NCBI

Find a TPF

Join Legend: Click on the colored ball in the 'join' column to see alignment details.

Join view for chr 19 (reference)
acc1 clone1 clone1 status clone1 center acc2 clone2 clone2 status clone2 center align len perc. id gaps join status comments
AC008993.3 LLNLR-222A1 fin JGI AC008977.9 LLNLF-150E1 fin JGI 5313 100 0 green  
AC008977.9 LLNLF-150E1 fin JGI AC016626.4 LLNLR-226C11 fin JGI 8637 100 1 green simple sequence in gap
AC016626.4 LLNLR-226C11 fin JGI AC092192.1 LLNLF-127D1 fin JGI 21718 100 0 green  
AC092192.1 LLNLF-127D1 fin JGI AC092299.5 LLNLF-173C4 fin JGI 11728 100 0 green  
AC092299.5 LLNLF-173C4 fin JGI AC010507.6 LLNLF-176F2 fin JGI 18898 100 0 green  
AC010507.6 LLNLF-176F2 fin JGI AC098474.1 LLNLF-123C7 fin JGI 1442 100 0 green  
AC098474.1 LLNLF-123C7 fin JGI AC016588.9 CTD-3113P16 fin JGI 1124 99.822 1 green simple sequence in gap
AC016588.9 CTD-3113P16 fin JGI AC010641.9 LLFOS-22E10 fin JGI 12534 99.721 7 yellow >0 gap of 25bp or more, not simple sequence
AC010641.9 LLFOS-22E10 fin JGI AC008988.13 LLNLF-215A5 fin JGI 10021 100 0 green  
AC008988.13 LLNLF-215A5 fin JGI AC138433.2 XXFOS-85899E4 fin JGI 8153 99.693 3 yellow >0 gap of 25bp or more, not simple sequence
AC138433.2 XXFOS-85899E4 fin JGI AC006124.2 ? fin JGI 18197 99.879 3 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC006124.2 ? fin JGI AC005775.1 LLNLF-159F9 fin JGI 3406 100 0 green  
AC005775.1 LLNLF-159F9 fin JGI AC011531.7 LLNLR-231G5 fin JGI 1601 100 0 green  
AC011531.7 LLNLR-231G5 fin JGI AC011556.9 LLNLR-281B11 fin JGI 15370 100 1 yellow >0 gap of 25bp or more, not simple sequence
AC011556.9 LLNLR-281B11 fin JGI AC009005.10 LLNLR-299A11 fin JGI 4861 100 0 green  
AC009005.10 LLNLR-299A11 fin JGI AC005559.2 ? fin JGI 17614 100 0 green  
AC005559.2 ? fin JGI AC004449.1 LLNLR-299G3 fin !! 151 100 0 green  
AC004449.1 LLNLR-299G3 fin !! AC004156.1 LLNLR-298G2 fin JGI 4539 100 0 green  
AC004156.1 LLNLR-298G2 fin JGI AC112708.3 LLNL19FOS-33C4 fin JGI 5322 100 0 green  
AC112708.3 LLNL19FOS-33C4 fin JGI AC005763.1 LLNLR-244B1 fin JGI 6526 99.985 0 green  
AC005763.1 LLNLR-244B1 fin JGI AC004030.2 LLNLF-176E8 fin JGI 2240 100 0 green  
AC004030.2 LLNLF-176E8 fin JGI AC114272.4 ? fin JGI 2765 100 0 green  
AC114272.4 ? fin JGI AC006273.1 LLNLF-176B5 fin JGI 4559 100 1 green simple sequence in gap
AC006273.1 LLNLF-176B5 fin JGI AC112703.3 LLNL19FOS-22B6 fin JGI 358 100 0 green  
AC112703.3 LLNL19FOS-22B6 fin JGI AC004799.2 LLNLR-298A4 fin JGI 1929 100 0 green  
AC004799.2 LLNLR-298A4 fin JGI AC112706.2 CTD-3195E18 fin JGI 8490 99.882 0 green  
AC112706.2 CTD-3195E18 fin JGI AC005379.1 LLNLR-288E3 fin 7 !$! 6580 99.939 2 green simple sequence in gap
AC005379.1 LLNLR-288E3 fin 7 !$! AC005391.1 LLNLR-260G6 fin JGI 9462 100 0 green  
AC005391.1 LLNLR-260G6 fin JGI AC004528.1 LLNLR-284B4 fin JGI 3816 100 0 green  
AC004528.1 LLNLR-284B4 fin JGI AC011558.6 LLNLR-291F12 fin JGI 1905 100 0 green  
AC011558.6 LLNLR-291F12 fin JGI AC093066.2 LLNLR-237C1 fin JGI 1613 100 0 green  
AC093066.2 LLNLR-237C1 fin JGI AC004151.1 LLNLR-248C2 fin JGI 1206 100 0 green  
AC004151.1 LLNLR-248C2 fin JGI AC005390.1 LLNLR-273F8 fin JGI 1637 100 0 green  
AC005390.1 LLNLR-273F8 fin JGI AC093067.2 LLNLR-240D7 fin JGI 1173 100 0 green  
AC093067.2 LLNLR-240D7 fin JGI AC120982.2 LLNLR-289A1 fin JGI 1063 100 0 green  
AC120982.2 LLNLR-289A1 fin JGI AC011544.6 LLNLR-264D11 fin JGI 1729 100 0 green  
AC011544.6 LLNLR-264D11 fin JGI AC004221.2 LLNLR-252D12 fin JGI 281 100 0 green  
AC004221.2 LLNLR-252D12 fin JGI AC004258.1 LLNLR-293G10 fin JGI 2273 100 0 green  
AC004258.1 LLNLR-293G10 fin JGI AC005330.2 LLNLR-303E7 fin JGI 3161 100 0 green  
AC005330.2 LLNLR-303E7 fin JGI AC004623.2 LLNLR-250H3 fin JGI 235 100 0 green  
AC004623.2 LLNLR-250H3 fin JGI AC005329.1 LLNLR-307A6 fin JGI 526 100 0 green  
AC005329.1 LLNLR-307A6 fin JGI AC027307.5 CTB-25B13 fin JGI 1089 99.908 0 green  
AC027307.5 CTB-25B13 fin JGI AC005943.1 LLNLR-267A2 fin JGI 4377 100 0 green  
AC005943.1 LLNLR-267A2 fin JGI AC005321.1 LLNLR-234A9 fin JGI 293 100 0 green  
AC005321.1 LLNLR-234A9 fin JGI AC006274.1 LLNLR-254D11 fin JGI 2630 100 0 green  
AC006274.1 LLNLR-254D11 fin JGI AC112704.3 LLNLR-235A6 fin JGI 2698 100 0 green  
AC112704.3 LLNLR-235A6 fin JGI AC005619.1 LLNLR-305E9 fin JGI 7410 100 1 green simple sequence in gap
AC005619.1 LLNLR-305E9 fin JGI AC005256.2 LLNLF-177F11 fin JGI 2363 100 0 green  
AC005256.2 LLNLF-177F11 fin JGI AC004755.2 LLFOS-27A6 fin JGI 454 100 0 green  
AC004755.2 LLFOS-27A6 fin JGI AC012615.4 CTB-31O20 fin JGI 524 100 0 green  
AC012615.4 CTB-31O20 fin JGI AC005306.2 LLNLR-232D4 fin JGI 6879 99.709 2 green simple sequence in gap
AC005306.2 LLNLR-232D4 fin JGI AC004678.1 LLNLR-304A6 fin JGI 642 100 0 green  
AC004678.1 LLNLR-304A6 fin JGI AC007136.1 LLNLF-157H3 fin JGI 3509 100 0 green  
AC007136.1 LLNLF-157H3 fin JGI AC005328.1 LLNLR-226E12 fin JGI 1401 100 0 green  
AC005328.1 LLNLR-226E12 fin JGI AC005545.1 LLNLR-226C10 fin JGI 4683 100 0 green  
AC005545.1 LLNLR-226C10 fin JGI AC005257.1 LLNLF-39C10 fin JGI 1853 100 0 green  
AC005257.1 LLNLF-39C10 fin JGI AC093456.1 ? fin 166 100 0 green  
AC093456.1 ? fin AC004490.1 LLNLR-254H9 fin JGI 111 100 0 green  
AC004490.1 LLNLR-254H9 fin JGI AC005263.1 LLNLF-162C9 fin JGI 1218 100 0 green  
AC005263.1 LLNLF-162C9 fin JGI AC138127.1 LLNLR-281G7 fin JGI 29641 100 0 green  
AC138127.1 LLNLR-281G7 fin JGI AC004152.1 LLFOS-25A4 fin JGI 11019 100 0 green  
AC004152.1 LLFOS-25A4 fin JGI AC104530.2 ? fin JGI 7298 100 0 green  
AC104530.2 ? fin JGI AC005258.2 LLNLR-269E7 fin JGI 10524 99.667 0 green  
AC005258.2 LLNLR-269E7 fin JGI AC004410.1 LLFOS-48D6 fin JGI 373 100 1 green  
AC004410.1 LLFOS-48D6 fin JGI AC098785.2 LLNLR-252E3 fin JGI 1518 100 0 green  
AC098785.2 LLNLR-252E3 fin JGI AC011542.9 LLNLR-259F3 fin JGI 1143 100 0 green  
AC011542.9 LLNLR-259F3 fin JGI AC011522.8 LLNLF-208A9 fin JGI 5554 100 0 green  
AC011522.8 LLNLF-208A9 fin JGI AC005624.1 LLNLR-261E9 fin JGI 1932 99.948 2 yellow half-dovetail of >0bp and <=50bp
AC005624.1 LLNLR-261E9 fin JGI AC005512.1 LLNLF-191B7 fin JGI 2155 100 0 green  
AC005512.1 LLNLF-191B7 fin JGI AC104537.2 LLNLR-308E11 fin JGI 22095 100 1 green simple sequence in gap
AC104537.2 LLNLR-308E11 fin JGI AC005756.1 LLFOS-46C3 fin JGI 4952 100 0 green  
AC005756.1 LLFOS-46C3 fin JGI AC092068.2 CTC-265F19 fin JGI 10841 99.917 4 green simple sequence in gap
AC092068.2 CTC-265F19 fin JGI AC104432.2 LLNLR-242C12 fin JGI 1137 100 1 green simple sequence in gap
AC104432.2 LLNLR-242C12 fin JGI AC006538.1 ? fin JGI 1119 99.821 1 green simple sequence in gap
AC006538.1 ? fin JGI AC006130.2 ? fin JGI 1998 99.950 0 green  
AC006130.2 ? fin JGI AC119403.2 LLNLR-265A7 fin JGI 11543 99.835 8 green simple sequence in gap
AC119403.2 LLNLR-265A7 fin JGI AC011559.4 LLNLR-300G1 fin JGI 28576 99.993 1 green simple sequence in gap
AC011559.4 LLNLR-300G1 fin JGI AC006277.1 LLNLF-214H8 fin JGI 552 100 0 green  
AC006277.1 LLNLF-214H8 fin JGI AC007766.1 LLNLR-226A10 fin JGI 2676 100 0 green  
AC007766.1 LLNLR-226A10 fin JGI AC011549.7 LLNLR-274C4 fin JGI 8868 100 1 green simple sequence in gap
AC011549.7 LLNLR-274C4 fin JGI AC093053.2 LLNLF-143H10 fin JGI 130 100 0 green  
AC093053.2 LLNLF-143H10 fin JGI AC005944.1 LLNLF-194H1 fin JGI 1540 100 0 green  
AC005944.1 LLNLF-194H1 fin JGI AC104526.2 LLNLF-207C6 fin JGI 7350 100 0 green  
AC104526.2 LLNLF-207C6 fin JGI AC005262.1 LLNLF-198G6 fin JGI 690 100 0 green  
AC005262.1 LLNLF-198G6 fin JGI AC005264.1 LLNLR-275C7 fin JGI 6655 100 0 green  
AC005264.1 LLNLR-275C7 fin JGI AC011547.4 LLNLR-272C5 fin JGI 1212 100 0 green  
AC011547.4 LLNLR-272C5 fin JGI AC005331.2 LLNLR-275D1 fin JGI 3431 100 0 green  
AC005331.2 LLNLR-275D1 fin JGI AC006505.1 LLFOS-48A12 fin JGI 2121 100 0 green  
AC006505.1 LLFOS-48A12 fin JGI AC123911.1 RP11-554A7 fin JGI 2317 99.914 3 green  
AC123911.1 RP11-554A7 fin JGI AC010649.8 LLNLR-304C3 fin JGI 4204 99.952 0 green  
AC010649.8 LLNLR-304C3 fin JGI AC104524.2 LLNLF-185G1 fin JGI 3116 100 0 green  
AC104524.2 LLNLF-185G1 fin JGI AC007792.1 LLNLR-258B10 fin JGI 7874 100 0 green  
AC007792.1 LLNLR-258B10 fin JGI AC005514.1 LLNLR-231E11 fin JGI 6392 100 0 green  
AC005514.1 LLNLR-231E11 fin JGI AC104104.3 LLNLF-121B11 fin JGI 1146 100 0 green  
AC104104.3 LLNLF-121B11 fin JGI AC005778.1 LLNLF-185A12 fin JGI 1843 100 0 green  
AC005778.1 LLNLF-185A12 fin JGI AC093077.2 LLNLR-297A2 fin JGI 1136 100 0 green  
AC093077.2 LLNLR-297A2 fin JGI AC005551.1 LLNLR-225C1 fin JGI 1936 100 0 green  
AC005551.1 LLNLR-225C1 fin JGI AC093052.2 LLNLF-143G5 fin JGI 1489 100 0 green  
AC093052.2 LLNLF-143G5 fin JGI AC005787.1 LLNLR-296E6 fin JGI 1050 100 0 green  
AC005787.1 LLNLR-296E6 fin JGI AC005786.1 LLNLR-272H9 fin JGI 5901 100 0 green  
AC005786.1 LLNLR-272H9 fin JGI AC116968.2 LLNLR-256H5 fin JGI 1769 100 0 green  
AC116968.2 LLNLR-256H5 fin JGI AC005175.1 LLNLR-276E1 fin JGI 10662 100 0 green  
AC005175.1 LLNLR-276E1 fin JGI AC005542.1 LLNLR-287E12 fin JGI 8571 100 0 green  
AC005542.1 LLNLR-287E12 fin JGI AC093071.2 LLNLR-268B2 fin JGI 1242 100 0 green  
AC093071.2 LLNLR-268B2 fin JGI AC004637.1 LLNLF-124A7 fin JGI 1372 100 0 green  
AC004637.1 LLNLF-124A7 fin JGI AC006125.1 ? fin JGI 5055 100 0 green  
AC006125.1 ? fin JGI AC005954.1 LLNLR-248F12 fin JGI 3767 100 0 green  
AC005954.1 LLNLR-248F12 fin JGI AC005777.1 LLNLF-119G3 fin 1929 100 0 green  
AC005777.1 LLNLF-119G3 fin AC004598.1 LLNLF-177D12 fin JGI 1416 100 0 green  
AC004598.1 LLNLF-177D12 fin JGI AC093078.3 LLNLR-305B7 fin JGI 11942 100 1 green simple sequence in gap
AC093078.3 LLNLR-305B7 fin JGI AC011488.7 CTB-171N13 fin JGI 25744 100 0 green  
AC011488.7 CTB-171N13 fin JGI AC016586.9 CTD-2622I13 fin JGI 9769 99.949 2 green simple sequence in gap
AC016586.9 CTD-2622I13 fin JGI AC006930.1 LLNLR-295B7 fin JGI 6396 99.891 1 green simple sequence in gap
AC006930.1 LLNLR-295B7 fin JGI AC005578.1 LLNLF-166D11 fin JGI 7941 100 0 green  
AC005578.1 LLNLF-166D11 fin JGI AC008616.6 CTB-144D21 fin JGI 1572 100 0 green  
AC008616.6 CTB-144D21 fin JGI AC104521.3 CTB-157M14 fin JGI 2344 100 0 green  
AC104521.3 CTB-157M14 fin JGI AC007292.1 ? fin JGI 6573 99.985 1 green simple sequence in gap
AC007292.1 ? fin JGI AC011498.7 CTB-50L17 fin JGI 8168 99.976 0 green  
AC011498.7 CTB-50L17 fin JGI AC005339.1 LLNLR-300C1 fin 8995 99.989 0 green  
AC005339.1 LLNLR-300C1 fin AC005594.1 LLNLR-229A6 fin JGI 5516 100 0 green  
AC005594.1 LLNLR-229A6 fin JGI AC005783.1 LLNLR-293E3 fin JGI 1804 100 0 green  
AC005783.1 LLNLR-293E3 fin JGI AC006537.1 LLNLR-262G12 fin JGI 5800 100 0 green  
AC006537.1 LLNLR-262G12 fin JGI AC005523.1 LLNLR-242B6 fin JGI 6049 100 0 green  
AC005523.1 LLNLR-242B6 fin JGI AC027319.5 CTC-518P12 fin JGI 7437 99.866 4 green simple sequence in gap
AC027319.5 CTC-518P12 fin JGI AC104525.4 LLNLF-201H10 fin JGI 2140 99.860 1 green simple sequence in gap
AC104525.4 LLNLF-201H10 fin JGI AC053467.1 ? fin JGI 11584 100 0 green  
AC053467.1 ? fin JGI AC104520.2 LLNLF-137B9 fin JGI 10553 100 0 green  
AC104520.2 LLNLF-137B9 fin JGI AC005595.1 LLNLF-121G9 fin JGI 13220 99.992 0 green  
AC005595.1 LLNLF-121G9 fin JGI AC093033.2 LLNLR-248A5 fin JGI 1249 100 0 green  
AC093033.2 LLNLR-248A5 fin JGI AC022517.1 CTC-482H14 fin JGI 1557 99.871 1 green  
AC022517.1 CTC-482H14 fin JGI AC118535.1 LLNLR-287H1 fin JGI 16394 99.896 7 green simple sequence in gap
AC118535.1 LLNLR-287H1 fin JGI AC005788.1 LLNLR-226E4 fin JGI 12949 100 0 green  
AC005788.1 LLNLR-226E4 fin JGI AC005338.1 LLNLR-278E6 fin JGI 7136 100 0 green  
AC005338.1 LLNLR-278E6 fin JGI AC005790.1 LLNLR-304G9 fin JGI 2236 100 0 green  
AC005790.1 LLNLR-304G9 fin JGI AC005335.1 LLNLR-306B4 fin JGI 6233 100 0 green  
AC005335.1 LLNLR-306B4 fin JGI AC011490.7 CTB-179L3 fin JGI 10963 99.909 4 green simple sequence in gap
AC011490.7 CTB-179L3 fin JGI AC005764.1 LLNLR-275D3 fin JGI 10254 99.990 1 green simple sequence in gap
AC005764.1 LLNLR-275D3 fin JGI AC004560.1 LLNLR-268D8 fin JGI 8040 100 0 green  
AC004560.1 LLNLR-268D8 fin JGI AC005765.1 LLNLF-164F8 fin JGI 145 100 0 green  
AC005765.1 LLNLF-164F8 fin JGI AC011533.6 LLNLR-240E6 fin JGI 12437 100 0 green  
AC011533.6 LLNLR-240E6 fin JGI AC093059.3 LLNLF-183C4 fin JGI 1328 100 0 green  
AC093059.3 LLNLF-183C4 fin JGI AC004611.1 LLNLF-200H12 fin JGI 1263 100 0 green  
AC004611.1 LLNLF-200H12 fin JGI AC134303.2 LLNLR-265H6 fin JGI 15155 100 0 green  
AC134303.2 LLNLR-265H6 fin JGI AC011499.5 CTB-54O9 fin JGI 27438 99.982 4 green simple sequence in gap
AC011499.5 CTB-54O9 fin JGI AC024592.5 XXP1-29569 fin JGI 6004 99.767 9 green simple sequence in gap
AC024592.5 XXP1-29569 fin JGI AC104532.2 LLNLR-271A4 fin JGI 2112 100 0 green  
AC104532.2 LLNLR-271A4 fin JGI AC004602.1 LLNLF-193E7 fin JGI 9984 100 0 green  
AC004602.1 LLNLF-193E7 fin JGI AC093050.3 LLNLF-114F12 fin JGI 1226 100 0 green  
AC093050.3 LLNLF-114F12 fin JGI AC005784.1 LLNLR-264H3 fin JGI 1217 100 0 green  
AC005784.1 LLNLR-264H3 fin JGI AC011444.5 CTC-232P5 fin JGI 13515 99.933 5 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC011444.5 CTC-232P5 fin JGI AC104538.2 CTB-66B24 fin JGI 33832 99.959 6 green simple sequence in gap
AC104538.2 CTB-66B24 fin JGI AC011471.6 CTC-503J8 fin JGI 2345 100 0 green  
AC011471.6 CTC-503J8 fin JGI AC114268.2 LLNLR-244A1 fin JGI 6703 99.672 5 green simple sequence in gap
AC114268.2 LLNLR-244A1 fin JGI AC011491.7 CTB-180A7 fin JGI 10990 99.854 8 green simple sequence in gap
AC011491.7 CTB-180A7 fin JGI AC011539.7 LLNLR-253C9 fin JGI 2843 99.930 0 green  
AC011539.7 LLNLR-253C9 fin JGI AC010503.8 CTD-2396E7 fin JGI 19367 99.948 3 green simple sequence in gap
AC010503.8 CTD-2396E7 fin JGI AC008760.7 CTD-3128G10 fin JGI 13253 99.841 10 green simple sequence in gap
AC008760.7 CTD-3128G10 fin JGI AC020954.8 LLNLR-292A7 fin JGI 14844 99.993 0 green  
AC020954.8 LLNLR-292A7 fin JGI AC022156.8 LLNLR-272E8 fin JGI 12764 100 0 green  
AC022156.8 LLNLR-272E8 fin JGI AC010647.5 LLNLR-279F8 fin JGI 4113 100 0 green  
AC010647.5 LLNLR-279F8 fin JGI AC020895.8 CTC-312O10 fin JGI 5946 99.899 2 green simple sequence in gap
AC020895.8 CTC-312O10 fin JGI AC025278.5 RP11-1137G4 fin JGI 71880 99.681 55 green simple sequence in gap
AC025278.5 RP11-1137G4 fin JGI AC010606.7 CTB-25J19 fin JGI 24546 99.853 14 green simple sequence in gap
AC010606.7 CTB-25J19 fin JGI AC010311.11 CTB-62I7 fin JGI 17123 100 1 green simple sequence in gap
AC010311.11 CTB-62I7 fin JGI AC010526.7 LLNLR-301A8 fin JGI 11367 100 1 green simple sequence in gap
AC010526.7 LLNLR-301A8 fin JGI AC125387.2 CTD-3056C15 fin JGI 2998 99.767 3 green simple sequence in gap
AC126754.2 XXP1-103340 fin JGI AC119396.3 CTB-133G6 fin JGI 24153 99.868 13 green simple sequence in gap
AC119396.3 CTB-133G6 fin JGI AC008878.10 CTD-2207O23 fin JGI 20330 99.936 7 green simple sequence in gap
AC008878.10 CTD-2207O23 fin JGI AC009003.7 LLNLR-281C9 fin JGI 28042 99.650 16 green simple sequence in gap
AC009003.7 LLNLR-281C9 fin JGI AC098793.2 CTD-3218M16 fin JGI 2014 99.553 1 yellow identity < 99.6%
AC098793.2 CTD-3218M16 fin JGI AC008763.9 CTD-3214H19 fin JGI 1146 100 0 green  
AC008763.9 CTD-3214H19 fin JGI AC008812.7 CTD-2102F19 fin JGI 50259 100 3 green simple sequence in gap
AC008812.7 CTD-2102F19 fin JGI AC010336.8 CTD-3193O13 fin JGI 21720 100 1 green simple sequence in gap
AC010336.8 CTD-3193O13 fin JGI AC008975.3 LLNLF-138H2 fin JGI 11341 99.991 1 green simple sequence in gap
AC008975.3 LLNLF-138H2 fin JGI AC008946.7 CTD-2325M2 fin JGI 12542 99.992 1 green simple sequence in gap
AC008946.7 CTD-2325M2 fin JGI AC022146.8 CTD-3020H12 fin JGI 46477 100 0 green  
AC022146.8 CTD-3020H12 fin JGI AC010323.8 CTD-2550O8 fin JGI 35016 99.791 34 yellow >0 gap of 25bp or more, not simple sequence
AC010323.8 CTD-2550O8 fin JGI AC136469.2 RP11-886P16 fin JGI 66070 99.955 14 yellow half-dovetail of >0bp and <=50bp
AC136469.2 RP11-886P16 fin JGI AC092298.2 LLNLF-132G8 fin JGI 2068 99.952 1 green simple sequence in gap
AC092298.2 LLNLF-132G8 fin JGI AC092316.5 LLNLR-309F9 fin JGI 19169 100 0 green  
AC092316.5 LLNLR-309F9 fin JGI AC124902.2 LLNLR-269C7 fin JGI 15182 100 1 green simple sequence in gap
AC124902.2 LLNLR-269C7 fin JGI AC130469.2 LLNLR-282E1 fin JGI 12163 100 0 green  
AC130469.2 LLNLR-282E1 fin JGI AC092315.2 LLNLR-306A10 fin JGI 28805 100 0 green  
AC092315.2 LLNLR-306A10 fin JGI AC145203.1 XXFOS-800752H11 fin JGI 36621 99.926 16 green simple sequence in gap
AC130468.2 CTD-2586B10 fin JGI AC092312.3 LLNLR-288G3 fin JGI 11001 99.991 2 green simple sequence in gap
AC092312.3 LLNLR-288G3 fin JGI AC092566.2 LLNLR-239F4 fin JGI 19750 100 1 green simple sequence in gap
AC092566.2 LLNLR-239F4 fin JGI AC093230.2 LLNLF-130H12 fin JGI 5773 100 0 green  
AC093230.2 LLNLF-130H12 fin JGI AC012616.7 CTD-2557P19 fin JGI 7328 99.945 3 green simple sequence in gap
AC012616.7 CTD-2557P19 fin JGI AC008734.7 CTD-2529P6 fin JGI 28078 99.751 17 green simple sequence in gap
AC008734.7 CTD-2529P6 fin JGI AC016584.5 CTD-2596O15 fin JGI 18998 99.732 8 green simple sequence in gap
AC016584.5 CTD-2596O15 fin JGI AC011464.5 CTC-444D3 fin JGI 14311 99.874 11 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC011464.5 CTC-444D3 fin JGI AC006271.2 CTC-440L2 fin JGI 36086 99.994 3 green simple sequence in gap
AC006271.2 CTC-440L2 fin JGI AC011451.6 CTC-325H20 fin JGI 1259 100 0 green  
AC011451.6 CTC-325H20 fin JGI AC008567.5 CTC-543D15 fin JGI 57374 100 1 green  
AC008567.5 CTC-543D15 fin JGI AC008759.9 CTD-3116E22 fin JGI 18956 99.979 6 green simple sequence in gap
AC008759.9 CTD-3116E22 fin JGI AC008752.6 CTD-2623N2 fin JGI 36628 99.994 0 green  
AC008752.6 CTD-2623N2 fin JGI AC008742.9 CTD-2553C6 fin JGI 22504 100 0 green  
AC008742.9 CTD-2553C6 fin JGI AC020931.6 CTD-2240E14 fin JGI 13116 99.733 9 green simple sequence in gap
AC020931.6 CTD-2240E14 fin JGI AC010077.1 LLNLR-243D10 fin JGI 1711 99.766 0 green  
AC010077.1 LLNLR-243D10 fin JGI AC011511.12 CTD-2369P2 fin JGI 2962 100 0 green  
AC011511.12 CTD-2369P2 fin JGI AC114271.2 ? fin JGI 10449 99.962 3 green simple sequence in gap
AC114271.2 ? fin JGI AC011557.7 LLNLR-281G3 fin JGI 1605 100 0 green  
AC011557.7 LLNLR-281G3 fin JGI AC134304.2 LLNLR-275A4 fin JGI 11919 100 0 green  
AC134304.2 LLNLR-275A4 fin JGI AC011548.4 LLNLR-272E5 fin JGI 7641 100 0 green  
AC011548.4 LLNLR-272E5 fin JGI AC011529.4 LLNLR-227F11 fin JGI 4145 100 0 green  
AC011529.4 LLNLR-227F11 fin JGI AC011461.5 CTC-429L19 fin JGI 9852 99.990 2 green simple sequence in gap
AC011461.5 CTC-429L19 fin JGI AC011475.6 CTC-539A10 fin JGI 8798 100 0 green  
AC011475.6 CTC-539A10 fin JGI AC011552.6 LLNLR-276F8 fin JGI 974 100 0 green  
AC011552.6 LLNLR-276F8 fin JGI AC112707.2 CTB-31C11 fin JGI 3057 99.706 2 green simple sequence in gap
AC112707.2 CTB-31C11 fin JGI AC011554.5 LLNLR-277G1 fin JGI 24873 99.896 13 green simple sequence in gap
AC011554.5 LLNLR-277G1 fin JGI AC007229.1 ? fin JGI 4042 100 0 green  
AC007229.1 ? fin JGI AC007565.1 LLNLR-236H12 fin JGI 3138 100 0 green  
AC007565.1 LLNLR-236H12 fin JGI AC011442.5 CTC-215O4 fin JGI 4479 100 0 green  
AC011442.5 CTC-215O4 fin JGI AC006127.1 ? fin JGI 6080 100 0 green  
AC006127.1 ? fin JGI AC011485.6 CTB-164O19 fin JGI 1305 100 0 green  
AC011485.6 CTB-164O19 fin JGI AC009000.6 LLNLR-276C11 fin JGI 11442 99.921 2 green simple sequence in gap
AC009000.6 LLNLR-276C11 fin JGI AC011472.7 CTC-510F12 fin JGI 3166 99.905 1 green simple sequence in gap
AC011472.7 CTC-510F12 fin JGI AC098777.3 CTD-2167F3 fin JGI 1616 100 0 green  
AC098777.3 CTD-2167F3 fin JGI AC024575.6 CTD-2342J14 fin JGI 1070 100 1 green  
AC024575.6 CTD-2342J14 fin JGI AC008481.9 CTC-398G3 fin JGI 28191 99.773 33 green simple sequence in gap
AC008481.9 CTC-398G3 fin JGI AC009001.8 LLNLR-279C10 fin JGI 3964 100 0 green  
AC009001.8 LLNLR-279C10 fin JGI AC020947.6 LLNLR-225F3 fin JGI 22910 100 0 green  
AC020947.6 LLNLR-225F3 fin JGI AC104527.2 CTD-2333A24 fin JGI 21558 99.991 2 green simple sequence in gap
AC104527.2 CTD-2333A24 fin JGI AC008543.9 CTC-499B15 fin JGI 12456 99.992 1 green simple sequence in gap
AC008543.9 CTC-499B15 fin JGI AC020951.7 LLNLR-247E3 fin JGI 20543 99.990 1 green simple sequence in gap
AC020951.7 LLNLR-247E3 fin JGI AC008770.7 CTD-2006C1 fin JGI 13350 100 2 green simple sequence in gap
AC008770.7 CTD-2006C1 fin JGI AC022415.5 CTC-359D24 fin JGI 27572 99.978 5 green simple sequence in gap
AC022415.5 CTC-359D24 fin JGI AC012618.7 CTD-2666L21 fin JGI 3722 100 0 green  
AC012618.7 CTD-2666L21 fin JGI AC008758.7 CTD-3105H18 fin JGI 50919 100 6 green simple sequence in gap
AC008758.7 CTD-3105H18 fin JGI AC010422.7 CTD-2192J16 fin JGI 34739 100 0 green  
AC010422.7 CTD-2192J16 fin JGI AC018761.6 CTD-2659N19 fin JGI 30810 100 1 green  
AC018761.6 CTD-2659N19 fin JGI AC020934.9 CTD-2265O21 fin JGI 37953 99.987 4 green simple sequence in gap
AC020934.9 CTD-2265O21 fin JGI AD000092.1 LLNLR-274C8 unk JGI 30949 99.997 5 green simple sequence in gap
AD000092.1 LLNLR-274C8 unk JGI AC092069.2 CTC-425F1 fin JGI 55453 99.923 26 green simple sequence in gap
AC092069.2 CTC-425F1 fin JGI AC138474.2 CTC-239J10 fin JGI 6180 99.968 1 green simple sequence in gap
AC138474.2 CTC-239J10 fin JGI AC022152.7 LLNLF-63E12 fin JGI 22104 99.968 2 green simple sequence in gap
AC022152.7 LLNLF-63E12 fin JGI AC007787.1 LLNLR-310E2 fin JGI 5655 100 0 green  
AC007787.1 LLNLR-310E2 fin JGI AC005546.1 LLNLR-255D5 fin JGI 7104 100 0 green  
AC005546.1 LLNLR-255D5 fin JGI AC011446.6 CTC-250I14 fin JGI 4473 99.955 1 green  
AC011446.6 CTC-250I14 fin JGI AC005305.1 LLNLR-305H7 fin JGI 2112 99.716 1 green simple sequence in gap
AC005305.1 LLNLR-305H7 fin JGI AC026805.5 LLNLR-268A1 fin JGI 1578 100 0 green  
AC026805.5 LLNLR-268A1 fin JGI AC124224.1 LLNLR-285D11 fin JGI 22548 100 0 green  
AC124224.1 LLNLR-285D11 fin JGI AC022436.6 LLNLR-303H1 fin JGI 17478 100 0 green  
AC022436.6 LLNLR-303H1 fin JGI AC098781.2 LLNLR-231C1 fin JGI 1851 100 0 green  
AC098781.2 LLNLR-231C1 fin JGI AC005513.1 LLNLR-234D11 fin JGI 1517 100 0 green  
AC005513.1 LLNLR-234D11 fin JGI AC093062.2 LLNLR-225C12 fin JGI 1382 100 0 green  
AC093062.2 LLNLR-225C12 fin JGI AC008540.6 CTC-496P20 fin JGI 1609 99.938 2 green simple sequence in gap
AC008540.6 CTC-496P20 fin JGI AC104107.3 CTC-473C7 fin JGI 1019 100 0 green  
AC104107.3 CTC-473C7 fin JGI AC008686.8 CTB-5E10 fin JGI 653 100 0 green  
AC008686.8 CTB-5E10 fin JGI AC020916.8 CTD-3252C9 fin JGI 1286 99.456 1 yellow identity < 99.6%
AC020916.8 CTD-3252C9 fin JGI AC022098.9 CTB-55O6 fin JGI 38760 99.992 2 green simple sequence in gap
AC022098.9 CTB-55O6 fin JGI AC011509.8 CTD-2189E23 fin JGI 31546 99.991 3 green simple sequence in gap
AC011509.8 CTD-2189E23 fin JGI AC008569.7 CTC-548K16 fin JGI 15599 99.801 14 green simple sequence in gap
AC008569.7 CTC-548K16 fin JGI AC012318.7 LLNLF-143B12 fin JGI 8247 99.830 4 green simple sequence in gap
AC012318.7 LLNLF-143B12 fin JGI AC009004.6 LLNLR-291B11 fin JGI 16579 100 0 green  
AC009004.6 LLNLR-291B11 fin JGI AC024585.6 LLNLF-194E9 fin JGI 7118 100 0 green  
AC024585.6 LLNLF-194E9 fin JGI AC010527.5 LLNLR-301B5 fin JGI 12725 100 0 green  
AC010527.5 LLNLR-301B5 fin JGI AC140008.2 XXYAC-TAR19.1 fin JGI 2074 100 0 green  
AC140008.2 XXYAC-TAR19.1 fin JGI AC135052.2 RP13-558I13 fin JGI 3520 99.886 2 green simple sequence in gap
AC135052.2 RP13-558I13 fin JGI AC022149.3 CTD-3093B17 fin JGI 2171 99.079 5 yellow identity < 99.6%
AC022149.3 CTD-3093B17 fin JGI AC090427.2 CTD-2292J18 fin JGI 8639 100 0 green  
AC090427.2 CTD-2292J18 fin JGI AC005327.1 LLNLF-169E9 fin JGI 7083 99.831 6 green simple sequence in gap
AC005327.1 LLNLF-169E9 fin JGI AC005255.1 ? fin JGI 3619 99.972 0 green  
AC005255.1 ? fin JGI AC002988.1 LLNLR-237F10 fin JGI 26668 99.989 1 green simple sequence in gap
AC002988.1 LLNLR-237F10 fin JGI AC098791.2 LLNLR-277H9 fin JGI 1477 100 0 green  
AC098791.2 LLNLR-277H9 fin JGI AC004659.1 ? fin ! 1164 99.828 0 green  
AC004659.1 ? fin ! AC104528.2 LLNLR-242C9 fin JGI 11531 99.800 10 green simple sequence in gap
AC104528.2 LLNLR-242C9 fin JGI AC004699.1 LLNLR-281H9 fin JGI 1723 100 0 green  
AC004699.1 LLNLR-281H9 fin JGI AC004794.1 LLNLF-163B5 fin JGI 5062 100 0 green  
AC004794.1 LLNLF-163B5 fin JGI AC003956.1 LLNLR-303H2 fin JGI 8864 100 0 green  
AC003956.1 LLNLR-303H2 fin JGI AC004663.1 LLNLR-259B3 fin JGI 1506 100 0 green  
AC004663.1 LLNLR-259B3 fin JGI AC004257.1 LLNLR-294G9 fin JGI 5303 100 0 green  
AC004257.1 LLNLR-294G9 fin JGI AC004798.1 LLNLR-277E2 fin JGI 730 100 0 green  
AC004798.1 LLNLR-277E2 fin JGI AC003111.1 LLNLR-242E10 fin JGI 6640 100 0 green  
AC003111.1 LLNLR-242E10 fin JGI AC005776.1 LLNLR-246C6 fin JGI 504 100 0 green  
AC005776.1 LLNLR-246C6 fin JGI AC093060.2 LLNLF-210G10 fin JGI 2418 100 0 green  
AC093060.2 LLNLF-210G10 fin JGI AC005785.1 LLNLR-302A11 fin JGI 2238 100 0 green  
AC005785.1 LLNLR-302A11 fin JGI AC006128.1 ? fin JGI 2878 100 0 green  
AC006128.1 ? fin JGI AC007059.1 LLNLF-166E12 fin JGI 17895 100 0 green  
AC007059.1 LLNLF-166E12 fin JGI AC011492.8 CTB-187L3 fin JGI 1061 100 0 green  
AC011492.8 CTB-187L3 fin JGI AD000091.1 LLNLF-108D6 unk JGI 24810 99.754 27 green simple sequence in gap
AD000091.1 LLNLF-108D6 unk JGI AC093072.3 LLNLR-270E1 fin JGI 1349 100 1 yellow alignment length < 2000
AC093072.3 LLNLR-270E1 fin JGI AD000685.1 LLNLF-211C3 unk JGI 1017 100 0 yellow alignment length < 2000
AD000685.1 LLNLF-211C3 unk JGI AC122702.2 LLNLR-245C5 fin JGI 9967 100 0 green  
AC122702.2 LLNLR-245C5 fin JGI AC004523.1 LLNLF-181E1 fin JGI 2038 100 0 green  
AC004523.1 LLNLF-181E1 fin JGI AC104533.3 LLNLR-276C7 fin JGI 8126 100 2 green simple sequence in gap
AC104533.3 LLNLR-276C7 fin JGI AC004597.1 LLNLF-164G2 fin JGI 15228 99.987 0 green  
AC004597.1 LLNLF-164G2 fin JGI AC011537.8 LLNLR-249E10 fin JGI 7909 100 0 green  
AC011537.8 LLNLR-249E10 fin JGI AC114267.2 ? fin JGI 22724 100 1 green simple sequence in gap
AC114267.2 ? fin JGI AC004510.1 LLNLR-265D5 fin JGI 13186 100 0 green  
AC004510.1 LLNLR-265D5 fin JGI AC004791.1 LLNLR-224A12 fin JGI 9770 100 0 green  
AC004791.1 LLNLR-224A12 fin JGI AC005336.1 LLNLF-158E9 fin JGI 703 100 0 green  
AC005336.1 LLNLF-158E9 fin JGI AC020950.8 LLNLR-244B2 fin JGI 19467 100 2 green simple sequence in gap
AC020950.8 LLNLR-244B2 fin JGI AC011517.7 LLNLF-175A7 fin JGI 2962 100 0 green  
AC011517.7 LLNLF-175A7 fin JGI AC004609.1 LLNLF-125A8 fin JGI 671 100 0 green  
AC004609.1 LLNLF-125A8 fin JGI AC004790.1 LLNLF-136C3 fin JGI 2775 100 0 green  
AC004790.1 LLNLF-136C3 fin JGI AC114273.2 LLNLF-67B8 fin JGI 8362 100 0 green  
AC114273.2 LLNLF-67B8 fin JGI AC008894.9 CTD-2231E14 fin JGI 2469 100 1 green simple sequence in gap
AC008894.9 CTD-2231E14 fin JGI AC020911.9 CTD-2562J15 fin JGI 32760 100 0 green  
AC020911.9 CTD-2562J15 fin JGI AC020917.4 CTD-2013N17 fin JGI 3398 100 0 green  
AC020917.4 CTD-2013N17 fin JGI AC008764.9 CTD-3222D19 fin JGI 11483 99.930 2 green simple sequence in gap
AC008764.9 CTD-3222D19 fin JGI AC024075.4 CTC-429P9 fin JGI 17666 100 1 green simple sequence in gap
AC024075.4 CTC-429P9 fin JGI AC008737.11 CTD-2538G9 fin JGI 20342 99.720 12 green simple sequence in gap
AC008737.11 CTD-2538G9 fin JGI AC020908.7 CTD-2528A14 fin JGI 3567 99.972 0 green  
AC020908.7 CTD-2528A14 fin JGI AC092476.1 LLNLR-231E1 fin JGI 1002 100 0 green  
AC092476.1 LLNLR-231E1 fin JGI AC020913.9 CTD-3032J10 fin JGI 1404 100 0 green  
AC020913.9 CTD-3032J10 fin JGI AC010646.5 LLNLR-277B12 fin JGI 11118 99.982 2 green simple sequence in gap
AC010646.5 LLNLR-277B12 fin JGI AC104522.2 LLNLF-170H6 fin JGI 3922 100 0 green  
AC104522.2 LLNLF-170H6 fin JGI AC010463.6 CTD-2278I10 fin JGI 15073 99.974 3 green simple sequence in gap
AC010463.6 CTD-2278I10 fin JGI AC010319.10 CTD-2521M24 fin JGI 24272 100 2 green  
AC010319.10 CTD-2521M24 fin JGI AC010618.9 CTD-3131K8 fin JGI 1827 100 0 green  
AC010618.9 CTD-3131K8 fin JGI AC008761.8 CTD-3149D2 fin JGI 7383 100 0 green  
AC008761.8 CTD-3149D2 fin JGI AC005952.2 LLNLF-155F3 fin JGI 8590 99.802 7 green simple sequence in gap
AC005952.2 LLNLF-155F3 fin JGI AC007201.1 ? fin JGI 2923 100 0 green  
AC007201.1 ? fin JGI AC005796.1 LLNLR-276A8 fin JGI 3184 100 0 green  
AC005796.1 LLNLR-276A8 fin JGI AC011540.3 LLNLR-256E3 fin JGI 7328 99.986 0 green  
AC011540.3 LLNLR-256E3 fin JGI AC005602.1 LLNLF-155E11 fin JGI 10574 100 0 green  
AC005602.1 LLNLF-155E11 fin JGI AC020904.7 CTB-52I2 fin JGI 13219 99.992 1 green simple sequence in gap
AC020904.7 CTB-52I2 fin JGI AC005793.1 LLNLF-193H6 fin JGI 6176 100 0 green  
AC005793.1 LLNLF-193H6 fin JGI AC093054.2 LLNLF-153B1 fin JGI 1848 100 0 green  
AC093054.2 LLNLF-153B1 fin JGI AC007192.1 ? fin JGI 1202 100 0 green  
AC007192.1 ? fin JGI AC093080.2 LLNLF-96A7 fin JGI 1588 100 0 green  
AC093080.2 LLNLF-96A7 fin JGI AC068499.1 LLNLR-225F10 fin JGI 1078 100 0 green  
AC068499.1 LLNLR-225F10 fin JGI AC005759.1 LLNLR-229D3 fin JGI 1568 100 0 green  
AC005759.1 LLNLR-229D3 fin JGI AC008397.7 CTC-251H24 fin JGI 14033 99.907 9 green simple sequence in gap
AC008397.7 CTC-251H24 fin JGI AC010335.8 CTD-3137H5 fin JGI 54936 99.984 6 green simple sequence in gap
AC010335.8 CTD-3137H5 fin JGI AC005387.1 LLNLR-255H5 fin JGI 14958 99.880 3 green simple sequence in gap
AC005387.1 LLNLR-255H5 fin JGI AC005253.1 LLNLR-224D1 fin JGI 8611 100 0 green  
AC005253.1 LLNLR-224D1 fin JGI AC003112.1 LLNLR-264D8 fin JGI 7144 100 0 green  
AC003112.1 LLNLR-264D8 fin JGI AC008998.5 LLNLR-262C5 fin JGI 7022 100 0 green  
AC008998.5 LLNLR-262C5 fin JGI AC004476.1 LLNLR-255A4 fin JGI 1129 100 0 green  
AC004476.1 LLNLR-255A4 fin JGI AC004400.2 LLNLF-199F1 fin JGI 9008 100 0 green  
AC004400.2 LLNLF-199F1 fin JGI AC006123.1 ? fin JGI 407 100 0 green  
AC006123.1 ? fin JGI AC003107.1 LLNLR-262A8 fin JGI 11980 100 0 green  
AC003107.1 LLNLR-262A8 fin JGI AC004517.1 LLNLF-155B11 fin JGI 4955 100 0 green  
AC004517.1 LLNLF-155B11 fin JGI AC003972.1 LLNLR-297F9 fin JGI 13255 99.993 0 green  
AC003972.1 LLNLR-297F9 fin JGI AC005197.1 LLNLR-287B1 fin JGI 2171 100 0 green  
AC005197.1 LLNLR-287B1 fin JGI AC002985.1 LLNLR-231A10 fin 5035 100 0 green  
AC002985.1 LLNLR-231A10 fin AC005932.1 LLNLR-275B1 fin JGI 1849 100 0 green  
AC005932.1 LLNLR-275B1 fin JGI AC004447.1 LLNLR-300F11 fin JGI 8740 100 0 green  
AC004447.1 LLNLR-300F11 fin JGI AC003038.1 LLNLR-271A3 fin JGI 16024 100 0 green  
AC003038.1 LLNLR-271A3 fin JGI AC004143.1 LLNLR-260C5 fin JGI 10494 100 0 green  
AC004143.1 LLNLR-260C5 fin JGI AC002126.1 LLNLR-262D10 fin 163 100 0 green  
AC002126.1 LLNLR-262D10 fin AC003110.1 LLNLF-96C6 fin JGI 2571 100 0 green  
AC003110.1 LLNLF-96C6 fin JGI AC138430.2 LLNLR-259H9 fin JGI 10970 100 1 green simple sequence in gap
AC138430.2 LLNLR-259H9 fin JGI AC003967.2 LLNLR-226B12 fin JGI 10804 100 0 green  
AC003967.2 LLNLR-226B12 fin JGI AC004475.1 LLNLF-197D6 fin JGI 1377 100 0 green  
AC004475.1 LLNLF-197D6 fin JGI AC022543.3 LLNLR-232E12 fin JGI 9386 100 0 green  
AC022543.3 LLNLR-232E12 fin JGI AC003030.1 LLNLR-259E12 fin JGI 6527 100 0 green  
AC003030.1 LLNLR-259E12 fin JGI AC092067.2 CTB-184G21 fin JGI 6505 99.954 0 green  
AC092067.2 CTB-184G21 fin JGI AC011448.5 CTC-260F20 fin JGI 9207 99.989 3 green simple sequence in gap
AC011448.5 CTC-260F20 fin JGI AC002306.1 LLNLR-300H11 fin JGI 13984 100 2 green simple sequence in gap
AC002306.1 LLNLR-300H11 fin JGI AC011458.7 CTC-412M14 fin JGI 7037 99.986 0 green  
AC011458.7 CTC-412M14 fin JGI AC104523.3 CTB-180E3 fin JGI 31115 99.994 3 green simple sequence in gap
AC104523.3 CTB-180E3 fin JGI AC011477.5 CTC-559E9 fin JGI 15488 99.845 7 green simple sequence in gap
AC011477.5 CTC-559E9 fin JGI AC007204.1 ? fin JGI 14900 99.993 0 green  
AC007204.1 ? fin JGI AC006539.1 ? fin JGI 30604 99.964 3 green simple sequence in gap
AC006539.1 ? fin JGI AC011447.7 CTC-260E6 fin JGI 6213 99.920 2 green simple sequence in gap
AC011447.7 CTC-260E6 fin JGI AC078899.1 ? fin JGI 30728 99.990 0 green  
AC008554.8 CTC-513N18 fin JGI AC010636.6 CTD-2332E11 fin JGI 73638 99.712 39 green simple sequence in gap
AC010636.6 CTD-2332E11 fin JGI AC010329.3 CTD-2626G11 fin JGI 12455 99.823 8 green simple sequence in gap
AC010329.3 CTD-2626G11 fin JGI AC008739.5 CTD-2542C24 fin JGI 31434 100 2 green simple sequence in gap
AC008739.5 CTD-2542C24 fin JGI AC012627.4 CTD-2130K10 fin JGI 26017 100 0 green  
AC012627.4 CTD-2130K10 fin JGI AC010620.4 CTD-3233P19 fin JGI 15495 100 0 green  
AC010620.4 CTD-3233P19 fin JGI AC006485.1 LLNLR-260B6 fin JGI 9505 99.968 1 green simple sequence in gap
AC006485.1 LLNLR-260B6 fin JGI AC022432.5 CTD-3030D20 fin JGI 15328 99.811 14 green simple sequence in gap
AC022432.5 CTD-3030D20 fin JGI AC010615.9 CTD-2561J22 fin JGI 29691 100 2 green simple sequence in gap
AC010615.9 CTD-2561J22 fin JGI AC123912.1 RP11-678G14 fin JGI 15474 99.670 18 green simple sequence in gap
AC123912.1 RP11-678G14 fin JGI AC092364.3 RP11-420K14 fin JGI 9722 100 0 green  
AC092364.3 RP11-420K14 fin JGI AC010617.8 CTD-2607J13 fin JGI 426 100 0 yellow half-dovetail of >0bp and <=50bp; alignment length < 2000
AC010617.8 CTD-2607J13 fin JGI AC003973.1 ? fin 21405 99.846 8 green simple sequence in gap
AC003973.1 ? fin AC011482.4 CTB-135N1 fin JGI 22340 99.723 12 green simple sequence in gap
AC011482.4 CTB-135N1 fin JGI AC073539.3 RP11-157B13 fin JGI 43861 99.984 2 green simple sequence in gap
AC073539.3 RP11-157B13 fin JGI AC011494.2 CTB-31C7 fin JGI 24712 99.943 12 green simple sequence in gap
AC011494.2 CTB-31C7 fin JGI AC011516.3 LLNLF-163G11 fin JGI 2137 99.813 1 green  
AC011516.3 LLNLF-163G11 fin JGI AC025811.1 LLNLR-300C8 fin JGI 6001 100 0 green  
AC025811.1 LLNLR-300C8 fin JGI AC004004.1 LLNLR-287G4 fin JGI 489 100 0 green  
AC004004.1 LLNLR-287G4 fin JGI AC011467.7 CTC-457E21 fin JGI 8895 99.944 2 green simple sequence in gap
AC011467.7 CTC-457E21 fin JGI AC024563.6 CTC-451A6 fin JGI 90496 99.987 8 green simple sequence in gap
AC024563.6 CTC-451A6 fin JGI AC008626.6 CTB-159G17 fin JGI 73823 99.991 5 green simple sequence in gap
AC008626.6 CTB-159G17 fin JGI AC022145.8 CTD-2579N5 fin JGI 35759 99.994 2 green simple sequence in gap
AC022145.8 CTD-2579N5 fin JGI AC011502.7 CTB-87J17 fin JGI 14618 99.733 13 green simple sequence in gap
AC011502.7 CTB-87J17 fin JGI AC074135.3 CTD-2291D10 fin JGI 15890 99.994 1 green simple sequence in gap
AC074135.3 CTD-2291D10 fin JGI AC124856.2 RP11-369G6 fin JGI 8087 99.951 3 green simple sequence in gap
AC124856.2 RP11-369G6 fin JGI AC092329.3 RP11-15H20 fin JGI 6941 99.928 1 green simple sequence in gap
AC092329.3 RP11-15H20 fin JGI AC010300.8 CTB-176F20 fin JGI 28640 99.794 10 yellow >0 gap of 25bp or more, not simple sequence
AC010300.8 CTB-176F20 fin JGI AC016628.6 LLNLR-266C8 fin JGI 29830 99.963 4 green simple sequence in gap
AC016628.6 LLNLR-266C8 fin JGI AC093058.2 LLNLF-177E2 fin JGI 1365 100 0 green  
AC093058.2 LLNLF-177E2 fin JGI AC022409.7 CTB-175P5 fin JGI 2084 100 0 green  
AC022409.7 CTB-175P5 fin JGI AC074140.5 LLNLF-18A12 fin JGI 1230 99.919 0 green  
AC074140.5 LLNLF-18A12 fin JGI AC011493.5 CTB-28I9 fin JGI 7656 99.935 0 green  
AC011493.5 CTB-28I9 fin JGI AC073544.4 RP11-359H18 fin JGI 29535 99.749 18 green simple sequence in gap
AC073544.4 RP11-359H18 fin JGI AC139769.1 RP11-255H23 fin JGI 13866 100 0 green  
AC139769.1 RP11-255H23 fin JGI AC011503.4 CTB-92J24 fin JGI 25362 99.341 32 yellow identity < 99.6%
AC011503.4 CTB-92J24 fin JGI AC011543.4 LLNLR-264C1 fin JGI 1963 100 0 green  
AC011543.4 LLNLR-264C1 fin JGI AC092279.2 CTD-2017D11 fin JGI 3981 100 0 green  
AC092279.2 CTD-2017D11 fin JGI AC073534.4 CTD-2027I19 fin JGI 8319 100 0 green  
AC073534.4 CTD-2027I19 fin JGI AC073535.3 CTD-2037K13 fin JGI 36921 100 0 green  
AC073535.3 CTD-2037K13 fin JGI AC073541.4 RP11-21H14 fin JGI 51463 99.850 5 green simple sequence in gap
AC010517.3 LLNLR-255F4 fin JGI AC125386.1 LLNLR-243A6 fin JGI 22153 100 0 green  
AC125386.1 LLNLR-243A6 fin JGI AC125307.1 LLNLF-151D11 fin JGI 3864 100 0 green  
AC125307.1 LLNLF-151D11 fin JGI AC008979.8 LLNLF-152D8 fin JGI 21658 100 0 green  
AC008979.8 LLNLF-152D8 fin JGI AC010516.4 LLNLR-251C10 fin JGI 9958 100 0 green  
AC010516.4 LLNLR-251C10 fin JGI AC008510.9 CTC-452L11 fin JGI 20275 99.896 1 green simple sequence in gap
AC008510.9 CTC-452L11 fin JGI AC124608.1 RP11-620G10 fin JGI 9600 99.802 1 green simple sequence in gap
AC124608.1 RP11-620G10 fin JGI AC112702.3 CTB-151G24 fin JGI 18207 99.890 2 green simple sequence in gap
AC112702.3 CTB-151G24 fin JGI AC004164.1 LLNLR-224D6 fin JGI 18564 99.989 0 green  
AC004164.1 LLNLR-224D6 fin JGI AC006118.1 ? fin JGI 21361 100 0 green  
AC006118.1 ? fin JGI AC006504.1 CTC-459F4 fin JGI 1827 99.781 0 green  
AC006504.1 CTC-459F4 fin JGI AC005758.1 LLNLR-240A2 fin JGI 14521 99.883 4 green simple sequence in gap
AC005758.1 LLNLR-240A2 fin JGI AC093031.1 LLNLF-161E6 fin JGI 1420 100 0 green  
AC093031.1 LLNLF-161E6 fin JGI AC005357.1 LLNLF-121G1 fin JGI 2445 100 0 green  
AC005357.1 LLNLF-121G1 fin JGI AC022153.5 LLNLF-65H9 fin JGI 10091 100 0 green  
AC022153.5 LLNLF-65H9 fin JGI AC020944.4 LLNLF-123D5 fin JGI 6271 100 0 green  
AC020944.4 LLNLF-123D5 fin JGI AC012319.6 LLNLF-67E10 fin JGI 7980 100 0 green  
AC012319.6 LLNLF-67E10 fin JGI AC010511.6 LLNLF-195A6 fin JGI 4340 100 0 green  
AC010511.6 LLNLF-195A6 fin JGI AC010365.5 CTD-2043I16 fin JGI 4928 99.736 4 green simple sequence in gap
AC010365.5 CTD-2043I16 fin JGI AC020905.9 CTB-70G10 fin JGI 23541 99.822 9 green simple sequence in gap
AC020905.9 CTB-70G10 fin JGI AC005780.1 LLNLF-189A1 fin JGI 19126 99.775 5 green simple sequence in gap
AC005780.1 LLNLF-189A1 fin JGI AC005580.1 LLNLF-109C2 fin JGI 1433 100 0 green  
AC005580.1 LLNLF-109C2 fin JGI AC093074.2 LLNLR-277F11 fin JGI 1358 100 0 green  
AC093074.2 LLNLR-277F11 fin JGI AC005307.1 LLNLR-221E1 fin JGI 1440 100 0 green  
AC005307.1 LLNLR-221E1 fin JGI AC093070.3 LLNLR-261A11 fin JGI 1370 100 0 green  
AC093070.3 LLNLR-261A11 fin JGI AC005381.1 LLNLF-156D10 fin JGI 1388 100 0 green  
AC005381.1 LLNLF-156D10 fin JGI AC093068.2 LLNLR-247E8 fin JGI 1547 100 0 green  
AC093068.2 LLNLR-247E8 fin JGI AC005616.1 LLNLR-275F8 fin JGI 1249 100 0 green  
AC005616.1 LLNLR-275F8 fin JGI AC005380.1 LLNLF-13A4 fin JGI 4103 100 0 green  
AC005380.1 LLNLF-13A4 fin JGI AC005394.1 LLNLF-37F2 fin JGI 1161 100 0 green  
AC005394.1 LLNLF-37F2 fin JGI AC079466.3 LLNLF-216B5 fin JGI 13627 100 0 green  
AC079466.3 LLNLF-216B5 fin JGI AC007206.1 ? fin JGI 26940 100 2 green simple sequence in gap
AC007206.1 ? fin JGI AC005579.1 LLNLF-176F6 fin JGI 8170 100 0 green  
AC005579.1 LLNLF-176F6 fin JGI AC093057.2 LLNLF-169H5 fin JGI 1404 100 0 green  
AC093057.2 LLNLF-169H5 fin JGI AC005524.1 LLNLR-262H9 fin JGI 1314 100 0 green  
AC005524.1 LLNLR-262H9 fin JGI AC090428.3 LLNLF-201F6 fin JGI 10182 100 0 green  
AC090428.3 LLNLF-201F6 fin JGI AC016046.1 LLNLF-215D3 fin JGI 8091 100 0 green  
AC016046.1 LLNLF-215D3 fin JGI AC008530.7 CTC-478M6 fin JGI 17204 99.907 5 green simple sequence in gap
AC008530.7 CTC-478M6 fin JGI AC007795.1 LLNLF-151B3 fin JGI 431 99.536 0 yellow identity < 99.6%
AC007795.1 LLNLF-151B3 fin JGI AC008991.8 LLNLF-58H11 fin JGI 1149 100 0 green  
AC008991.8 LLNLF-58H11 fin JGI AC093079.3 LLNLF-7C11 fin JGI 2539 100 0 green  
AC093079.3 LLNLF-7C11 fin JGI AC011524.6 LLNLF-89E10 fin JGI 2238 100 0 green  
AC011524.6 LLNLF-89E10 fin JGI AC011505.6 CTD-2081K17 fin JGI 401 100 0 green  
AC011505.6 CTD-2081K17 fin JGI AC007786.1 CTB-32O4 fin ! 33983 99.982 2 green simple sequence in gap
AC007786.1 CTB-32O4 fin ! AC007759.1 LLNLR-237E10 fin JGI 12639 100 0 green  
AC007759.1 LLNLR-237E10 fin JGI AC006134.1 LLNLF-98A7 fin JGI 914 100 0 green  
AC006134.1 LLNLF-98A7 fin JGI AC011474.6 CTC-525D6 fin JGI 4594 99.978 1 green  
AC011474.6 CTC-525D6 fin JGI AC098786.2 LLNLR-258C11 fin JGI 1402 99.857 0 green  
AC098786.2 LLNLR-258C11 fin JGI AC010505.6 LLNLF-119C9 fin JGI 1229 100 0 green  
AC010505.6 LLNLF-119C9 fin JGI AC010512.7 LLNLR-226F1 fin JGI 4923 100 0 green  
AC010512.7 LLNLR-226F1 fin JGI AC010644.7 LLNLR-258B1 fin JGI 2283 100 0 green  
AC010644.7 LLNLR-258B1 fin JGI AC010513.6 LLNLR-232H11 fin JGI 2193 100 0 green  
AC010513.6 LLNLR-232H11 fin JGI AC008989.6 LLNLF-219B11 fin JGI 2182 100 0 green  
AC008989.6 LLNLF-219B11 fin JGI AC008798.10 CTD-2057D4 fin JGI 4175 100 1 green simple sequence in gap
AC008798.10 CTD-2057D4 fin JGI AC008507.11 CTC-448F2 fin JGI 6267 99.761 3 green simple sequence in gap
AC008507.11 CTC-448F2 fin JGI AC098780.2 LLNLR-229A12 fin JGI 1225 100 1 green  
AC098780.2 LLNLR-229A12 fin JGI AC006541.1 LLNLR-257D9 fin JGI 1506 100 0 green  
AC006541.1 LLNLR-257D9 fin JGI AC006131.1 ? fin JGI 3179 100 0 green  
AC006131.1 ? fin JGI AC005760.1 LLNLR-273A6 fin JGI 3551 100 0 green  
AC005760.1 LLNLR-273A6 fin JGI AC005597.1 LLNLR-241C3 fin JGI 1209 100 0 green  
AC005597.1 LLNLR-241C3 fin JGI AC005596.1 LLNLR-248B12 fin JGI 7143 100 0 green  
AC005596.1 LLNLR-248B12 fin JGI AC093035.1 LLNLR-260D10 fin JGI 1343 100 0 green  
AC093035.1 LLNLR-260D10 fin JGI AC006506.1 LLNLF-211G1 fin JGI 2201 100 0 green  
AC006506.1 LLNLF-211G1 fin JGI AC011454.6 CTC-347E6 fin JGI 4670 99.936 2 green simple sequence in gap
AC011454.6 CTC-347E6 fin JGI AC011504.3 CTD-2001J20 fin JGI 21398 99.921 8 green simple sequence in gap
AC011504.3 CTD-2001J20 fin JGI AC093065.2 CTD-2370J16 fin JGI 1465 100 0 green  
AC093065.2 CTD-2370J16 fin JGI AC011478.3 CTC-565M22 fin JGI 1029 100 0 green  
AC011478.3 CTC-565M22 fin JGI AC093034.1 LLNLR-249F8 fin JGI 1478 100 0 green  
AC093034.1 LLNLR-249F8 fin JGI AC011532.7 LLNLR-232E11 fin JGI 1775 100 0 green  
AC011532.7 LLNLR-232E11 fin JGI AC007758.1 LLNLF-193A7 fin JGI 12191 100 0 green  
AC007758.1 LLNLF-193A7 fin JGI AC011507.3 CTD-2131C11 fin JGI 7418 99.987 1 yellow half-dovetail of >0bp and <=50bp
AC011507.3 CTD-2131C11 fin JGI AC020897.7 CTC-400I9 fin JGI 16401 99.969 2 green simple sequence in gap
AC020897.7 CTC-400I9 fin JGI AC020912.6 CTD-2583G20 fin JGI 12151 100 0 green  
AC020912.6 CTD-2583G20 fin JGI AC020952.5 LLNLR-263F3 fin JGI 19137 99.901 4 green simple sequence in gap
AC020952.5 LLNLR-263F3 fin JGI AC025809.5 CTC-439O9 fin JGI 5868 99.881 2 green simple sequence in gap
AC025809.5 CTC-439O9 fin JGI AC007796.1 LLNLF-2B11 fin JGI 15066 99.622 4 green simple sequence in gap
AC007796.1 LLNLF-2B11 fin JGI AC008992.7 LLNLF-95F7 fin JGI 5980 100 0 green  
AC008992.7 LLNLF-95F7 fin JGI AC008794.8 CTD-2050I18 fin JGI 14770 99.953 1 green simple sequence in gap
AC008794.8 CTD-2050I18 fin JGI AC011525.4 LLNLR-221E11 fin JGI 2610 100 0 green  
AC011525.4 LLNLR-221E11 fin JGI AC011535.7 LLNLR-243C6 fin JGI 3771 100 0 green  
AC011535.7 LLNLR-243C6 fin JGI AC011546.6 LLNLR-271E2 fin JGI 5601 100 0 green  
AC011546.6 LLNLR-271E2 fin JGI AC011528.3 LLNLR-227D12 fin JGI 177 100 0 green  
AC011528.3 LLNLR-227D12 fin JGI AC011459.5 CTC-416D1 fin JGI 2364 100 0 green  
AC011459.5 CTC-416D1 fin JGI AC011463.7 CTC-442E9 fin JGI 15534 100 3 green simple sequence in gap
AC011463.7 CTC-442E9 fin JGI AC098788.2 CTC-268A21 fin JGI 2085 100 0 green  
AC098788.2 CTC-268A21 fin JGI AC011456.2 CTC-360P9 fin JGI 1700 100 0 green  
AC011456.2 CTC-360P9 fin JGI AC005547.1 LLNLR-253C12 fin JGI 34671 99.986 3 green simple sequence in gap
AC005547.1 LLNLR-253C12 fin JGI AC092475.1 LLNLF-174H6 fin JGI 1339 100 0 green  
AC092475.1 LLNLF-174H6 fin JGI AC005265.1 LLNLF-154F2 fin JGI 1574 100 0 green  
AC005265.1 LLNLF-154F2 fin JGI AC011518.6 LLNLF-189G12 fin JGI 3508 100 0 green  
AC011518.6 LLNLF-189G12 fin JGI AC104529.2 LLNLF-25B2 fin JGI 2489 100 0 green  
AC104529.2 LLNLF-25B2 fin JGI AC005266.1 LLNLF-193C9 fin JGI 4125 100 0 green  
AC005266.1 LLNLF-193C9 fin JGI AC074139.4 LLNLF-144G11 fin JGI 16964 100 1 green simple sequence in gap
AC074139.4 LLNLF-144G11 fin JGI AC005934.1 LLNLR-269H1 fin JGI 14365 99.986 0 green  
AC005934.1 LLNLR-269H1 fin JGI AC005340.1 LLNLF-152D12 fin JGI 15513 100 0 green  
AC005340.1 LLNLF-152D12 fin JGI AC005953.1 LLNLR-223D1 fin JGI 9892 100 0 green  
AC005953.1 LLNLR-223D1 fin JGI AC007773.1 ? fin T¥ 10425 99.904 1 green simple sequence in gap
AC007773.1 ? fin T¥ AC005382.1 CTC-325L16 fin JGI 12556 99.976 2 green simple sequence in gap
AC005382.1 CTC-325L16 fin JGI AC005621.1 LLNLF-130H8 fin JGI 8598 100 0 green  
AC005621.1 LLNLF-130H8 fin JGI AC008474.9 CTC-379B2 fin JGI 19340 99.933 3 green simple sequence in gap
AC008474.9 CTC-379B2 fin JGI AC008736.6 CTD-2538C1 fin JGI 67889 99.813 35 green simple sequence in gap
AC008736.6 CTD-2538C1 fin JGI AC008805.8 CTD-2085J24 fin JGI 20409 100 1 green simple sequence in gap
AC008805.8 CTD-2085J24 fin JGI AC119048.2 LLNLR-229E4 fin JGI 2603 100 1 green simple sequence in gap
AC119048.2 LLNLR-229E4 fin JGI AC011449.6 CTC-263F14 fin JGI 2248 99.867 0 green  
AC011449.6 CTC-263F14 fin JGI AC093069.2 CTD-2598B6 fin JGI 1131 99.646 0 green  
AC093069.2 CTD-2598B6 fin JGI AC008521.5 CTC-461H2 fin JGI 1019 99.902 1 green simple sequence in gap
AC008521.5 CTC-461H2 fin JGI AC008738.7 CTD-2540B15 fin JGI 33355 99.979 6 green simple sequence in gap
AC008738.7 CTD-2540B15 fin JGI AC008744.6 CTD-2561O20 fin JGI 47708 100 1 green  
AC008744.6 CTD-2561O20 fin JGI AC010485.6 CTD-2329C7 fin JGI 21571 99.954 0 green  
AC010485.6 CTD-2329C7 fin JGI AC010510.6 LLNLF-191G6 fin JGI 890 100 0 green  
AC010510.6 LLNLF-191G6 fin JGI AC008994.3 LLNLR-232F9 fin JGI 3682 100 0 green  
AC008994.3 LLNLR-232F9 fin JGI AC007205.1 ? fin JGI 13870 100 2 green  
AC007205.1 ? fin JGI AC011519.7 LLNLF-192H5 fin JGI 3766 100 0 green  
AC011519.7 LLNLF-192H5 fin JGI AC005615.1 LLNLR-241B6 fin JGI 3401 100 0 green  
AC005615.1 LLNLR-241B6 fin JGI AC008556.5 CTC-526N19 fin JGI 5041 100 0 green  
AC008556.5 CTC-526N19 fin JGI AC005792.1 ? fin JGI 9961 100 0 green  
AC005792.1 ? fin JGI AC016587.9 CTD-2632B17 fin JGI 9413 100 0 green  
AC016587.9 CTD-2632B17 fin JGI AC010614.8 CTD-2518G19 fin JGI 9904 100 0 green  
AC010614.8 CTD-2518G19 fin JGI AC092080.2 CTD-2094A2 fin JGI 23573 100 2 green simple sequence in gap
AC092080.2 CTD-2094A2 fin JGI AC016627.6 LLNLR-251F1 fin JGI 35050 99.917 15 green simple sequence in gap
AC016627.6 LLNLR-251F1 fin JGI AC010504.7 LLNLF-116B1 fin JGI 4349 100 0 green  
AC010504.7 LLNLF-116B1 fin JGI AC092073.2 RP11-618P17 fin JGI 10101 99.901 1 green  
AC092073.2 RP11-618P17 fin JGI AC008747.5 CTD-2588C8 fin JGI 12164 99.942 8 green simple sequence in gap
AC008747.5 CTD-2588C8 fin JGI AC022143.7 CTD-2378H7 fin JGI 47635 100 0 green  
AC022143.7 CTD-2378H7 fin JGI AC020910.7 CTD-2553L13 fin JGI 24713 99.858 9 green simple sequence in gap
AC020910.7 CTD-2553L13 fin JGI AC008555.5 CTC-523E23 fin JGI 10023 99.920 2 green simple sequence in gap
AC008555.5 CTC-523E23 fin JGI AC020907.6 CTD-2527I21 fin JGI 3982 99.874 1 green simple sequence in gap
AC020907.6 CTD-2527I21 fin JGI AC002390.1 LLNLR-262B4 fin JGI 2237 99.955 0 green  
AC002390.1 LLNLR-262B4 fin JGI AC002128.1 LLNLF-151A10 fin JGI 5918 100 1 green simple sequence in gap
AC002128.1 LLNLF-151A10 fin JGI AD000684.1 LLNLR-270E7 unk JGI 12838 100 2 green  
AD000684.1 LLNLR-270E7 unk JGI AC002132.1 LLNLF-200A4 fin JGI 4235 100 0 green  
AC002132.1 LLNLF-200A4 fin JGI U62631.2 LLNLF-122B4 fin JGI 2568 100 0 green  
U62631.2 LLNLF-122B4 fin JGI AC002511.1 LLPAC-136A2 fin JGI 6860 99.912 2 green simple sequence in gap
AC002511.1 LLPAC-136A2 fin JGI AC002997.1 LLNLR-226F7 fin JGI 17301 99.988 1 green  
AC002997.1 LLNLR-226F7 fin JGI AD001502.1 LLNLF-172A10 unk JGI 6757 100 1 green simple sequence in gap
AD001502.1 LLNLF-172A10 unk JGI AC138125.1 LLNLR-228H6 fin JGI 2920 100 0 green  
AC138125.1 LLNLR-228H6 fin JGI AC002389.1 LLNLR-245D1 fin >? 8466 100 0 green  
AC002389.1 LLNLR-245D1 fin >? AD000090.1 LLNLF-96A1 unk JGI 15518 99.994 1 green  
AD000090.1 LLNLF-96A1 unk JGI AC002115.1 LLNLR-275H8 fin JGI 4180 100 0 green  
AC002115.1 LLNLR-275H8 fin JGI AC002314.1 LLNLR-241A12 fin JGI 7864 100 0 green  
AC002314.1 LLNLR-241A12 fin JGI AD000671.1 LLNLF-200A5 unk JGI 9551 100 1 green  
AD000671.1 LLNLF-200A5 unk JGI AC002398.1 LLNLF-219D1 fin JGI 344 100 1 yellow alignment length < 2000
AC002398.1 LLNLF-219D1 fin JGI U95090.1 LLNLF-152D9 fin JGI 1629 100 0 green  
U95090.1 LLNLF-152D9 fin JGI AC002133.1 LLNLR-297H2 fin JGI 12246 100 0 green  
AC002133.1 LLNLR-297H2 fin JGI AD000864.1 LLNLR-241A11 unk JGI 665 100 0 yellow alignment length < 2000
AD000864.1 LLNLR-241A11 unk JGI AD000833.1 LLNLF-150H11 unk JGI 3077 100 0 green  
AD000833.1 LLNLF-150H11 unk JGI AF038458.1 LLNLR-280H6 fin JGI 4338 100 0 green  
AF038458.1 LLNLR-280H6 fin JGI AC002116.1 ? fin JGI 8078 99.975 0 green  
AC002116.1 ? fin JGI AD000813.1 LLNLR-276H7 unk JGI 8475 100 0 yellow half-dovetail of >0bp and <=50bp
AD000813.1 LLNLR-276H7 unk JGI AC004144.1 LLNLR-247H7 fin JGI 5528 100 0 green  
AC004144.1 LLNLR-247H7 fin JGI AD001527.1 LLNLF-205A6 unk JGI 2310 100 0 green  
AD001527.1 LLNLF-205A6 unk JGI AC002984.1 LLNLR-301E5 fin JGI 17077 100 0 green  
AC002984.1 LLNLR-301E5 fin JGI AC008848.9 CTD-2168K3 fin JGI 11955 99.941 3 green simple sequence in gap
AC008848.9 CTD-2168K3 fin JGI AC012617.7 CTD-2661O12 fin JGI 17982 99.833 18 green simple sequence in gap
AC012617.7 CTD-2661O12 fin JGI AC092296.2 CTD-3162L10 fin JGI 28229 99.674 19 green simple sequence in gap
AC092296.2 CTD-3162L10 fin JGI AC092295.2 CTD-2630F21 fin JGI 6195 100 0 green  
AC092295.2 CTD-2630F21 fin JGI AC074138.5 CTD-3234P18 fin JGI 72813 99.907 26 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC074138.5 CTD-3234P18 fin JGI AC020928.7 CTD-2162K18 fin JGI 7410 99.906 6 green simple sequence in gap
AC020928.7 CTD-2162K18 fin JGI AC008733.9 CTD-2525J15 fin JGI 22844 99.956 8 green simple sequence in gap
AC008733.9 CTD-2525J15 fin JGI AC010632.7 CTD-2293H3 fin JGI 11274 100 1 green  
AC010632.7 CTD-2293H3 fin JGI AC012309.8 CTC-454I21 fin JGI 30184 99.997 4 green simple sequence in gap
AC012309.8 CTC-454I21 fin JGI AC016590.7 CTD-3220F14 fin JGI 13285 99.932 2 green simple sequence in gap
AC016590.7 CTD-3220F14 fin JGI AC008806.4 CTD-2086O20 fin JGI 7498 99.987 1 green simple sequence in gap
AC008806.4 CTD-2086O20 fin JGI AC022148.6 CTD-3064H18 fin JGI 17106 99.994 3 green simple sequence in gap
AC022148.6 CTD-3064H18 fin JGI AC093227.3 CTD-2528L19 fin JGI 32882 99.921 13 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC093227.3 CTD-2528L19 fin JGI AC016582.9 CTD-2554C21 fin JGI 8691 100 0 green  
AC016582.9 CTD-2554C21 fin JGI AC008395.6 CTC-244M17 fin JGI 5941 100 0 green  
AC008395.6 CTC-244M17 fin JGI AC098790.2 LLNLR-270D8 fin JGI 1055 99.810 1 green simple sequence in gap
AC098790.2 LLNLR-270D8 fin JGI AC011465.4 CTC-450M9 fin JGI 1479 99.797 1 green simple sequence in gap
AC011465.4 CTC-450M9 fin JGI AC011479.7 CTB-102L5 fin JGI 40654 99.909 15 green simple sequence in gap
AC011479.7 CTB-102L5 fin JGI AC026806.5 LLNLR-271E7 fin JGI 12929 99.992 1 green simple sequence in gap
AC026806.5 LLNLR-271E7 fin JGI AC005625.1 LLNLR-233E8 fin JGI 14029 100 0 green  
AC005625.1 LLNLR-233E8 fin JGI AC005789.1 LLNLF-10H12 fin JGI 4631 100 0 green  
AC005789.1 LLNLF-10H12 fin JGI AC093076.3 LLNLR-282F7 fin JGI 1555 100 0 green  
AC093076.3 LLNLR-282F7 fin JGI AC011469.6 CTC-475D23 fin JGI 1025 100 0 green  
AC011469.6 CTC-475D23 fin JGI AC067969.1 ? fin JGI 5277 99.981 1 green  
AC067969.1 ? fin JGI AC005933.1 LLNLF-110A8 fin JGI 3996 99.675 4 green  
AC005933.1 LLNLF-110A8 fin JGI AC008649.8 CTB-186G2 fin JGI 6214 99.678 0 green  
AC008649.8 CTB-186G2 fin JGI AC022144.8 CTD-2540F13 fin JGI 54822 99.994 3 green simple sequence in gap
AC022144.8 CTD-2540F13 fin JGI AC104534.2 LLNLR-280D8 fin JGI 7252 99.821 1 green simple sequence in gap
AC104534.2 LLNLR-280D8 fin JGI AC008982.5 LLNLF-172E10 fin JGI 16021 100 0 green  
AC008982.5 LLNLF-172E10 fin JGI AC011455.6 CTC-360G5 fin JGI 7848 99.822 1 green simple sequence in gap
AC011455.6 CTC-360G5 fin JGI AC093036.1 LLNLR-262B9 fin JGI 1775 99.831 0 green  
AC093036.1 LLNLR-262B9 fin JGI AC010605.4 CTB-189B5 fin JGI 1453 100 0 green  
AC010605.4 CTB-189B5 fin JGI AC011443.6 CTC-218B8 fin JGI 20255 99.738 15 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC011443.6 CTC-218B8 fin JGI AC125785.2 CTB-14B11 fin JGI 1511 99.934 1 green simple sequence in gap
AC125785.2 CTB-14B11 fin JGI AC011445.6 CTC-246B18 fin JGI 719 100 0 green  
AC011445.6 CTC-246B18 fin JGI AC005239.1 LLNLF-190A5 fin JGI 2058 100 0 green  
AC005239.1 LLNLF-190A5 fin JGI AC104106.2 LLNLR-223E7 fin JGI 6755 100 0 green  
AC104106.2 LLNLR-223E7 fin JGI AC011500.7 CTB-60E11 fin JGI 4795 99.791 2 green simple sequence in gap
AC011500.7 CTB-60E11 fin JGI AC005205.1 LLNLF-179B5 fin JGI 7556 99.616 6 green simple sequence in gap
AC005205.1 LLNLF-179B5 fin JGI AC005176.1 LLNLF-172B3 fin JGI 4660 100 0 green  
AC005176.1 LLNLF-172B3 fin JGI AC093051.2 LLNLF-125D3 fin JGI 1989 100 0 yellow alignment length < 2000
AC093051.2 LLNLF-125D3 fin JGI AC005515.1 LLNLF-150D6 fin JGI 2184 100 0 green  
AC005515.1 LLNLF-150D6 fin JGI AC093063.2 LLNLR-230E9 fin JGI 1004 100 0 green  
AC093063.2 LLNLR-230E9 fin JGI AC006133.1 ? fin JGI 1378 100 0 green  
AC006133.1 ? fin JGI AC005393.1 LLNLR-268E12 fin JGI 19212 99.610 7 green simple sequence in gap
AC005393.1 LLNLR-268E12 fin JGI AC006950.1 CTC-470N8 fin JGI 8008 99.963 0 green  
AC006950.1 CTC-470N8 fin JGI AC011536.6 LLNLR-245D11 fin JGI 7385 100 0 green  
AC011536.6 LLNLR-245D11 fin JGI AC007842.1 CTC-471F3 fin JGI 9481 99.209 8 red >0 gap of 500bp or more, not simple sequence
AC007842.1 CTC-471F3 fin JGI AC005614.1 LLNLF-191C5 fin JGI 7041 100 0 green  
AC005614.1 LLNLF-191C5 fin JGI AC011496.7 CTB-3M11 fin JGI 448 100 0 green  
AC011496.7 CTB-3M11 fin JGI AC118344.2 CTC-425O23 fin JGI 3276 100 0 green  
AC118344.2 CTC-425O23 fin JGI AC010271.8 CTC-492K19 fin JGI 63794 99.892 21 green simple sequence in gap
AC010271.8 CTC-492K19 fin JGI AC020929.6 CTD-2223D2 fin JGI 1745 99.885 0 green  
AC020929.6 CTD-2223D2 fin JGI AC010412.9 CTD-2166J9 fin JGI 3784 100 0 green  
AC010412.9 CTD-2166J9 fin JGI AC098782.2 LLNLR-237A1 fin JGI 1016 100 0 green  
AC098782.2 LLNLR-237A1 fin JGI AC020945.6 LLNLF-72H9 fin JGI 681 100 0 green  
AC020945.6 LLNLF-72H9 fin JGI AC098779.2 CTD-2276I23 fin JGI 1676 99.821 0 green  
AC098779.2 CTD-2276I23 fin JGI AC008537.5 CTC-490E21 fin JGI 1168 99.829 0 green  
AC008537.5 CTC-490E21 fin JGI AC092071.2 LLNLF-132C3 fin JGI 3136 99.713 1 green  
AC092071.2 LLNLF-132C3 fin JGI AC011541.7 LLNLR-258F7 fin JGI 2605 100 0 green  
AC011541.7 LLNLR-258F7 fin JGI AC023172.1 LLNLF-181H12 fin JGI 6380 100 0 green  
AC023172.1 LLNLF-181H12 fin JGI AC008962.9 CTD-2356P16 fin JGI 8072 99.988 0 green  
AC008962.9 CTD-2356P16 fin JGI AC011510.7 CTD-2195B23 fin JGI 4297 99.884 5 yellow >0 gap of 25bp or more, not simple sequence
AC011510.7 CTD-2195B23 fin JGI AC011462.4 CTC-435M10 fin JGI 18731 99.995 0 green  
AC011462.4 CTC-435M10 fin JGI AC011526.7 LLNLR-224F1 fin JGI 12936 99.845 12 green simple sequence in gap
AC011526.7 LLNLR-224F1 fin JGI AC005945.1 LLNLR-236F5 fin JGI 264 100 0 green  
AC005945.1 LLNLR-236F5 fin JGI AC005795.1 LLNLF-164A1 fin JGI 14696 100 0 green  
AC005795.1 LLNLF-164A1 fin JGI AC006129.1 ? fin JGI 5380 100 0 green  
AC006129.1 ? fin JGI AC005626.1 LLNLR-252C4 fin JGI 6184 100 0 green  
AC005626.1 LLNLR-252C4 fin JGI AC005955.1 LLNLR-282H5 fin JGI 3076 100 0 green  
AC005955.1 LLNLR-282H5 fin JGI AC005794.1 LLNLF-207H6 fin JGI 5578 100 0 green  
AC005794.1 LLNLF-207H6 fin JGI AC005797.1 LLNLF-92H5 fin JGI 8688 100 0 green  
AC005797.1 LLNLF-92H5 fin JGI AC098796.2 LLNLF-92D5 fin JGI 1431 100 0 green  
AC098796.2 LLNLF-92D5 fin JGI AC008999.7 LLNLR-269B9 fin JGI 1284 100 0 green  
AC008999.7 LLNLR-269B9 fin JGI AC011513.2 LLNLF-112E5 fin JGI 3938 100 0 green  
AC011513.2 LLNLF-112E5 fin JGI AC022516.5 LLNLF-192G3 fin JGI 1535 100 0 green  
AC022516.5 LLNLF-192G3 fin JGI AC020956.8 LLNLR-308B2 fin JGI 1497 100 0 green  
AC020956.8 LLNLR-308B2 fin JGI AC010616.5 CTD-2575K13 fin JGI 14204 99.993 2 green simple sequence in gap
AC010616.5 CTD-2575K13 fin JGI AC020946.4 LLNLF-76F6 fin JGI 10318 99.971 2 green simple sequence in gap
AC020946.4 LLNLF-76F6 fin JGI AC022515.5 CTB-59C6 fin JGI 6509 99.969 0 green  
AC022515.5 CTB-59C6 fin JGI AC024076.4 LLNLF-112A4 fin JGI 9392 100 2 green simple sequence in gap
AC024076.4 LLNLF-112A4 fin JGI AC010247.9 CTC-378H22 fin JGI 15059 99.993 0 green  
AC010247.9 CTC-378H22 fin JGI AC098778.2 CTD-2253J5 fin JGI 1236 100 0 green  
AC098778.2 CTD-2253J5 fin JGI AC006486.1 ? fin JGI 1243 100 0 green  
AC006486.1 ? fin JGI AC024078.4 LLNLR-240B5 fin JGI 13707 100 1 yellow half-dovetail of >0bp and <=50bp
AC024078.4 LLNLR-240B5 fin JGI AC011497.6 CTB-50E14 fin JGI 13429 100 1 green  
AC011497.6 CTB-50E14 fin JGI AC004785.1 ? fin JGI 5777 100 0 green  
AC004785.1 ? fin JGI AC104105.2 LLNLF-161F8 fin JGI 1099 100 0 green  
AC104105.2 LLNLF-161F8 fin JGI AC004559.1 LLNLF-52D1 fin JGI 1241 100 0 green  
AC004559.1 LLNLF-52D1 fin JGI AC093030.1 LLNLF-160D10 fin JGI 1457 100 0 green  
AC093030.1 LLNLF-160D10 fin JGI AC004558.1 LLNLF-42F2 fin JGI 1912 100 0 green  
AC004558.1 LLNLF-42F2 fin JGI AC005204.1 LLNLF-199G3 fin JGI 8357 100 0 green  
AC005204.1 LLNLF-199G3 fin JGI AC005337.1 LLNLF-212B1 fin JGI 3169 100 0 green  
AC005337.1 LLNLF-212B1 fin JGI AC004654.1 LLNLF-151C10 fin JGI 260 100 0 green  
AC004654.1 LLNLF-151C10 fin JGI AC004610.1 LLNLF-157A11 fin JGI 1327 100 0 green  
AC004610.1 LLNLF-157A11 fin JGI AC004603.1 LLNLR-297G8 fin JGI 2447 100 0 green  
AC004603.1 LLNLR-297G8 fin JGI AC005238.1 LLNLF-211B1 fin JGI 1662 100 0 green  
AC005238.1 LLNLF-211B1 fin JGI AC093056.2 LLNLF-169A11 fin JGI 1237 100 0 green  
AC093056.2 LLNLF-169A11 fin JGI AC005260.1 LLNLF-174D1 fin JGI 1007 99.901 0 green  
AC005260.1 LLNLF-174D1 fin JGI AC093055.3 LLNLF-157B1 fin JGI 1162 100 0 green  
AC093055.3 LLNLF-157B1 fin JGI AC004679.1 LLNLR-224A11 fin JGI 1222 100 0 green  
AC004679.1 LLNLR-224A11 fin JGI AC005947.1 LLNLR-265C5 fin JGI 3122 100 0 green  
AC005947.1 LLNLR-265C5 fin JGI AC004784.1 LLNLR-224B5 fin JGI 1461 100 0 green  
AC004784.1 LLNLR-224B5 fin JGI AC024077.2 LLNLF-204C10 fin JGI 6690 99.985 0 green  
AC024077.2 LLNLF-204C10 fin JGI AC005791.1 LLNLR-223E11 fin JGI 23787 100 0 green  
AC005791.1 LLNLR-223E11 fin JGI AC093032.1 LLNLF-203A12 fin JGI 1531 100 0 green  
AC093032.1 LLNLF-203A12 fin JGI AC004700.1 LLNLF-99H6 fin JGI 1187 100 0 green  
AC004700.1 LLNLF-99H6 fin JGI AC098787.2 LLNLR-265D3 fin JGI 1174 100 1 green simple sequence in gap
AC098787.2 LLNLR-265D3 fin JGI AC005392.2 CTC-490G23 fin JGI 1329 100 0 green  
AC005392.2 CTC-490G23 fin JGI AC018758.2 CTB-61I7 fin JGI 26805 99.851 5 green simple sequence in gap
AC018758.2 CTB-61I7 fin JGI L34079.2 LLNLF-1E2 unk JGI 4298 99.884 0 green  
L34079.2 LLNLF-1E2 unk JGI AC006276.1 LLNLR-244E3 fin JGI 941 100 0 yellow alignment length < 2000
AC006276.1 LLNLR-244E3 fin JGI AC005525.2 LLNLF-179G2 fin JGI 5655 100 0 green  
AC005525.2 LLNLF-179G2 fin JGI AC006953.1 LLNLR-243G12 fin JGI 1530 100 0 green  
AC006953.1 LLNLR-243G12 fin JGI AC005622.1 LLNLR-271C9 fin JGI 2210 100 0 green  
AC005622.1 LLNLR-271C9 fin JGI AC004780.1 LLNLF-127C7 fin JGI 1548 100 0 green  
AC004780.1 LLNLF-127C7 fin JGI AC011520.3 LLNLF-205H1 fin JGI 23605 100 0 green  
AC011520.3 LLNLF-205H1 fin JGI AC115522.2 LLNLF-149E9 fin JGI 19117 100 1 green  
AC115522.2 LLNLF-149E9 fin JGI AC011508.5 CTD-2160O21 fin JGI 12585 99.746 4 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC011508.5 CTD-2160O21 fin JGI AC006213.1 RP11-15A1 fin WIBR 38777 99.951 8 green simple sequence in gap
AC006213.1 RP11-15A1 fin WIBR AC018725.1 ? fin 37130 99.715 22 green simple sequence in gap
AC018725.1 ? fin AC067968.1 ? fin 2271 100 0 green  
AC067968.1 ? fin AC092072.2 LLNLR-246F7 fin JGI 9182 100 1 green  
AC092072.2 LLNLR-246F7 fin JGI AC084219.2 ? fin 2954 100 0 green  
AC084219.2 ? fin AC114266.2 LLNLF-196D12 fin JGI 563 100 0 green  
AC114266.2 LLNLF-196D12 fin JGI AC021092.1 ? fin 1447 100 0 green  
AC021092.1 ? fin AC138470.1 CTC-204F22 fin JGI 15572 99.968 1 green simple sequence in gap
AC138470.1 CTC-204F22 fin JGI AC092477.1 LLNLR-263C5 fin JGI 1112 100 0 green  
AC092477.1 LLNLR-263C5 fin JGI AC138473.1 CTC-512J12 fin JGI 1359 100 0 green  
AC138473.1 CTC-512J12 fin JGI AC069278.1 ? fin 788 99.492 0 yellow identity < 99.6%
AC069278.1 ? fin AC138472.3 ? fin JGI 6968 99.885 7 green simple sequence in gap
AC138472.3 ? fin JGI AC068948.1 ? fin 9001 99.956 2 green  
AC068948.1 ? fin AC092066.4 CTB-171A8 fin JGI 3994 99.925 3 green simple sequence in gap
AC092066.4 CTB-171A8 fin JGI AC092306.2 LLNLR-231D4 fin JGI 4297 100 0 green  
AC092306.2 LLNLR-231D4 fin JGI AC093232.2 LLNLR-232E3 fin JGI 3050 100 0 green  
AC093232.2 LLNLR-232E3 fin JGI AC011481.4 CTB-129P6 fin JGI 9605 99.594 11 yellow identity < 99.6%
AC011481.4 CTB-129P6 fin JGI AF037338.1 ? unk 10315 99.835 12 yellow half-dovetail of >0bp and <=50bp
AF037338.1 ? unk AC011489.6 CTB-179K24 fin JGI 22009 99.877 16 yellow half-dovetail of >0bp and <=50bp
AC011489.6 CTB-179K24 fin JGI AC005757.1 LLNLR-288E11 fin JGI 149 100 0 green  
AC005757.1 LLNLR-288E11 fin JGI AC005779.1 LLNLR-275B5 fin JGI 10497 100 0 green  
AC005779.1 LLNLR-275B5 fin JGI AC093064.2 LLNLR-232D2 fin JGI 1427 100 0 green  
AC093064.2 LLNLR-232D2 fin JGI AC006126.1 ? fin JGI 1416 99.929 0 green  
AC006126.1 ? fin JGI AC005581.1 LLNLR-274C5 fin JGI 5059 100 0 green  
AC005581.1 LLNLR-274C5 fin JGI AC005781.1 LLNLR-299B12 fin JGI 2468 100 0 green  
AC005781.1 LLNLR-299B12 fin JGI AC112705.2 CTC-315K20 fin JGI 4548 99.978 0 green  
AC112705.2 CTC-315K20 fin JGI L47234.2 LLNLF-211H7 fin JGI 4278 100 1 green  
L47234.2 LLNLF-211H7 fin JGI AC092309.3 LLNLR-276F4 fin JGI 10212 100 0 green  
AC092309.3 LLNLR-276F4 fin JGI AC139353.3 LLNLR-257F11 fin JGI 8489 100 0 green  
AC139353.3 LLNLR-257F11 fin JGI AC138128.1 LLNLF-53H4 fin JGI 1922 100 0 green  
AC138128.1 LLNLF-53H4 fin JGI AC138534.2 LLNLF-89H12 fin JGI 10298 100 0 green  
AC138534.2 LLNLF-89H12 fin JGI AC006117.1 ? fin JGI 630 100 0 green  
AC006117.1 ? fin JGI AC006261.1 LLNLR-291E1 fin JGI 17433 100 0 green  
AC006261.1 LLNLR-291E1 fin JGI AC011480.3 CTB-124I16 fin JGI 6736 99.896 5 green simple sequence in gap
AC011480.3 CTB-124I16 fin JGI AC098776.2 LLNLF-180G10 fin JGI 1093 100 0 green  
AC098776.2 LLNLF-180G10 fin JGI AC006132.1 LLNLR-242F8 fin JGI 1404 100 0 green  
AC006132.1 LLNLR-242F8 fin JGI AC007191.1 ? fin JGI 2155 100 0 green  
AC007191.1 ? fin JGI AC007774.1 LLNLR-229F7 fin JGI 5715 100 0 green  
AC007774.1 LLNLR-229F7 fin JGI AC074212.5 LLNLF-145F10 fin JGI 23687 100 0 green  
AC074212.5 LLNLF-145F10 fin JGI AC011530.6 LLNLR-227G9 fin JGI 15970 100 0 green  
AC011530.6 LLNLR-227G9 fin JGI AC092301.2 LLNLF-198C12 fin JGI 15372 100 1 green simple sequence in gap
AC092301.2 LLNLF-198C12 fin JGI AC008623.4 CTB-14D10 fin JGI 4372 99.794 1 green simple sequence in gap
AC008623.4 CTB-14D10 fin JGI AC006540.2 LLNLF-197C2 fin JGI 18432 99.995 5 green simple sequence in gap
AC006540.2 LLNLF-197C2 fin JGI AC011545.4 LLNLR-266D1 fin JGI 3804 100 0 green  
AC011545.4 LLNLR-266D1 fin JGI AC007785.1 CTC-344H19 fin JGI 4423 99.910 3 green simple sequence in gap
AC007785.1 CTC-344H19 fin JGI AC006262.2 ? fin JGI 20296 100 0 green  
AC006262.2 ? fin JGI AC007193.1 ? fin JGI 1257 100 0 green  
AC007193.1 ? fin JGI AC024584.5 LLNLF-187D8 fin JGI 3921 99.847 8 green simple sequence in gap
AC024584.5 LLNLF-187D8 fin JGI AC011484.7 CTB-158D10 fin JGI 18573 99.720 17 green simple sequence in gap
AC011484.7 CTB-158D10 fin JGI AC011551.3 LLNLR-276E7 fin JGI 1490 99.933 1 green  
AC011551.3 LLNLR-276E7 fin JGI AC093503.2 CTB-12A17 fin JGI 7629 99.856 2 green simple sequence in gap
AC093503.2 CTB-12A17 fin JGI AC008635.6 CTB-174O21 fin JGI 45149 100 0 green  
AC008635.6 CTB-174O21 fin JGI AC008622.6 CTB-147N14 fin JGI 22578 100 0 green  
AC008622.6 CTB-147N14 fin JGI AC098794.2 CTC-400A16 fin JGI 1149 99.913 1 green simple sequence in gap
AC098794.2 CTC-400A16 fin JGI AC008895.7 CTD-2233K9 fin JGI 1171 100 0 green  
AC008895.7 CTD-2233K9 fin JGI AC008755.8 CTD-3026N16 fin JGI 22658 99.991 5 green simple sequence in gap
AC008755.8 CTD-3026N16 fin JGI AC008532.7 CTC-483I11 fin JGI 30843 99.977 11 green simple sequence in gap
AC008532.7 CTC-483I11 fin JGI AC099491.2 LLNLR-294C8 fin JGI 2356 99.745 4 green simple sequence in gap
AC099491.2 LLNLR-294C8 fin JGI AC008754.8 CTD-3023J11 fin JGI 3395 99.646 4 green simple sequence in gap
AC008754.8 CTD-3023J11 fin JGI AC073548.5 RP11-43N16 fin JGI 48178 99.772 31 green simple sequence in gap
AC073548.5 RP11-43N16 fin JGI AC016589.11 CTD-3191M6 fin JGI 16600 99.946 2 green simple sequence in gap
AC016589.11 CTD-3191M6 fin JGI AC010331.8 CTD-3001H11 fin JGI 5480 100 0 green  
AC010331.8 CTD-3001H11 fin JGI AC104531.3 LLNLR-266A7 fin JGI 6797 99.838 2 green simple sequence in gap
AC104531.3 LLNLR-266A7 fin JGI AC008985.7 LLNLF-198H7 fin JGI 9684 100 0 green  
AC008985.7 LLNLF-198H7 fin JGI AC010519.8 LLNLR-261D9 fin JGI 5779 100 0 green  
AC010519.8 LLNLR-261D9 fin JGI AC008745.7 CTD-2571L23 fin JGI 3823 100 2 green simple sequence in gap
AC008745.7 CTD-2571L23 fin JGI AC024582.7 CTD-3098H1 fin JGI 60365 99.853 31 green simple sequence in gap
AC024582.7 CTD-3098H1 fin JGI AC124853.2 RP11-1201N3 fin JGI 19210 99.740 16 green simple sequence in gap
AC124853.2 RP11-1201N3 fin JGI AC010330.7 CTD-2657C13 fin JGI 7149 99.916 7 green simple sequence in gap
AC010330.7 CTD-2657C13 fin JGI AC010458.6 CTD-2265M8 fin JGI 14616 99.918 7 green simple sequence in gap
AC010458.6 CTD-2265M8 fin JGI AC011466.6 CTC-453G23 fin JGI 48374 99.799 24 yellow >0 gap of 25bp or more, not simple sequence
AC011466.6 CTC-453G23 fin JGI AC008392.6 CTC-241F20 fin JGI 6119 100 0 green  
AC008392.6 CTC-241F20 fin JGI AC020955.6 LLNLR-300F9 fin JGI 21532 99.940 3 green simple sequence in gap
AC020955.6 LLNLR-300F9 fin JGI AC011514.3 LLNLF-119C1 fin JGI 2607 100 0 green  
AC011514.3 LLNLF-119C1 fin JGI AC011527.4 LLNLR-227C10 fin JGI 3860 100 0 green  
AC011527.4 LLNLR-227C10 fin JGI AC008403.8 CTC-273B12 fin JGI 7322 99.863 3 green simple sequence in gap
AC008403.8 CTC-273B12 fin JGI AC022154.4 LLNLR-253H3 fin JGI 8005 99.925 4 green simple sequence in gap
AC022154.4 LLNLR-253H3 fin JGI AC008888.7 CTD-2221F12 fin JGI 16095 99.944 6 green simple sequence in gap
AC008888.7 CTD-2221F12 fin JGI AC009002.5 LLNLR-279G3 fin JGI 9710 99.856 3 green simple sequence in gap
AC009002.5 LLNLR-279G3 fin JGI AC026803.7 CTD-2639E6 fin JGI 5255 99.962 2 green simple sequence in gap
AC026803.7 CTD-2639E6 fin JGI AC098792.2 LLNLR-291C4 fin JGI 1213 100 0 green  
AC098792.2 LLNLR-291C4 fin JGI AC008687.5 CTB-60B18 fin JGI 1367 100 0 green  
AC008687.5 CTB-60B18 fin JGI AC096864.2 LLNLR-236A1 fin JGI 1192 99.916 0 green  
AC096864.2 LLNLR-236A1 fin JGI AC008891.7 CTD-2226J19 fin JGI 1093 99.726 0 green  
AC008891.7 CTD-2226J19 fin JGI AC011450.4 CTC-301O7 fin JGI 20380 99.725 22 green simple sequence in gap
AC011450.4 CTC-301O7 fin JGI AC010524.6 LLNLR-278H5 fin JGI 10861 99.890 3 green simple sequence in gap
AC010524.6 LLNLR-278H5 fin JGI AC010643.5 LLNLR-254A7 fin JGI 1871 100 0 green  
AC010643.5 LLNLR-254A7 fin JGI AC010619.7 CTD-3148I10 fin JGI 390 100 0 green  
AC010619.7 CTD-3148I10 fin JGI AC011495.8 CTB-33G10 fin JGI 18032 99.983 4 green simple sequence in gap
AC011495.8 CTB-33G10 fin JGI AC098783.2 LLNLR-243F10 fin JGI 3565 100 0 green  
AC098783.2 LLNLR-243F10 fin JGI AC006942.1 LLNLR-273F9 fin JGI 1298 100 0 green  
AC006942.1 LLNLR-273F9 fin JGI AC018766.2 LLNLF-23669 fin JGI 2597 100 0 green  
AC018766.2 LLNLF-23669 fin JGI AC118341.2 LLNLF-146D3 fin JGI 1812 100 0 green  
AC118341.2 LLNLF-146D3 fin JGI AC118342.2 LLNLF-161B9 fin JGI 10787 100 0 green  
AC118342.2 LLNLF-161B9 fin JGI AC011452.6 CTC-326K19 fin JGI 11279 99.938 1 green simple sequence in gap
AC011452.6 CTC-326K19 fin JGI AC010624.8 CTD-2126E3 fin JGI 48371 99.981 9 green simple sequence in gap
AC010624.8 CTD-2126E3 fin JGI AC020906.6 CTB-83J15 fin JGI 10746 99.972 5 green simple sequence in gap
AC020906.6 CTB-83J15 fin JGI AC010515.8 LLNLR-249H9 fin JGI 11108 99.892 2 green simple sequence in gap
AC010515.8 LLNLR-249H9 fin JGI AC008655.7 CTB-191K22 fin JGI 8779 99.749 4 green simple sequence in gap
AC008655.7 CTB-191K22 fin JGI AC020909.9 CTD-2545M3 fin JGI 2161 100 0 green  
AC020909.9 CTD-2545M3 fin JGI AC008743.9 CTD-2560K21 fin JGI 2166 100 0 green  
AC008743.9 CTD-2560K21 fin JGI AC010325.7 CTD-2568A17 fin JGI 25114 99.972 9 green simple sequence in gap
AC010325.7 CTD-2568A17 fin JGI AC011523.3 LLNLF-214C7 fin JGI 2197 99.818 1 green  
AC011523.3 LLNLF-214C7 fin JGI AC037199.2 ? fin JGI 3307 100 0 green  
AC037199.2 ? fin JGI AC011483.7 CTB-147C22 fin JGI 8599 99.895 4 yellow half-dovetail of >0bp and <=50bp; >0 gap of 25bp or more, not simple sequence
AC011483.7 CTB-147C22 fin JGI AC011473.4 CTC-518B2 fin JGI 2226 100 0 green  
AC011473.4 CTC-518B2 fin JGI AC063977.6 CTD-3187F8 fin JGI 11396 99.886 2 yellow half-dovetail of >0bp and <=50bp
AC063977.6 CTD-3187F8 fin JGI AC008750.9 CTD-2616J11 fin JGI 6540 100 1 green  
AC008750.9 CTD-2616J11 fin JGI AC020914.9 CTD-3073N11 fin JGI 38278 99.825 22 green simple sequence in gap
AC020914.9 CTD-3073N11 fin JGI AC018755.3 LLNLR-470E3 fin JGI 125 99.200 0 yellow identity < 99.6%
AC018755.3 LLNLR-470E3 fin JGI AC005946.1 LLNLR-248F10 fin JGI 11251 100 0 green  
AC005946.1 LLNLR-248F10 fin JGI AC006272.1 LLNLF-191C12 fin JGI 9494 100 0 green  
AC006272.1 LLNLF-191C12 fin JGI AC074141.3 LLNLR-288H4 fin JGI 8057 100 1 green simple sequence in gap
AC074141.3 LLNLR-288H4 fin JGI AC011460.3 CTC-429C10 fin JGI 20760 100 0 green  
AC011460.3 CTC-429C10 fin JGI AC011468.8 CTC-471J1 fin JGI 13977 99.986 2 green simple sequence in gap
AC011468.8 CTC-471J1 fin JGI AC010320.10 CTD-2525I3 fin JGI 5182 99.865 3 green simple sequence in gap
AC010320.10 CTD-2525I3 fin JGI AC010332.7 CTD-3018O17 fin JGI 23311 99.790 7 green simple sequence in gap
AC010332.7 CTD-3018O17 fin JGI AC010506.7 LLNLF-128A4 fin JGI 4080 99.510 1 yellow identity < 99.6%
AC010506.7 LLNLF-128A4 fin JGI AC022150.6 CTD-3099C6 fin JGI 16901 99.965 4 green simple sequence in gap
AC022150.6 CTD-3099C6 fin JGI AC008813.6 CTD-2102P23 fin JGI 19534 99.877 1 green simple sequence in gap
AC008813.6 CTD-2102P23 fin JGI AC010487.7 CTD-2331H12 fin JGI 13016 100 0 green  
AC010487.7 CTD-2331H12 fin JGI AC010328.4 CTD-2620I22 fin JGI 1787 100 0 green  
AC010328.4 CTD-2620I22 fin JGI AC092070.2 CTD-2245F17 fin JGI 4536 100 1 green  
AC092070.2 CTD-2245F17 fin JGI AC010467.9 CTD-2287F5 fin JGI 68586 99.825 13 green simple sequence in gap
AC010467.9 CTD-2287F5 fin JGI AC125388.2 CTD-3141N22 fin JGI 1889 100 0 green  
AC125388.2 CTD-3141N22 fin JGI AC022137.6 CTD-2224J9 fin JGI 3691 100 0 green  
AC022137.6 CTD-2224J9 fin JGI AC011487.5 CTB-167G5 fin JGI 15326 99.804 6 green simple sequence in gap
AC011487.5 CTB-167G5 fin JGI AC011453.4 CTC-339O9 fin JGI 7279 99.821 10 green simple sequence in gap
AC011453.4 CTC-339O9 fin JGI AC008753.9 CTD-3022G6 fin JGI 34379 99.875 11 green simple sequence in gap
AC008753.9 CTD-3022G6 fin JGI AC008440.9 CTC-331H23 fin JGI 22962 99.935 4 green simple sequence in gap
AC008440.9 CTC-331H23 fin JGI AC012314.8 CTD-3093M3 fin JGI 2386 100 0 green  
AC012314.8 CTD-3093M3 fin JGI AC010492.9 CTD-2337J16 fin JGI 32658 99.942 8 green simple sequence in gap
AC010492.9 CTD-2337J16 fin JGI AC098789.2 LLNLR-268G8 fin JGI 1117 99.910 0 green  
AC098789.2 LLNLR-268G8 fin JGI AC010518.7 LLNLR-260H6 fin JGI 1278 100 0 green  
AC010518.7 LLNLR-260H6 fin JGI AC008984.5 LLNLF-191E4 fin JGI 2075 100 0 green  
AC008984.5 LLNLF-191E4 fin JGI AC008746.10 CTD-2587H19 fin JGI 8590 99.860 2 green simple sequence in gap
AC008746.10 CTD-2587H19 fin JGI AC104536.2 LLNLR-308D7 fin JGI 23567 99.958 1 green  
AC104536.2 LLNLR-308D7 fin JGI AC009892.5 CTB-83J4 fin JGI 11611 99.905 5 green simple sequence in gap
AC009892.5 CTB-83J4 fin JGI AC011515.4 LLNLF-139A9 fin JGI 6342 99.779 3 green simple sequence in gap
AC011515.4 LLNLF-139A9 fin JGI AC098784.2 LLNLR-250B1 fin JGI 1496 100 0 green  
AC098784.2 LLNLR-250B1 fin JGI AC006293.1 LLNLF-112A2 fin JGI 1224 100 0 green  
AC006293.1 LLNLF-112A2 fin JGI AC011501.8 CTB-61M7 fin JGI 1173 100 0 green  
AC011501.8 CTB-61M7 fin JGI AC011476.8 CTC-550B14 fin JGI 12883 99.992 0 green  
AC011476.8 CTC-550B14 fin JGI AC005782.1 LLNLR-280F11 fin  2381 99.958 0 green  
AC005782.1 LLNLR-280F11 fin  AC010327.8 CTD-2587H24 fin JGI 10580 99.943 0 green  
AC010327.8 CTD-2587H24 fin JGI AC116342.2 RP11-174J9 fin JGI 27714 99.895 3 green simple sequence in gap
AC116342.2 RP11-174J9 fin JGI AC116338.3 CTD-2594I19 fin JGI 6399 100 0 green  
AC116338.3 CTD-2594I19 fin JGI AC008974.7 LLNLF-116A8 fin JGI 3061 99.967 2 green simple sequence in gap
AC008974.7 LLNLF-116A8 fin JGI AC020922.9 CTD-2105E13 fin JGI 17555 99.949 6 green simple sequence in gap
AC020922.9 CTD-2105E13 fin JGI AC135592.2 RP13-598I11 fin JGI 18640 99.909 16 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC135592.2 RP13-598I11 fin JGI AC008735.9 CTD-2537I9 fin JGI 24275 99.909 9 black initial certificate; >0 gap of 50bp or more, not simple sequence
AC008735.9 CTD-2537I9 fin JGI AC010525.6 LLNLR-297C12 fin JGI 5625 99.876 2 yellow half-dovetail of >0bp and <=50bp
AC010525.6 LLNLR-297C12 fin JGI AC008749.6 CTD-2611O12 fin JGI 13622 99.993 0 green  
AC008749.6 CTD-2611O12 fin JGI AC012310.5 CTC-518O7 fin JGI 28721 99.735 15 green simple sequence in gap
AC012310.5 CTC-518O7 fin JGI AC011470.5 CTC-490M10 fin JGI 11554 99.879 3 green simple sequence in gap
AC011470.5 CTC-490M10 fin JGI AC024580.6 CTD-2621I17 fin JGI 64200 99.835 36 green simple sequence in gap
AC024580.6 CTD-2621I17 fin JGI AC011506.3 CTD-2086L14 fin JGI 15863 100 0 green  
AC011506.3 CTD-2086L14 fin JGI AC006116.1 ? fin JGI 6845 100 0 green  
AC006116.1 ? fin JGI AC013256.1 ? fin JGI 2656 99.887 1 green simple sequence in gap
AC013256.1 ? fin JGI AC098795.2 LLNLF-90D8 fin JGI 1195 100 0 yellow half-dovetail of >0bp and <=50bp
AC098795.2 LLNLF-90D8 fin JGI AC004696.1 LLNLR-285B5 fin JGI 1780 100 0 green  
AC004696.1 LLNLR-285B5 fin JGI AC005498.1 LLNLR-278G1 fin JGI 6307 100 0 green  
AC005498.1 LLNLR-278G1 fin JGI AC007228.1 ? fin JGI 10160 99.961 1 green simple sequence in gap
AC007228.1 ? fin JGI AC093061.2 LLNLF-213A7 fin JGI 1591 99.937 1 green simple sequence in gap
AC093061.2 LLNLF-213A7 fin JGI AC006115.1 ? fin JGI 1793 99.944 1 green simple sequence in gap
AC006115.1 ? fin JGI AC004792.1 LLNLR-278A3 fin JGI 11438 99.904 3 yellow >0 gap of 25bp or more, not simple sequence
AC004792.1 LLNLR-278A3 fin JGI AC044792.6 CTC-258N23 fin JGI 3897 99.949 1 green  
AC044792.6 CTC-258N23 fin JGI AC025588.1 CTC-360J11 fin JGI 20868 100 0 green  
AC025588.1 CTC-360J11 fin JGI AC005261.2 CTC-444N24 fin JGI 30384 100 0 green  
AC005261.2 CTC-444N24 fin JGI AC003002.1 ? fin JGI 12664 99.882 2 green simple sequence in gap
AC003002.1 ? fin JGI AC004076.1 LLNLR-256C11 fin JGI 1673 100 0 green  
AC004076.1 LLNLR-256C11 fin JGI AC003005.1 LLNLR-243B9 fin JGI 338 100 0 green  
AC003005.1 LLNLR-243B9 fin JGI AC003682.1 LLNLR-290E12 fin JGI 5157 100 0 green  
AC003682.1 LLNLR-290E12 fin JGI AC004017.1 LLNLF-159B11 fin JGI 3827 100 1 green simple sequence in gap
AC004017.1 LLNLF-159B11 fin JGI AC003006.1 LLNLR-287H3 fin n£ 1486 100 0 green  
AC003006.1 LLNLR-287H3 fin n£ AC093037.1 LLNLR-310B2 fin JGI 1197 100 0 green  
AC093037.1 LLNLR-310B2 fin JGI AC010645.5 LLNLR-268A12 fin JGI 1458 100 0 green  
AC010645.5 LLNLR-268A12 fin JGI AC010522.3 LLNLR-270H7 fin JGI 10989 100 0 green  
AC010522.3 LLNLR-270H7 fin JGI AC010326.7 CTD-2583A14 fin JGI 5119 100 0 green  
AC010326.7 CTD-2583A14 fin JGI AC008969.6 CTD-2368P22 fin JGI 37110 99.916 13 green simple sequence in gap
AC008969.6 CTD-2368P22 fin JGI AC008751.7 CTD-2623H2 fin JGI 20653 100 2 green  
AC008751.7 CTD-2623H2 fin JGI AC020915.6 CTD-3138B18 fin JGI 36480 99.964 7 green simple sequence in gap
AC020915.6 CTD-3138B18 fin JGI AC010642.5 LLNLR-245B6 fin JGI 9458 99.989 0 green  
AC010642.5 LLNLR-245B6 fin JGI AC012313.7 CTD-2619J13 fin JGI 7636 99.882 5 green simple sequence in gap
AC012313.7 CTD-2619J13 fin JGI AC016630.6 LLNLR-305D11 fin JGI 2551 99.843 1 green simple sequence in gap
AC016630.6 LLNLR-305D11 fin JGI AC016629.7 LLNLR-271E8 fin JGI 5607 100 0 green  
AC016629.7 LLNLR-271E8 fin JGI AP006325.2 ? fin RIKEN 25658 99.969 3 green simple sequence in gap