Human TPF View for chromsome 16

Find a TPF

Join Legend: Click on the colored ball in the 'join' column to see alignment details.

Serious alignment problem, requires review
Minor alignment problem
Excellent alignment

Certificate submitted, not yet approved
Certificate submitted and approved
Join not evaluated
Valid, contained clone

tpf view for chr 16 (reference)
acc	name	ctg	center	status	align length	gaps	% id	comments
GAP	TELOMERE	10000
Z84812.1	?	Hschr16_ctg1		unk	442	0	100	alignment length < 2000
Z84723.1	?	Hschr16_ctg1		unk	332	0	100	alignment length < 2000
Z69719.1	CNFG9	Hschr16_ctg1	SC	fin	107	0	100
Z69720.1	CRA36	Hschr16_ctg1	SC	fin	688	0	100	alignment length < 2000
Z84722.1	?	Hschr16_ctg1		unk	194	0	100	alignment length < 2000
Z84813.1	?	Hschr16_ctg1		unk	200	0	100	alignment length < 2000
Z69666.1	24F8	Hschr16_ctg1	SC	fin	307	0	100	alignment length < 2000
Z84721.1	?	Hschr16_ctg1		unk	103	0	100	alignment length < 2000
Z69706.2	LA16c-OS12	Hschr16_ctg1	SC	fin	101	0	100
Z69890.1	CRJ14	Hschr16_ctg1	SC	fin	95	0	100
AC004754.1	?	Hschr16_ctg1	JGI	fin	10112	1	100
Z69667.1	LA16c-314G4	Hschr16_ctg1	SC	fin	104	0	100
Z99754.1	LA16c-419C1	Hschr16_ctg1	SC	fin	13142	2	99.985
AC004652.1	?	Hschr16_ctg1	JGI	fin	10984	0	99.991
AC005202.1	?	Hschr16_ctg1	JGI	fin	1458	0	100
Z97634.26	LA16c-367G8	Hschr16_ctg1	SC	fin	100	0	100
AL023881.24	LA16c-359F1	Hschr16_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL049542.10	PAC196A12	Hschr16_ctg1	SC	fin	100	0	100
Z98882.4	LA16c-356B8	Hschr16_ctg1	SC	fin	100	0	100
Z97986.3	LA16c-366D1	Hschr16_ctg1	SC	fin	100	0	100
Z98883.5	LA16c-407A10	Hschr16_ctg1	SC	fin	104	0	100
Z98881.1	LA16c-338H10	Hschr16_ctg1	SC	fin	104	0	100
Z84479.1	LA16c-398G5	Hschr16_ctg1	SC	fin	105	0	100
AL022341.6	LA16c-349E10	Hschr16_ctg1	SC	fin	100	0	100
Z92544.1	LA16c-313D11	Hschr16_ctg1	SC	fin	100	0	100
Z97653.14	LA16c-380A1	Hschr16_ctg1	SC	fin	100	0	100
Z98258.1	LA16c-444G9	Hschr16_ctg1	SC	fin	104	0	100
AL031258.12	LA16c-335H7	Hschr16_ctg1	SC	fin	100	0	100
AL031033.5	LA16c-321D2	Hschr16_ctg1	SC	fin	100	0	100
AL023882.4	LA16c-398F6	Hschr16_ctg1	SC	fin	100	0	100
AL031008.1	LA16c-360A4	Hschr16_ctg1	SC	fin	100	0	100
AL031716.8	LA16c-360B4	Hschr16_ctg1	SC	fin	100	0	100
AL008727.2	LA16c-306A4	Hschr16_ctg1	SC	fin	100	0	100
Z93041.2	LA16c-366D3	Hschr16_ctg1	SC	fin	11457	1	99.991	simple sequence in gap
AC009041.10	RP11-161M6	Hschr16_ctg1	JGI	fin	13257	0	99.925
AL031713.8	LA16c-349E11	Hschr16_ctg1	SC	fin	100	0	100
AL031598.4	LA16c-381G6	Hschr16_ctg1	SC	fin	11794	3	99.864	simple sequence in gap
AC120498.2	RP11-616M22	Hschr16_ctg1	JGI	fin	5455	1	99.982	simple sequence in gap
AL031714.8	LA16c-358B7	Hschr16_ctg1	SC	fin	100	0	100
AL031709.12	LA16c-316G12	Hschr16_ctg1	SC	fin	100	0	100
AL031721.1	LA16c-399E4	Hschr16_ctg1	SC	fin	100	0	100
AL032819.32	LA16c-312E8	Hschr16_ctg1	SC	fin	100	0	100
AL137252.2	LA16c-438F12	Hschr16_ctg1	SC	fin	100	0	100
AL031600.4	LA16c-390E6	Hschr16_ctg1	SC	fin	100	0	100
AL031705.25	LA16c-305C8	Hschr16_ctg1	SC	fin	100	0	100
AL031720.5	LA16c-385E7	Hschr16_ctg1	SC	fin	100	0	100
AL031719.12	LA16c-380F5	Hschr16_ctg1	SC	fin	100	0	100
Z97633.2	LA16c-313F4	Hschr16_ctg1	SC	fin	100	0	100
AL133297.1	LA16c-425C2	Hschr16_ctg1	SC	fin	100	0	100
Z97652.9	LA16c-395F10	Hschr16_ctg1	SC	fin	100	0	100
AL031708.3	LA16c-315G5	Hschr16_ctg1	SC	fin	100	0	100
AL031009.1	LA16c-431H6	Hschr16_ctg1	SC	fin	100	0	100
AL031710.11	LA16c-329F2	Hschr16_ctg1	SC	fin	100	0	100
AL031717.11	LA16c-361A3	Hschr16_ctg1	SC	fin	2802	0	99.857
AC012180.6	RP11-31I10	Hschr16_ctg1	JGI	fin	24850	17	99.738	simple sequence in gap
AL031722.20	LA16c-429E7	Hschr16_ctg1	SC	fin	100	0	100
AL132823.2	LA16c-318D2	Hschr16_ctg1	SC	fin	100	0	99.000	identity < 99.6%
AL499628.1	DJ76P10	Hschr16_ctg1	SC	fin	100	0	100
AL031723.56	LA16c-439A6	Hschr16_ctg1	SC	fin	35535	4	99.972	simple sequence in gap
AC005363.1	47H2	Hschr16_ctg1	JGI	fin	32515	2	99.969	simple sequence in gap
AC005606.3	109C8	Hschr16_ctg1	JGI	fin	2954	1	99.966
AC093513.3	CTD-2517G10	Hschr16_ctg1	JGI	fin	13448	0	99.993
AC009065.8	RP11-304L19	Hschr16_ctg1	JGI	fin	80262	19	99.909	simple sequence in gap
AC098805.2	RP11-657D15	Hschr16_ctg1	JGI	fin	18773	15	99.787	>0 gap of 50bp or more, not simple sequence
AC106820.4	RP11-715J22	Hschr16_ctg1	JGI	fin	68209	25	99.913	half-dovetail of >0bp and <=50bp
AC093525.3	RP11-20I23	Hschr16_ctg1	JGI	fin	54920	2	99.985	simple sequence in gap
AC141586.2	CTD-3126B10	Hschr16_ctg1	JGI	fin	56785	0	99.995
AC092117.4	CTD-2270P14	Hschr16_ctg1	JGI	fin	16504	0	99.982
AC005361.1	LA16c-352F10	Hschr16_ctg1	JGI	fin	729	0	100
AC003965.1	LA16c-325D7	Hschr16_ctg1	JGI	fin	1176	0	100
AC004234.1	LA16c-399H11	Hschr16_ctg1	JGI	fin	3726	0	100
AC004034.2	LA16c-321D4	Hschr16_ctg1	JGI	fin	3490	0	100
AC004235.1	LA16c-432A1	Hschr16_ctg1	JGI	fin	5004	0	100
AC004233.1	LA16c-380H5	Hschr16_ctg1	JGI	fin	20612	4	99.767	simple sequence in gap
AC108134.3	RP11-473M20	Hschr16_ctg1	JGI	fin	127978	49	99.887	half-dovetail of >0bp and <=50bp; >0 gap of 25bp or more, not simple sequence
AJ003147.1	?	Hschr16_ctg1		unk	9203	1	99.989
AC004232.1	LA16c-360H6	Hschr16_ctg1	JGI	fin	7708	2	99.948	simple sequence in gap
AC025283.6	RP11-433P17	Hschr16_ctg1	JGI	fin	2752	1	99.855
AC004224.1	LA16c-306E5	Hschr16_ctg1	JGI	fin	11811	0	100
AC004494.1	LA16c-390H2	Hschr16_ctg1	JGI	fin	4250	0	100
AC006111.4	RP11-461A8	Hschr16_ctg1	JGI	fin	1610	0	100
AC004651.1	?	Hschr16_ctg1	JGI	fin	1828	0	100
AC004509.1	?	Hschr16_ctg1	JGI	fin	892	0	100
AC007151.2	RP11-95J11	Hschr16_ctg1	JGI	fin	49140	1	99.988	half-dovetail of >0bp and <=50bp
AC005736.1	RP11-462G12	Hschr16_ctg1	JGI	fin	17219	4	99.977	half-dovetail of >0bp and <=50bp
AC009171.6	RP11-95P2	Hschr16_ctg1	JGI	fin	7793	2	99.846	simple sequence in gap
AC005356.1	?	Hschr16_ctg1	JGI	fin	31034	4	99.958	simple sequence in gap
AC012676.5	RP11-295D4	Hschr16_ctg1	JGI	fin	20256	1	100	simple sequence in gap
AC007606.8	RP11-35P16	Hschr16_ctg1	JGI	fin	78545	36	99.843	simple sequence in gap
AC023830.9	RP11-709D24	Hschr16_ctg1	JGI	fin	5715	0	100
AC020663.1	RP11-127I20	Hschr16_ctg1	JGI	fin	54038	0	99.994
AC027687.7	RP11-61L4	Hschr16_ctg1	JGI	fin	53733	5	99.953	simple sequence in gap
AC007011.1	RP11-165E7	Hschr16_ctg1	JGI	fin	72519	0	100
AC026458.8	RP11-10K17	Hschr16_ctg1	JGI	fin	8771	0	100
AC074051.4	RP11-382N13	Hschr16_ctg1	JGI	fin	13912	2	99.842	simple sequence in gap
AC005569.1	LA16c-317H7	Hschr16_ctg1	JGI	fin	7715	0	100
AC005364.1	LA16c-53H2	Hschr16_ctg1	JGI	fin	15039	1	99.973	simple sequence in gap
AC005347.1	LA16c-308C6	Hschr16_ctg1	JGI	fin	9750	0	100
AC005563.1	LA16c-324F6	Hschr16_ctg1	JGI	fin	15080	2	99.867	simple sequence in gap
AC023822.8	RP11-124K4	Hschr16_ctg1	JGI	fin	51330	0	99.994	half-dovetail of >0bp and <=50bp
AC005737.1	RP11-97H22	Hschr16_ctg1	JGI	fin	14507	0	100	half-dovetail of >0bp and <=50bp
AC012175.7	RP11-19H6	Hschr16_ctg1	JGI	fin	23758	0	100
AC009135.12	RP11-509E10	Hschr16_ctg1	JGI	fin	94868	2	100	simple sequence in gap
AC023829.6	RP11-578P21	Hschr16_ctg1	JGI	fin	5490	5	99.836	simple sequence in gap
AC007217.5	RP11-167B4	Hschr16_ctg1	JGI	fin	20676	7	99.850	simple sequence in gap
AC006112.4	RP11-472H7	Hschr16_ctg1	JGI	fin	52975	18	99.762	simple sequence in gap
AC007223.5	RP11-468I15	Hschr16_ctg1	JGI	fin	28802	0	100
AC007012.1	RP11-185J20	Hschr16_ctg1	JGI	fin	40454	22	99.597	identity < 99.6%
AC125796.2	RP11-420N3	Hschr16_ctg1	JGI	fin	58771	0	100
AC131390.3	RP11-349E19	Hschr16_ctg1	JGI	fin	39795	1	99.997	simple sequence in gap
AC022206.3	RP11-545E8	Hschr16_ctg1	WUGSC	fin	4082	1	99.755
AC079410.3	CTC-775M10	Hschr16_ctg1	JGI	fin	40355	14	99.760	simple sequence in gap
AC007222.5	RP11-441K8	Hschr16_ctg1	JGI	fin	1084	1	99.539	identity < 99.6%
AC006075.1	RP11-192K18	Hschr16_ctg1	JGI	fin	102838	30	99.848	simple sequence in gap
AC027683.6	CTD-2357P14	Hschr16_ctg1	JGI	fin	3693	0	99.892	half-dovetail of >0bp and <=50bp
AC005774.1	RP11-26O3	Hschr16_ctg1	JGI	fin	54965	0	99.996	half-dovetail of >0bp and <=50bp
AC093522.4	RP11-172I18	Hschr16_ctg1	JGI	fin	407	0	100
AC133001.1	RP11-498M24	Hschr16_ctg1	JGI	fin	356	0	100
AC093515.4	CTD-2535I10	Hschr16_ctg1	JGI	fin	14346	4	99.840	simple sequence in gap
AC018768.7	RP11-564M2	Hschr16_ctg1	JGI	fin	33797	0	100
AC018767.3	RP11-279O17	Hschr16_ctg1	JGI	fin	70197	20	99.848	simple sequence in gap
AC018769.2	RP11-568A19	Hschr16_ctg1	JGI	fin	77290	42	99.708	simple sequence in gap
AC074052.6	RP11-483K5	Hschr16_ctg1	JGI	fin	30124	1	99.930	simple sequence in gap
AC137777.3	LA16c-500E3	Hschr16_ctg1	JGI	fin	5771	1	99.896	simple sequence in gap
AC140531.3	80800823G9	Hschr16_ctg1	JGI	fin
?	ABC12-49055600O16	Hschr16_ctg1
GAP	type-3
FP565343.3	ABC12-47014700E17	Hschr16_ctg1_1	SC	fin	2000	1	99.950
AC138420.2	LA16c-429C4	Hschr16_ctg1_1	JGI	fin	32884	16	99.687	simple sequence in gap
AC007224.5	RP11-475D10	Hschr16_ctg1_1	JGI	fin	5947	2	99.664	simple sequence in gap
AC012173.9	RP11-152P23	Hschr16_ctg1_1	JGI	fin	4605	2	99.783	simple sequence in gap
AC022167.7	RP11-77H9	Hschr16_ctg1_1	JGI	fin	12453	10	99.783	simple sequence in gap
AC087190.5	RP11-473I1	Hschr16_ctg1_1	JGI	fin	15265	7	99.817	simple sequence in gap
AC092122.5	RP11-102F12	Hschr16_ctg1_1	JGI	fin	34678	12	99.715	simple sequence in gap
AC012178.5	RP11-243A14	Hschr16_ctg1_1	JGI	fin	24771	4	99.887	simple sequence in gap
AC007221.2	RP11-418I22	Hschr16_ctg1_1	JGI	fin	27919	12	99.789	simple sequence in gap
AC007218.6	RP11-297M9	Hschr16_ctg1_1	JGI	fin	72183	3	99.997	simple sequence in gap
AC006531.1	RP11-113K5	Hschr16_ctg1_1	JGI	fin	9176	2	100	simple sequence in gap
AC026423.9	CTD-2169M19	Hschr16_ctg1_1	JGI	fin	18596	7	99.780	simple sequence in gap
AC133565.5	RP11-895K13	Hschr16_ctg1_1	JGI	fin	20961	0	100
AC022168.6	RP11-89D3	Hschr16_ctg1_1	JGI	fin	11184	5	99.821	simple sequence in gap
AC131649.2	RP11-609N14	Hschr16_ctg1_1	JGI	fin	74866	10	99.995	simple sequence in gap
AC027277.5	RP11-27M24	Hschr16_ctg1_1	JGI	fin	8675	1	100
AC007595.9	RP11-109M19	Hschr16_ctg1_1	JGI	fin	50598	19	99.858	>0 gap of 50bp or more, not simple sequence
AC074136.4	CTD-2318B16	Hschr16_ctg1_1	JGI	fin	8005	1	99.825	simple sequence in gap
AC133065.3	RP11-876N24	Hschr16_ctg1_1	JGI	fin	19634	8	99.903	simple sequence in gap
AC007014.1	RP11-66H6	Hschr16_ctg1_1	JGI	fin	23242	0	100
AC007220.4	RP11-396B14	Hschr16_ctg1_1	JGI	fin	26910	16	99.840	simple sequence in gap
AC009121.8	RP11-485G7	Hschr16_ctg1_1	JGI	fin	3648	1	99.726	simple sequence in gap
AC099489.2	CTD-3088G3	Hschr16_ctg1_1	JGI	fin	34214	8	99.947	simple sequence in gap
AC007616.5	RP11-547D14	Hschr16_ctg1_1	JGI	fin	29297	0	99.997
AC007613.8	RP11-490O6	Hschr16_ctg1_1	JGI	fin	68863	2	100	simple sequence in gap
AC010654.8	RP11-486I11	Hschr16_ctg1_1	JGI	fin	19637	10	99.842	simple sequence in gap
AC007216.2	RP11-166B2	Hschr16_ctg1_1	JGI	fin	14857	1	99.973	simple sequence in gap
AC007601.7	RP11-276H1	Hschr16_ctg1_1	JGI	fin	16949	3	99.853	simple sequence in gap
AC092365.3	RP11-450B4	Hschr16_ctg1_1	JGI	fin	3715	1	99.839
AC007598.7	RP11-165M1	Hschr16_ctg1_1	JGI	fin	7939	1	100	simple sequence in gap
AC131391.2	RP11-552C15	Hschr16_ctg1_1	JGI	fin	6465	5	99.304	identity < 99.6%
AC010333.7	CTD-3037G24	Hschr16_ctg1_1	JGI	fin	32318	0	100
AC109597.3	CTD-2583P5	Hschr16_ctg1_1	JGI	fin	66017	17	99.967	simple sequence in gap
AC092324.3	RP11-14K2	Hschr16_ctg1_1	JGI	fin	14930	5	99.859	simple sequence in gap
AC092380.4	RP11-727M7	Hschr16_ctg1_1	JGI	fin	36521	19	99.871	simple sequence in gap
AC009134.6	?	Hschr16_ctg1_1	JGI	fin	13494	1	99.993	simple sequence in gap
AC003119.1	?	Hschr16_ctg1_1	TIGR	fin	11931	7	99.874	simple sequence in gap
AC003009.1	?	Hschr16_ctg1_1	TIGR	fin	10465	0	99.971
U91319.1	?	Hschr16_ctg1_1	TIGR	fin	200	0	100
AF001551.3	?	Hschr16_ctg1_1	TIGR	fin	4784	2	99.958	simple sequence in gap
AC133560.5	RP11-58I6	Hschr16_ctg1_1	JGI	fin	20113	11	99.707	simple sequence in gap
U95741.1	?	Hschr16_ctg1_1	TIGR	fin	53337	8	99.910	simple sequence in gap
U95743.1	?	Hschr16_ctg1_1	TIGR	fin	41657	29	99.808	>0 gap of 50bp or more, not simple sequence
AC009173.9	RP11-99H5	Hschr16_ctg1_1	JGI	fin	65388	6	99.937	half-dovetail of >0bp and <=50bp
AC010401.7	CTD-2135D7	Hschr16_ctg1_1	JGI	fin	30772	12	99.792	simple sequence in gap
AC130650.2	CTA-276F8	Hschr16_ctg1_1	JGI	fin	30230	4	99.947	simple sequence in gap
AC012626.10	CTD-2118O12	Hschr16_ctg1_1	JGI	fin	104872	54	99.883	>0 gap of 25bp or more, not simple sequence
AC040173.5	RP11-65J21	Hschr16_ctg1_1	JGI	fin	20607	2	99.990	simple sequence in gap
AC092291.3	CTD-2502C11	Hschr16_ctg1_1	JGI	fin	72885	7	99.992	simple sequence in gap
AC009167.9	RP11-82O18	Hschr16_ctg1_1	JGI	fin	10527	2	99.991	simple sequence in gap
AC136443.3	RP11-719K4	Hschr16_ctg1_1	JGI	fin	46311	0	100
AC138932.4	RP11-680G24	Hschr16_ctg1_1	JGI	fin	28324	0	100
AC139256.5	RP11-1186N24	Hschr16_ctg1_1	JGI	fin	2918	0	100
AC126763.4	RP11-1390J18	Hschr16_ctg1_1	JGI	fin	86699	2	100	simple sequence in gap
AC137803.2	RP11-72I8	Hschr16_ctg1_1	JGI	fin	100900	1	100	simple sequence in gap
AC140504.2	RP11-1021N1	Hschr16_ctg1_1	JGI	fin	11391	3	99.947	simple sequence in gap
AC026401.7	CTB-193M12	Hschr16_ctg1_1	JGI	fin	21757	0	99.982
AF001548.1	?	Hschr16_ctg1_1	TIGR	fin	15056	7	99.847	simple sequence in gap
AC024120.5	CTA-1000C7	Hschr16_ctg1_1	JGI	fin	44056	18	99.923	>0 gap of 25bp or more, not simple sequence
AC130651.2	CTA-972D3	Hschr16_ctg1_1	JGI	fin	18371	9	99.858	simple sequence in gap
AC025778.8	CTD-2504F3	Hschr16_ctg1_1	JGI	fin	99004	47	99.888	>0 gap of 50bp or more, not simple sequence
AC136624.3	RP11-517A5	Hschr16_ctg1_1	JGI	fin	130609	0	100
AC138969.2	RP11-958N24	Hschr16_ctg1_1	JGI	fin	3258	2	99.969	simple sequence in gap
AC136619.3	RP11-467M13	Hschr16_ctg1_1	JGI	fin	69746	0	99.999
AC136431.3	RP11-148M17	Hschr16_ctg1_1	JGI	fin	19825	13	99.939	simple sequence in gap
AC092326.4	RP11-14N9	Hschr16_ctg1_1	JGI	fin	111531	16	99.972	simple sequence in gap
AC093526.5	RP11-213K2	Hschr16_ctg1_1	JGI	fin	23091	14	99.835	simple sequence in gap
AC098965.2	RP11-419L9	Hschr16_ctg1_1	JGI	fin	18615	0	99.984
AC109446.2	CTD-2576D5	Hschr16_ctg1_1	JGI	fin	843	0	100
AC099494.3	RP11-1102P22	Hschr16_ctg1_1	JGI	fin	8568	0	100
AC009152.8	RP11-567P19	Hschr16_ctg1_1	JGI	fin	7932	4	99.899	simple sequence in gap
AC109495.4	RP11-916L7	Hschr16_ctg1_1	JGI	fin	38415	13	99.794	simple sequence in gap
AC106783.3	RP11-347K10	Hschr16_ctg1_1	JGI	fin	78347	9	99.971	>0 gap of 50bp or more, not simple sequence
AC025277.10	CTD-3229J4	Hschr16_ctg1_1	JGI	fin	10362	2	99.990	simple sequence in gap
AC004097.1	?	Hschr16_ctg1_1	TIGR	fin	11799	0	99.992
AC010601.6	CTA-481E9	Hschr16_ctg1_1	JGI	fin	18895	4	99.899	simple sequence in gap
AC131384.1	RP11-465L11	Hschr16_ctg1_1	JGI	fin	56161	0	100
AC091489.4	RP11-164A6	Hschr16_ctg1_1	JGI	fin	78794	19	99.853	half-dovetail of >0bp and <=50bp
AC008785.7	CTD-2036A2	Hschr16_ctg1_1	JGI	fin	78509	56	99.636	>2 gap of 25bp or more, not simple sequence
AC126755.3	RP11-1212A22	Hschr16_ctg1_1	JGI	fin	32535	3	99.966	>0 gap of 50bp or more, not simple sequence
AC136618.3	RP11-457I16	Hschr16_ctg1_1	JGI	fin	34538	9	99.983	simple sequence in gap
AC138811.3	RP11-1035H13	Hschr16_ctg1_1	JGI	fin	151276	1	99.999	simple sequence in gap
AC026472.8	RP11-511J24	Hschr16_ctg1_1	JGI	fin	16248	4	99.981	simple sequence in gap
AC092287.4	CTD-2288F12	Hschr16_ctg1_1	JGI	fin	21027	5	99.971	simple sequence in gap
AC099518.3	RP11-626G11	Hschr16_ctg1_1	JGI	fin	35456	10	99.921	simple sequence in gap
AC010494.4	CTD-2349B8	Hschr16_ctg1_1	JGI	fin	34866	9	99.931	simple sequence in gap
AC003003.1	?	Hschr16_ctg1_1	TIGR	fin	27988	12	99.846	simple sequence in gap
AC130456.2	CTA-363E6	Hschr16_ctg1_1	JGI	fin	12735	13	99.717	>0 gap of 50bp or more, not simple sequence
AC003108.1	?	Hschr16_ctg1_1	TIGR	fin	140205	19	99.946	simple sequence in gap
AC012621.8	CTD-2055J8	Hschr16_ctg1_1	JGI	fin	4778	0	100
AC002550.1	?	Hschr16_ctg1_1	TIGR	fin	2098	0	100
AC027130.5	CTD-2380F24	Hschr16_ctg1_1	JGI	fin	104062	10	99.967	simple sequence in gap
AC134300.3	CTC-496I23	Hschr16_ctg1_1	JGI	fin	30918	2	100	simple sequence in gap
AC002990.1	?	Hschr16_ctg1_1	TIGR	fin	5979	0	99.916
AC021089.8	CTD-2264D9	Hschr16_ctg1_1	JGI	fin	3993	3	99.800	simple sequence in gap
AC092132.2	RP11-204E4	Hschr16_ctg1_1	JGI	fin	45428	15	99.839	simple sequence in gap
AC106796.3	RP11-429K17	Hschr16_ctg1_1	JGI	fin	4837	1	99.690	simple sequence in gap
AC137056.3	CTD-2194A8	Hschr16_ctg1_1	JGI	fin	61953	0	100
AC141053.2	CTD-3076M17	Hschr16_ctg1_1	JGI	fin	19482	1	99.949	simple sequence in gap
AC141273.2	RP11-143N13	Hschr16_ctg1_1	JGI	fin	22299	2	99.987	simple sequence in gap
AC020926.8	CTD-2152G12	Hschr16_ctg1_1	JGI	fin	74137	12	99.942	simple sequence in gap
AC004381.1	?	Hschr16_ctg1_1	TIGR	fin	2441	0	100
AC002394.1	?	Hschr16_ctg1_1	TIGR	fin	56733	7	99.988	simple sequence in gap
AC105410.1	CTD-2348G11	Hschr16_ctg1_1	JGI	fin	23579	4	99.966	simple sequence in gap
AC008551.5	CTC-508F8	Hschr16_ctg1_1	JGI	fin	43718	5	99.982	simple sequence in gap
AF001550.1	?	Hschr16_ctg1_1	TIGR	fin	14659	3	99.973	simple sequence in gap
AC008740.7	CTD-2547E10	Hschr16_ctg1_1	JGI	fin	15260	8	99.902	simple sequence in gap
AC005632.2	CTB-31N19	Hschr16_ctg1_1	WUGSC	fin	32855	9	99.966	simple sequence in gap
AC092719.3	RP11-338J22	Hschr16_ctg1_1	JGI	fin	6444	0	100
AC092375.4	RP11-645C24	Hschr16_ctg1_1	JGI	fin	79519	9	99.975	simple sequence in gap
AC092119.3	CTD-2649C14	Hschr16_ctg1_1	JGI	fin	21853	5	99.986	simple sequence in gap
AC009019.10	RP11-101E7	Hschr16_ctg1_1	JGI	fin	61385	1	100	simple sequence in gap
AC009034.10	RP11-141O15	Hschr16_ctg1_1	JGI	fin	19843	4	99.995	simple sequence in gap
AC092338.4	RP11-21M24	Hschr16_ctg1_1	JGI	fin	6656	0	99.970
AC106788.3	RP11-368J21	Hschr16_ctg1_1	JGI	fin	5097	0	99.843
AC009021.8	RP11-105C19	Hschr16_ctg1_1	JGI	fin	4891	0	99.898
AC130466.2	CTC-591M7	Hschr16_ctg1_1	JGI	fin	10524	0	99.991
AC130450.3	CTA-237H1	Hschr16_ctg1_1	JGI	fin	65514	20	99.741	simple sequence in gap
AC127459.3	RP11-20G6	Hschr16_ctg1_1	JGI	fin	4645	0	100
AC099482.3	CTC-391G2	Hschr16_ctg1_1	JGI	fin	14624	0	100
AC130452.3	CTA-279B10	Hschr16_ctg1_1	JGI	fin	36556	15	99.953	simple sequence in gap
AC008915.11	CTD-2270L9	Hschr16_ctg1_1	JGI	fin	1091	2	99.908	simple sequence in gap
AC002400.1	?	Hschr16_ctg1_1	TIGR	fin	46195	24	99.814	>0 gap of 25bp or more, not simple sequence
AC008870.8	CTD-2196E14	Hschr16_ctg1_1	JGI	fin	84689	1	100	simple sequence in gap
AC012317.7	CTD-2385L22	Hschr16_ctg1_1	JGI	fin	5645	1	99.947
AC130454.2	CTA-345G4	Hschr16_ctg1_1	JGI	fin	80003	16	99.938	simple sequence in gap
AC010268.10	CTC-484E17	Hschr16_ctg1_1	JGI	fin	20414	5	99.931	simple sequence in gap
AC130448.2	CTA-113A6	Hschr16_ctg1_1	JGI	fin	4464	1	100	simple sequence in gap
AC004125.1	?	Hschr16_ctg1_1	TIGR	fin	14741	5	99.939	simple sequence in gap
AC008938.9	CTD-2313J23	Hschr16_ctg1_1	JGI	fin	70397	16	99.913	simple sequence in gap
AC010321.8	CTD-2540M10	Hschr16_ctg1_1	JGI	fin	15302	8	99.882	simple sequence in gap
AC002565.1	?	Hschr16_ctg1_1	TIGR	fin	30627	12	99.905	simple sequence in gap
AC008731.8	CTD-2515A14	Hschr16_ctg1_1	JGI	fin	5599	0	100
AC010545.9	RP11-449H11	Hschr16_ctg1_1	JGI	fin	86363	56	99.826	>0 gap of 50bp or more, not simple sequence
AC133552.3	RP11-266L9	Hschr16_ctg1_1	JGI	fin	35356	23	99.904	simple sequence in gap
AC008741.7	CTD-2547G23	Hschr16_ctg1_1	JGI	fin	6966	0	100
AC130451.2	CTA-249B10	Hschr16_ctg1_1	JGI	fin	73204	10	99.985	simple sequence in gap
AF265340.1	?	Hschr16_ctg1_1	IMB	fin	8692	6	99.862	simple sequence in gap
AC092141.4	RP11-478K1	Hschr16_ctg1_1	JGI	fin	11505	0	100
AC093524.4	RP11-185O21	Hschr16_ctg1_1	JGI	fin	37606	15	99.878	simple sequence in gap
AC093516.5	CTD-2537L13	Hschr16_ctg1_1	JGI	fin	63702	0	100
AC093509.3	CTD-2337L2	Hschr16_ctg1_1	JGI	fin	21703	0	99.995
AC093511.4	CTD-2507C6	Hschr16_ctg1_1	JGI	fin	61481	8	99.928	simple sequence in gap
AC009158.7	RP11-67I10	Hschr16_ctg1_1	JGI	fin	5120	6	99.629	simple sequence in gap
AC130464.3	CTA-88D1	Hschr16_ctg1_1	JGI	fin	17502	1	99.989
AC008756.9	CTD-3028M10	Hschr16_ctg1_1	JGI	fin	111583	35	99.846	>0 gap of 50bp or more, not simple sequence
AC002331.1	?	Hschr16_ctg1_1	TIGR	fin	14862	7	99.906	simple sequence in gap
AC009035.9	RP11-142A12	Hschr16_ctg1_1	JGI	fin	39664	12	99.856	simple sequence in gap
AC130460.2	CTA-485G10	Hschr16_ctg1_1	JGI	fin	33098	11	99.906	simple sequence in gap
AC084797.5	RP11-62O3	Hschr16_ctg1_1	JGI	fin	26510	0	100
AC092725.3	RP11-673P17	Hschr16_ctg1_1	JGI	fin	61307	0	100
AC109449.4	RP11-147I4	Hschr16_ctg1_1	JGI	fin	78126	23	99.885	simple sequence in gap
AC106739.5	CTD-3203P2	Hschr16_ctg1_1	JGI	fin	55933	9	99.911	simple sequence in gap
AC004525.1	?	Hschr16_ctg1_1	TIGR	fin	35410	14	99.958	simple sequence in gap
AC002303.1	?	Hschr16_ctg1_1	TIGR	fin	61875	11	99.947	simple sequence in gap
AC025275.4	CTC-502C3	Hschr16_ctg1_1	JGI	fin	21750	0	99.995
AC002551.1	?	Hschr16_ctg1_1	TIGR	fin	31298	10	99.926	simple sequence in gap
AC016597.4	CTD-2049O4	Hschr16_ctg1_1	JGI	fin	34065	2	99.994	simple sequence in gap
AC092330.2	RP11-15I10	Hschr16_ctg1_1	JGI	fin	4376	0	100
AC008732.9	CTD-2519M14	Hschr16_ctg1_1	JGI	fin	5998	1	99.883	simple sequence in gap
AC130449.2	CTA-233A7	Hschr16_ctg1_1	JGI	fin	148766	38	99.922	simple sequence in gap
AC009030.10	RP11-13G6	Hschr16_ctg1_1	JGI	fin	73718	19	99.935	simple sequence in gap
AC136611.2	RP11-159J3	Hschr16_ctg1_1	JGI	fin	70583	1	100	simple sequence in gap
AC138904.3	RP11-57A19	Hschr16_ctg1_1	JGI	fin	11064	1	100	simple sequence in gap
AC138894.2	RP11-435I10	Hschr16_ctg1_1	JGI	fin	68450	0	100
AC020765.8	RP11-666O2	Hschr16_ctg1_1	JGI	fin	48897	0	100
AC145285.2	RP11-1348G14	Hschr16_ctg1_1	JGI	fin	155260	1	100	simple sequence in gap
AC116346.2	RP11-24N18	Hschr16_ctg1_1	JGI	fin	3016	0	100
AC133550.2	RP11-22P6	Hschr16_ctg1_1	JGI	fin	20392	7	99.892	simple sequence in gap
AC109460.3	RP11-264B17	Hschr16_ctg1_1	JGI	fin	61988	7	99.984	simple sequence in gap
AC112166.3	CTB-134H23	Hschr16_ctg1_1	JGI	fin	31994	14	99.919	simple sequence in gap
AC009093.10	RP11-426C22	Hschr16_ctg1_1	JGI	fin	14029	0	100
AC025279.6	RP11-231C14	Hschr16_ctg1_1	JGI	fin	104677	2	100	simple sequence in gap
AC133555.3	RP11-345J4	Hschr16_ctg1_1	JGI	fin	40825	1	100	simple sequence in gap
AC009086.6	RP11-368N21	Hschr16_ctg1_1	JGI	fin	59040	24	99.897	simple sequence in gap
AC023831.9	RP11-74E23	Hschr16_ctg1_1	JGI	fin	114956	1	99.999	simple sequence in gap
AC009133.7	?	Hschr16_ctg1_1	JGI	fin	43406	23	99.931	simple sequence in gap
AC120114.2	CTD-2574D22	Hschr16_ctg1_1	JGI	fin	30645	0	100
AC093512.2	CTD-2515O10	Hschr16_ctg1_1	JGI	fin	26798	0	100
AC012645.7	RP11-455F5	Hschr16_ctg1_1	JGI	fin	64567	26	99.907	>0 gap of 25bp or more, not simple sequence
AC106782.5	RP11-347C12	Hschr16_ctg1_1	JGI	fin	79802	24	99.927	simple sequence in gap
AC127457.3	RP11-100F10	Hschr16_ctg1_1	JGI	fin	6572	0	100
AC116348.3	RP11-297C4	Hschr16_ctg1_1	JGI	fin	54597	23	99.930	>0 gap of 25bp or more, not simple sequence
AC002310.1	?	Hschr16_ctg1_1	TIGR	fin	66291	1	99.994	simple sequence in gap
AC093249.4	RP11-146F11	Hschr16_ctg1_1	JGI	fin	85973	34	99.917	simple sequence in gap
AC106886.3	RP11-2C24	Hschr16_ctg1_1	JGI	fin	12993	7	99.808	simple sequence in gap
AC138417.3	LA16c-367E6	Hschr16_ctg1_1	JGI	fin	8578	1	99.918	simple sequence in gap
AC135048.2	RP11-1072A3	Hschr16_ctg1_1	JGI	fin	62607	1	99.998
AC135050.3	RP11-196G11	Hschr16_ctg1_1	JGI	fin	9267	0	100
AC009088.9	RP11-388M20	Hschr16_ctg1_1	JGI	fin	2534	3	99.684	simple sequence in gap
AC093520.4	RP11-120K18	Hschr16_ctg1_1	JGI	fin	80013	0	100
AC026471.6	RP11-452L6	Hschr16_ctg1_1	JGI	fin	1512	0	100
AC106730.2	CTD-2014E2	Hschr16_ctg1_1	JGI	fin	20287	0	100
AC074050.3	CTD-2358C21	Hschr16_ctg1_1	JGI	fin	30875	1	100	simple sequence in gap
AC002519.1	?	Hschr16_ctg1_1	TIGR	fin	13588	6	99.912	simple sequence in gap
AC034105.7	RP11-170L3	Hschr16_ctg1_1	JGI	fin	67292	4	99.952	simple sequence in gap
AC142381.2	RP11-1166P10	Hschr16_ctg1_1	JGI	fin	29242	0	100
AC133485.1	RP11-56L13	Hschr16_ctg1_1	JGI	fin	111061	1	99.999	simple sequence in gap
AC140878.2	RP11-1292F20	Hschr16_ctg1_1	JGI	fin	13811	0	100
AC133548.2	RP11-17M15	Hschr16_ctg1_1	JGI	fin	30710	0	100
AC138915.2	RP11-626K17	Hschr16_ctg1_1	JGI	fin	101457	0	100
AC137800.3	RP11-652G5	Hschr16_ctg1_1	JGI	fin	85354	1	100	simple sequence in gap
AC133569.4	RP11-96K14	Hschr16_ctg1_1	JGI	fin	22504	0	100
AC138907.2	RP11-586K12	Hschr16_ctg1_1	JGI	fin	132500	0	100
AC137761.3	RP11-67H24	Hschr16_ctg1_1	JGI	fin	10273	0	100
AC142086.3	RP11-989E6	Hschr16_ctg1_1	JGI	fin	26783	0	100
AC145350.2	RP11-19N8	Hschr16_ctg1_1	JGI	fin	112523	0	100
AC138869.2	RP11-1437A8	Hschr16_ctg1_1	JGI	fin	60080	0	100
AC141257.2	RP11-1277H1	Hschr16_ctg1_1	JGI	fin	48763	6	100	simple sequence in gap
AC136944.3	RP11-23E10	Hschr16_ctg1_1	JGI	fin	63580	2	100	simple sequence in gap
AC142384.2	RP11-293B20	Hschr16_ctg1_1	JGI	fin	52181	0	100
AC136428.3	RP11-104C4	Hschr16_ctg1_1	JGI	fin	60678	0	100
AC140658.2	RP11-812E19	Hschr16_ctg1_1	JGI	fin	86047	1	100	simple sequence in gap
AC133561.4	RP11-598D12	Hschr16_ctg1_1	JGI	fin	8707	0	99.989
AC136932.4	CTD-2522B17	Hschr16_ctg1_1	JGI	fin
?	CH17-253E23	Hschr16_ctg1_1
GAP	type-3
FP325313.3	CH17-342O10	Hschr16_ctg3	SC	fin	1990	8	95.377	identity < 98%
AC135776.3	CTD-2144E22	Hschr16_ctg3	JGI	fin	131349	27	99.902	>0 gap of 50bp or more, not simple sequence
AC092133.2	RP11-20D16	Hschr16_ctg3	JGI	fin	8901	0	100
AC023824.6	RP11-244B22	Hschr16_ctg3	JGI	fin	70676	11	99.899	simple sequence in gap
AC007353.5	RP11-488I20	Hschr16_ctg3	JGI	fin	14118	1	99.950	simple sequence in gap
AC018558.6	RP11-80F22	Hschr16_ctg3	JGI	fin	6178	0	100
AC092325.2	RP11-14K3	Hschr16_ctg3	JGI	fin	7815	0	99.974
AC106785.3	RP11-352B15	Hschr16_ctg3	JGI	fin	90420	6	99.980	simple sequence in gap
AC116553.2	RP11-43P5	Hschr16_ctg3	JGI	fin	45231	1	100	simple sequence in gap
AC109490.3	RP11-65B9	Hschr16_ctg3	JGI	fin	2000	0	100
FP325343.2	CH17-249L12	Hschr16_ctg3	SC	fin
GAP	CENTROMERE	3000000
GAP	HETEROCHROMATIN	8000000
FP325338.3	CH17-251E23	Hschr16_ctg3_1	SC	act	0	0	0	one or more unfinished sequences; no overlap present
AC106819.3	RP11-696P19	Hschr16_ctg3_1	JGI	fin	7297	0	99.973
AC092368.3	RP11-46D6	Hschr16_ctg3_1	JGI	fin	114893	0	100
AC012186.8	RP11-93O14	Hschr16_ctg3_1	JGI	fin	17960	1	100	simple sequence in gap
AC007225.2	RP11-480G7	Hschr16_ctg3_1	JGI	fin	25562	0	100
AC018845.7	RP11-169E6	Hschr16_ctg3_1	JGI	fin	124713	2	100	simple sequence in gap
AC007338.6	RP11-283C7	Hschr16_ctg3_1	JGI	fin	13506	0	100
AC007494.8	RP11-329J18	Hschr16_ctg3_1	JGI	fin	6502	0	100
AC007533.2	RP11-474B12	Hschr16_ctg3_1	JGI	fin	45732	1	100	simple sequence in gap
AC007599.6	RP11-177N22	Hschr16_ctg3_1	JGI	fin	11570	0	99.983
AC092374.4	RP11-637I8	Hschr16_ctg3_1	JGI	fin	121067	5	99.993	simple sequence in gap
AC141846.3	CTB-55P19	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC147770.1	16A02	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC140542.3	8989147F6	Hschr16_ctg3_1	JGI	fin	28913	1	99.993	simple sequence in gap
AC007857.2	RP11-523L20	Hschr16_ctg3_1	JGI	fin	15456	1	99.993
AC007013.2	LA16c-20A2	Hschr16_ctg3_1	JGI	fin	20903	1	99.986	simple sequence in gap
AC096996.2	RP11-3M1	Hschr16_ctg3_1	JGI	fin	134048	3	99.990	simple sequence in gap
AC007600.6	RP11-264A16	Hschr16_ctg3_1	JGI	fin	1525	0	100
AC023818.5	CTD-2600H12	Hschr16_ctg3_1	JGI	fin	1754	0	100
AC026470.6	RP11-44I10	Hschr16_ctg3_1	JGI	fin	74910	0	99.999
AC023813.6	CTC-527H23	Hschr16_ctg3_1	JGI	fin	2704	1	99.667	simple sequence in gap
AC007611.5	RP11-452G23	Hschr16_ctg3_1	JGI	fin	93087	22	99.906	simple sequence in gap
AC023827.7	RP11-42I10	Hschr16_ctg3_1	JGI	fin	57712	16	99.846	simple sequence in gap
AC007500.7	RP11-545E2	Hschr16_ctg3_1	JGI	fin	25276	8	99.913	simple sequence in gap
AC007502.6	RP11-98C8	Hschr16_ctg3_1	JGI	fin	37056	12	99.846	>0 gap of 25bp or more, not simple sequence
AC044798.7	RP11-22D3	Hschr16_ctg3_1	JGI	fin	51406	5	99.899	simple sequence in gap
AC007614.7	RP11-491F9	Hschr16_ctg3_1	JGI	fin	66933	0	100
AC007861.5	RP11-189E14	Hschr16_ctg3_1	JGI	fin	46307	0	100
AC007607.6	RP11-369H7	Hschr16_ctg3_1	JGI	fin	34198	11	99.848	half-dovetail of >0bp and <=50bp
AC007339.8	RP11-305A7	Hschr16_ctg3_1	JGI	fin	100583	27	99.872	simple sequence in gap
AC027348.8	CTD-2595P9	Hschr16_ctg3_1	JGI	fin	27472	8	99.847	simple sequence in gap
AC007603.5	RP11-305A4	Hschr16_ctg3_1	JGI	fin	24735	11	99.915	simple sequence in gap
AC007610.10	RP11-429P3	Hschr16_ctg3_1	JGI	fin	75800	0	99.997
AC007597.3	RP11-137H10	Hschr16_ctg3_1	JGI	fin	75174	10	99.973	simple sequence in gap
AC023826.6	RP11-380E14	Hschr16_ctg3_1	JGI	fin	104088	1	100	simple sequence in gap
AC007493.7	RP11-21B23	Hschr16_ctg3_1	JGI	fin	8551	0	100
AC007334.8	RP11-147B17	Hschr16_ctg3_1	JGI	fin	119286	6	99.984	simple sequence in gap
AC007608.7	RP11-401P9	Hschr16_ctg3_1	JGI	fin	28980	0	100
AC007728.4	RP11-327F22	Hschr16_ctg3_1	JGI	fin	1597	0	99.875
AC025810.5	CTD-2034I21	Hschr16_ctg3_1	JGI	fin	25390	5	99.819	simple sequence in gap
AC027688.5	RP11-883G14	Hschr16_ctg3_1	JGI	fin	15080	0	100
AC009166.4	?	Hschr16_ctg3_1	JGI	fin	31574	6	99.883	simple sequence in gap
AC137494.1	LA16c-491E3	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC147769.1	16A01	Hschr16_ctg3_1	JGI	fin	1001	0	99.900
AC137527.3	X504C1	Hschr16_ctg3_1	JGI	fin	30388	4	99.921	simple sequence in gap
AC087564.6	RP11-437L7	Hschr16_ctg3_1	JGI	fin	56487	0	100
AC007344.3	RP11-466G2	Hschr16_ctg3_1	JGI	fin	5785	4	99.723	simple sequence in gap
AC084058.6	CTD-2119F7	Hschr16_ctg3_1	JGI	fin	12131	0	99.918
AC109600.2	RP11-7O14	Hschr16_ctg3_1	JGI	fin	104510	0	100
AC023823.7	RP11-163K4	Hschr16_ctg3_1	JGI	fin	28835	2	99.983	simple sequence in gap
AC007489.3	RP11-122K22	Hschr16_ctg3_1	JGI	fin	70728	0	99.980
AC009039.7	RP11-152O14	Hschr16_ctg3_1	JGI	fin	16582	0	100
AC007341.10	RP11-381L15	Hschr16_ctg3_1	JGI	fin	93197	28	99.854	>0 gap of 50bp or more, not simple sequence
AC007333.8	RP11-142G1	Hschr16_ctg3_1	JGI	fin	21655	2	99.995	simple sequence in gap
AC007501.2	RP11-67I13	Hschr16_ctg3_1	JGI	fin	111263	29	99.939	simple sequence in gap
AC007490.7	RP11-132F7	Hschr16_ctg3_1	JGI	fin	21102	7	99.919	simple sequence in gap
AC093514.2	CTD-2517O22	Hschr16_ctg3_1	JGI	fin	126160	37	99.867	simple sequence in gap
AC026462.5	RP11-297L17	Hschr16_ctg3_1	JGI	fin	17956	0	100
AC007340.8	RP11-358O5	Hschr16_ctg3_1	JGI	fin	11245	0	100
AC007346.6	RP11-467J12	Hschr16_ctg3_1	JGI	fin	40490	25	99.884	simple sequence in gap
AC007906.8	RP11-295M3	Hschr16_ctg3_1	JGI	fin	84711	0	99.999
AC079416.4	RP11-454F8	Hschr16_ctg3_1	JGI	fin	108231	4	99.976	simple sequence in gap
AC007345.5	RP11-466N18	Hschr16_ctg3_1	JGI	fin	80596	19	99.924	simple sequence in gap
AC007342.6	RP11-44F14	Hschr16_ctg3_1	JGI	fin	29793	3	99.956	simple sequence in gap
AC007497.6	RP11-36I17	Hschr16_ctg3_1	JGI	fin	22681	2	99.960	simple sequence in gap
AC084795.5	CTD-2007P3	Hschr16_ctg3_1	JGI	fin	89803	17	99.932	simple sequence in gap
AC007909.8	RP11-515G11	Hschr16_ctg3_1	JGI	fin	20695	0	100
AC007496.6	RP11-357N13	Hschr16_ctg3_1	JGI	fin	65966	1	99.995	simple sequence in gap
AC007347.3	RP11-488J11	Hschr16_ctg3_1	JGI	fin	23578	1	99.996	simple sequence in gap
AC007907.3	RP11-324D17	Hschr16_ctg3_1	JGI	fin	6846	1	99.752	simple sequence in gap
AC018553.6	RP11-434E6	Hschr16_ctg3_1	JGI	fin	110391	2	100	simple sequence in gap
AC007343.7	RP11-463J22	Hschr16_ctg3_1	JGI	fin	31606	7	99.946	simple sequence in gap
AC079412.5	CTD-2302M15	Hschr16_ctg3_1	JGI	fin	21161	9	99.792	simple sequence in gap
AC007491.7	?	Hschr16_ctg3_1	JGI	fin	24549	6	99.780	simple sequence in gap
AC106742.3	RP11-1136G4	Hschr16_ctg3_1	JGI	fin	80514	27	99.899	simple sequence in gap
AC108084.4	CTD-2013N18	Hschr16_ctg3_1	JGI	fin	5783	2	99.896	simple sequence in gap
AC106738.3	CTD-3032H12	Hschr16_ctg3_1	JGI	fin	46643	7	99.923	simple sequence in gap
AC109136.1	RP11-629D22	Hschr16_ctg3_1	JGI	fin	24026	4	99.788	simple sequence in gap
AC109462.2	RP11-26L20	Hschr16_ctg3_1	JGI	fin	131156	0	100
AC092722.5	RP11-517M14	Hschr16_ctg3_1	JGI	fin	31383	2	99.955	simple sequence in gap
AC007336.6	RP11-212I21	Hschr16_ctg3_1	JGI	fin	31247	10	99.923	simple sequence in gap
AC026802.9	CTD-2545G24	Hschr16_ctg3_1	JGI	fin	148022	21	99.915	>0 gap of 50bp or more, not simple sequence
AC136621.2	RP11-481F24	Hschr16_ctg3_1	JGI	fin	48533	0	100
AC147362.2	RP11-449J19	Hschr16_ctg3_1	JGI	fin	61158	0	100
AC007335.7	RP11-165M2	Hschr16_ctg3_1	JGI	fin	26197	0	100
AC040168.8	RP11-461O7	Hschr16_ctg3_1	JGI	fin	143963	0	100
AC007495.9	RP11-355E10	Hschr16_ctg3_1	JGI	fin	15101	4	99.788	simple sequence in gap
AC079411.6	CTD-2050B12	Hschr16_ctg3_1	JGI	fin	52262	2	100	simple sequence in gap
AC009102.10	RP11-441F2	Hschr16_ctg3_1	JGI	fin	91020	0	100
AC092140.4	RP11-413H22	Hschr16_ctg3_1	JGI	fin	37033	0	100
AC009155.3	RP11-5A3	Hschr16_ctg3_1	JGI	fin	87041	29	99.871	>0 gap of 50bp or more, not simple sequence
AC026461.11	RP11-249C24	Hschr16_ctg3_1	JGI	fin	67859	21	99.857	simple sequence in gap
AC106779.3	RP11-343H19	Hschr16_ctg3_1	JGI	fin	20368	2	99.985	simple sequence in gap
AC127456.2	CTD-3175N14	Hschr16_ctg3_1	JGI	fin	8949	1	99.944	simple sequence in gap
AC012181.8	RP11-325K4	Hschr16_ctg3_1	JGI	fin	6197	5	99.790	simple sequence in gap
AC023825.8	RP11-322D14	Hschr16_ctg3_1	JGI	fin	113840	32	99.886	simple sequence in gap
AC009090.12	RP11-407G23	Hschr16_ctg3_1	JGI	fin	22883	2	99.974	simple sequence in gap
AC108081.2	CTC-661I16	Hschr16_ctg3_1	JGI	fin	39184	17	99.939	simple sequence in gap
AC009052.8	?	Hschr16_ctg3_1	JGI	fin	152537	49	99.893	>0 gap of 25bp or more, not simple sequence
AC004382.1	?	Hschr16_ctg3_1	TIGR	fin	2784	0	100
AC027349.3	CTD-3083H4	Hschr16_ctg3_1	JGI	fin	18085	8	99.867	half-dovetail of >0bp and <=50bp
AC018552.6	RP11-405F3	Hschr16_ctg3_1	JGI	fin	31120	24	99.753	simple sequence in gap
AC092118.3	CTD-2600O9	Hschr16_ctg3_1	JGI	fin	20569	9	99.820	simple sequence in gap
AC010543.9	RP11-440K14	Hschr16_ctg3_1	JGI	fin	92627	0	100
AC012182.7	RP11-332G1	Hschr16_ctg3_1	JGI	fin	7550	1	99.947	simple sequence in gap
AC026771.6	CTB-134F13	Hschr16_ctg3_1	JGI	fin	47543	7	99.966	simple sequence in gap
AC009107.11	RP11-459F6	Hschr16_ctg3_1	JGI	fin	8595	6	99.802	simple sequence in gap
AC084063.5	RP11-255J12	Hschr16_ctg3_1	JGI	fin	13513	0	100
AC009118.11	RP11-481J2	Hschr16_ctg3_1	JGI	fin	43124	28	99.877	simple sequence in gap
AC010287.9	CTA-331F8	Hschr16_ctg3_1	JGI	fin	82320	26	99.938	simple sequence in gap
AC012183.9	RP11-451N19	Hschr16_ctg3_1	JGI	fin	69117	4	100	simple sequence in gap
AC092378.4	RP11-700H13	Hschr16_ctg3_1	JGI	fin	87455	1	99.999
AC012323.7	RP11-89O14	Hschr16_ctg3_1	JGI	fin	51504	18	99.891	simple sequence in gap
AC106793.3	RP11-410D17	Hschr16_ctg3_1	JGI	fin	47346	0	100
AC092121.3	RP11-102D18	Hschr16_ctg3_1	JGI	fin	32467	0	100
AC009147.9	RP11-55H18	Hschr16_ctg3_1	JGI	fin	55752	2	99.989	simple sequence in gap
AC040163.3	RP11-1M1	Hschr16_ctg3_1	JGI	fin	17334	0	100
AC040171.4	RP11-52D13	Hschr16_ctg3_1	JGI	fin	57580	14	99.948	simple sequence in gap
AC026457.8	RP11-105C20	Hschr16_ctg3_1	JGI	fin	18464	0	100
AC092350.4	RP11-29G3	Hschr16_ctg3_1	JGI	fin	22018	1	100	simple sequence in gap
AC009069.3	RP11-314L21	Hschr16_ctg3_1	JGI	fin	73786	32	99.828	>2 gap of 25bp or more, not simple sequence
AC009094.7	RP11-430C1	Hschr16_ctg3_1	JGI	fin	6199	1	99.871	simple sequence in gap
AC018554.7	RP11-457D20	Hschr16_ctg3_1	JGI	fin	26058	3	99.985	simple sequence in gap
AC009081.8	RP11-354I13	Hschr16_ctg3_1	JGI	fin	60720	0	100
AC018555.5	RP11-486F10	Hschr16_ctg3_1	JGI	fin	27304	0	100
AC009080.8	RP11-341K23	Hschr16_ctg3_1	JGI	fin	84048	1	99.999	simple sequence in gap
AC009156.10	RP11-5G20	Hschr16_ctg3_1	JGI	fin	36128	0	100
AC009169.9	RP11-90K18	Hschr16_ctg3_1	JGI	fin	108993	2	100
AC026473.7	RP11-51O6	Hschr16_ctg3_1	JGI	fin	10802	5	99.806	simple sequence in gap
AC097275.2	RP11-23O7	Hschr16_ctg3_1	JGI	fin	100864	0	100
AC040166.6	RP11-44I4	Hschr16_ctg3_1	JGI	fin	35498	0	100
AC026475.6	RP11-71H23	Hschr16_ctg3_1	JGI	fin	90322	1	100	simple sequence in gap
AC016647.7	RP11-89G14	Hschr16_ctg3_1	JGI	fin	14048	0	100
AC092136.3	RP11-299F9	Hschr16_ctg3_1	JGI	fin	61482	0	100
AC092125.2	RP11-109D24	Hschr16_ctg3_1	JGI	fin	90885	1	100	simple sequence in gap
AC092129.3	RP11-140O8	Hschr16_ctg3_1	JGI	fin	66880	3	99.988	simple sequence in gap
AC012174.5	RP11-157H19	Hschr16_ctg3_1	JGI	fin	68788	6	99.994	simple sequence in gap
AC040161.5	CTC-420A11	Hschr16_ctg3_1	JGI	fin	1816	0	99.890
AC092124.2	RP11-1079H2	Hschr16_ctg3_1	JGI	fin	76102	12	99.928	simple sequence in gap
AC090551.6	RP11-197K24	Hschr16_ctg3_1	JGI	fin	26340	0	100
AC009161.14	RP11-75D3	Hschr16_ctg3_1	JGI	fin	9132	2	100	simple sequence in gap
AC094083.4	CTD-2012B15	Hschr16_ctg3_1	JGI	fin	84950	14	99.962	simple sequence in gap
AC009110.10	RP11-467O15	Hschr16_ctg3_1	JGI	fin	2622	0	100
AC092116.3	CTD-2133M23	Hschr16_ctg3_1	JGI	fin	18404	14	99.788	simple sequence in gap
AC010546.10	RP11-50O21	Hschr16_ctg3_1	JGI	fin	81958	0	100
AC009111.8	RP11-468D1	Hschr16_ctg3_1	JGI	fin	3114	1	99.968	simple sequence in gap
AC040174.5	RP11-96H17	Hschr16_ctg3_1	JGI	fin	97362	25	99.917	>0 gap of 25bp or more, not simple sequence
AC004513.1	?	Hschr16_ctg3_1	TIGR	fin	3843	3	99.844	simple sequence in gap
AC117984.2	CTD-2503H21	Hschr16_ctg3_1	JGI	fin	54776	16	99.865	simple sequence in gap
AC138305.2	RP11-2K6	Hschr16_ctg3_1	JGI	fin	118906	2	99.999	simple sequence in gap
AC012172.7	RP11-148F12	Hschr16_ctg3_1	JGI	fin	17164	0	100
AC009085.5	RP11-368L12	Hschr16_ctg3_1	JGI	fin	82283	33	99.868	simple sequence in gap
AC092126.3	RP11-1114G22	Hschr16_ctg3_1	JGI	fin	64446	0	99.998
AC018846.5	RP11-370P15	Hschr16_ctg3_1	JGI	fin	4684	0	100
AC092337.3	RP11-21L1	Hschr16_ctg3_1	JGI	fin	38079	3	99.992	simple sequence in gap
AC012177.6	RP11-231O22	Hschr16_ctg3_1	JGI	fin	42063	2	99.991	simple sequence in gap
AC093536.4	RP11-744D14	Hschr16_ctg3_1	JGI	fin	32845	0	100
AC012322.8	?	Hschr16_ctg3_1	JGI	fin	106133	3	100
AC009109.9	RP11-467L24	Hschr16_ctg3_1	JGI	fin	5106	0	100
AC092323.3	RP11-133B5	Hschr16_ctg3_1	JGI	fin	143997	7	99.993	simple sequence in gap
AC092131.5	RP11-164F14	Hschr16_ctg3_1	JGI	fin	10516	3	99.715	half-dovetail of >50bp
AC004533.1	?	Hschr16_ctg3_1	TIGR	fin	70763	29	99.853	simple sequence in gap
AC009101.7	RP11-439I14	Hschr16_ctg3_1	JGI	fin	2511	0	100
AC010533.6	RP11-229O3	Hschr16_ctg3_1	JGI	fin	8447	0	100
AC137643.3	RP11-95H3	Hschr16_ctg3_1	JGI	fin	21172	0	100
AC009055.10	RP11-256I9	Hschr16_ctg3_1	JGI	fin	3009	0	100
AC123909.2	RP11-27L11	Hschr16_ctg3_1	JGI	fin	114611	36	99.897	simple sequence in gap
AC009062.8	RP11-298C15	Hschr16_ctg3_1	JGI	fin	39318	19	99.891	simple sequence in gap
AC092138.4	RP11-351A20	Hschr16_ctg3_1	JGI	fin	36799	0	100
AC022164.8	RP11-513N24	Hschr16_ctg3_1	JGI	fin	76584	0	100
AC025281.8	RP11-356O24	Hschr16_ctg3_1	JGI	fin	13171	0	99.992
AC009024.6	RP11-112G1	Hschr16_ctg3_1	JGI	fin	52663	7	99.945	simple sequence in gap
AC009058.10	RP11-292B23	Hschr16_ctg3_1	JGI	fin	9305	0	99.850
AC012325.9	RP11-93H5	Hschr16_ctg3_1	JGI	fin	113652	23	99.924	simple sequence in gap
AC132186.3	CTD-2258A20	Hschr16_ctg3_1	JGI	fin	7438	0	99.960
AC010542.7	RP11-403P17	Hschr16_ctg3_1	JGI	fin	105133	2	100	simple sequence in gap
AC018557.9	RP11-63M22	Hschr16_ctg3_1	JGI	fin	11395	0	100
AC044802.6	RP11-61A14	Hschr16_ctg3_1	JGI	fin	16200	2	99.975	simple sequence in gap
AC009084.9	RP11-361L15	Hschr16_ctg3_1	JGI	fin	37648	0	100
AC074143.5	RP11-5A19	Hschr16_ctg3_1	JGI	fin	55066	3	99.996	simple sequence in gap
AC040160.4	CTC-277H1	Hschr16_ctg3_1	JGI	fin	35227	2	99.997	simple sequence in gap
AC009061.10	RP11-297D21	Hschr16_ctg3_1	JGI	fin	95642	4	99.997	simple sequence in gap
AC027682.10	CTD-2012K14	Hschr16_ctg3_1	JGI	fin	8295	0	100
AC009095.7	?	Hschr16_ctg3_1	JGI	fin	39054	1	100
AC010530.8	RP11-167P11	Hschr16_ctg3_1	JGI	fin	3486	0	100
AC040162.5	CTC-479C5	Hschr16_ctg3_1	JGI	fin	7351	1	99.986	simple sequence in gap
AC130462.3	RP11-67A1	Hschr16_ctg3_1	JGI	fin	23353	2	99.991	simple sequence in gap
AC020978.10	RP11-96D1	Hschr16_ctg3_1	JGI	fin	21215	0	100
AC099521.2	RP11-71L14	Hschr16_ctg3_1	JGI	fin	125793	0	100
AC009162.11	RP11-76H6	Hschr16_ctg3_1	JGI	fin	36623	0	100
AC126773.3	RP11-615I2	Hschr16_ctg3_1	JGI	fin	46746	15	99.917	>0 gap of 25bp or more, not simple sequence
AC099314.3	RP11-354M1	Hschr16_ctg3_1	JGI	fin	114300	1	100	simple sequence in gap
AC009082.7	RP11-354N7	Hschr16_ctg3_1	JGI	fin	24489	0	100
AC009137.8	RP11-521L9	Hschr16_ctg3_1	JGI	fin	75718	9	99.968	simple sequence in gap
AC009027.10	RP11-123C5	Hschr16_ctg3_1	JGI	fin	96295	0	100
AC009131.6	RP11-502K10	Hschr16_ctg3_1	JGI	fin	2355	0	100
AC026474.7	RP11-70O5	Hschr16_ctg3_1	JGI	fin	143646	20	99.983	simple sequence in gap
AC026464.7	RP11-343C2	Hschr16_ctg3_1	JGI	fin	16081	0	100
AC009032.8	RP11-140H17	Hschr16_ctg3_1	JGI	fin	59984	8	99.970	simple sequence in gap
AC012321.8	RP11-311C24	Hschr16_ctg3_1	JGI	fin	2104	0	99.952
AC092115.2	CTD-2033A16	Hschr16_ctg3_1	JGI	fin	18832	9	99.841	simple sequence in gap
AC026468.7	RP11-419C5	Hschr16_ctg3_1	JGI	fin	48226	5	99.990	simple sequence in gap
AC009022.10	RP11-106J23	Hschr16_ctg3_1	JGI	fin	44513	0	99.998
AC009060.7	RP11-296I10	Hschr16_ctg3_1	JGI	fin	29296	0	100
AC093491.3	RP11-410N2	Hschr16_ctg3_1	JGI	fin	132880	10	99.996	simple sequence in gap
AC012184.7	RP11-529K1	Hschr16_ctg3_1	JGI	fin	22846	0	100
AC106804.4	RP11-49C24	Hschr16_ctg3_1	JGI	fin	39657	0	99.987
AC020763.6	RP11-394B2	Hschr16_ctg3_1	JGI	fin	480	0	100
AC027281.10	RP11-424M24	Hschr16_ctg3_1	JGI	fin	10021	0	100
AC138625.1	RP11-23E19	Hschr16_ctg3_1	JGI	fin	2518	0	99.881
AC099495.2	RP11-1145B23	Hschr16_ctg3_1	JGI	fin	48749	5	99.988	simple sequence in gap
AC106736.4	CTD-2520I13	Hschr16_ctg3_1	JGI	fin	5893	0	100
AC010547.9	RP11-510M2	Hschr16_ctg3_1	JGI	fin	38067	8	99.950	simple sequence in gap
AC009097.9	RP11-432I5	Hschr16_ctg3_1	JGI	fin	60660	2	100	simple sequence in gap
AC010653.10	RP11-417N10	Hschr16_ctg3_1	JGI	fin	23290	0	100
AC009127.10	RP11-498D10	Hschr16_ctg3_1	JGI	fin	69849	5	99.990	simple sequence in gap
AC009087.4	RP11-384M15	Hschr16_ctg3_1	JGI	fin	59243	1	99.978	half-dovetail of >50bp
AC004682.1	?	Hschr16_ctg3_1	TIGR	fin	54487	5	99.983	simple sequence in gap
AC009075.7	RP11-328J14	Hschr16_ctg3_1	JGI	fin	12116	1	99.951	simple sequence in gap
AC004158.1	?	Hschr16_ctg3_1	TIGR	fin	20987	5	99.910	simple sequence in gap
AC092289.3	CTD-2305H1	Hschr16_ctg3_1	JGI	fin	79064	0	99.991
AC010748.5	CTD-2532L16	Hschr16_ctg3_1	WUGSC	fin	200	0	100
AC004943.2	RP5-991G20	Hschr16_ctg3_1	WUGSC	fin	6507	3	99.923	simple sequence in gap
AC132068.2	CTD-2326C4	Hschr16_ctg3_1	JGI	fin	126135	45	99.893	simple sequence in gap
AC002044.1	?	Hschr16_ctg3_1	TIGR	fin	42139	19	99.934	>0 gap of 50bp or more, not simple sequence
AC116667.2	RP11-346C20	Hschr16_ctg3_1	JGI	fin	2719	1	99.890	simple sequence in gap
AC140912.2	8888206B9	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC147771.1	16A03	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC137520.4	1411G11	Hschr16_ctg3_1	JGI	fin	5886	1	99.847	simple sequence in gap
AC009033.10	RP11-140I24	Hschr16_ctg3_1	JGI	fin	57683	0	100
AC009104.10	RP11-44L9	Hschr16_ctg3_1	JGI	fin	58331	14	99.906	simple sequence in gap
AC092114.3	CTD-2009A10	Hschr16_ctg3_1	JGI	fin	27740	11	99.870	simple sequence in gap
AC092344.3	RP11-26P10	Hschr16_ctg3_1	JGI	fin	22065	0	100
AC087565.5	RP11-53L24	Hschr16_ctg3_1	JGI	fin	67257	0	100
AC092128.3	RP11-133M24	Hschr16_ctg3_1	JGI	fin	35773	0	100
AC138627.1	RP11-42H13	Hschr16_ctg3_1	JGI	fin	14189	0	100
AC009120.8	?	Hschr16_ctg3_1	JGI	fin	25225	3	99.956	simple sequence in gap
AC009053.7	RP11-252A24	Hschr16_ctg3_1	JGI	fin	88500	0	100
AC009153.10	RP11-572F4	Hschr16_ctg3_1	JGI	fin	19434	10	99.815	simple sequence in gap
AC109599.4	RP11-144N1	Hschr16_ctg3_1	JGI	fin	14944	5	99.920	simple sequence in gap
AC004685.1	?	Hschr16_ctg3_1	TIGR	fin	60635	12	99.967	simple sequence in gap
AC009132.9	RP11-503F24	Hschr16_ctg3_1	JGI	fin	50178	0	100
AC092383.4	RP11-787D11	Hschr16_ctg3_1	JGI	fin	75364	16	99.964	simple sequence in gap
AC099508.3	RP11-252E2	Hschr16_ctg3_1	JGI	fin	69205	0	99.999
AC009078.6	RP11-331F4	Hschr16_ctg3_1	JGI	fin	7528	0	100
AC009054.8	RP11-252K23	Hschr16_ctg3_1	JGI	fin	41397	15	99.913	simple sequence in gap
AC009163.6	RP11-77K12	Hschr16_ctg3_1	JGI	fin	20036	1	100	simple sequence in gap
AC025287.8	RP11-490B18	Hschr16_ctg3_1	JGI	fin	59643	0	100
AC009122.8	RP11-486B22	Hschr16_ctg3_1	JGI	fin	4631	0	100
AC105430.2	RP11-2C15	Hschr16_ctg3_1	JGI	fin	20989	0	100
AC092379.4	RP11-707E24	Hschr16_ctg3_1	JGI	fin	63134	13	99.886	simple sequence in gap
AC099511.5	RP11-293N14	Hschr16_ctg3_1	JGI	fin	17583	3	99.949	simple sequence in gap
AC009046.4	RP11-200H5	Hschr16_ctg3_1	JGI	fin	115960	4	99.999	simple sequence in gap
AC010528.8	RP11-150D5	Hschr16_ctg3_1	JGI	fin	6329	3	99.889	simple sequence in gap
AC106741.3	RP11-105F24	Hschr16_ctg3_1	JGI	fin	29840	0	100
AC108125.4	RP11-58C22	Hschr16_ctg3_1	JGI	fin	40557	3	99.988	simple sequence in gap
AC104151.5	RP11-96P7	Hschr16_ctg3_1	JGI	fin	10055	0	100
AC130470.2	RP11-143P24	Hschr16_ctg3_1	JGI	fin	5129	0	100
AC106729.2	CTD-2003G21	Hschr16_ctg3_1	JGI	fin	35458	14	99.803	>0 gap of 25bp or more, not simple sequence
AC106734.3	CTD-2336H13	Hschr16_ctg3_1	JGI	fin	14908	2	99.933	simple sequence in gap
AC108132.2	RP11-404F5	Hschr16_ctg3_1	JGI	fin	50120	15	99.822	simple sequence in gap
AC106733.3	CTD-2300H10	Hschr16_ctg3_1	JGI	fin	24192	12	99.810	simple sequence in gap
AC009139.8	RP11-538I12	Hschr16_ctg3_1	JGI	fin	96821	2	100	simple sequence in gap
AC010548.10	RP11-518I8	Hschr16_ctg3_1	JGI	fin	11683	0	99.983
AC025284.4	RP11-449J10	Hschr16_ctg3_1	JGI	fin	23975	10	99.712	simple sequence in gap
AC092724.2	RP11-571O6	Hschr16_ctg3_1	JGI	fin	41697	0	100
AC092134.4	RP11-264M12	Hschr16_ctg3_1	JGI	fin	13728	0	100
AC010650.9	RP11-281J9	Hschr16_ctg3_1	JGI	fin	19241	3	99.870	simple sequence in gap
AC079414.6	RP11-358L22	Hschr16_ctg3_1	JGI	fin	85305	0	99.999
AC009044.3	RP11-190D6	Hschr16_ctg3_1	JGI	fin	24762	0	100
AC106743.4	RP11-116D9	Hschr16_ctg3_1	JGI	fin	5405	3	99.870	simple sequence in gap
AC109134.2	CTD-2343L8	Hschr16_ctg3_1	JGI	fin	25662	11	99.638	simple sequence in gap
AC046158.6	RP11-264L1	Hschr16_ctg3_1	JGI	fin	2809	1	99.786	simple sequence in gap
AC009141.7	RP11-543G23	Hschr16_ctg3_1	JGI	fin	111164	2	100	simple sequence in gap
AC136603.3	RP11-133M8	Hschr16_ctg3_1	JGI	fin	13827	5	99.870	simple sequence in gap
AC027279.4	RP11-319G9	Hschr16_ctg3_1	JGI	fin	48161	30	99.691	simple sequence in gap
AC009145.4	RP11-556H2	Hschr16_ctg3_1	JGI	fin	2519	2	99.841	simple sequence in gap
AC092376.3	RP11-679B19	Hschr16_ctg3_1	JGI	fin	7996	0	100
AC084064.6	RP11-467I17	Hschr16_ctg3_1	JGI	fin	4241	0	100
AC009159.12	RP11-70D24	Hschr16_ctg3_1	JGI	fin	961	0	100
AC087188.5	RP11-345M22	Hschr16_ctg3_1	JGI	fin	70082	20	99.799	simple sequence in gap
AC113931.2	CTD-2330P21	Hschr16_ctg3_1	JGI	fin	18412	0	99.967
AC092130.3	RP11-148M9	Hschr16_ctg3_1	JGI	fin	3068	0	100
AC022166.7	RP11-525K10	Hschr16_ctg3_1	JGI	fin	50712	1	100	simple sequence in gap
AC108483.3	RP11-170P24	Hschr16_ctg3_1	JGI	fin	46288	4	99.762	simple sequence in gap
AC105411.1	RP11-354A20	Hschr16_ctg3_1	JGI	fin	32952	0	100
AC108097.3	RP11-109P11	Hschr16_ctg3_1	JGI	fin	51187	16	99.791	simple sequence in gap
AC092332.4	RP11-18F14	Hschr16_ctg3_1	JGI	fin	41340	5	99.944	simple sequence in gap
AC099313.3	CTD-2055G21	Hschr16_ctg3_1	JGI	fin	44981	2	99.969	simple sequence in gap
AC009070.12	RP11-314O13	Hschr16_ctg3_1	JGI	fin	78201	2	100
AC009079.4	RP11-340B7	Hschr16_ctg3_1	JGI	fin	94029	49	99.773	>0 gap of 25bp or more, not simple sequence
AC092718.3	RP11-303E16	Hschr16_ctg3_1	JGI	fin	59053	0	100
AC131888.1	RP11-626G3	Hschr16_ctg3_1	JGI	fin	2155	0	100
AC009148.11	RP11-55K13	Hschr16_ctg3_1	JGI	fin	90751	35	99.819	>0 gap of 25bp or more, not simple sequence
AC092139.5	RP11-391L3	Hschr16_ctg3_1	JGI	fin	74609	19	99.834	simple sequence in gap
AC092135.4	RP11-274A11	Hschr16_ctg3_1	JGI	fin	90257	16	99.928	simple sequence in gap
AC099480.5	CTB-159O23	Hschr16_ctg3_1	JGI	fin	5209	1	99.962	simple sequence in gap
AC099524.5	RP11-960L18	Hschr16_ctg3_1	JGI	fin	110028	1	100	simple sequence in gap
AC098966.3	RP11-465H19	Hschr16_ctg3_1	JGI	fin	22490	10	99.693	simple sequence in gap
AC092142.5	RP11-510J16	Hschr16_ctg3_1	JGI	fin	50347	6	99.921	simple sequence in gap
AC138304.1	CTD-2588J6	Hschr16_ctg3_1	JGI	fin	15874	12	99.647	simple sequence in gap
AC024590.8	RP11-487C14	Hschr16_ctg3_1	JGI	fin	898	0	99.889
AC098803.1	CTD-2285C9	Hschr16_ctg3_1	JGI	fin	1066	0	99.906
AC009117.8	RP11-481E4	Hschr16_ctg3_1	JGI	fin	41319	0	99.998
AC092351.3	RP11-2L4	Hschr16_ctg3_1	JGI	fin	15798	0	100
AC099506.3	RP11-22H5	Hschr16_ctg3_1	JGI	fin	37528	17	99.787	simple sequence in gap
AC009028.3	RP11-131F3	Hschr16_ctg3_1	JGI	fin	69009	9	99.887	simple sequence in gap
AC125793.2	CTD-3253I12	Hschr16_ctg3_1	JGI	fin	4914	0	99.776
AC098804.6	RP11-244P19	Hschr16_ctg3_1	JGI	fin	13467	5	99.577	identity < 99.6%
AC087189.3	RP11-43L5	Hschr16_ctg3_1	JGI	fin	43284	0	100
AC009142.13	RP11-543N12	Hschr16_ctg3_1	JGI	fin	58220	0	100
AC092340.5	RP11-24M10	Hschr16_ctg3_1	JGI	fin	31387	1	100	simple sequence in gap
AC106814.3	RP11-625E3	Hschr16_ctg3_1	JGI	fin	55566	0	100
AC009063.8	RP11-298D21	Hschr16_ctg3_1	JGI	fin	12891	0	100
AC009119.10	RP11-483P21	Hschr16_ctg3_1	JGI	fin	8047	2	99.826	simple sequence in gap
AC040169.7	RP11-505K9	Hschr16_ctg3_1	JGI	fin	15968	0	100
AC009123.7	RP11-486L19	Hschr16_ctg3_1	JGI	fin	88567	39	99.754	simple sequence in gap
AC010551.3	RP11-558A11	Hschr16_ctg3_1	JGI	fin	31415	0	100
AC022165.9	RP11-517C16	Hschr16_ctg3_1	JGI	fin	34133	0	100
AC092145.2	RP11-61F12	Hschr16_ctg3_1	JGI	fin	20404	2	100	simple sequence in gap
AC009116.8	RP11-477D3	Hschr16_ctg3_1	JGI	fin	34547	17	99.835	simple sequence in gap
AC025280.5	RP11-254F19	Hschr16_ctg3_1	JGI	fin	88808	49	99.762	simple sequence in gap
AC092341.5	RP11-260K13	Hschr16_ctg3_1	JGI	fin	73347	0	100
AC026469.8	RP11-442O1	Hschr16_ctg3_1	JGI	fin	16375	6	99.786	simple sequence in gap
AC092275.3	CTC-786C10	Hschr16_ctg3_1	JGI	fin	54089	14	99.893	simple sequence in gap
AC092377.3	RP11-680G10	Hschr16_ctg3_1	JGI	fin	10869	8	99.706	simple sequence in gap
AC133540.2	LA16c-352F7	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC147772.1	16A04	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC137492.2	LA16c-379F6	Hschr16_ctg3_1	JGI	fin	25203	9	99.810	simple sequence in gap
AC092127.3	RP11-118F19	Hschr16_ctg3_1	JGI	fin	12443	1	99.984
AC123908.3	CTD-2542L18	Hschr16_ctg3_1	JGI	fin	78257	49	99.790	simple sequence in gap
AC018695.6	RP11-568J23	Hschr16_ctg3_1	WUGSC	fin	18147	7	99.708	>0 gap of 50bp or more, not simple sequence
AC092723.3	RP11-542M13	Hschr16_ctg3_1	JGI	fin	7654	0	100
AC135012.2	RP11-805I24	Hschr16_ctg3_1	JGI	fin	63471	0	100
AC040170.9	RP11-514D23	Hschr16_ctg3_1	JGI	fin	79181	0	100
AC092327.4	RP11-158I3	Hschr16_ctg3_1	JGI	fin	20353	3	99.887	simple sequence in gap
AC125792.2	CTD-3032L3	Hschr16_ctg3_1	JGI	fin	22388	8	99.812	simple sequence in gap
AC009108.10	RP11-463O9	Hschr16_ctg3_1	JGI	fin	23991	0	100
AC009154.5	RP11-58A18	Hschr16_ctg3_1	JGI	fin	98293	37	99.805	simple sequence in gap
AC130467.2	CTD-2015G9	Hschr16_ctg3_1	JGI	fin	12783	0	99.969
AC093519.3	RP11-107C10	Hschr16_ctg3_1	JGI	fin	29771	4	99.852	simple sequence in gap
AC106745.4	RP11-134D3	Hschr16_ctg3_1	JGI	fin	80848	0	100
AC136285.2	RP11-899L11	Hschr16_ctg3_1	JGI	fin	21734	0	100
AC010531.8	RP11-178L8	Hschr16_ctg3_1	JGI	fin	101297	0	100
AC105429.3	RP11-106D4	Hschr16_ctg3_1	JGI	fin	5152	0	100
AC092720.4	RP11-482M8	Hschr16_ctg3_1	JGI	fin	73944	21	99.886	>0 gap of 50bp or more, not simple sequence
AC010536.8	RP11-278A23	Hschr16_ctg3_1	JGI	fin	7729	2	99.974	simple sequence in gap
AC126696.1	RP4-536B24	Hschr16_ctg3_1	JGI	fin	28959	0	100
AC133539.2	GS1-21A4	Hschr16_ctg3_1	JGI	fin	44294	10	99.953	simple sequence in gap
AC127455.4	CTD-3057O21	Hschr16_ctg3_1	JGI	fin	95688	31	99.810	>2 gap of 25bp or more, not simple sequence
AC134312.3	RP11-863P13	Hschr16_ctg3_1	JGI	fin	74021	0	100
AC138512.4	RP11-93B18	Hschr16_ctg3_1	JGI	fin	1001	0	99.900
AC147773.1	16A05	Hschr16_ctg3_1	JGI	fin	1001	0	100
AC137526.1	LA16c-444G7	Hschr16_ctg3_1	JGI	fin	16981	1	99.876	>0 gap of 25bp or more, not simple sequence
AC140838.3	8484069G6	Hschr16_ctg3_1	JGI	fin	30279	7	99.772	>0 gap of 50bp or more, not simple sequence
AC142208.3	89260C6	Hschr16_ctg3_1	JGI	fin
?	ABC8-43005200N15	Hschr16_ctg3_1
GAP	type-3
?	ABC8-40297500G7	Hschr16_ctg4
AC132804.2	LA16c-336H4	Hschr16_ctg4	JGI	fin	7076	0	99.760	half-dovetail of >0bp and <=50bp
AC135049.2	RP11-142N21	Hschr16_ctg4	JGI	fin	27813	0	100
AC116552.2	RP11-21B21	Hschr16_ctg4	JGI	fin	15574	7	99.827	simple sequence in gap
AC138028.1	RP5-1142A6	Hschr16_ctg4	JGI	fin	11437	1	99.843	simple sequence in gap
AC092384.5	RP11-830F9	Hschr16_ctg4	JGI	fin	19671	4	99.893	>0 gap of 25bp or more, not simple sequence
AC135782.4	CTD-2555A7	Hschr16_ctg4	JGI	fin	2445	1	99.591	identity < 99.6%
AC009113.8	RP11-46C24	Hschr16_ctg4	JGI	fin	8767	5	99.795	simple sequence in gap
AC137932.1	740I5	Hschr16_ctg4	JGI	fin	10952	1	100	simple sequence in gap
AC092120.4	RP1-168P16	Hschr16_ctg4	JGI	fin	16645	1	99.970	simple sequence in gap
AC092123.4	RP11-104N10	Hschr16_ctg4	JGI	fin	54098	0	100
AC010538.9	RP11-368I7	Hschr16_ctg4	JGI	fin	7120	5	99.831	simple sequence in gap
AC005360.1	LA16c-352A12	Hschr16_ctg4	JGI	fin	9652	0	100
AC005567.1	LA16c-431F1	Hschr16_ctg4	JGI	fin	4822	1	99.896	simple sequence in gap
AC092385.4	RP4-597G12	Hschr16_ctg4	JGI	fin	28601	1	99.990
AC092143.4	RP11-566K11	Hschr16_ctg4	JGI	fin	43907	0	100
AC133919.3	RP11-356C4	Hschr16_ctg4	JGI	fin	9016	1	100	simple sequence in gap
AC137933.1	YA11C11	Hschr16_ctg4	JGI	fin	13224	0	100
AC137934.1	YA11C16	Hschr16_ctg4	JGI	fin
GAP	type-3
GAP	TELOMERE	10000

NCBI