AC087645.19 RP11-219G17 HSCHR17_CTG4 WIBR fin joingreen 4359 4 99.771 simple sequence in gap
AC061992.11 RP11-806H10 HSCHR17_CTG4 WIBR fin joinyellow 10308 15 99.379 identity < 99.6%
AC016182.24 RP11-559N14 HSCHR17_CTG4 WIBR fin joingreen 2269 0 99.868  
AC099804.3 CTD-2357A8 HSCHR17_CTG4 WIBR fin joingreen 34117 1 99.988 simple sequence in gap
AC022966.13 RP11-323N12 HSCHR17_CTG4 WIBR fin joingreen 1673 0 100  
AC100788.8 CTD-2373H9 HSCHR17_CTG4 WIBR fin joingreen 44394 14 99.932 simple sequence in gap
AC073624.28 RP11-537K14 HSCHR17_CTG4 WIBR fin joingreen 3331 0 99.880  
AC021534.19 RP11-398J5 HSCHR17_CTG4 WIBR fin joingreen 84007 1 99.999  
AC020689.8 RP11-440M23 HSCHR17_CTG4 WIBR fin joingreen 57716 1 100  
AC055858.18 RP11-682M7 HSCHR17_CTG4 WIBR fin joingreen 11134 2 99.982 simple sequence in gap
AC142247.2 XXFOS-85526C9 HSCHR17_CTG4 WIBR fin
? CH17-351M24 HSCHR17_CTG4  
AC027824.17 RP11-762A9 HSCHR17_CTG4 WIBR fin joingreen 2330 1 99.957 simple sequence in gap
AC105337.7 CTD-2116F7 HSCHR17_CTG4 WIBR fin joingreen 30439 2 99.961 simple sequence in gap
AC100791.15 RP11-353N14 HSCHR17_CTG4 WIBR fin joinyellow 114802 47 99.805 >0 gap of 25bp or more, not simple sequence
AC116025.21 ? HSCHR17_CTG4 WIBR fin joingreen 43009 8 99.907 simple sequence in gap
AC087741.18 RP11-334C17 HSCHR17_CTG4 WIBR fin joinblack 41528 10 99.822 initial certificate; >0 gap of 50bp or more, not simple sequence
AC123764.18 CTC-784N20 HSCHR17_CTG4 WIBR fin joingreen 19189 6 99.927 simple sequence in gap
AC124319.13 CTD-2047H16 HSCHR17_CTG4 WIBR fin joingreen 8361 0 100  
AC120024.22 CTD-2526A2 HSCHR17_CTG4 WIBR fin joingreen 43402 15 99.910 simple sequence in gap
AC109327.10 RP11-93C20 HSCHR17_CTG4 WIBR fin joingreen 17309 0 100  
AC133012.5 RP11-582A10 HSCHR17_CTG4 WIBR fin joinyellow 15748 9 99.162 >0 gap of 25bp or more, not simple sequence; identity < 99.6%
AC016245.8 RP11-28G8 HSCHR17_CTG4 WIBR fin joingreen 12457 2 99.855 simple sequence in gap
AC127496.5 CTD-2561B21 HSCHR17_CTG4 WIBR fin joinyellow 35758 15 99.793 >0 gap of 25bp or more, not simple sequence
AC115099.6 RP11-149I9 HSCHR17_CTG4 WIBR fin joingreen 21152 0 100  
AC027601.25 RP11-455O6 HSCHR17_CTG4 WIBR fin joinblack 8951 4 99.899 initial certificate; half-dovetail of >50bp
AC110285.14 RP11-1055B8 HSCHR17_CTG4 WIBR fin joingreen 13054 2 99.854 simple sequence in gap
AC139149.6 RP13-766D20 HSCHR17_CTG4 WIBR fin joingreen 26431 7 99.860 simple sequence in gap
AC137896.5 RP11-765O14 HSCHR17_CTG4 WIBR fin joinblack 41675 14 99.892 initial certificate; >0 gap of 50bp or more, not simple sequence
AC139530.3 RP13-1032I1 HSCHR17_CTG4 WIBR fin joingreen 30471 4 99.928 simple sequence in gap
AC145208.2 XXFOS-85405H6 HSCHR17_CTG4 WIBR fin joingreen 28779 11 99.864 simple sequence in gap
AC232305.2 ABC7-494722A3 HSCHR17_CTG4 WUGSC fin
GAP TYPE-3    
AC174470.1 WI2-2664G12 HSCHR17_CTG9 UWGC fin joinred 39071 9 99.954 >0 gap of 50bp or more, not simple sequence
AC145207.2 RP11-498C9 HSCHR17_CTG9 WIBR fin joingreen 5963 0 100  
AC137723.6 RP11-1182P23 HSCHR17_CTG9 WIBR fin joingreen 5023 0 100  
AC135056.4 RP13-650J16 HSCHR17_CTG9 WIBR fin joinblack 26978 20 99.659 initial certificate; >0 gap of 50bp or more, not simple sequence
AC129510.15 RP11-1376P16 HSCHR17_CTG9 WIBR fin joinyellow 11581 4 99.827 >0 gap of 25bp or more, not simple sequence
AC132872.17 RP13-516M14 HSCHR17_CTG9 WIBR fin joingreen 33410 0 99.994  
AC132938.9 RP13-20L14 HSCHR17_CTG9 WIBR fin joingreen 89463 7 99.985 simple sequence in gap
AC124287.10 RP13-991F5 HSCHR17_CTG9 WIBR fin joinyellow 29944 4 99.997 >0 gap of 25bp or more, not simple sequence
AC124283.11 RP13-638C3 HSCHR17_CTG9 WIBR fin joingreen 4511 2 99.823 simple sequence in gap
AC024361.21 RP11-388C12 HSCHR17_CTG9 WIBR fin joinblack 84884 52 99.784 initial certificate; >0 gap of 500bp or more, not simple sequence
AC068014.16 RP11-567O16 HSCHR17_CTG9 WIBR fin joingreen 21457 6 99.814 simple sequence in gap
AC068584.11 RP11-450A4 HSCHR17_CTG9 WIBR fin joingreen 15048 1 100 simple sequence in gap
AC087222.21 RP11-497H17 HSCHR17_CTG9 WIBR fin joingreen 14753 2 99.925 simple sequence in gap
AC130371.4 RP11-1197K16 HSCHR17_CTG9 WIBR fin joinred 2897 3 99.689 half-dovetail of >50bp
AC144831.2 XXFOS-86664F1 HSCHR17_CTG9 WIBR fin joinred 5637 0 99.947 half-dovetail of >50bp
AC139099.2 ? HSCHR17_CTG9 WIBR fin
GAP TELOMERE 10000