NCBI

Find a TPF

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Join Legend: Click on the colored ball in the 'join' column to see alignment details.

• Serious alignment problem, requires review
• Minor alignment problem
• Excellent alignment

• Certificate submitted, not yet approved
• Certificate submitted and approved
• Join not evaluated

Join view for chr 9 (reference)

acc1	clone1	clone1 status	clone1 center	acc2	clone2	clone2 status	clone2 center	align len	perc. id	gaps	join status	comments
AL928970.15	2039	fin	SC	AL449043.16	RP11-143M1	fin	SC	2000	100	0
AL449043.16	RP11-143M1	fin	SC	AL356244.13	RP11-174M15	fin	SC	2000	100	0
AL356244.13	RP11-174M15	fin	SC	AL158832.13	RP11-59O6	fin	SC	1000	99.400	0		identity < 99.6%; alignment length < 2000
AL158832.13	RP11-59O6	fin	SC	AL161725.13	RP11-165F24	fin	SC	100	100	0
AL161725.13	RP11-165F24	fin	SC	AL392089.7	RP11-31F19	fin	SC	100	100	0
AL392089.7	RP11-31F19	fin	SC	AL136979.16	RP11-130C19	fin	SC	100	100	0
AL136979.16	RP11-130C19	fin	SC	AL136365.9	RP11-143M15	fin	SC	100	100	0
AL136365.9	RP11-143M15	fin	SC	AL358976.11	RP11-147I11	fin	SC	100	100	0
AL358976.11	RP11-147I11	fin	SC	AL591474.6	RP11-318K7	fin	SC	2000	100	0
AL591474.6	RP11-318K7	fin	SC	AL356498.10	RP11-341G2	fin	SC	2000	100	0
AL356498.10	RP11-341G2	fin	SC	AL358934.19	RP11-459D20	fin	SC	100	100	0
AL358934.19	RP11-459D20	fin	SC	AL353696.8	RP11-560G8	fin	SC	100	100	0
AL353696.8	RP11-560G8	fin	SC	AL358053.31	RP11-415J4	fin	SC	2000	100	0
AL358053.31	RP11-415J4	fin	SC	AL356284.11	RP11-438E12	fin	SC	2000	100	0
AL356284.11	RP11-438E12	fin	SC	AL353590.14	RP11-420P23	fin	SC	2000	99.950	0
AL353590.14	RP11-420P23	fin	SC	AL591644.14	RP11-443B9	fin	SC	1999	99.900	1		simple sequence in gap
AL591644.14	RP11-443B9	fin	SC	AL359076.16	RP11-264I13	fin	SC	2000	100	0
AL359076.16	RP11-264I13	fin	SC	AL138755.13	RP11-48M17	fin	SC	100	100	0
AL138755.13	RP11-48M17	fin	SC	AL353667.10	RP11-125B21	fin	SC	100	100	0
AL353667.10	RP11-125B21	fin	SC	AL353614.9	RP11-91N2	fin	SC	100	100	0
AL353614.9	RP11-91N2	fin	SC	AL450467.8	RP11-320E16	fin	SC	100	99.000	0		identity < 99.6%
AL450467.8	RP11-320E16	fin	SC	AL354723.17	RP11-526D20	fin	SC	2000	100	0
AL354723.17	RP11-526D20	fin	SC	AL589675.5	RP11-255J3	fin	SC	2000	100	0
AL589675.5	RP11-255J3	fin	SC	AL359077.10	RP11-176B4	fin	SC	2000	100	0
AL359077.10	RP11-176B4	fin	SC	AL133549.11	RP11-32F11	fin	SC	100	100	0
AL133549.11	RP11-32F11	fin	SC	AL354941.10	RP11-62E14	fin	SC	2000	100	0
AL354941.10	RP11-62E14	fin	SC	AL603631.6	RP11-350P8	fin	SC	2000	100	0
AL603631.6	RP11-350P8	fin	SC	AL365202.19	RP11-326A8	fin	SC	2000	99.950	0
AL365202.19	RP11-326A8	fin	SC	AL354977.10	RP11-509J21	fin	SC	2000	100	0
AL354977.10	RP11-509J21	fin	SC	AL353577.22	RP11-661K19	fin	SC	2000	100	0
AL353577.22	RP11-661K19	fin	SC	AL137071.22	RP11-252M18	fin	SC	2000	100	0
AL137071.22	RP11-252M18	fin	SC	AL158012.14	RP11-157A10	fin	SC	100	99.000	0		identity < 99.6%
AL158012.14	RP11-157A10	fin	SC	AL359095.17	RP11-70J12	fin	SC	2000	100	0
AL359095.17	RP11-70J12	fin	SC	AL133283.9	RP11-31M2	fin	SC	2000	99.800	0
AL133283.9	RP11-31M2	fin	SC	AL162419.34	RP11-358M14	fin	SC	2000	100	0
AL162419.34	RP11-358M14	fin	SC	AL162587.20	RP11-280I16	fin	SC	2000	100	0
AL162587.20	RP11-280I16	fin	SC	AL136231.12	RP11-6J24	fin	SC	100	100	0
AL136231.12	RP11-6J24	fin	SC	AL353151.26	RP11-307I14	fin	SC	2000	99.850	1		simple sequence in gap
AL353151.26	RP11-307I14	fin	SC	AL158147.17	RP11-125K10	fin	SC	2000	99.950	0
AL158147.17	RP11-125K10	fin	SC	AL513350.9	RP11-509D8	fin	SC	100	100	0
AL513350.9	RP11-509D8	fin	SC	AL161450.14	RP11-39K24	fin	SC	100	100	0
AL161450.14	RP11-39K24	fin	SC	AL133547.16	RP11-140C18	fin	SC	100	100	0
AL133547.16	RP11-140C18	fin	SC	AL135786.17	RP11-12D24	fin	SC	100	100	0
AL135786.17	RP11-12D24	fin	SC	AL162253.17	RP11-574F11	fin	SC	100	100	0
AL162253.17	RP11-574F11	fin	SC	AL354744.13	RP11-635N21	fin	SC	100	100	0
AL354744.13	RP11-635N21	fin	SC	AL136980.5	RP11-207C16	fin	SC	100	100	0
AL136980.5	RP11-207C16	fin	SC	AL365360.9	RP11-546N22	fin	SC	100	99.000	0		identity < 99.6%
AL365360.9	RP11-546N22	fin	SC	AL353606.12	RP11-165O14	fin	SC	2000	100	0
AL353606.12	RP11-165O14	fin	SC	AL162384.14	RP11-218I7	fin	SC	2000	100	0
AL162384.14	RP11-218I7	fin	SC	AL353741.16	RP11-575C20	fin	SC	100	99.000	0		identity < 99.6%
AL353741.16	RP11-575C20	fin	SC	AL360221.12	RP11-279E1	fin	SC	100	100	0
AL360221.12	RP11-279E1	fin	SC	AL133480.9	RP11-307L3	fin	SC	100	100	0
AL133480.9	RP11-307L3	fin	SC	AL353718.10	RP11-472F14	fin	SC	2000	99.900	1		simple sequence in gap
AL353718.10	RP11-472F14	fin	SC	AL162411.23	RP11-106A1	fin	SC	2000	100	0
AL162411.23	RP11-106A1	fin	SC	AL354707.17	RP11-390F4	fin	SC	2000	100	0
AL354707.17	RP11-390F4	fin	SC	AL445592.15	RP11-660M15	fin	SC	2000	100	0
AL445592.15	RP11-660M15	fin	SC	AL513412.3	RP11-403H13	fin	GBF	40976	100	0
AL513412.3	RP11-403H13	fin	GBF	AL137020.13	RP11-146B14	fin	SC	88063	99.849	18		>0 gap of 50bp or more, not simple sequence
AL137020.13	RP11-146B14	fin	SC	AL161443.13	RP11-169L18	fin	SC	100	100	0
AL161443.13	RP11-169L18	fin	SC	AL513313.6	RP11-244O6	fin	SC	1996	99.950	2		simple sequence in gap
AL513313.6	RP11-244O6	fin	SC	AL157703.14	RP11-79K3	fin	SC	2000	100	0
AL157703.14	RP11-79K3	fin	SC	AL391872.7	RP11-87M1	fin	SC	2000	99.750	1		simple sequence in gap
AL391872.7	RP11-87M1	fin	SC	AL591509.5	RP11-366I21	fin	SC	100	100	0
AL591509.5	RP11-366I21	fin	SC	AL354694.18	RP11-77E14	fin	SC	100	100	0
AL354694.18	RP11-77E14	fin	SC	AL391983.6	RP11-203F16	fin	SC	99	100	0
AL391983.6	RP11-203F16	fin	SC	AL135923.15	RP11-29B9	fin	SC	100	100	0
AL135923.15	RP11-29B9	fin	SC	AL135788.11	RP11-352G21	fin	SC	100	100	0
AL135788.11	RP11-352G21	fin	SC	AL357773.15	RP11-228D23	fin	SC	100	100	0
AL357773.15	RP11-228D23	fin	SC	AL445926.5	RP11-439I6	fin	SC	100	99.000	0		identity < 99.6%
AL445926.5	RP11-439I6	fin	SC	AL590397.7	RP11-376O21	fin	SC	110227	100	0
AL590397.7	RP11-376O21	fin	SC	AL137125.7	RP11-175E13	fin	SC	12416	100	0
AL137125.7	RP11-175E13	fin	SC	AL356584.21	RP11-60C15	fin	SC	100	100	0
AL356584.21	RP11-60C15	fin	SC	AL583805.7	RP11-134K1	fin	SC	2000	100	0
AL583805.7	RP11-134K1	fin	SC	AL451130.8	RP11-10G21	fin	SC	2000	100	0
AL451130.8	RP11-10G21	fin	SC	AL669908.2	RP11-13N19	fin	SC	2000	99.700	1		simple sequence in gap
AL669908.2	RP11-13N19	fin	SC	AL596451.4	RP11-75C9	fin	SC	2000	100	0
AL596451.4	RP11-75C9	fin	SC	AL353638.15	RP11-338L20	fin	SC	2000	100	0
AL353638.15	RP11-338L20	fin	SC	AL591133.7	RP11-12I16	fin	SC	2000	100	0
AL591133.7	RP11-12I16	fin	SC	AL591622.6	RP11-141L16	fin	SC	2000	100	0
AL591622.6	RP11-141L16	fin	SC	AL354722.10	RP11-744O14	fin	SC	1999	99.650	1
AL354722.10	RP11-744O14	fin	SC	AL353733.14	RP11-143N16	fin	SC	100	100	0
AL353733.14	RP11-143N16	fin	SC	AL157826.8	RP11-176P17	fin	SC	100	100	0
AL157826.8	RP11-176P17	fin	SC	AL391864.13	RP11-378H16	fin	SC	100	100	0
AL391864.13	RP11-378H16	fin	SC	AL513422.2	RP11-527D15	fin	GBF	26761	99.866	5		simple sequence in gap
AL513422.2	RP11-527D15	fin	GBF	AL137851.12	RP11-6H18	fin	SC	100620	99.712	61		>0 gap of 50bp or more, not simple sequence
AL137851.12	RP11-6H18	fin	SC	AL441884.5	RP11-19A22	fin	SC	100	100	0
AL441884.5	RP11-19A22	fin	SC	AL390723.21	RP11-19G1	fin	SC	100	100	0
AL390723.21	RP11-19G1	fin	SC	AL133479.11	RP11-299F23	fin	SC	100	100	0
AL133479.11	RP11-299F23	fin	SC	AL590307.3	RP11-321D10	fin	SC	1994	99.549	4		identity < 99.6%
AL590307.3	RP11-321D10	fin	SC	AL137069.15	RP11-167C5	fin	SC	2000	100	0
AL137069.15	RP11-167C5	fin	SC	AL356054.25	RP11-50C21	fin	SC	2000	100	0
AL356054.25	RP11-50C21	fin	SC	AL135790.7	RP11-87N24	fin	SC	2000	99.700	0
AL135790.7	RP11-87N24	fin	SC	AL513024.9	RP11-555B19	fin	SC	2000	100	0
AL513024.9	RP11-555B19	fin	SC	AL161788.13	RP11-421B23	fin	SC	2000	100	0
AL161788.13	RP11-421B23	fin	SC	AL162413.26	RP11-109M17	fin	SC	2000	100	0
AL162413.26	RP11-109M17	fin	SC	AL354952.12	RP11-536I1	fin	SC	2000	100	0
AL354952.12	RP11-536I1	fin	SC	AL354992.7	RP11-293A1	fin	SC	2000	100	0
AL354992.7	RP11-293A1	fin	SC	AL451129.6	RP11-23D5	fin	SC	100	100	0
AL451129.6	RP11-23D5	fin	SC	AL355672.12	RP11-165C19	fin	SC	100	100	0
AL355672.12	RP11-165C19	fin	SC	AL445586.6	RP11-352F21	fin	SC	100	100	0
AL445586.6	RP11-352F21	fin	SC	AL592227.4	RP11-32D4	fin	SC	2000	100	0
AL592227.4	RP11-32D4	fin	SC	AL513332.9	RP11-58B8	fin	SC	2000	99.750	0
AL513332.9	RP11-58B8	fin	SC	AL512596.6	RP11-158N20	fin	SC	2000	100	0
AL512596.6	RP11-158N20	fin	SC	AL353595.9	RP11-81P8	fin	SC	2000	100	0
AL353595.9	RP11-81P8	fin	SC	AL596262.3	RP11-493O12	fin	SC	2000	100	0
AL596262.3	RP11-493O12	fin	SC	AL589678.9	RP11-74C3	fin	SC	2000	100	0
AL589678.9	RP11-74C3	fin	SC	AL357772.15	RP11-71E22	fin	SC	1998	100	1
AL357772.15	RP11-71E22	fin	SC	AL162422.10	RP11-446F13	fin	SC	2000	100	0
AL162422.10	RP11-446F13	fin	SC	AL353605.12	RP11-364M22	fin	SC	1992	99.598	3		identity < 99.6%
AL353605.12	RP11-364M22	fin	SC	AL139114.12	RP11-328C23	fin	SC	100	100	0
AL139114.12	RP11-328C23	fin	SC	AL138753.8	RP11-3L8	fin	SC	100	100	0
AL138753.8	RP11-3L8	fin	SC	AL157828.14	RP11-214I20	fin	SC	100	100	0
AL157828.14	RP11-214I20	fin	SC	AL353711.13	RP11-187K14	fin	SC	1999	99.550	2		identity < 99.6%
AL353711.13	RP11-187K14	fin	SC	AL161449.7	RP11-382H24	fin	SC	2000	100	0
AL161449.7	RP11-382H24	fin	SC	AL353639.10	RP11-664D14	fin	SC	2000	100	0
AL353639.10	RP11-664D14	fin	SC	AL162386.17	RP11-272P10	fin	SC	2000	100	0
AL162386.17	RP11-272P10	fin	SC	AL583785.2	RP11-536O18	fin	GBF	61251	99.925	8		simple sequence in gap
AL583785.2	RP11-536O18	fin	GBF	AL354948.7	RP11-378F20	fin	SC	77819	100	1		simple sequence in gap
AL354948.7	RP11-378F20	fin	SC	AL138750.12	RP11-311A12	fin	SC	2000	100	0
AL138750.12	RP11-311A12	fin	SC	AL353810.9	RP11-261H15	fin	SC	2000	100	0
AL353810.9	RP11-261H15	fin	SC	AL158157.8	RP11-413D24	fin	SC	100	100	0
AL158157.8	RP11-413D24	fin	SC	AL691508.8	RP11-549I12	fin	SC	2000	100	0
AL691508.8	RP11-549I12	fin	SC	AL360089.13	RP11-284P20	fin	SC	2000	100	0
AL360089.13	RP11-284P20	fin	SC	AL441963.7	RP11-280O24	fin	SC	100	99.000	0		identity < 99.6%
AL441963.7	RP11-280O24	fin	SC	AL449443.10	RP11-54D21	fin	SC	100	100	0
AL449443.10	RP11-54D21	fin	SC	AL136366.24	RP11-413C16	fin	SC	100	100	0
AL136366.24	RP11-413C16	fin	SC	AL137017.9	RP11-120J1	fin	SC	100	100	0
AL137017.9	RP11-120J1	fin	SC	AL159169.14	RP11-408A13	fin	SC	100	100	0
AL159169.14	RP11-408A13	fin	SC	AL390732.10	RP11-439N12	fin	SC	100	100	0
AL390732.10	RP11-439N12	fin	SC	AL512643.9	RP11-265B7	fin	SC	2000	100	0
AL512643.9	RP11-265B7	fin	SC	AL354672.27	RP11-476C9	fin	SC	2000	99.950	0
AL354672.27	RP11-476C9	fin	SC	AL592293.7	RP11-54D18	fin	SC	2000	100	0
AL592293.7	RP11-54D18	fin	SC	AL390958.15	RP11-271D19	fin	SC	2000	99.700	1		simple sequence in gap
AL390958.15	RP11-271D19	fin	SC	AL591393.10	RP11-224J22	fin	SC	2000	99.850	0
AL591393.10	RP11-224J22	fin	SC	AL390246.17	RP11-490C5	fin	SC	2000	99.950	0
AL390246.17	RP11-490C5	fin	SC	AL441925.16	RP11-307K19	fin	SC	1996	99.649	1		simple sequence in gap
AL441925.16	RP11-307K19	fin	SC	AL359998.21	RP11-211N10	fin	SC	2000	100	0
AL359998.21	RP11-211N10	fin	SC	AL513423.3	RP11-518K17	fin	GBF	2000	100	0
AL513423.3	RP11-518K17	fin	GBF	AL662788.7	RP11-778P13	fin	SC	2000	99.900	0
AL662788.7	RP11-778P13	fin	SC	AL359877.12	RP11-179A4	fin	SC	2000	100	0
AL359877.12	RP11-179A4	fin	SC	AL592153.6	RP11-58K1	fin	SC	2000	100	0
AL592153.6	RP11-58K1	fin	SC	AL160053.15	RP11-536D16	fin	SC	52287	99.870	8		simple sequence in gap
AL160053.15	RP11-536D16	fin	SC	AL513424.3	RP11-109M15	fin	GBF	30621	100	0
AL513424.3	RP11-109M15	fin	GBF	AL449344.5	RP11-280L17	fin	SC	120880	99.999	0
AL449344.5	RP11-280L17	fin	SC	AL646003.5	RP11-562J19	fin	SC	2000	99.850	0
AL646003.5	RP11-562J19	fin	SC	AL449983.2	RP11-183I6	fin	GBF	1999	99.900	2		alignment length < 2000
AL449983.2	RP11-183I6	fin	GBF	AL450003.2	RP11-62F24	fin	GBF	18676	99.995	0
AL450003.2	RP11-62F24	fin	GBF	AL162418.17	RP11-335H2	fin	SC	2000	100	0
AL162418.17	RP11-335H2	fin	SC	AL450105.17	RP11-519C17	fin	SC	1989	99.799	1		simple sequence in gap
AL450105.17	RP11-519C17	fin	SC	AL358117.11	RP11-325K2	fin	SC	2000	100	1		simple sequence in gap
AL358117.11	RP11-325K2	fin	SC	AL162725.10	RP11-132E11	fin	SC	2000	99.950	0
AL162725.10	RP11-132E11	fin	SC	AL354711.24	RP11-340N12	fin	SC	2000	100	0
AL354711.24	RP11-340N12	fin	SC	AL354738.13	RP11-628O6	fin	SC	2000	99.650	3		simple sequence in gap
AL354738.13	RP11-628O6	fin	SC	AL590377.4	RP11-492A12	fin	SC	2000	100	0
AL590377.4	RP11-492A12	fin	SC	AL133214.12	RP11-163F8	fin	SC	2000	100	0
AL133214.12	RP11-163F8	fin	SC	AL139115.5	RP11-335L15	fin	SC	100	100	0
AL139115.5	RP11-335L15	fin	SC	AL645565.3	RP11-397M22	fin	SC	2000	99.950	2		simple sequence in gap
AL645565.3	RP11-397M22	fin	SC	AL513502.3	RP11-123J20	fin	GBF	94782	100	0
AL513502.3	RP11-123J20	fin	GBF	AL450004.4	RP11-520K3	fin	GBF	92451	99.784	19		simple sequence in gap
AL450004.4	RP11-520K3	fin	GBF	AL513503.2	RP11-297A17	fin	GBF	78417	99.992	3		simple sequence in gap
AL513503.2	RP11-297A17	fin	GBF	AL512664.8	RP11-1A10	fin	SC	68323	100	0
AL512664.8	RP11-1A10	fin	SC	AL445674.12	RP11-477L5	fin	SC	2000	99.950	0
AL445674.12	RP11-477L5	fin	SC	AL442638.3	RP11-570H19	fin	GBF	100	100	0
AL442638.3	RP11-570H19	fin	GBF	AL449963.2	RP11-399M15	fin	GBF	62827	99.986	3		simple sequence in gap
AL449963.2	RP11-399M15	fin	GBF	AL353895.4	RP11-503K16	fin	SC	92463	99.916	16		simple sequence in gap
AL353895.4	RP11-503K16	fin	SC	AL591423.7	RP11-134P18	fin	SC	979	99.898	0		alignment length < 2000
AL591423.7	RP11-134P18	fin	SC	AL158150.14	RP11-220B22	fin	SC	2000	100	0
AL158150.14	RP11-220B22	fin	SC	AL356000.13	RP11-296P7	fin	SC	2000	100	0
AL356000.13	RP11-296P7	fin	SC	AL591206.9	RP11-151J10	fin	SC	2000	100	0
AL591206.9	RP11-151J10	fin	SC	AL161909.20	RP11-146N23	fin	SC	2000	99.850	0
AL161909.20	RP11-146N23	fin	SC	AL391834.8	RP11-513M16	fin	SC	2000	99.950	0
AL391834.8	RP11-513M16	fin	SC	AL158206.8	RP11-363E7	fin	SC	100	100	0
AL158206.8	RP11-363E7	fin	SC	AL133281.12	RP11-252O2	fin	SC	100	100	0
AL133281.12	RP11-252O2	fin	SC	AL158077.15	RP11-471J7	fin	SC	2000	99.900	0
AL158077.15	RP11-471J7	fin	SC	AL591222.2	RP11-378I6	fin	GBF	33410	100	0
AL591222.2	RP11-378I6	fin	GBF	AL731856.14	RP11-647P3	fin	SC	2000	100	0
AL731856.14	RP11-647P3	fin	SC	AL445595.6	RP11-594J14	fin	GBF	2000	99.950	0
AL445595.6	RP11-594J14	fin	GBF	AL512635.8	RP11-15P13	fin	SC	53155	99.930	5		simple sequence in gap
AL512635.8	RP11-15P13	fin	SC	AL513498.2	RP11-336O12	fin	GBF	29126	100	0
AL513498.2	RP11-336O12	fin	GBF	AL163193.5	RP11-73E6	fin	GBF	56286	100	0
AL163193.5	RP11-73E6	fin	GBF	AL627410.9	RP11-518A6	fin	SC	2000	100	0
AL627410.9	RP11-518A6	fin	SC	AL354879.12	RP11-4E23	fin	SC	2000	100	0
AL354879.12	RP11-4E23	fin	SC	AL445624.3	RP11-512L9	fin	GBF	2000	100	0
AL445624.3	RP11-512L9	fin	GBF	AL392163.8	RP11-43M11	fin	SC	73348	100	0
AL392163.8	RP11-43M11	fin	SC	AL662879.5	RP11-279F22	fin	GBF	38470	99.844	12		simple sequence in gap
AL662879.5	RP11-279F22	fin	GBF	AL390882.12	RP11-113D19	fin	SC	69997	100	1		simple sequence in gap
AL390882.12	RP11-113D19	fin	SC	AL512606.6	RP11-1P8	fin	SC	2000	100	0
AL512606.6	RP11-1P8	fin	SC	AL162420.13	RP11-380P16	fin	SC	2000	100	0
AL162420.13	RP11-380P16	fin	SC	AL353732.14	RP11-354P17	fin	SC	2000	99.950	0
AL353732.14	RP11-354P17	fin	SC	AL137022.8	RP11-344A7	fin	SC	100	100	0
AL137022.8	RP11-344A7	fin	SC	AL355679.20	RP11-473O3	fin	SC	2000	100	0
AL355679.20	RP11-473O3	fin	SC	AL359922.10	RP11-70L8	fin	SC	2000	100	0
AL359922.10	RP11-70L8	fin	SC	AL449423.14	RP11-149I2	fin	SC	2000	100	0
AL449423.14	RP11-149I2	fin	SC	AL354709.15	RP11-145E5	fin	SC	2000	100	0
AL354709.15	RP11-145E5	fin	SC	AL157937.21	RP11-408N14	fin	SC	100	100	0
AL157937.21	RP11-408N14	fin	SC	AL161730.9	RP11-441I5	fin	SC	100	100	0
AL161730.9	RP11-441I5	fin	SC	AL583802.5	RP11-11J1	fin	SC	100	100	0
AL583802.5	RP11-11J1	fin	SC	AL603704.9	RP11-512M18	fin	SC	2000	100	0
AL603704.9	RP11-512M18	fin	SC	AC017067.4	RP11-370B11	fin	WUGSC	2000	99.700	0
AC017067.4	RP11-370B11	fin	WUGSC	AL645734.1	RP11-399D6	fin	SC	2000	99.950	0
AL645734.1	RP11-399D6	fin	SC	AL391117.8	RP11-103B9	fin	SC	2000	100	0
AL391117.8	RP11-103B9	fin	SC	AL357615.7	RP11-373D10	fin	GBF	32785	100	0
AL357615.7	RP11-373D10	fin	GBF	AL357614.5	RP11-367B10	fin	GBF	29298	99.782	13		simple sequence in gap
AL357614.5	RP11-367B10	fin	GBF	AL163528.8	RP11-109K15	fin	GBF	55645	99.996	0
AL163528.8	RP11-109K15	fin	GBF	AL442637.4	RP11-495L19	fin	GBF	85183	99.996	5		simple sequence in gap
AL442637.4	RP11-495L19	fin	GBF	AL445623.2	RP11-315I14	fin	GBF	43300	100	0
AL445623.2	RP11-315I14	fin	GBF	AL161628.9	RP11-31K16	fin	SC	73044	100	2		simple sequence in gap
AL161628.9	RP11-31K16	fin	SC	AL365204.11	RP11-321L2	fin	SC	100	100	0
AL365204.11	RP11-321L2	fin	SC	AL513317.11	RP11-393P6	fin	SC	2000	100	0
AL513317.11	RP11-393P6	fin	SC	AL354777.16	RP11-33K8	fin	SC	2000	100	0
AL354777.16	RP11-33K8	fin	SC	AL161724.10	RP11-114E4	fin	SC	100	100	0
AL161724.10	RP11-114E4	fin	SC	AL445241.8	RP11-217O24	fin	SC	2000	100	0
AL445241.8	RP11-217O24	fin	SC	AL441928.12	RP11-509A6	fin	SC	2000	100	0
AL441928.12	RP11-509A6	fin	SC	AL162232.14	RP11-20A20	fin	SC	2000	100	0
AL162232.14	RP11-20A20	fin	SC	AL353811.12	RP11-482I10	fin	SC	2000	99.950	0
AL353811.12	RP11-482I10	fin	SC	AL513333.10	RP11-326P5	fin	SC	100	100	0
AL513333.10	RP11-326P5	fin	SC	AL157830.10	RP11-332M12	fin	SC	100	99.000	0		identity < 99.6%
AL157830.10	RP11-332M12	fin	SC	AL355975.10	RP11-468C2	fin	SC	2000	100	0
AL355975.10	RP11-468C2	fin	SC	AL627260.7	RP11-153E4	fin	SC	2000	100	0
AL627260.7	RP11-153E4	fin	SC	AL353772.14	RP11-465H8	fin	SC	1940	99.536	6		identity < 99.6%
AL353772.14	RP11-465H8	fin	SC	AL158074.18	RP11-330J23	fin	SC	100	100	0
AL158074.18	RP11-330J23	fin	SC	AL353730.13	RP11-55P9	fin	SC	100	100	0
AL353730.13	RP11-55P9	fin	SC	AL590322.4	RP11-536F2	fin	SC	2000	100	0
AL590322.4	RP11-536F2	fin	SC	AL391475.7	RP11-33G16	fin	SC	2000	100	0
AL391475.7	RP11-33G16	fin	SC	AL391649.8	RP11-202E10	fin	SC	100	100	0
AL391649.8	RP11-202E10	fin	SC	AL353753.6	RP11-477G9	fin	SC	100	100	0
AL353753.6	RP11-477G9	fin	SC	AL356791.9	RP11-80I3	fin	SC	100	100	0
AL356791.9	RP11-80I3	fin	SC	AL592226.8	RP11-16P12	fin	SC	1998	99.900	1		simple sequence in gap
AL592226.8	RP11-16P12	fin	SC	AL356156.14	RP11-351L5	fin	SC	2000	99.950	0
AL356156.14	RP11-351L5	fin	SC	AL590078.2	RP11-381K22	fin	GBF	65600	99.913	11		simple sequence in gap
AL590078.2	RP11-381K22	fin	GBF	AL442639.2	RP11-5P15	fin	GBF	39400	100	2
AL442639.2	RP11-5P15	fin	GBF	AL451137.8	RP11-18A15	fin	SC	56107	99.998	0
AL451137.8	RP11-18A15	fin	SC	AL356133.17	RP11-337A23	fin	SC	2000	100	0
AL356133.17	RP11-337A23	fin	SC	AL355432.7	RP11-56F10	fin	GBF	35373	100	0
AL355432.7	RP11-56F10	fin	GBF	AL355433.6	RP11-179D22	fin	GBF	91392	99.905	26		simple sequence in gap
AL355433.6	RP11-179D22	fin	GBF	AL133411.9	RP11-57P14	fin	SC	2000	99.550	1		identity < 99.6%
AL133411.9	RP11-57P14	fin	SC	AL163192.6	RP11-298E2	fin	GBF	2000	100	0
AL163192.6	RP11-298E2	fin	GBF	AL451123.12	RP11-27J8	fin	SC	2000	100	0
AL451123.12	RP11-27J8	fin	SC	AL355585.15	RP11-535I8	fin	SC	2000	99.900	1		simple sequence in gap
AL355585.15	RP11-535I8	fin	SC	AL162396.18	RP11-82P9	fin	SC	2000	100	0
AL162396.18	RP11-82P9	fin	SC	AL360014.30	RP11-575I8	fin	SC	2000	99.500	1		identity < 99.6%
AL360014.30	RP11-575I8	fin	SC	AL353746.6	RP11-438B23	fin	SC	1999	99.850	1		simple sequence in gap
AL353746.6	RP11-438B23	fin	SC	AL451124.13	RP11-20P5	fin	SC	2000	99.900	0
AL451124.13	RP11-20P5	fin	SC	AL596323.10	RP11-83O12	fin	SC	2000	100	0
AL596323.10	RP11-83O12	fin	SC	AL353683.7	RP11-450P11	fin	SC	2000	100	0
AL353683.7	RP11-450P11	fin	SC	AL445526.9	RP11-32I2	fin	SC	100	100	0
AL445526.9	RP11-32I2	fin	SC	AL592206.5	RP11-301H18	fin	SC	2000	100	0
AL592206.5	RP11-301H18	fin	SC	AL450428.6	RP11-264J11	fin	SC	2000	100	0
AL450428.6	RP11-264J11	fin	SC	AL158072.9	RP11-30O14	fin	SC	100	100	0
AL158072.9	RP11-30O14	fin	SC	AL354758.14	RP11-29P12	fin	SC	100	100	0
AL354758.14	RP11-29P12	fin	SC	AL360180.7	RP11-262O11	fin	SC	100	100	0
AL360180.7	RP11-262O11	fin	SC	AL162388.8	RP11-373A6	fin	SC	100	100	0
AL162388.8	RP11-373A6	fin	SC	AL353684.8	RP11-275A14	fin	SC	100	100	0
AL353684.8	RP11-275A14	fin	SC	AL138893.5	RP11-159L16	fin	SC	100	100	0
AL138893.5	RP11-159L16	fin	SC	AL354676.10	RP11-48L13	fin	SC	100	100	0
AL354676.10	RP11-48L13	fin	SC	AL513132.6	RP11-460C6	fin	SC	1597	99.937	0
AL513132.6	RP11-460C6	fin	SC	AL590672.14	CTD-2609B1	fin	SC	2000	99.950	0
AL590672.14	CTD-2609B1	fin	SC	AL451045.14	RP11-549E17	fin	SC	2000	99.700	1		simple sequence in gap
AL451045.14	RP11-549E17	fin	SC	AL392110.12	RP11-29M23	fin	SC	1999	99.850	2		simple sequence in gap
AL392110.12	RP11-29M23	fin	SC	AL390883.13	RP11-230N22	fin	SC	2000	100	0
AL390883.13	RP11-230N22	fin	SC	AL159995.8	RP11-2G13	fin	SC	1999	99.600	1		identity < 99.6%
AL159995.8	RP11-2G13	fin	SC	AL353808.14	RP11-152M16	fin	SC	2000	100	0
AL353808.14	RP11-152M16	fin	SC	AL354704.17	RP11-630H9	fin	SC	2000	100	0
AL354704.17	RP11-630H9	fin	SC	AL390844.12	RP11-255N24	fin	SC	100	100	0
AL390844.12	RP11-255N24	fin	SC	AL590726.9	RP11-441F11	fin	SC	2000	100	0
AL590726.9	RP11-441F11	fin	SC	AL353735.12	RP11-98O11	fin	SC	1980	99.849	2		simple sequence in gap
AL353735.12	RP11-98O11	fin	SC	AL353745.7	RP11-560D2	fin	SC	2000	100	0
AL353745.7	RP11-560D2	fin	SC	AL355582.8	RP11-69L15	fin	SC	2000	99.900	1		simple sequence in gap
AL355582.8	RP11-69L15	fin	SC	AL354854.8	RP11-572H4	fin	SC	2000	100	0
AL354854.8	RP11-572H4	fin	SC	AL353783.14	RP11-271O3	fin	SC	100	100	0
AL353783.14	RP11-271O3	fin	SC	AL162728.20	RP11-206B24	fin	SC	2000	100	0
AL162728.20	RP11-206B24	fin	SC	AL590676.11	RP11-291J9	fin	SC	2000	99.700	0
AL590676.11	RP11-291J9	fin	SC	AL731815.4	RP11-198O10	fin	SC	2000	99.950	0
AL731815.4	RP11-198O10	fin	SC	AL353728.8	RP11-402B2	fin	SC	2000	100	0
AL353728.8	RP11-402B2	fin	SC	AL160407.12	RP11-572G24	fin	SC	2000	100	0
AL160407.12	RP11-572G24	fin	SC	AL161444.18	RP11-312C2	fin	SC	2000	99.950	0
AL161444.18	RP11-312C2	fin	SC	AL451138.5	RP11-152H3	fin	SC	2000	100	0
AL451138.5	RP11-152H3	fin	SC	AL589825.8	RP11-12K1	fin	SC	2000	99.500	0		identity < 99.6%
AL589825.8	RP11-12K1	fin	SC	AL513167.18	RP11-79E21	fin	SC	1997	99.800	1
AL513167.18	RP11-79E21	fin	SC	AL353573.10	RP11-550E18	fin	SC	2000	100	0
AL353573.10	RP11-550E18	fin	SC	AL161783.20	RP11-334P12	fin	SC	2000	100	0
AL161783.20	RP11-334P12	fin	SC	AL353671.6	RP11-205M20	fin	SC	2000	100	0
AL353671.6	RP11-205M20	fin	SC	AL589642.6	RP11-555J4	fin	SC	2000	100	0
AL589642.6	RP11-555J4	fin	SC	AL157884.9	RP11-462B18	fin	SC	2000	100	0
AL157884.9	RP11-462B18	fin	SC	AL353717.13	RP11-562M8	fin	SC	2000	100	0
AL353717.13	RP11-562M8	fin	SC	AL162590.15	RP11-54K16	fin	SC	2000	99.950	1		simple sequence in gap
AL162590.15	RP11-54K16	fin	SC	AL161445.10	RP11-326F20	fin	SC	1994	99.950	2		simple sequence in gap
AL161445.10	RP11-326F20	fin	SC	AL356472.17	RP11-344B24	fin	SC	1995	100	3		simple sequence in gap
AL356472.17	RP11-344B24	fin	SC	AL356218.22	RP11-311H10	fin	SC	2000	100	1		simple sequence in gap
AL356218.22	RP11-311H10	fin	SC	AL139008.10	RP11-255A11	fin	SC	2000	99.850	0
AL139008.10	RP11-255A11	fin	SC	AL356489.14	RP11-384P7	fin	SC	100	100	0
AL356489.14	RP11-384P7	fin	SC	AL358573.25	RP11-133O22	fin	SC	2000	100	0
AL358573.25	RP11-133O22	fin	SC	AL139113.21	RP11-176F3	fin	SC	2000	99.800	0
AL139113.21	RP11-176F3	fin	SC	AL354989.13	RP11-537H15	fin	SC	2000	99.950	1		simple sequence in gap
AL354989.13	RP11-537H15	fin	SC	AL160051.22	RP11-499G9	fin	SC	1000	100	0
AL160051.22	RP11-499G9	fin	SC	AL353662.19	RP11-571F15	fin	SC	2000	99.750	0
AL353662.19	RP11-571F15	fin	SC	AL356494.13	RP11-573M23	fin	SC	2000	100	0
AL356494.13	RP11-573M23	fin	SC	AL160270.19	RP11-296L22	fin	SC	2000	100	0
AL160270.19	RP11-296L22	fin	SC	AL450283.16	RP11-443P11	fin	SC	2000	100	0
AL450283.16	RP11-443P11	fin	SC	AL162231.20	RP11-195F19	fin	SC	1996	99.850	2		simple sequence in gap
AL162231.20	RP11-195F19	fin	SC	AL589645.10	RP11-251H13	fin	SC	1992	99.900	0		half-dovetail of >0bp and <=50bp
AL589645.10	RP11-251H13	fin	SC	AL355377.25	RP11-392A14	fin	SC	1984	99.849	1		simple sequence in gap
AL355377.25	RP11-392A14	fin	SC	AL353795.13	RP11-182N22	fin	SC	2000	100	0
AL353795.13	RP11-182N22	fin	SC	AL354669.12	RP11-201P13	fin	SC	71909	100	0
AL354669.12	RP11-201P13	fin	SC	AL160274.9	RP11-395N21	fin	SC	2000	99.950	0
AL160274.9	RP11-395N21	fin	SC	AL592145.4	RP11-55D5	fin	SC	2000	100	0
AL592145.4	RP11-55D5	fin	SC	AL133476.17	RP11-156G14	fin	SC	2000	100	0
AL133476.17	RP11-156G14	fin	SC	AL357874.13	RP11-331F9	fin	SC	2000	100	0
AL357874.13	RP11-331F9	fin	SC	AL133410.32	RP11-112J3	fin	SC	100	100	0
AL133410.32	RP11-112J3	fin	SC	AL135841.11	RP11-327L3	fin	SC	100	100	0
AL135841.11	RP11-327L3	fin	SC	AL138834.28	RP11-113A10	fin	SC	100	100	0
AL138834.28	RP11-113A10	fin	SC	AL158830.17	RP11-421H8	fin	SC	100	100	0
AL158830.17	RP11-421H8	fin	SC	AL161792.29	RP11-84P7	fin	SC	100	100	0
AL161792.29	RP11-84P7	fin	SC	AL354935.23	RP11-117L14	fin	SC	100	100	0
AL354935.23	RP11-117L14	fin	SC	AL354932.26	RP11-117L21	fin	SC	100	100	0
AL354932.26	RP11-117L21	fin	SC	AL442063.8	RP11-8N6	fin	SC	2000	99.850	2		simple sequence in gap
AL442063.8	RP11-8N6	fin	SC	AL450267.10	RP11-344B23	fin	SC	2000	99.800	0
AL450267.10	RP11-344B23	fin	SC	AL161781.12	RP11-297B17	fin	SC	2000	100	0
AL161781.12	RP11-297B17	fin	SC	AL603912.6	RP11-465M18	fin	SC	2000	99.750	2		simple sequence in gap
AL603912.6	RP11-465M18	fin	SC	AL512604.14	RP11-220I1	fin	SC	2000	100	0
AL512604.14	RP11-220I1	fin	SC	AL358118.11	RP11-558N17	fin	SC	2000	100	0
AL358118.11	RP11-558N17	fin	SC	AL158155.24	RP11-397D12	fin	SC	2000	100	0
AL158155.24	RP11-397D12	fin	SC	AL158156.7	RP11-405L18	fin	SC	2000	99.950	0
AL158156.7	RP11-405L18	fin	SC	AL513165.12	RP11-613M10	fin	SC	2000	100	0
AL513165.12	RP11-613M10	fin	SC	AL591470.12	RP11-263I4	fin	SC	2000	100	0
AL591470.12	RP11-263I4	fin	SC	AL138752.5	RP11-3J10	fin	SC	2000	100	0
AL138752.5	RP11-3J10	fin	SC	AL583849.10	RP11-376F21	fin	SC	2000	99.950	0
AL583849.10	RP11-376F21	fin	SC	AL161448.16	RP11-381H12	fin	SC	2000	99.650	1
AL161448.16	RP11-381H12	fin	SC	AL445986.14	RP11-310F24	fin	SC	2000	100	0
AL445986.14	RP11-310F24	fin	SC	AL135785.10	RP11-113O24	fin	SC	2000	100	0
AL135785.10	RP11-113O24	fin	SC	AL390794.14	RP11-403F21	fin	SC	100	100	0
AL390794.14	RP11-403F21	fin	SC	AL390726.19	RP11-392E22	fin	SC	2000	99.800	0
AL390726.19	RP11-392E22	fin	SC	AL591543.22	RP13-198D9	fin	SC	2000	100	0
AL591543.22	RP13-198D9	fin	SC	AL845311.9	RP11-402N8	fin	SC	2000	99.900	1		simple sequence in gap
AL845311.9	RP11-402N8	fin	SC	AL953883.5	RP11-246P17	fin	SC	2000	100	0
AL953883.5	RP11-246P17	fin	SC	AL353729.17	RP11-290L7	fin	SC	1995	98.396	2		identity < 99.6%; alignment length < 2000
AL353729.17	RP11-290L7	fin	SC	AL162501.11	RP11-138L21	fin	SC	2000	99.950	0
AL162501.11	RP11-138L21	fin	SC	BX005214.7	RP11-347J14	fin	SC	2000	100	0
BX005214.7	RP11-347J14	fin	SC	BX248098.7	CTD-2173L22	fin	SC	16624	99.988	2		simple sequence in gap
BX248098.7	CTD-2173L22	fin	SC	AL590812.9	RP11-381G8	fin	SC	2000	99.850	0
AL162233.14	RP11-292B8	fin	SC	AL353770.18	RP11-395E19	fin	SC	2001	100	0
AL353770.18	RP11-395E19	fin	SC	BX664608.6	RP11-1082I11	fin	SC	12333	99.846	6		simple sequence in gap
BX248112.4	CTD-2340F8	fin	SC	AL953911.4	RP11-242D12	fin	SC	72923	99.851	12		simple sequence in gap
AL596385.12	RP11-95K23	fin	SC	FP700059.2	CH17-296N19	pre	SC	34282	98.670	57		alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 500bp or more, not simple sequence
AL590491.13	RP11-144A16	fin	SC	AL954139.7	RP11-100J16	fin	SC	91310	100	0
AL954139.7	RP11-100J16	fin	SC	BX005209.7	RP11-448C16	fin	SC	2000	100	0
BX005209.7	RP11-448C16	fin	SC	BX296545.5	RP11-45O22	fin	SC	2000	100	0
BX296545.5	RP11-45O22	fin	SC	BX664615.10	RP11-104G3	fin	SC	16252	100	0
BX664615.10	RP11-104G3	fin	SC	CR769767.5	RP11-204M4	fin	SC	41850	100	0
CR769767.5	RP11-204M4	fin	SC	AL772307.16	RP11-416B15	fin	SC	2000	100	0
AL772307.16	RP11-416B15	fin	SC	AL773545.13	RP11-216M21	fin	SC	2000	99.700	1
AL773545.13	RP11-216M21	fin	SC	BX664727.7	RP11-146D12	fin	SC	2000	100	0
BX664727.7	RP11-146D12	fin	SC	AL591471.8	RP11-341A11	fin	SC	2000	100	0
AC129778.5	RP11-1221G12	fin	WUGSC	AL136317.5	RP11-15E1	fin	SC	46731	100	1		simple sequence in gap
AL136317.5	RP11-15E1	fin	SC	AL669942.7	RP11-399F4	fin	SC	71768	100	0
AL669942.7	RP11-399F4	fin	SC	AL513478.10	RP11-327I22	fin	SC	1999	100	1
BX649597.2	RP11-186G6	fin	SC	AL445584.16	RP11-366N18	fin	SC	5345	100	0
AL445584.16	RP11-366N18	fin	SC	BX664735.7	RP11-665E4	fin	SC	110164	100	1		simple sequence in gap
BX664735.7	RP11-665E4	fin	SC	BX649569.5	RP11-204I2	fin	SC	91654	100	0
BX649569.5	RP11-204I2	fin	SC	CR788268.5	RP11-24B13	fin	SC	23962	100	0
CR788268.5	RP11-24B13	fin	SC	FP325345.5	CH17-156I15	fin	SC	0	0	0		not analyzed; no overlap present
FP325345.5	CH17-156I15	fin	SC	CR848007.6	RP11-115C9	fin	SC	143285	98.345	268		>0 gap of 500bp or more, not simple sequence
CR848007.6	RP11-115C9	fin	SC	BX664718.7	RP11-175I6	fin	SC	5350	99.981	0
BX664718.7	RP11-175I6	fin	SC	BX088651.9	RP11-475I24	fin	SC	3133	100	0
BX088651.9	RP11-475I24	fin	SC	AL162415.16	RP11-286O1	fin	SC	1535	100	0
AL935212.11	RP11-160N1	fin	SC	AL391987.15	RP11-374M1	fin	SC	0	0	0		no overlap present
AL391987.15	RP11-374M1	fin	SC	CR769775.11	RP11-449H15	fin	SC	79601	100	1		simple sequence in gap
AL845472.3	RP11-4L24	fin	SC	AL354718.10	RP11-187C18	fin	SC	2000	100	0
AL354718.10	RP11-187C18	fin	SC	AL929000.6	RP11-451N24	fin	SC	2000	100	0
AL929000.6	RP11-451N24	fin	SC	CR387988.4	RP11-266E16	fin	SC	2000	100	0
CR387988.4	RP11-266E16	fin	SC	AL953889.9	RP11-7G23	fin	SC	2000	100	0
CR788264.3	RP11-436G20	fin	SC	AL591926.8	RP11-157L3	fin	SC	2558	100	0
AL591926.8	RP11-157L3	fin	SC	FP326651.12	CH17-322D16	act	SC	96050	98.426	140		alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
FP326651.12	CH17-322D16	act	SC	AL162731.33	RP11-292F9	fin	SC	116956	98.288	190		alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
AL162731.33	RP11-292F9	fin	SC	BX005037.5	RP11-34H11	fin	SC	166633	100	3		simple sequence in gap
AL590399.4	RP11-111F5	fin	SC	BX664725.10	RP11-96J15	fin	SC	2000	100	0
BX664725.10	RP11-96J15	fin	SC	BX005266.6	RP11-211N8	fin	SC	17699	100	0
BX005266.6	RP11-211N8	fin	SC	BX664724.8	RP11-259A5	fin	SC	16061	100	0
AL953854.21	RP11-211P14	fin	SC	FP325309.8	CH17-228P16	act	SC	133955	99.184	140		alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
BX005040.12	RP11-101E5	fin	SC	BX005195.5	RP11-203I2	fin	SC	55367	100	0
BX005195.5	RP11-203I2	fin	SC	AL954685.6	RP11-237M21	fin	SC	70018	100	0
AL954685.6	RP11-237M21	fin	SC	BX664730.2	RP11-118H15	fin	SC	71914	100	0
CR788267.4	RP11-120E5	fin	SC	CR788261.6	RP11-93P10	fin	SC	102247	100	1		simple sequence in gap
CR788261.6	RP11-93P10	fin	SC	FP325317.5	CH17-469D17	act	SC	0	0	0		one or more unfinished sequences; no overlap present
FP325317.5	CH17-469D17	act	SC	AL591441.11	RP11-459O16	fin	SC	48701	99.819	23		alignment exists; one or more unfinished sequences; half-dovetail of >50bp
AL512625.10	RP11-262H14	fin	SC	FP325318.4	CH17-80A12	fin	SC	0	0	0		not analyzed; no overlap present
FP325318.4	CH17-80A12	fin	SC	AL954185.6	RP11-282E4	fin	SC	24668	99.935	5		contained sequence
AL954185.6	RP11-282E4	fin	SC	AL353626.5	RP11-318K12	fin	SC	2000	100	0
AL353626.5	RP11-318K12	fin	SC	FP565210.3	CH17-358L14	pre	SC	1535	99.674	0		alignment exists; one or more unfinished sequences; alignment length < 2000
FP565210.3	CH17-358L14	pre	SC	AL591379.18	RP11-381O7	fin	SC	0	0	0		one or more unfinished sequences; no overlap present
AL845321.4	RP11-236F9	fin	SC	AL354874.14	RP11-38P6	fin	SC	0	0	0		no overlap present
AL354874.14	RP11-38P6	fin	SC	AL355151.11	RP11-288C24	fin	SC	2000	99.900	1		simple sequence in gap
AL355151.11	RP11-288C24	fin	SC	AL627230.15	RP11-12A20	fin	SC	2000	100	0
AL627230.15	RP11-12A20	fin	SC	BX649567.3	RP11-195B21	fin	SC	2000	100	0
FP565585.1	ABC11-47077800C7	pre	SC	AL591438.6	RP11-452D2	fin	SC	771	95.720	1		alignment exists; one or more unfinished sequences; half-dovetail of >50bp; identity < 98%
AL591438.6	RP11-452D2	fin	SC	AL772155.6	RP11-149F8	fin	SC	105130	99.952	13		simple sequence in gap
AL772155.6	RP11-149F8	fin	SC	CR786580.6	RP11-764K9	fin	SC	50310	100	0
FP565583.1	ABC11-49404900M1	pre	SC	AL591385.7	RP11-391M20	fin	SC	0	0	0		one or more unfinished sequences; no overlap present
AL353763.14	RP11-87H9	fin	SC	BX255923.13	RP11-115J7	fin	SC	47169	100	0
FP565169.2	RP11-137I8	pre	SC	CR769776.8	RP11-793G16	fin	SC	0	0	0		one or more unfinished sequences; no overlap present
CR769776.8	RP11-793G16	fin	SC	AL773524.13	RP11-250H24	fin	SC	46349	100	0
AL773524.13	RP11-250H24	fin	SC	AL445665.21	RP11-574E24	fin	SC	2000	100	0
AL445665.21	RP11-574E24	fin	SC	AL359955.25	RP11-460N11	fin	SC	33096	100	0
AL359955.25	RP11-460N11	fin	SC	AC125634.1	RP11-512E23	fin	BCM	18830	100	0
AC125634.1	RP11-512E23	fin	BCM	AL512605.13	RP11-15J10	fin	SC	0	0	0		no overlap present
AL353608.20	RP11-561O23	fin	SC	AL161457.13	RP11-88I18	fin	SC	2000	99.750	0
AL161457.13	RP11-88I18	fin	SC	AL353616.14	RP11-274B18	fin	SC	2000	99.850	0
AL353616.14	RP11-274B18	fin	SC	AL354794.16	RP11-203L2	fin	SC	100	100	0
AL354794.16	RP11-203L2	fin	SC	AL356219.12	RP11-430C15	fin	SC	100	100	0
AL356219.12	RP11-430C15	fin	SC	AL162730.26	RP11-265B8	fin	SC	2000	100	0
AL162730.26	RP11-265B8	fin	SC	AL590238.9	RP13-432J6	fin	SC	2000	100	0
AL590238.9	RP13-432J6	fin	SC	AL358113.21	RP11-16N10	fin	SC	2000	99.900	1		simple sequence in gap
AL358113.21	RP11-16N10	fin	SC	AL355140.25	RP11-548B3	fin	SC	2000	100	0
AL355140.25	RP11-548B3	fin	SC	AL353693.19	RP11-470P21	fin	SC	2000	99.700	0
AL353693.19	RP11-470P21	fin	SC	AL162421.17	RP11-415N7	fin	SC	2000	100	0
AL162421.17	RP11-415N7	fin	SC	AL162412.11	RP11-109D9	fin	SC	2000	100	0
AL162412.11	RP11-109D9	fin	SC	AL603625.11	RP11-385E2	fin	SC	2000	100	0
AL603625.11	RP11-385E2	fin	SC	AL591215.12	RP11-20D12	fin	SC	2000	100	0
AL591215.12	RP11-20D12	fin	SC	AL606666.6	RP11-44J18	fin	SC	2000	100	0
AL606666.6	RP11-44J18	fin	SC	AL392044.7	RP11-195E11	fin	SC	2000	99.800	0
AL392044.7	RP11-195E11	fin	SC	AL158153.10	RP11-373A9	fin	SC	100	100	0
AL158153.10	RP11-373A9	fin	SC	AL162390.9	RP11-386J22	fin	SC	100	99.000	0		identity < 99.6%
AL162390.9	RP11-386J22	fin	SC	AL442645.8	RP11-348N20	fin	SC	2000	100	0
AL442645.8	RP11-348N20	fin	SC	AL358786.21	RP11-286M8	fin	SC	2000	100	0
AL358786.21	RP11-286M8	fin	SC	AL159990.12	RP11-141J10	fin	SC	100	100	0
AL159990.12	RP11-141J10	fin	SC	AL356318.7	RP11-161E22	fin	SC	100	100	0
AL356318.7	RP11-161E22	fin	SC	AL592438.7	RP11-187G6	fin	SC	2000	100	0
AL592438.7	RP11-187G6	fin	SC	AL161913.11	RP11-64P11	fin	SC	2000	100	0
AL161913.11	RP11-64P11	fin	SC	AL160273.9	RP11-366I5	fin	SC	2000	100	0
AL160273.9	RP11-366I5	fin	SC	AL391819.6	RP11-8L13	fin	SC	100	100	0
AL391819.6	RP11-8L13	fin	SC	AL392106.4	RP11-563H8	fin	SC	100	100	0
AL392106.4	RP11-563H8	fin	SC	AL161732.7	RP11-52I12	fin	SC	100	100	0
AL161732.7	RP11-52I12	fin	SC	AL671309.6	RP11-409O11	fin	SC	2000	100	0
AL671309.6	RP11-409O11	fin	SC	AL138751.18	RP11-346E17	fin	SC	2000	100	0
AL138751.18	RP11-346E17	fin	SC	AL583829.7	RP11-61E5	fin	SC	2000	100	0
AL583829.7	RP11-61E5	fin	SC	AL590311.5	RP11-20F16	fin	SC	2000	100	0
AL590311.5	RP11-20F16	fin	SC	AL135924.11	RP11-63P12	fin	SC	2000	100	0
AL135924.11	RP11-63P12	fin	SC	AL445646.11	RP11-217F16	fin	SC	100	100	0
AL445646.11	RP11-217F16	fin	SC	AL596448.5	RP11-313E4	fin	SC	2000	100	0
AL596448.5	RP11-313E4	fin	SC	AL449323.19	RP11-429L21	fin	SC	2000	100	0
AL449323.19	RP11-429L21	fin	SC	AL591662.6	RP11-28P17	fin	SC	2000	100	0
AL591662.6	RP11-28P17	fin	SC	AL590662.5	RP11-528M21	fin	SC	2000	100	0
AL590662.5	RP11-528M21	fin	SC	AL162416.13	RP11-296H15	fin	SC	2000	100	0
AL162416.13	RP11-296H15	fin	SC	AL591031.3	RP11-151D14	fin	SC	1998	100	1		simple sequence in gap
AL591031.3	RP11-151D14	fin	SC	AL359997.8	RP11-71A24	fin	SC	1999	99.900	1		simple sequence in gap
AL359997.8	RP11-71A24	fin	SC	AL449083.23	RP11-434N3	fin	SC	2000	100	1		simple sequence in gap
AL449083.23	RP11-434N3	fin	SC	AL355604.11	RP11-404E6	fin	SC	2000	100	0
AL355604.11	RP11-404E6	fin	SC	AL451127.6	RP11-128I7	fin	SC	100	99.000	0		identity < 99.6%
AL451127.6	RP11-128I7	fin	SC	AL512594.7	RP11-549A6	fin	SC	2000	100	0
AL512594.7	RP11-549A6	fin	SC	AL627324.12	RP11-47F23	fin	SC	1999	99.800	1
AL627324.12	RP11-47F23	fin	SC	AL513124.9	RP11-401G5	fin	SC	2000	100	0
AL513124.9	RP11-401G5	fin	SC	AL512644.10	RP11-726B11	fin	SC	2000	100	0
AL512644.10	RP11-726B11	fin	SC	AL603652.7	RP11-238D24	fin	SC	2000	99.850	0
AL603652.7	RP11-238D24	fin	SC	AL357872.23	RP11-308P9	fin	SC	2000	100	0
AL357872.23	RP11-308P9	fin	SC	AL355152.8	RP11-725M24	fin	SC	2000	99.950	0
AL355152.8	RP11-725M24	fin	SC	AL355674.10	RP11-171A24	fin	SC	100	99.000	0		identity < 99.6%
AL355674.10	RP11-171A24	fin	SC	AL137018.9	RP11-133M9	fin	SC	100	100	0
AL137018.9	RP11-133M9	fin	SC	AL158833.13	RP11-64C9	fin	SC	100	100	0
AL158833.13	RP11-64C9	fin	SC	AL354795.17	RP11-174B4	fin	SC	100	100	0
AL354795.17	RP11-174B4	fin	SC	AL390874.19	RP11-238K16	fin	SC	100	100	0
AL390874.19	RP11-238K16	fin	SC	AL158825.12	RP11-197P3	fin	SC	100	100	0
AL158825.12	RP11-197P3	fin	SC	AL133548.6	RP11-235O14	fin	SC	100	100	0
AL133548.6	RP11-235O14	fin	SC	AL353756.5	RP11-415D9	fin	SC	2000	99.950	1		simple sequence in gap
AL353756.5	RP11-415D9	fin	SC	AL158073.10	RP11-323A7	fin	SC	1999	99.950	2		simple sequence in gap
AL158073.10	RP11-323A7	fin	SC	AL353780.15	RP11-470F18	fin	SC	2000	99.850	0
AL353780.15	RP11-470F18	fin	SC	AL160280.10	RP11-66O21	fin	SC	2000	100	0
AL160280.10	RP11-66O21	fin	SC	AL157883.15	RP11-360J12	fin	SC	1992	99.749	1
AL157883.15	RP11-360J12	fin	SC	AL359253.17	RP11-428L19	fin	SC	2000	99.900	1		simple sequence in gap
AL359253.17	RP11-428L19	fin	SC	AL353607.20	RP11-652B19	fin	SC	2000	100	0
AL353607.20	RP11-652B19	fin	SC	AL589653.9	RP11-468J21	fin	SC	2000	100	0
AL589653.9	RP11-468J21	fin	SC	AL391868.16	RP11-422N19	fin	SC	2000	99.750	0
AL391868.16	RP11-422N19	fin	SC	AL590664.8	RP11-66C24	fin	SC	2000	99.950	0
AL590664.8	RP11-66C24	fin	SC	AL161626.20	RP11-214N16	fin	SC	2000	99.950	0
AL161626.20	RP11-214N16	fin	SC	AL359314.14	RP11-108L4	fin	SC	100	100	0
AL359314.14	RP11-108L4	fin	SC	AL390239.16	RP11-58J3	fin	SC	100	100	0
AL390239.16	RP11-58J3	fin	SC	AL353637.21	RP11-159H20	fin	SC	2000	100	0
AL353637.21	RP11-159H20	fin	SC	AL161789.29	RP11-490H9	fin	SC	2000	100	1		simple sequence in gap
AL161789.29	RP11-490H9	fin	SC	AL353710.7	RP11-470P4	fin	SC	2000	100	0
AL353710.7	RP11-470P4	fin	SC	AL359204.10	RP11-147H13	fin	SC	100	100	0
AL359204.10	RP11-147H13	fin	SC	AL158159.14	RP11-498N2	fin	SC	100	100	0
AL158159.14	RP11-498N2	fin	SC	AL353794.10	RP11-466A17	fin	SC	2000	99.950	0
AL353794.10	RP11-466A17	fin	SC	AL359849.12	RP11-111E2	fin	SC	2000	100	0
AL359849.12	RP11-111E2	fin	SC	AL355535.14	RP11-494N1	fin	SC	2000	100	0
AL355535.14	RP11-494N1	fin	SC	AL160268.14	RP11-141P7	fin	SC	100	100	0
AL160268.14	RP11-141P7	fin	SC	AL160278.24	RP11-574G7	fin	SC	100	100	0
AL160278.24	RP11-574G7	fin	SC	AL354700.12	RP11-545E20	fin	SC	2000	100	0
AL354700.12	RP11-545E20	fin	SC	AL353705.23	RP11-336N8	fin	SC	2000	100	0
AL353705.23	RP11-336N8	fin	SC	AL353594.13	RP11-83O16	fin	SC	100	100	0
AL353594.13	RP11-83O16	fin	SC	AL592448.4	RP13-342J6	fin	SC	2000	99.850	0
AL592448.4	RP13-342J6	fin	SC	AL445684.8	RP11-45D15	fin	SC	2000	99.900	0
AL445684.8	RP11-45D15	fin	SC	AL592221.6	RP11-216F5	fin	SC	2000	99.750	0
AL592221.6	RP11-216F5	fin	SC	AL592047.10	RP11-506C15	fin	SC	2000	100	0
AL592047.10	RP11-506C15	fin	SC	AL354675.20	RP11-217F15	fin	SC	2000	100	0
AL354675.20	RP11-217F15	fin	SC	AL359642.12	RP11-507F17	fin	SC	2000	100	0
AL359642.12	RP11-507F17	fin	SC	AL512634.9	RP11-165H23	fin	SC	2000	100	0
AL512634.9	RP11-165H23	fin	SC	AL160166.10	RP11-159N19	fin	SC	2000	99.900	1
AL160166.10	RP11-159N19	fin	SC	AL450243.13	RP11-567E16	fin	SC	100	100	0
AL450243.13	RP11-567E16	fin	SC	AL358975.8	RP11-375O18	fin	SC	100	100	0
AL358975.8	RP11-375O18	fin	SC	AL445252.13	RP11-362L2	fin	SC	2001	99.950	0
AL445252.13	RP11-362L2	fin	SC	AL353813.12	RP11-79D8	fin	SC	2000	100	0
AL353813.12	RP11-79D8	fin	SC	AL161912.15	RP11-403N16	fin	SC	100	100	0
AL161912.15	RP11-403N16	fin	SC	AL161782.14	RP11-327L9	fin	SC	1996	99.800	1		simple sequence in gap
AL161782.14	RP11-327L9	fin	SC	AL160168.11	RP11-394O9	fin	SC	2000	100	0
AL160168.11	RP11-394O9	fin	SC	AL161780.8	RP11-187K16	fin	SC	100	100	0
AL161780.8	RP11-187K16	fin	SC	AL354937.12	RP11-50K12	fin	SC	100	100	0
AL354937.12	RP11-50K12	fin	SC	AL390788.15	RP11-384P5	fin	SC	2000	100	0
AL390788.15	RP11-384P5	fin	SC	AL160267.17	RP11-117O7	fin	SC	2000	100	0
AL160267.17	RP11-117O7	fin	SC	AL353707.14	RP11-553J6	fin	SC	100	100	0
AL353707.14	RP11-553J6	fin	SC	AL138749.13	RP11-289F5	fin	SC	100	100	0
AL138749.13	RP11-289F5	fin	SC	AL354682.22	RP11-282L14	fin	SC	100	100	0
AL354682.22	RP11-282L14	fin	SC	AL353666.11	RP11-363O16	fin	SC	2000	99.850	0
AL353666.11	RP11-363O16	fin	SC	AL445672.15	RP11-66D1	fin	SC	2000	99.800	0
AL445672.15	RP11-66D1	fin	SC	AL162397.14	RP11-86C4	fin	SC	2000	100	0
AL162397.14	RP11-86C4	fin	SC	AL161727.15	RP11-232A1	fin	SC	2000	100	0
AL161727.15	RP11-232A1	fin	SC	AL353682.11	RP11-203D19	fin	SC	100	100	0
AL353682.11	RP11-203D19	fin	SC	AL365190.16	RP11-512H14	fin	SC	2000	99.950	0
AL365190.16	RP11-512H14	fin	SC	AL591368.6	RP11-154D17	fin	SC	1999	99.750	1		simple sequence in gap
AL591368.6	RP11-154D17	fin	SC	AL158154.28	RP11-383M4	fin	SC	2000	100	0
AL158154.28	RP11-383M4	fin	SC	AL355985.18	RP11-98O17	fin	SC	2000	100	0
AL355985.18	RP11-98O17	fin	SC	AL158047.9	RP11-388B24	fin	SC	2000	100	0
AL158047.9	RP11-388B24	fin	SC	AL357032.13	RP11-432M2	fin	SC	2000	99.950	0
AL357032.13	RP11-432M2	fin	SC	AL162726.16	RP11-15B24	fin	SC	2000	99.850	0
AL162726.16	RP11-15B24	fin	SC	AL356490.14	RP11-333B6	fin	SC	2000	100	0
AL356490.14	RP11-333B6	fin	SC	AL353774.11	RP11-267O11	fin	SC	2000	100	0
AL353774.11	RP11-267O11	fin	SC	AL133391.5	RP11-22C13	fin	SC	2000	99.700	0
AL133391.5	RP11-22C13	fin	SC	AL359202.16	RP11-541F16	fin	SC	100	100	0
AL359202.16	RP11-541F16	fin	SC	AL499602.6	RP11-158H18	fin	SC	2000	99.950	0
AL499602.6	RP11-158H18	fin	SC	AL671136.3	RP11-434D13	fin	SC	2000	100	0
AL671136.3	RP11-434D13	fin	SC	AL137847.12	RP11-439K3	fin	SC	2000	100	0
AL137847.12	RP11-439K3	fin	SC	AL161786.12	RP11-344L17	fin	SC	2000	100	0
AL161786.12	RP11-344L17	fin	SC	AL353641.9	RP11-142P12	fin	SC	2000	100	0
AL353641.9	RP11-142P12	fin	SC	AL450026.10	RP11-439A18	fin	SC	2000	100	0
AL450026.10	RP11-439A18	fin	SC	AL354920.21	RP11-522I20	fin	SC	100	100	0
AL354920.21	RP11-522I20	fin	SC	AL662787.6	RP11-162J2	fin	SC	2000	100	0
AL662787.6	RP11-162J2	fin	SC	AL354733.15	RP11-575L7	fin	SC	2000	99.850	0
AL354733.15	RP11-575L7	fin	SC	AL732446.4	RP11-346I8	fin	SC	2000	99.850	0
AL732446.4	RP11-346I8	fin	SC	AL390838.26	RP11-158D2	fin	SC	2000	100	0
AL390838.26	RP11-158D2	fin	SC	AL356134.14	RP11-380F14	fin	SC	2000	99.950	0
AL356134.14	RP11-380F14	fin	SC	AL353787.21	RP11-667H17	fin	SC	2000	100	0
AL353787.21	RP11-667H17	fin	SC	AL157886.13	RP11-59M22	fin	SC	2000	99.950	0
AL157886.13	RP11-59M22	fin	SC	AL354692.23	RP11-361M4	fin	SC	2000	100	0
AL354692.23	RP11-361M4	fin	SC	AL390777.13	RP11-301F14	fin	SC	1999	99.850	2		simple sequence in gap
AL390777.13	RP11-301F14	fin	SC	AL596132.7	RP11-30A1	fin	SC	2000	99.750	2		simple sequence in gap
AL596132.7	RP11-30A1	fin	SC	AL445532.8	RP11-263K15	fin	SC	2000	99.950	0
AL445532.8	RP11-263K15	fin	SC	AL354897.11	RP11-323N23	fin	SC	2000	100	0
AL354897.11	RP11-323N23	fin	SC	AL159991.14	RP11-14C18	fin	SC	2007	100	0
AL159991.14	RP11-14C18	fin	SC	AL583827.7	RP11-172F7	fin	SC	2000	100	0
AL583827.7	RP11-172F7	fin	SC	AL451132.9	RP11-7N10	fin	SC	2000	99.900	0
AL451132.9	RP11-7N10	fin	SC	AL451131.5	RP11-30C23	fin	SC	2000	100	0
AL451131.5	RP11-30C23	fin	SC	AL157882.5	RP11-202I11	fin	SC	100	100	0
AL157882.5	RP11-202I11	fin	SC	AL353743.22	RP11-213G2	fin	SC	100	100	0
AL353743.22	RP11-213G2	fin	SC	AL161453.11	RP11-65C15	fin	SC	2000	99.950	0
AL161453.11	RP11-65C15	fin	SC	AL161447.20	RP11-379P1	fin	SC	2000	100	0
AL161447.20	RP11-379P1	fin	SC	AL450106.11	RP11-280P22	fin	SC	1998	100	1		simple sequence in gap
AL450106.11	RP11-280P22	fin	SC	AL137849.13	RP11-507D14	fin	SC	2000	100	0
AL137849.13	RP11-507D14	fin	SC	AL353678.11	RP11-229M1	fin	SC	100	100	0
AL353678.11	RP11-229M1	fin	SC	AL158828.14	RP11-359J6	fin	SC	100	100	0
AL158828.14	RP11-359J6	fin	SC	AL353613.10	RP11-395D3	fin	SC	100	100	0
AL353613.10	RP11-395D3	fin	SC	AL159996.7	RP11-401F12	fin	SC	100	100	0
AL159996.7	RP11-401F12	fin	SC	AL158149.14	RP11-208G24	fin	SC	2000	100	0
AL158149.14	RP11-208G24	fin	SC	AL513318.8	RP11-276H19	fin	SC	2000	100	0
AL513318.8	RP11-276H19	fin	SC	AL158205.12	RP11-177F4	fin	SC	2000	100	0
AL158205.12	RP11-177F4	fin	SC	AL136367.10	RP11-58O2	fin	SC	2000	99.950	0
AL136367.10	RP11-58O2	fin	SC	AL353752.6	RP11-497K15	fin	SC	2000	100	0
AL353752.6	RP11-497K15	fin	SC	AL161787.13	RP11-40C6	fin	SC	2000	100	0
AL161787.13	RP11-40C6	fin	SC	AL591852.10	RP11-249H20	fin	SC	2000	100	0
AL591852.10	RP11-249H20	fin	SC	AL160279.21	RP11-65B23	fin	SC	1755	100	0
AL160279.21	RP11-65B23	fin	SC	AL772337.17	21GA2	fin	SC	2000	99.950	0
AL772337.17	21GA2	fin	SC	AL353572.13	RP11-350E12	fin	SC	2000	99.800	0
AL353572.13	RP11-350E12	fin	SC	AL353726.22	RP11-345K9	fin	SC	2000	100	0
AL353726.22	RP11-345K9	fin	SC	AL451142.7	RP11-1E11	fin	SC	1996	99.349	2		identity < 99.6%
AL451142.7	RP11-1E11	fin	SC	AL158076.20	RP11-350G13	fin	SC	100	100	0
AL158076.20	RP11-350G13	fin	SC	AL353748.13	RP11-317B17	fin	SC	2000	100	0
AL353748.13	RP11-317B17	fin	SC	AL162729.8	RP11-215O15	fin	SC	100	100	0
AL162729.8	RP11-215O15	fin	SC	AL592486.9	RP13-60M5	fin	SC	1996	100	1		simple sequence in gap
AL592486.9	RP13-60M5	fin	SC	BX537321.14	678B8	fin	SC	2000	100	0
BX537321.14	678B8	fin	SC	AL390791.15	RP11-204A14	fin	SC	1982	99.445	2		identity < 99.6%
AL390791.15	RP11-204A14	fin	SC	AL512591.6	RP11-176L21	fin	SC	2000	99.850	0
AL512591.6	RP11-176L21	fin	SC	AL772202.14	RP11-791O21	fin	SC	1996	99.749	1
AL772202.14	RP11-791O21	fin	SC	AL353150.25	RP11-82L18	fin	SC	2000	99.800	0
AL353150.25	RP11-82L18	fin	SC	AL160054.14	RP11-8C21	fin	SC	2000	100	0
AL160054.14	RP11-8C21	fin	SC	BX000356.6	RP11-89K14	fin	SC	2000	100	0
BX000356.6	RP11-89K14	fin	SC	AL929575.24	68G7	fin	SC	2000	100	0
AL929575.24	68G7	fin	SC	AL590233.23	RP13-93L13	fin	SC	2000	100	0
AL590233.23	RP13-93L13	fin	SC	AL161910.19	RP11-260L6	fin	SC	2000	99.950	0
AL161910.19	RP11-260L6	fin	SC	AL606807.34	RP11-316P17	fin	SC	2000	100	0
FP565589.1	ABC8-41088700H5	pre	SC	BX470209.3	RP5-1050E16	fin	SC	10713	99.888	7		alignment exists; one or more unfinished sequences; half-dovetail of >50bp
BX470209.3	RP5-1050E16	fin	SC	FP671130.1	ABC10-44539500D13	pre	SC	2847	99.930	1		alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
FP671131.1	ABC10-44560800J4	pre	SC	AL451122.7	RP11-8B23	fin	SC	15414	99.955	0		alignment exists; one or more unfinished sequences
AL451122.7	RP11-8B23	fin	SC	AL161629.10	RP11-406A20	fin	SC	2000	99.950	0
AL161629.10	RP11-406A20	fin	SC	AL353649.12	RP11-30P16	fin	SC	100	100	0
AL353649.12	RP11-30P16	fin	SC	AL389888.8	RP11-389K14	fin	SC	100	100	0
AL389888.8	RP11-389K14	fin	SC	AL161632.21	RP11-85P23	fin	SC	100	100	0
AL161632.21	RP11-85P23	fin	SC	AL354853.12	RP11-555F9	fin	SC	100	100	0
AL354853.12	RP11-555F9	fin	SC	AL353619.9	RP11-563G12	fin	SC	2000	100	0
AL353619.9	RP11-563G12	fin	SC	AL446024.12	RP11-61N16	fin	SC	2000	99.950	0
AL446024.12	RP11-61N16	fin	SC	AL354862.12	RP11-83L6	fin	SC	2000	100	1
AL354862.12	RP11-83L6	fin	SC	AL162585.15	RP11-148I22	fin	SC	100	100	0		alignment length < 2000
AL162585.15	RP11-148I22	fin	SC	AL355607.10	RP11-367F23	fin	SC	2000	100	0
AL355607.10	RP11-367F23	fin	SC	AL158071.23	RP11-305L7	fin	SC	2000	100	0
AL158071.23	RP11-305L7	fin	SC	AL513353.7	RP11-309N12	fin	SC	2000	100	0
AL513353.7	RP11-309N12	fin	SC	AL353645.16	RP11-446A5	fin	SC	2000	99.950	0
AL353645.16	RP11-446A5	fin	SC	AL353764.9	RP11-440G5	fin	SC	2000	100	0
AL353764.9	RP11-440G5	fin	SC	AL159999.15	RP11-8I8	fin	SC	100	100	0
AL159999.15	RP11-8I8	fin	SC	AL591214.8	RP11-18I23	fin	SC	2000	100	0
AL591214.8	RP11-18I23	fin	SC	AL928802.7	RP13-338G2	fin	SC	1995	99.850	2		simple sequence in gap
AL928802.7	RP13-338G2	fin	SC	AL583841.16	RP11-556L2	fin	SC	2000	99.900	1		simple sequence in gap
AL583841.16	RP11-556L2	fin	SC	AL391219.12	RP11-118F2	fin	SC	2000	100	0
AL391219.12	RP11-118F2	fin	SC	AL354751.7	RP11-100G15	fin	SC	2000	100	0
AL354751.7	RP11-100G15	fin	SC	AL136097.10	RP11-62C3	fin	SC	100	100	0
AL136097.10	RP11-62C3	fin	SC	AL137848.5	RP11-77D6	fin	SC	1985	99.899	1		simple sequence in gap
AL137848.5	RP11-77D6	fin	SC	AL157827.17	RP11-19J3	fin	SC	29226	100	0
AL157827.17	RP11-19J3	fin	SC	AL137074.17	RP11-476B13	fin	SC	100	100	0
AL137074.17	RP11-476B13	fin	SC	AL136981.22	RP11-526D8	fin	SC	100	100	0
AL136981.22	RP11-526D8	fin	SC	AL389924.17	RP11-544N10	fin	SC	2000	100	0
AL389924.17	RP11-544N10	fin	SC	AL451065.13	RP11-274J16	fin	SC	2000	100	0
AL451065.13	RP11-274J16	fin	SC	AL390760.25	RP11-370F5	fin	SC	45730	100	0
AL390760.25	RP11-370F5	fin	SC	AL354991.11	RP11-480F4	fin	SC	2000	100	0
AL354991.11	RP11-480F4	fin	SC	AL583839.12	RP11-165J3	fin	SC	2000	100	0
AL583839.12	RP11-165J3	fin	SC	AL353629.22	RP11-30L4	fin	SC	2000	100	0
AL353629.22	RP11-30L4	fin	SC	AL359181.28	RP11-392N11	fin	SC	1999	99.800	2		simple sequence in gap
AL359181.28	RP11-392N11	fin	SC	AL442224.17	RP11-53B5	fin	SC	2000	99.750	0
AL442224.17	RP11-53B5	fin	SC	AL357073.19	RP11-231K24	fin	SC	2000	100	0
AL357073.19	RP11-231K24	fin	SC	AL360020.15	RP11-490F3	fin	SC	2000	100	0
AL360020.15	RP11-490F3	fin	SC	AL158152.18	RP11-2B6	fin	SC	2000	99.950	1		simple sequence in gap
AL158152.18	RP11-2B6	fin	SC	AL691447.18	RP11-307E17	fin	SC	3368	99.911	2		simple sequence in gap
AL691447.18	RP11-307E17	fin	SC	AL358232.19	RP11-533K9	fin	SC	11958	99.816	11		simple sequence in gap
AL358232.19	RP11-533K9	fin	SC	AL161728.25	RP11-342C23	fin	SC	1995	99.148	4		half-dovetail of >0bp and <=50bp; identity < 99.6%
AL161728.25	RP11-342C23	fin	SC	AL157936.12	RP11-279I21	fin	SC	2000	100	0
AL157936.12	RP11-279I21	fin	SC	AL807757.9	RP11-49O14	fin	SC	2000	99.900	0
AL807757.9	RP11-49O14	fin	SC	AL353768.28	RP11-54O15	fin	SC	2000	100	0
AL353768.28	RP11-54O15	fin	SC	AL354893.14	RP11-80I15	fin	SC	2000	100	0
AL354893.14	RP11-80I15	fin	SC	AL157384.8	RP11-173G21	fin	SC	100	100	0
AL157384.8	RP11-173G21	fin	SC	AL446023.12	RP11-346O18	fin	SC	1998	100	1		simple sequence in gap
AL446023.12	RP11-346O18	fin	SC	AL161729.27	RP11-435O5	fin	SC	2000	100	0
AL161729.27	RP11-435O5	fin	SC	AL929564.7	RP11-426M7	fin	SC	2000	99.950	0
AL929564.7	RP11-426M7	fin	SC	BX322800.3	RP11-762K23	fin	SC	2000	100	0
BX322800.3	RP11-762K23	fin	SC	AL392185.10	RP11-332M4	fin	SC	2000	100	0
AL392185.10	RP11-332M4	fin	SC	AL355536.13	RP11-160D19	fin	SC	100	100	0
AL355536.13	RP11-160D19	fin	SC	AL354861.11	RP11-180I4	fin	SC	100	100	0
AL354861.11	RP11-180I4	fin	SC	AL161454.10	RP11-72B4	fin	SC	2000	99.950	0
AL161454.10	RP11-72B4	fin	SC	AL159167.23	RP11-346B7	fin	SC	2000	100	0
AL159167.23	RP11-346B7	fin	SC	AL449403.11	RP11-569G13	fin	SC	2000	100	0
AL449403.11	RP11-569G13	fin	SC	AL138754.13	RP11-115O23	fin	SC	2000	100	0
AL138754.13	RP11-115O23	fin	SC	AL160269.14	RP11-240L7	fin	SC	2000	99.900	1		simple sequence in gap
AL160269.14	RP11-240L7	fin	SC	AL133477.16	RP11-172F4	fin	SC	100	100	0
AL133477.16	RP11-172F4	fin	SC	AL353578.18	RP11-392G7	fin	SC	2000	100	0
AL353578.18	RP11-392G7	fin	SC	AL589843.9	RP11-535M15	fin	SC	2000	100	0
AL589843.9	RP11-535M15	fin	SC	AL158827.27	RP11-330M2	fin	SC	2000	100	0
AL158827.27	RP11-330M2	fin	SC	AL445670.19	RP11-520B13	fin	SC	2000	100	0
AL445670.19	RP11-520B13	fin	SC	AL590705.9	RP11-498P14	fin	SC	2000	100	0
AL590705.9	RP11-498P14	fin	SC	AL512590.2	RP11-23J9	fin	SC	2000	99.750	0
AL512590.2	RP11-23J9	fin	SC	AL449464.12	RP11-508D10	fin	SC	2000	100	0
AL449464.12	RP11-508D10	fin	SC	AL162385.16	RP11-244N9	fin	SC	2000	100	0
AL162385.16	RP11-244N9	fin	SC	AL445531.10	RP11-546O6	fin	SC	100	100	0
AL445531.10	RP11-546O6	fin	SC	AL499604.9	RP11-23B15	fin	SC	100	100	0
AL499604.9	RP11-23B15	fin	SC	AL354726.17	RP11-535C21	fin	SC	2000	100	0
AL354726.17	RP11-535C21	fin	SC	AL137073.13	RP11-404F11	fin	SC	2000	100	0
AL137073.13	RP11-404F11	fin	SC	AL360081.6	RP11-270F18	fin	SC	2000	100	0
AL360081.6	RP11-270F18	fin	SC	AL591502.10	RP11-199C17	fin	SC	2000	100	0
AL591502.10	RP11-199C17	fin	SC	AL356282.13	RP11-303E19	fin	SC	2000	100	0
AL356282.13	RP11-303E19	fin	SC	AL445495.5	RP11-349P17	fin	SC	2000	99.750	1		simple sequence in gap
AL445495.5	RP11-349P17	fin	SC	AL353782.23	RP11-207C11	fin	SC	2000	100	0
AL353782.23	RP11-207C11	fin	SC	AL807776.1	RP11-105G5	fin	SC	1996	100	2		simple sequence in gap
AL807776.1	RP11-105G5	fin	SC	AL136084.11	RP11-92C4	fin	SC	2000	100	0
AL136084.11	RP11-92C4	fin	SC	AL354923.12	RP11-192E23	fin	SC	100	100	0
AL354923.12	RP11-192E23	fin	SC	AL162427.24	RP11-96L7	fin	SC	2000	100	0
AL162427.24	RP11-96L7	fin	SC	AL137067.7	RP11-13B9	fin	SC	1977	100	2		simple sequence in gap
AL137067.7	RP11-13B9	fin	SC	AL589846.5	RP11-199O16	fin	SC	2000	100	0
AL589846.5	RP11-199O16	fin	SC	AL162394.14	RP11-547C13	fin	SC	1998	99.950	1		simple sequence in gap
AL162394.14	RP11-547C13	fin	SC	AL138835.9	RP11-554F20	fin	SC	2000	100	0
AL138835.9	RP11-554F20	fin	SC	AL359710.15	RP11-30L7	fin	SC	100	100	0
AL359710.15	RP11-30L7	fin	SC	AL358937.16	RP11-60I3	fin	SC	2000	100	0
AL358937.16	RP11-60I3	fin	SC	AL360084.11	RP11-124M17	fin	SC	2000	100	1		simple sequence in gap
AL360084.11	RP11-124M17	fin	SC	AL137072.8	RP11-29B11	fin	SC	2000	100	0
AL137072.8	RP11-29B11	fin	SC	AL356798.18	RP11-467B11	fin	SC	1999	100	1		simple sequence in gap
AL356798.18	RP11-467B11	fin	SC	AL445214.7	RP11-208F1	fin	SC	2000	99.800	0
AL445214.7	RP11-208F1	fin	SC	AL353805.20	RP11-190I13	fin	SC	2000	100	0
AL353805.20	RP11-190I13	fin	SC	AL354917.8	RP11-61P7	fin	SC	2000	100	0
AL354917.8	RP11-61P7	fin	SC	AL390876.19	RP11-394D2	fin	SC	2000	99.950	0
AL390876.19	RP11-394D2	fin	SC	AL357293.16	RP11-418K10	fin	SC	2000	100	0
AL357293.16	RP11-418K10	fin	SC	AL162395.15	RP11-62L10	fin	SC	2000	100	0
AL162395.15	RP11-62L10	fin	SC	AL357935.14	RP11-80H12	fin	SC	2000	99.900	0
AL357935.14	RP11-80H12	fin	SC	AL161631.20	RP11-70K10	fin	SC	1999	99.750	1		simple sequence in gap
AL161631.20	RP11-70K10	fin	SC	AL359893.16	RP11-35N6	fin	SC	2000	100	0
AL359893.16	RP11-35N6	fin	SC	AL353621.19	RP11-490D19	fin	SC	2000	100	0
AL353621.19	RP11-490D19	fin	SC	AL591377.4	RP11-102M4	fin	SC	2000	100	0
AL591377.4	RP11-102M4	fin	SC	AL356516.12	RP11-75J9	fin	SC	2000	99.800	0
AL356516.12	RP11-75J9	fin	SC	AL133413.5	RP11-54K22	fin	SC	100	100	0
AL133413.5	RP11-54K22	fin	SC	AL360018.13	RP11-386L12	fin	SC	1999	99.950	1
AL360018.13	RP11-386L12	fin	SC	AL596454.8	RP11-177I8	fin	SC	2002	99.600	0
AL596454.8	RP11-177I8	fin	SC	AL355588.8	RP11-515J13	fin	SC	1999	100	1		simple sequence in gap
AL355588.8	RP11-515J13	fin	SC	AL391867.5	RP11-402M4	fin	SC	100	100	0
AL391867.5	RP11-402M4	fin	SC	AL137021.15	RP11-202A15	fin	SC	100	100	0
AL137021.15	RP11-202A15	fin	SC	AL442644.7	RP11-342F21	fin	SC	100	100	0
AL442644.7	RP11-342F21	fin	SC	AL354701.7	RP11-785H23	fin	SC	2000	100	0
AL354701.7	RP11-785H23	fin	SC	AL450312.10	RP11-138L24	fin	SC	2000	100	0
AL450312.10	RP11-138L24	fin	SC	AL365396.10	RP11-338N12	fin	SC	1994	99.649	2		simple sequence in gap
AL365396.10	RP11-338N12	fin	SC	AL449304.19	RP11-366H6	fin	SC	2000	100	0
AL449304.19	RP11-366H6	fin	SC	AL359679.8	RP11-298D22	fin	SC	2000	100	0
AL359679.8	RP11-298D22	fin	SC	AL589823.10	RP11-341A22	fin	SC	2000	99.900	0
AL589823.10	RP11-341A22	fin	SC	AL589844.4	RP11-436F21	fin	SC	2000	99.900	0
AL589844.4	RP11-436F21	fin	SC	AL390962.11	RP11-84G24	fin	SC	100	100	0
AL390962.11	RP11-84G24	fin	SC	AL356576.16	RP11-318L4	fin	SC	2000	100	0
AL356576.16	RP11-318L4	fin	SC	AL662794.5	RP11-726G19	fin	SC	2000	99.800	0
AL662794.5	RP11-726G19	fin	SC	AL590386.5	RP11-721G21	fin	SC	2000	100	0
AL590386.5	RP11-721G21	fin	SC	AL512639.8	RP11-346G21	fin	SC	2000	99.850	0
AL512639.8	RP11-346G21	fin	SC	AL590381.4	RP11-373O10	fin	SC	2000	100	0
AL590381.4	RP11-373O10	fin	SC	AL161791.15	RP11-82L2	fin	SC	2000	99.900	0
AL161791.15	RP11-82L2	fin	SC	AL354938.12	RP11-86L19	fin	SC	2000	100	0
AL354938.12	RP11-86L19	fin	SC	AL596402.5	RP11-384D5	fin	SC	2000	100	0
AL596402.5	RP11-384D5	fin	SC	AL512646.11	RP11-217O12	fin	SC	2000	100	1		simple sequence in gap
AL512646.11	RP11-217O12	fin	SC	AL450426.7	RP11-317C20	fin	SC	2000	99.850	0
AL450426.7	RP11-317C20	fin	SC	AL359846.11	RP11-413C10	fin	SC	100	100	0
AL359846.11	RP11-413C10	fin	SC	AL353685.23	RP11-31J20	fin	SC	2000	100	0
AL353685.23	RP11-31J20	fin	SC	AL359182.20	RP11-217B7	fin	SC	2000	100	0
AL359182.20	RP11-217B7	fin	SC	AL669893.4	RP11-122F10	fin	SC	2000	100	0
AL669893.4	RP11-122F10	fin	SC	AL591506.24	RP11-112N13	fin	SC	2000	98.700	1		identity < 99.6%
AL591506.24	RP11-112N13	fin	SC	AL590368.11	RP11-3K19	fin	SC	2000	100	0
AL590368.11	RP11-3K19	fin	SC	AL450265.11	RP11-477A7	fin	SC	2000	100	0
AL450265.11	RP11-477A7	fin	SC	AL161627.13	RP11-287A8	fin	SC	100	100	0
AL161627.13	RP11-287A8	fin	SC	AL158070.11	RP11-235C23	fin	SC	100	100	0
AL158070.11	RP11-235C23	fin	SC	AL627247.7	RP11-169B16	fin	SC	2000	100	0
AL627247.7	RP11-169B16	fin	SC	AL592437.7	RP11-18B3	fin	SC	2000	100	0
AL592437.7	RP11-18B3	fin	SC	AL592488.7	RP11-219P18	fin	SC	2000	100	0
AL592488.7	RP11-219P18	fin	SC	AL392084.6	RP11-576E23	fin	SC	2000	99.800	0
AL392084.6	RP11-576E23	fin	SC	AL732323.5	RP11-6F6	fin	SC	2000	100	0
AL732323.5	RP11-6F6	fin	SC	AL611922.7	RP11-633N4	fin	SC	2000	100	0
AL611922.7	RP11-633N4	fin	SC	AL512601.18	RP11-500B3	fin	SC	2000	100	0
AL512601.18	RP11-500B3	fin	SC	AL669899.4	RP11-207F6	fin	SC	2000	100	0
AL669899.4	RP11-207F6	fin	SC	AL451140.15	RP11-540H22	fin	SC	2000	100	0
AL451140.15	RP11-540H22	fin	SC	AL512649.6	RP11-308N19	fin	SC	2000	100	0
AL512649.6	RP11-308N19	fin	SC	AL590362.12	RP11-214G2	fin	SC	2000	99.950	0
AL590362.12	RP11-214G2	fin	SC	AL512593.9	RP11-508N12	fin	SC	2000	100	0
AL512593.9	RP11-508N12	fin	SC	AL807761.8	RP11-196I18	fin	SC	2000	100	0
AL807761.8	RP11-196I18	fin	SC	AL445487.8	RP11-417L14	fin	SC	2000	100	0
AL445487.8	RP11-417L14	fin	SC	AL137852.15	RP11-131A5	fin	SC	100	100	0
AL137852.15	RP11-131A5	fin	SC	AL359552.16	RP11-363D24	fin	SC	100	100	0
AL359552.16	RP11-363D24	fin	SC	AL360218.22	RP11-150J11	fin	SC	2000	100	0
AL360218.22	RP11-150J11	fin	SC	AL389915.19	RP11-438P9	fin	SC	2000	100	0
AL389915.19	RP11-438P9	fin	SC	AL162389.21	RP11-380I20	fin	SC	2000	100	0
AL162389.21	RP11-380I20	fin	SC	AL353137.7	RP11-272G11	fin	SC	2000	100	0
AL353137.7	RP11-272G11	fin	SC	AC068050.6	RP11-240E2	fin	WUGSC	20587	99.874	4		simple sequence in gap
AC068050.6	RP11-240E2	fin	WUGSC	AL353742.23	RP11-505C13	fin	SC	2000	100	0
AL353742.23	RP11-505C13	fin	SC	AL137019.6	RP11-143P10	fin	SC	2000	99.850	0
AL137019.6	RP11-143P10	fin	SC	AL353766.8	RP11-400A24	fin	SC	2000	99.900	0
AL353766.8	RP11-400A24	fin	SC	AL669983.2	RP11-220D10	fin	SC	2000	100	0
AL669983.2	RP11-220D10	fin	SC	AL358779.13	RP11-339N8	fin	SC	2000	100	0
AL358779.13	RP11-339N8	fin	SC	AL359692.9	RP11-3J11	fin	SC	2000	100	0
AL359692.9	RP11-3J11	fin	SC	AL354797.16	RP11-115J22	fin	SC	1994	99.850	1
AL354797.16	RP11-115J22	fin	SC	AL669894.3	RP11-312G2	fin	SC	2000	99.900	1
AL669894.3	RP11-312G2	fin	SC	AL358815.12	RP11-526J3	fin	SC	2000	100	0
AL358815.12	RP11-526J3	fin	SC	AL359963.29	RP11-18A3	fin	SC	2000	100	0
AL359963.29	RP11-18A3	fin	SC	AL450025.10	RP11-388N6	fin	SC	2000	100	0
AL450025.10	RP11-388N6	fin	SC	AL162733.9	RP11-397F23	fin	SC	2000	100	0
AL162733.9	RP11-397F23	fin	SC	AL135789.18	RP11-412H14	fin	SC	1999	100	1		simple sequence in gap
AL135789.18	RP11-412H14	fin	SC	AL158829.14	RP11-406O23	fin	SC	2000	99.850	1		simple sequence in gap
AL158829.14	RP11-406O23	fin	SC	AL627225.11	RP11-100N5	fin	SC	2000	100	0
AL627225.11	RP11-100N5	fin	SC	AL353806.9	RP11-174A8	fin	SC	1998	99.600	1		identity < 99.6%
AL353806.9	RP11-174A8	fin	SC	AL158823.11	RP11-151F5	fin	SC	2000	100	0
AL158823.11	RP11-151F5	fin	SC	AL353598.12	RP11-470J20	fin	SC	2000	100	0
AL353598.12	RP11-470J20	fin	SC	AL158158.14	RP11-427L11	fin	SC	2000	100	0
AL158158.14	RP11-427L11	fin	SC	AL354982.12	RP11-473H13	fin	SC	1997	99.950	3		simple sequence in gap
AL354982.12	RP11-473H13	fin	SC	AL592463.10	RP11-410K21	fin	SC	2000	99.850	0
AL592463.10	RP11-410K21	fin	SC	AL513328.12	RP13-461N9	fin	SC	2000	99.600	1
AL513328.12	RP13-461N9	fin	SC	AL157881.14	RP11-104M22	fin	SC	100	100	0
AL157881.14	RP11-104M22	fin	SC	AL442064.10	RP11-272D1	fin	SC	79314	99.834	21		simple sequence in gap
AL442064.10	RP11-272D1	fin	SC	AC007157.6	RP11-78A1	fin	WIBR	68452	100	0
AC007157.6	RP11-78A1	fin	WIBR	AL365231.11	RP11-278D5	fin	SC	4550	99.890	5		simple sequence in gap
AL365231.11	RP11-278D5	fin	SC	AL162414.11	RP11-202G18	fin	SC	100	100	0
AL162414.11	RP11-202G18	fin	SC	AL354661.14	RP11-386D8	fin	SC	100	100	0
AL354661.14	RP11-386D8	fin	SC	AL159168.15	RP11-401H23	fin	SC	100	100	0
AL159168.15	RP11-401H23	fin	SC	AL135787.13	RP11-16L21	fin	SC	100	100	0
AL135787.13	RP11-16L21	fin	SC	AL356491.12	RP11-310C13	fin	SC	2000	100	0
AL356491.12	RP11-310C13	fin	SC	AL354877.25	RP11-430K21	fin	SC	2000	100	0
AL354877.25	RP11-430K21	fin	SC	AL442066.11	RP11-570D4	fin	SC	2000	100	0
AL442066.11	RP11-570D4	fin	SC	AL138756.23	RP11-4O1	fin	SC	1987	99.849	4		simple sequence in gap
AL138756.23	RP11-4O1	fin	SC	AL158824.11	RP11-165N19	fin	SC	100	100	0
AL158824.11	RP11-165N19	fin	SC	AL359073.25	RP11-432F4	fin	SC	100	100	0
AL359073.25	RP11-432F4	fin	SC	AL162732.43	RP11-32M23	fin	SC	100	100	0
AL162732.43	RP11-32M23	fin	SC	AL445187.7	RP11-576C12	fin	SC	100	100	0
AL445187.7	RP11-576C12	fin	SC	AL390067.19	RP11-276E15	fin	SC	2000	100	0
AL390067.19	RP11-276E15	fin	SC	AL360235.12	RP11-88M9	fin	SC	2000	100	0
AL360235.12	RP11-88M9	fin	SC	AL139041.17	RP11-408O19	fin	SC	2000	100	0
AL139041.17	RP11-408O19	fin	SC	AL162588.22	RP11-349F12	fin	SC	100	100	0
AL162588.22	RP11-349F12	fin	SC	AL449105.22	RP11-9H12	fin	SC	98	100	0		half-dovetail of >0bp and <=50bp
AL449105.22	RP11-9H12	fin	SC	AL449305.4	RP11-110L1	fin	SC	2000	100	0
AL449305.4	RP11-110L1	fin	SC	AL137066.15	RP11-10I9	fin	SC	2000	100	0
AL137066.15	RP11-10I9	fin	SC	AL359455.22	RP11-444K11	fin	SC	2000	100	0
AL359455.22	RP11-444K11	fin	SC	AL162727.20	RP11-168K11	fin	SC	2000	100	0
AL162727.20	RP11-168K11	fin	SC	AL157702.10	RP11-18B16	fin	SC	100	100	0
AL157702.10	RP11-18B16	fin	SC	AL162393.15	RP11-534I8	fin	SC	100	100	0
AL162393.15	RP11-534I8	fin	SC	AL137850.12	RP11-56P10	fin	SC	100	100	0
AL137850.12	RP11-56P10	fin	SC	AL445543.20	RP11-4H20	fin	SC	100	100	0
AL445543.20	RP11-4H20	fin	SC	AL356796.16	RP11-82I1	fin	SC	100	100	0
AL356796.16	RP11-82I1	fin	SC	AL138895.16	RP11-9M16	fin	SC	2000	99.900	0
AL138895.16	RP11-9M16	fin	SC	AL160275.14	RP11-402G3	fin	SC	100	100	0
AL160275.14	RP11-402G3	fin	SC	AL390240.18	RP11-428F18	fin	SC	2000	100	0
AL390240.18	RP11-428F18	fin	SC	AL133412.7	RP11-78H18	fin	SC	2000	100	0
AL133412.7	RP11-78H18	fin	SC	AL162425.15	RP11-523L1	fin	SC	2000	100	0
AL162425.15	RP11-523L1	fin	SC	AL355601.19	RP11-445L6	fin	SC	1999	100	0
AL355601.19	RP11-445L6	fin	SC	AL731824.5	RP11-382H18	fin	SC	2000	100	0
AL731824.5	RP11-382H18	fin	SC	AL714001.13	RP11-763I5	fin	SC	1974	99.341	2		identity < 99.6%
AL714001.13	RP11-763I5	fin	SC	AL691420.13	RP11-352C6	fin	SC	1988	99.698	1		simple sequence in gap
AL691420.13	RP11-352C6	fin	SC	AL731897.12	RP11-284G10	fin	SC	2000	100	0
AL731897.12	RP11-284G10	fin	SC	AL731813.23	RP11-354N9	fin	SC	2000	100	0
AL731813.23	RP11-354N9	fin	SC	AL732367.3	RP11-81L14	fin	SC	2000	99.950	0
AL732367.3	RP11-81L14	fin	SC	AL691426.9	RP11-787B4	fin	SC	2000	100	0
AL691426.9	RP11-787B4	fin	SC	AL353141.13	RP11-58C3	fin	SC	2000	100	0
AL353141.13	RP11-58C3	fin	SC	AL137024.27	RP11-45A16	fin	SC	2000	100	0
AL137024.27	RP11-45A16	fin	SC	AL669963.4	RP11-44C14	fin	SC	2000	100	0
AL669963.4	RP11-44C14	fin	SC	AL133282.15	RP11-264C15	fin	SC	2000	100	0
AL133282.15	RP11-264C15	fin	SC	AL133284.13	RP11-67K19	fin	SC	100	100	0
AL133284.13	RP11-67K19	fin	SC	AL157829.24	RP11-305F14	fin	SC	100	100	0
AL157829.24	RP11-305F14	fin	SC	AL392085.12	RP11-225L6	fin	SC	100	100	0
AL392085.12	RP11-225L6	fin	SC	AL354981.41	RP11-696J10	fin	SC	2000	100	0
AL354981.41	RP11-696J10	fin	SC	AL355608.11	RP11-567J2	fin	SC	2000	100	0
AL355608.11	RP11-567J2	fin	SC	AL358792.24	RP11-280M4	fin	SC	2000	100	0
AL358792.24	RP11-280M4	fin	SC	AL445644.6	RP11-388N2	fin	SC	2000	100	0
AL445644.6	RP11-388N2	fin	SC	AL161630.12	RP11-500B12	fin	SC	100	100	0
AL161630.12	RP11-500B12	fin	SC	AL160272.16	RP11-336A17	fin	SC	2000	99.950	0
AL160272.16	RP11-336A17	fin	SC	AL354754.9	RP11-281A20	fin	SC	1998	99.950	1		simple sequence in gap
AL354754.9	RP11-281A20	fin	SC	AL445663.10	RP11-442A13	fin	SC	100	100	0
AL445663.10	RP11-442A13	fin	SC	AL158831.15	RP11-564A4	fin	SC	2000	100	0
AL158831.15	RP11-564A4	fin	SC	AL365195.17	RP11-451E16	fin	SC	2000	100	0
AL365195.17	RP11-451E16	fin	SC	AL445440.9	RP11-185G1	fin	SC	2000	100	0
AL445440.9	RP11-185G1	fin	SC	AL355592.11	RP11-349E4	fin	SC	1995	99.799	1
AL355592.11	RP11-349E4	fin	SC	AL589703.6	RP11-127L21	fin	SC	2000	100	0
AL589703.6	RP11-127L21	fin	SC	AL157780.12	RP11-98E22	fin	SC	2000	100	0
AL157780.12	RP11-98E22	fin	SC	AL512602.8	RP11-111M7	fin	SC	2000	100	0
AL512602.8	RP11-111M7	fin	SC	AL445310.9	RP11-61P11	fin	SC	2000	99.850	0
AL445310.9	RP11-61P11	fin	SC	AL353773.9	RP11-574M5	fin	SC	101	100	0
AL353773.9	RP11-574M5	fin	SC	AL138894.11	RP11-28O4	fin	SC	100	100	0
AL138894.11	RP11-28O4	fin	SC	AL353630.12	RP11-37K5	fin	SC	100	100	0
AL353630.12	RP11-37K5	fin	SC	AC006288.1	RP11-295D22	fin	WIBR	100	100	0
AC006288.1	RP11-295D22	fin	WIBR	AL445683.11	RP11-57K1	fin	SC	52731	100	1		simple sequence in gap
AL445683.11	RP11-57K1	fin	SC	AL354931.13	RP11-535B18	fin	SC	2000	99.600	0
AL354931.13	RP11-535B18	fin	SC	AL441989.13	RP11-360A18	fin	SC	2000	100	0
AL441989.13	RP11-360A18	fin	SC	AL355589.8	RP11-168F17	fin	SC	100	100	0
AL355589.8	RP11-168F17	fin	SC	AL592549.7	RP11-374B16	fin	SC	2000	100	0
AL592549.7	RP11-374B16	fin	SC	AL353736.11	RP11-412P1	fin	SC	1999	100	2		simple sequence in gap
AL353736.11	RP11-412P1	fin	SC	AL391870.16	RP11-491C24	fin	SC	2000	100	0
AL391870.16	RP11-491C24	fin	SC	AL590642.9	RP11-164D15	fin	SC	2000	100	0
AL590642.9	RP11-164D15	fin	SC	AL138836.15	RP11-88M19	fin	SC	2000	100	0
AL138836.15	RP11-88M19	fin	SC	AL161911.17	RP11-27I1	fin	SC	100	100	0
AL161911.17	RP11-27I1	fin	SC	AL354792.27	RP11-556L12	fin	SC	2000	100	0
AL354792.27	RP11-556L12	fin	SC	AC006430.22	RP11-525G7	fin	WIBR	2000	100	1		simple sequence in gap
AC006430.22	RP11-525G7	fin	WIBR	AL137068.10	RP11-165P4	fin	SC	100	100	0
AL137068.10	RP11-165P4	fin	SC	AL513122.7	RP11-477J21	fin	SC	100	100	0
AL513122.7	RP11-477J21	fin	SC	AL161784.13	RP11-342H3	fin	SC	2000	100	0
AL161784.13	RP11-342H3	fin	SC	AL359644.10	RP11-162D16	fin	SC	2000	99.900	0
AL359644.10	RP11-162D16	fin	SC	AL357936.25	RP11-524G24	fin	SC	2000	100	0
AL357936.25	RP11-524G24	fin	SC	AL365274.17	RP11-298A17	fin	SC	2000	99.850	0
AL365274.17	RP11-298A17	fin	SC	AL450285.13	RP11-358F24	fin	SC	2000	100	0
AL450285.13	RP11-358F24	fin	SC	AL596244.9	RP11-244O19	fin	SC	2000	100	0
AL596244.9	RP11-244O19	fin	SC	AL445587.10	RP11-429D3	fin	SC	2000	100	0
AL445587.10	RP11-429D3	fin	SC	AL442634.13	RP11-297L11	fin	SC	2000	100	0
AL442634.13	RP11-297L11	fin	SC	AL162423.18	RP11-456D21	fin	SC	2000	100	0
AL162423.18	RP11-456D21	fin	SC	AL162424.20	RP11-498E2	fin	SC	100	100	0
AL162424.20	RP11-498E2	fin	SC	AL359636.17	RP11-542K23	fin	SC	100	100	0
AL359636.17	RP11-542K23	fin	SC	AL162254.17	RP11-64P14	fin	SC	100	100	0
AL162254.17	RP11-64P14	fin	SC	AC006313.1	RP11-465F21	fin	WIBR	78450	99.983	7		simple sequence in gap
AC006313.1	RP11-465F21	fin	WIBR	AL359512.15	RP11-163B6	fin	SC	2000	99.950	0
AL359512.15	RP11-163B6	fin	SC	AC007066.4	RP11-355O1	fin	WIBR	1999	100	1		simple sequence in gap
AC007066.4	RP11-355O1	fin	WIBR	AL358946.15	RP11-137O6	fin	SC	2000	99.800	1		simple sequence in gap
AL358946.15	RP11-137O6	fin	SC	AL365338.17	RP11-123N4	fin	SC	2000	99.800	0
AL365338.17	RP11-123N4	fin	SC	AL365504.33	RP11-524I9	fin	SC	100	100	0
AL365504.33	RP11-524I9	fin	SC	AL445489.10	RP11-230L22	fin	SC	2000	99.850	0
AL445489.10	RP11-230L22	fin	SC	AL161790.23	RP11-558L8	fin	SC	1988	99.950	1
AL161790.23	RP11-558L8	fin	SC	AL390774.10	RP11-417B4	fin	SC	2000	100	0
AL390774.10	RP11-417B4	fin	SC	AL158208.14	RP11-55P21	fin	SC	100	100	0
AL158208.14	RP11-55P21	fin	SC	AC006450.13	RP11-85O21	fin	WIBR	100	100	0
AC006450.13	RP11-85O21	fin	WIBR	AL158052.10	RP11-570J20	fin	SC	51270	100	0
AL158052.10	RP11-570J20	fin	SC	AL445284.11	RP11-277P3	fin	SC	2000	100	0
AL445284.11	RP11-277P3	fin	SC	AL162724.16	RP11-121A14	fin	SC	2000	100	0
AL162724.16	RP11-121A14	fin	SC	AL137846.24	RP11-101K10	fin	SC	100	100	0
AL137846.24	RP11-101K10	fin	SC	AL354979.17	RP11-10J18	fin	SC	2000	100	0
AL354979.17	RP11-10J18	fin	SC	AL669818.11	RP11-164H5	fin	SC	2000	100	0
AL669818.11	RP11-164H5	fin	SC	AL158075.11	RP11-348K2	fin	SC	2000	100	0
AL158075.11	RP11-348K2	fin	SC	AL354928.9	RP11-175D17	fin	SC	100	100	0
AL354928.9	RP11-175D17	fin	SC	AL451125.7	RP11-474P12	fin	SC	100	100	0
AL451125.7	RP11-474P12	fin	SC	AL445930.11	RP11-366O20	fin	SC	2000	99.900	0
AL445930.11	RP11-366O20	fin	SC	AL354710.17	RP11-65N13	fin	SC	2000	99.950	0
AL354710.17	RP11-65N13	fin	SC	AL627223.23	RP11-184B22	fin	SC	2000	100	0
AL627223.23	RP11-184B22	fin	SC	AL359632.9	RP11-269P11	fin	SC	2000	100	0
AL359632.9	RP11-269P11	fin	SC	AL162584.9	RP11-12A16	fin	SC	2000	99.900	0
AL162584.9	RP11-12A16	fin	SC	AL358074.22	RP11-423C15	fin	SC	1999	100	1		simple sequence in gap
AL358074.22	RP11-423C15	fin	SC	AL627303.17	RP11-770B5	fin	SC	2000	100	0
AL627303.17	RP11-770B5	fin	SC	AL445186.4	RP11-336P12	fin	SC	2000	99.950	0
AL445186.4	RP11-336P12	fin	SC	AL589923.11	RP11-374O2	fin	SC	1992	100	1		simple sequence in gap
AL589923.11	RP11-374O2	fin	SC	AL445664.14	RP11-343J18	fin	SC	2000	100	0
AL445664.14	RP11-343J18	fin	SC	AL162391.15	RP11-438L3	fin	SC	1999	99.850	1		simple sequence in gap
AL162391.15	RP11-438L3	fin	SC	AC006443.1	RP11-494N15	fin	WIBR	2000	99.900	0
AC006443.1	RP11-494N15	fin	WIBR	AL356309.23	RP11-205K6	fin	SC	2000	100	0
AL356309.23	RP11-205K6	fin	SC	AL161908.13	RP11-123K19	fin	SC	2000	100	0
AL161908.13	RP11-123K19	fin	SC	AL161731.20	RP11-489N22	fin	SC	100	100	0
AL161731.20	RP11-489N22	fin	SC	AL354944.22	RP11-106H5	fin	SC	1999	100	1		simple sequence in gap
AL354944.22	RP11-106H5	fin	SC	AL160169.12	RP11-405C6	fin	SC	1996	99.900	1
AL160169.12	RP11-405C6	fin	SC	AL356862.10	RP11-1M19	fin	SC	2000	100	0
AL356862.10	RP11-1M19	fin	SC	AL357623.14	RP11-342E24	fin	SC	2000	99.800	0
AL357623.14	RP11-342E24	fin	SC	AL450263.15	RP13-225O21	fin	SC	1999	99.950	1		simple sequence in gap
AL450263.15	RP13-225O21	fin	SC	AL445222.9	RP11-356B19	fin	SC	100	100	0
AL445222.9	RP11-356B19	fin	SC	AL390116.26	RP11-373J8	fin	SC	2000	99.800	1		simple sequence in gap
AL390116.26	RP11-373J8	fin	SC	AL162426.20	RP11-56D16	fin	SC	2000	100	0
AL162426.20	RP11-56D16	fin	SC	AL162586.26	RP11-228B15	fin	SC	2000	99.950	0
AL162586.26	RP11-228B15	fin	SC	AL157935.28	RP11-203J24	fin	SC	2000	100	0
AL157935.28	RP11-203J24	fin	SC	AL360268.14	RP11-379C10	fin	SC	303	100	0
AL360268.14	RP11-379C10	fin	SC	AL590708.18	RP11-395P17	fin	SC	2000	100	0
AL590708.18	RP11-395P17	fin	SC	AL590722.15	RP11-57J6	fin	SC	2000	100	1		simple sequence in gap
AL590722.15	RP11-57J6	fin	SC	AL359091.10	RP11-339B21	fin	SC	2000	100	1
AL359091.10	RP11-339B21	fin	SC	AL445287.16	RP11-187B3	fin	SC	2000	100	0
AL445287.16	RP11-187B3	fin	SC	AL356481.16	RP11-216B9	fin	SC	2000	100	0
AL356481.16	RP11-216B9	fin	SC	AL359678.15	RP11-550J21	fin	SC	2000	100	0
AL359678.15	RP11-550J21	fin	SC	AL441992.17	RP11-545E17	fin	SC	2000	100	0
AL441992.17	RP11-545E17	fin	SC	AL672142.9	RP11-101E3	fin	SC	2000	100	0
AL672142.9	RP11-101E3	fin	SC	AL592211.27	RP11-167N5	fin	SC	2000	100	0
AL592211.27	RP11-167N5	fin	SC	AL158151.16	RP11-247A12	fin	SC	2000	99.850	2		simple sequence in gap
AL158151.16	RP11-247A12	fin	SC	AL161785.16	RP11-344B5	fin	SC	2000	100	0
AL161785.16	RP11-344B5	fin	SC	AL353803.23	RP11-65J3	fin	SC	2000	100	0
AL353803.23	RP11-65J3	fin	SC	AL391056.25	RP11-492E3	fin	SC	2000	100	0
AL391056.25	RP11-492E3	fin	SC	AL590369.18	RP11-483H20	fin	SC	2000	99.750	0
AL590369.18	RP11-483H20	fin	SC	AL592219.16	RP11-5J2	fin	SC	2000	100	0
AL592219.16	RP11-5J2	fin	SC	AL158207.15	RP11-409K20	fin	SC	2000	99.950	0
AL158207.15	RP11-409K20	fin	SC	AL136141.13	RP11-138E2	fin	SC	100	100	0
AL136141.13	RP11-138E2	fin	SC	AL392105.13	RP11-202H3	fin	SC	2000	100	0
AL392105.13	RP11-202H3	fin	SC	AL360004.22	RP11-88G17	fin	SC	2000	100	0
AL360004.22	RP11-88G17	fin	SC	FP565345.1	ABC7-40618900G22	top	SC	2489	99.839	1		alignment exists; one or more unfinished sequences; half-dovetail of >0bp and <=50bp
AL354898.10	RP11-618A20	fin	SC	AL353695.7	RP11-17L7	fin	SC	100	100	0
AL353695.7	RP11-17L7	fin	SC	AL359092.14	RP11-57C19	fin	SC	100	100	0
AL359092.14	RP11-57C19	fin	SC	AL161733.20	RP11-83J21	fin	SC	2000	100	0
AL161733.20	RP11-83J21	fin	SC	AL583807.20	RP11-105C7	fin	SC	2000	100	0
AL583807.20	RP11-105C7	fin	SC	AL355872.15	RP11-143H20	fin	SC	2000	100	0
AL355872.15	RP11-143H20	fin	SC	AL157938.22	RP11-544A12	fin	SC	1997	99.800	3		simple sequence in gap
AL157938.22	RP11-544A12	fin	SC	AL354855.26	RP11-643E14	fin	SC	2000	100	0
AL354855.26	RP11-643E14	fin	SC	AL358781.19	RP11-334J6	fin	SC	2000	100	0
AL358781.19	RP11-334J6	fin	SC	AL160276.21	RP11-40A7	fin	SC	2000	100	0
AL160276.21	RP11-40A7	fin	SC	AL160271.19	RP11-323H21	fin	SC	2000	100	0
AL160271.19	RP11-323H21	fin	SC	AL603649.9	RP11-326N3	fin	SC	1988	99.950	1		simple sequence in gap
AL603649.9	RP11-326N3	fin	SC	AL713892.10	RP13-195B13	fin	SC	2000	99.900	0
AL713892.10	RP13-195B13	fin	SC	AL691506.13	RP13-220H23	fin	SC	329	100	0
AL691506.13	RP13-220H23	fin	SC	AL513102.8	RP11-32B11	fin	SC	2000	100	0
AL513102.8	RP11-32B11	fin	SC	AL353631.17	RP11-5N16	fin	SC	2000	100	0
AL353631.17	RP11-5N16	fin	SC	AL159997.14	RP11-479K20	fin	SC	2000	100	1		simple sequence in gap
AL159997.14	RP11-479K20	fin	SC	AL353701.15	RP11-203M2	fin	SC	100	98.000	0		identity < 99.6%; alignment length < 2000
AL353701.15	RP11-203M2	fin	SC	AL354735.14	RP11-738I14	fin	SC	100	100	0
AL354735.14	RP11-738I14	fin	SC	AL160165.17	RP11-143F18	fin	SC	100	100	0
AL160165.17	RP11-143F18	fin	SC	AL445645.10	RP11-295G24	fin	SC	100	100	0
AL445645.10	RP11-295G24	fin	SC	AL593851.6	RP11-415H23	fin	SC	2000	100	0
AL593851.6	RP11-415H23	fin	SC	AL162417.23	RP11-326L24	fin	SC	1998	99.750	3		simple sequence in gap
AL162417.23	RP11-326L24	fin	SC	AL732364.9	RP11-430N14	fin	SC	2000	99.950	0
AL732364.9	RP11-430N14	fin	SC	AL772161.10	CTD-2612A24	fin	SC	58782	99.866	15
AL772161.10	CTD-2612A24	fin	SC	AL593848.15	RP13-100B2	fin	SC	2000	100	0
AL593848.15	RP13-100B2	fin	SC	BX324209.11	RP13-388O5	fin	SC	2000	100	0
BX324209.11	RP13-388O5	fin	SC	BX649571.6	LL09NC01-124H8	fin	SC	2000	100	0
BX649571.6	LL09NC01-124H8	fin	SC	BX629352.5	80267E6	fin	SC	2000	100	0
BX629352.5	80267E6	fin	SC	AC002101.1	?	fin	WIBR	1996	99.299	7		half-dovetail of >50bp
AC002101.1	?	fin	WIBR	AL365494.17	RP11-317B10	fin	SC	7092	99.901	3		simple sequence in gap
AL365494.17	RP11-317B10	fin	SC	AL590710.14	RP11-153P4	fin	SC	2000	99.800	0
AL590710.14	RP11-153P4	fin	SC	AL357934.29	RP11-565P9	fin	SC	2000	100	0
AL357934.29	RP11-565P9	fin	SC	AL445931.29	RP11-374P20	fin	SC	2000	99.950	1
AL445931.29	RP11-374P20	fin	SC	AL591386.19	RP11-349K21	fin	SC	2000	100	0
AL591386.19	RP11-349K21	fin	SC	BX649632.2	LL09NC01-251B2	fin	SC	1998	99.850	1		simple sequence in gap
BX649632.2	LL09NC01-251B2	fin	SC	BX649601.2	LL09NC01-139C3	fin	SC	1999	100	1		simple sequence in gap
FP565578.1	ABC10-44484300O12	pre	SC	AL354796.21	RP11-145E17	fin	SC	27288	99.842	13		alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
AL354796.21	RP11-145E17	fin	SC	AL683798.22	RP11-205O8	fin	SC	2000	100	0
AL683798.22	RP11-205O8	fin	SC	AC156789.1	WI2-2903G16	fin	UWGC	6652	99.759	0
AC156789.1	WI2-2903G16	fin	UWGC	AL669970.10	RP11-473E2	fin	SC	7653	99.961	1		simple sequence in gap
AL669970.10	RP11-473E2	fin	SC	AL591890.31	RP11-54A22	fin	SC	2000	100	0
AL591890.31	RP11-54A22	fin	SC	AL645768.7	RP13-129E14	fin	SC	2000	99.600	0
AL645768.7	RP13-129E14	fin	SC	AL603650.10	RP11-263F14	fin	SC	2000	99.850	0
AL603650.10	RP11-263F14	fin	SC	AL353611.19	RP11-447M12	fin	SC	2000	99.850	0
AL353611.19	RP11-447M12	fin	SC	AL159992.13	RP11-166H7	fin	SC	2000	100	0
AL159992.13	RP11-166H7	fin	SC	AL390778.32	RP11-399H11	fin	SC	100	99.000	0		identity < 99.6%
AL390778.32	RP11-399H11	fin	SC	AL353615.37	RP11-555H7	fin	SC	2000	100	0
AL353615.37	RP11-555H7	fin	SC	AL161452.19	RP11-426A6	fin	SC	2000	100	0
AL161452.19	RP11-426A6	fin	SC	AL354761.17	RP11-98L5	fin	SC	100	100	0
AL354761.17	RP11-98L5	fin	SC	AL158822.19	RP11-100C15	fin	SC	2000	99.900	0
AL158822.19	RP11-100C15	fin	SC	AL353636.16	RP11-469E24	fin	SC	2000	100	0
AL353636.16	RP11-469E24	fin	SC	AL355574.27	RP11-432J22	fin	SC	2000	100	0
AL355574.27	RP11-432J22	fin	SC	AL591038.9	RP11-120E1	fin	SC	2000	100	0
AL591038.9	RP11-120E1	fin	SC	AL138781.13	RP11-83N9	fin	SC	1999	99.800	1
AL138781.13	RP11-83N9	fin	SC	CR392000.2	1959D15	fin	SC	2000	99.950	0
BX649589.3	RP5-1175C6	fin	SC	AL592301.14	RP11-413M3	fin	SC	2000	99.750	0
AL592301.14	RP11-413M3	fin	SC	AL354671.27	RP11-611D20	fin	SC	2000	99.950	0
AL354671.27	RP11-611D20	fin	SC	AL590226.23	RP11-251M1	fin	SC	2000	100	0
AL590226.23	RP11-251M1	fin	SC	AL355987.31	RP11-216L13	fin	SC	2000	100	0
AL355987.31	RP11-216L13	fin	SC	AL449425.15	RP11-523A20	fin	SC	2000	100	0
AL449425.15	RP11-523A20	fin	SC	AL807752.10	RP11-229P13	fin	SC	1995	100	2		simple sequence in gap
AL807752.10	RP11-229P13	fin	SC	AL929554.20	RP11-350O14	fin	SC	2000	99.850	0
AL929554.20	RP11-350O14	fin	SC	BX255925.17	RP13-122B23	fin	SC	2000	99.950	0
BX255925.17	RP13-122B23	fin	SC	BX322799.22	RP13-927H1	fin	SC	2001	99.950	0		half-dovetail of >0bp and <=50bp
BX322799.22	RP13-927H1	fin	SC	AL365502.57	RP11-48C7	fin	SC	2000	100	0
AL365502.57	RP11-48C7	fin	SC	AL590627.25	RP13-467E5	fin	SC	900	100	0
AL590627.25	RP13-467E5	fin	SC	AL611925.27	RP11-188C12	fin	SC	2000	100	0
AL611925.27	RP11-188C12	fin	SC	AL772363.15	RP11-974F22	fin	SC	1999	99.850	1		simple sequence in gap
AL772363.15	RP11-974F22	fin	SC	AL591424.12	RP11-424E7	fin	SC	2000	100	0
AL591424.12	RP11-424E7	fin	SC	AL954642.10	RP11-885N19	fin	SC	1999	99.750	1		alignment length < 2000