NCBI

Find a TPF

Join Legend: Click on the colored ball in the 'join' column to see alignment details.

Join view for chr 14 (reference)
acc1 clone1 clone1 status clone1 center acc2 clone2 clone2 status clone2 center align len perc. id gaps join status comments
CR383659.1 RP11-587D12 fin GS CR383658.1 RP11-754I20 fin GS 77340 99.935 11 green simple sequence in gap
CR383658.1 RP11-754I20 fin GS CR383657.1 RP11-491G9 fin GS 58682 100 0 green  
CR383657.1 RP11-491G9 fin GS CR383656.1 RP11-536C10 fin GS 86031 99.998 1 green simple sequence in gap
CR383656.1 RP11-536C10 fin GS AL512624.5 CTD-2311B13 fin GS 13115 98.925 10 yellow identity < 99.6%
AL512624.5 CTD-2311B13 fin GS AL929602.3 CTD-2314B22 fin GS 17813 99.798 1 green simple sequence in gap
AL929602.3 CTD-2314B22 fin GS AL589743.4 RP11-496I2 fin GS 86796 99.651 54 red >2 gap of 25bp or more, not simple sequence
AL589743.4 RP11-496I2 fin GS AL589182.4 RP11-146E13 fin GS 12584 99.770 3 green simple sequence in gap
AL589182.4 RP11-146E13 fin GS AL929601.4 RP11-244H18 fin GS 50973 99.547 25 red half-dovetail of >50bp
AL929601.4 RP11-244H18 fin GS AL512310.4 RP11-597A11 fin GS 45029 99.476 36 red >0 gap of 50bp or more, not simple sequence
AL512310.4 RP11-597A11 fin GS AL391156.3 CTD-2335L22 fin GS 3165 99.842 0 green  
AL391156.3 CTD-2335L22 fin GS AL359218.4 RP11-55G7 fin GS 4512 99.867 1 green simple sequence in gap
AL359218.4 RP11-55G7 fin GS AL163152.4 RP11-98N22 fin GS 55190 99.725 25 green simple sequence in gap
AL163152.4 RP11-98N22 fin GS AL356019.5 CTD-2292M16 fin GS 52714 99.898 10 green simple sequence in gap
AL356019.5 CTD-2292M16 fin GS AL355075.6 RP11-203M5 fin GS 2280 99.825 0 green  
AL355075.6 RP11-203M5 fin GS AL163195.5 RP11-14J7 fin GS 47235 99.987 6 red >0 gap of 50bp or more, not simple sequence
AL163195.5 RP11-14J7 fin GS AL163636.7 RP11-903H12 fin GS 66974 99.769 32 green simple sequence in gap
AL163636.7 RP11-903H12 fin GS AL133371.3 RP11-219E7 fin GS 22300 99.995 1 green simple sequence in gap
AL133371.3 RP11-219E7 fin GS AL355922.4 RP11-84C10 fin GS 64932 99.995 3 green simple sequence in gap
AL355922.4 RP11-84C10 fin GS AL161668.6 RP11-998D10 fin GS 56752 99.868 19 green simple sequence in gap
AL161668.6 RP11-998D10 fin GS AL157687.6 CTD-2552B11 fin GS 140132 99.922 36 green simple sequence in gap
AL157687.6 CTD-2552B11 fin GS AL135744.4 RP11-524O1 fin GS 8143 99.951 0 green  
AL135744.4 RP11-524O1 fin GS AL161747.5 RP11-689J19 fin GS 11063 99.991 0 green  
AL161747.5 RP11-689J19 fin GS AE000658.1 XX-MISC_1 unk UWGC 60094 99.928 25 green simple sequence in gap
AE000658.1 XX-MISC_1 unk UWGC AE000659.1 XX-MISC_2 unk UWGC 58 100 0 yellow alignment length < 2000
AE000659.1 XX-MISC_2 unk UWGC AE000660.1 XX-MISC_3 unk UWGC 58 100 0 yellow alignment length < 2000
AE000660.1 XX-MISC_3 unk UWGC AE000661.1 ? unk UWGC 58 100 0 yellow alignment length < 2000
AE000661.1 ? unk UWGC AE000662.1 ? unk UWGC 58 100 0 yellow alignment length < 2000
AE000662.1 ? unk UWGC AL160314.7 CTD-2555K7 fin GS 33963 99.797 45 green simple sequence in gap
AL160314.7 CTD-2555K7 fin GS AL135998.6 RP11-137H15 fin GS 406 99.754 0 green  
AL135998.6 RP11-137H15 fin GS AL132780.5 RP11-298I3 fin GS 8978 99.933 3 green simple sequence in gap
AL132780.5 RP11-298I3 fin GS AL117258.4 RP11-244E17 fin GS 896 100 1 green simple sequence in gap
AL117258.4 RP11-244E17 fin GS AL049829.4 RP11-124D2 fin GS 27121 99.882 22 green simple sequence in gap
AL049829.4 RP11-124D2 fin GS AL132855.4 CTD-2201G16 fin GS 48220 99.942 7 green simple sequence in gap
AL132855.4 CTD-2201G16 fin GS AL135999.4 RP11-66N24 fin GS 21164 99.726 13 green simple sequence in gap
AL135999.4 RP11-66N24 fin GS AL160237.4 RP11-388E23 fin GS 41373 99.932 1 green simple sequence in gap
AL160237.4 RP11-388E23 fin GS AL136419.3 RP11-76P17 fin GS 331 100 0 green  
AL136419.3 RP11-76P17 fin GS AL136295.3 RP11-468E2 fin GS 18106 99.613 3 yellow half-dovetail of >0bp and <=50bp
AL136295.3 RP11-468E2 fin GS AL096870.5 RP11-934B9 fin GS 16465 99.751 18 red >0 gap of 50bp or more, not simple sequence
AL096870.5 RP11-934B9 fin GS AL132800.4 RP11-80A15 fin GS 7465 99.987 1 green  
AL132800.4 RP11-80A15 fin GS AL136018.4 RP11-104E19 fin GS 11094 100 0 green  
AL136018.4 RP11-104E19 fin GS AL161663.4 RP11-725L2 fin GS 4691 100 0 green  
AL161663.4 RP11-725L2 fin GS AL137164.3 RP11-893D14 fin GS 57907 99.667 18 green simple sequence in gap
AL137164.3 RP11-893D14 fin GS AL161666.4 RP11-89K22 fin GS 4341 100 0 green  
AL161666.4 RP11-89K22 fin GS AL163052.4 RP11-769B21 fin GS 56643 99.832 13 green simple sequence in gap
AL163052.4 RP11-769B21 fin GS AL132827.2 CTD-2149C7 fin GS 2442 99.877 1 green simple sequence in gap
AL132827.2 CTD-2149C7 fin GS AL079352.3 RP11-388G3 fin GS 20669 99.511 14 yellow identity < 99.6%
AL079352.3 RP11-388G3 fin GS AL132715.3 RP11-368E9 fin GS 24051 100 2 green  
AL132715.3 RP11-368E9 fin GS AL359396.5 RP11-314P15 fin GS 9754 100 0 green  
AL359396.5 RP11-314P15 fin GS AL132633.2 CTD-2216L14 fin GS 7349 99.891 0 green  
AL132633.2 CTD-2216L14 fin GS AL049831.2 RP11-330O19 fin GS 36499 99.825 26 green simple sequence in gap
AL049831.2 RP11-330O19 fin GS AL121841.5 RP11-850C20 fin GS 13532 100 0 green  
AL121841.5 RP11-850C20 fin GS AL133316.5 CTD-2577N12 fin GS 1904 99.948 0 green  
AL133316.5 CTD-2577N12 fin GS AL132716.6 RP11-1124A8 fin GS 142285 99.780 57 red >0 gap of 50bp or more, not simple sequence
AL132716.6 RP11-1124A8 fin GS AL079343.4 RP11-483C6 fin GS 4678 100 0 green  
AL079343.4 RP11-483C6 fin GS AL132718.5 RP11-626P14 fin GS 21165 99.962 1 green  
AL132718.5 RP11-626P14 fin GS AL110292.4 RP11-384J4 fin GS 55013 99.987 9 green  
AL110292.4 RP11-384J4 fin GS AL136522.6 RP11-144C18 fin GS 12904 99.822 5 green simple sequence in gap
AL136522.6 RP11-144C18 fin GS AL356015.3 CTD-3006G17 fin GS 18582 99.882 3 green simple sequence in gap
AL356015.3 CTD-3006G17 fin GS AL390334.4 RP11-664B22 fin GS 27885 99.921 8 green simple sequence in gap
AL390334.4 RP11-664B22 fin GS AL391748.3 RP11-630G18 fin GS 35878 99.983 4 green simple sequence in gap
AL391748.3 RP11-630G18 fin GS AL390894.2 RP11-572M18 fin GS 15218 99.875 6 green simple sequence in gap
AL390894.2 RP11-572M18 fin GS AL391158.5 RP11-560O13 fin GS 1680 99.821 0 green  
AL391158.5 RP11-560O13 fin GS AL445384.3 RP11-460A13 fin GS 38226 100 0 green  
AL445384.3 RP11-460A13 fin GS AL163194.5 RP11-120I18 fin GS 101413 99.922 19 green simple sequence in gap
AL163194.5 RP11-120I18 fin GS AL163639.3 CTD-2291J13 fin GS 49134 99.884 16 green simple sequence in gap
AL163639.3 CTD-2291J13 fin GS AL139023.6 RP11-207M8 fin GS 23497 99.885 8 green simple sequence in gap
AL139023.6 RP11-207M8 fin GS AL133162.4 CTD-2591A6 fin GS 4378 99.977 1 green simple sequence in gap
AL133162.4 CTD-2591A6 fin GS AL121766.5 RP11-412H8 fin GS 31733 99.814 18 yellow >0 gap of 25bp or more, not simple sequence
AL121766.5 RP11-412H8 fin GS AL049777.5 RP11-966I7 fin GS 20240 99.936 2 green simple sequence in gap
AL049777.5 RP11-966I7 fin GS AL122126.4 RP11-30H9 fin GS 3161 100 0 green  
AL122126.4 RP11-30H9 fin GS AL138974.4 CTD-2384A14 fin GS 26722 99.985 1 green  
AL138974.4 CTD-2384A14 fin GS AL135878.4 RP11-148E17 fin GS 57099 99.907 11 green simple sequence in gap
AL135878.4 RP11-148E17 fin GS AL117693.5 RP11-562L8 fin GS 33302 99.889 14 green simple sequence in gap
AL117693.5 RP11-562L8 fin GS AL133166.3 CTD-2010O1 fin GS 7050 99.702 7 green simple sequence in gap
AL133166.3 CTD-2010O1 fin GS AL158058.5 RP11-260G13 fin GS 21866 99.931 2 green simple sequence in gap
AL158058.5 RP11-260G13 fin GS AL135858.3 RP11-667E4 fin GS 55921 99.911 17 yellow >0 gap of 25bp or more, not simple sequence
AL135858.3 RP11-667E4 fin GS AL356756.4 CTD-2503I6 fin GS 27871 99.950 6 green simple sequence in gap
AL356756.4 CTD-2503I6 fin GS AL445884.4 RP11-419C10 fin GS 99505 99.992 7 green simple sequence in gap
AL445884.4 RP11-419C10 fin GS AL355053.4 CTD-2305P23 fin GS 35197 99.983 1 green  
AL355053.4 CTD-2305P23 fin GS AL133372.4 RP11-269C4 fin GS 355 100 0 green  
AL133372.4 RP11-269C4 fin GS AL121840.4 CTD-2251F13 fin GS 10331 99.913 2 green simple sequence in gap
AL121840.4 CTD-2251F13 fin GS AL079305.3 RP11-306B9 fin GS 3811 99.974 1 green simple sequence in gap
AL079305.3 RP11-306B9 fin GS AL132985.4 RP11-1103G16 fin GS 120596 99.959 12 green simple sequence in gap
AL132985.4 RP11-1103G16 fin GS AL117355.5 RP11-354E14 fin GS 6196 99.887 2 green simple sequence in gap
AL117355.5 RP11-354E14 fin GS AL121852.3 RP11-159L20 fin GS 39380 99.934 0 green  
AL121852.3 RP11-159L20 fin GS AL513133.6 RP11-114O13 fin GS 3123 99.744 1 green simple sequence in gap
AL513133.6 RP11-114O13 fin GS AL049830.3 RP11-829H16 fin GS 686 100 0 yellow half-dovetail of >0bp and <=50bp
AL049830.3 RP11-829H16 fin GS AL121808.4 CTD-2313O13 fin GS 26766 99.836 13 green simple sequence in gap
AL121808.4 CTD-2313O13 fin GS AL136418.4 RP11-596D21 fin GS 11282 99.956 2 green simple sequence in gap
AL136418.4 RP11-596D21 fin GS AL139353.3 RP11-176H8 fin GS 32857 100 1 green  
AL139353.3 RP11-176H8 fin GS AL163973.1 CTD-2213F21 fin GS 3327 99.940 0 green  
AL163973.1 CTD-2213F21 fin GS AL390798.3 RP11-21O19 fin GS 3809 99.948 1 green simple sequence in gap
AL390798.3 RP11-21O19 fin GS AL359400.4 RP11-114L12 fin GS 56341 99.998 0 green  
AL359400.4 RP11-114L12 fin GS AL355112.4 RP11-159D23 fin GS 16690 99.934 3 green  
AL355112.4 RP11-159D23 fin GS AL352984.4 RP11-187E13 fin GS 63045 99.795 24 yellow >0 gap of 25bp or more, not simple sequence
AL352984.4 RP11-187E13 fin GS AL161665.5 RP11-431H16 fin GS 13366 99.888 3 green simple sequence in gap
AL161665.5 RP11-431H16 fin GS AL136298.5 RP11-134E15 fin GS 3252 99.908 3 green simple sequence in gap
AL136298.5 RP11-134E15 fin GS AL132988.4 RP11-320M16 fin GS 11488 99.991 1 green simple sequence in gap
AL132988.4 RP11-320M16 fin GS AL117672.5 RP11-142C1 fin GS 11348 99.877 1 green  
AL117672.5 RP11-142C1 fin GS AL049781.5 RP11-340L3 fin GS 15472 99.903 2 green simple sequence in gap
AL049781.5 RP11-340L3 fin GS AL109769.5 RP11-501E21 fin GS 48565 99.965 7 green simple sequence in gap
AL109769.5 RP11-501E21 fin GS AL355886.4 RP11-372C16 fin GS 37225 99.868 16 red >0 gap of 50bp or more, not simple sequence
AL355886.4 RP11-372C16 fin GS AL139296.4 CTD-2504D12 fin GS 31558 99.829 5 green simple sequence in gap
AL139296.4 CTD-2504D12 fin GS AL158802.1 CTD-2008K18 fin GS 98602 100 0 green  
AL158802.1 CTD-2008K18 fin GS AL133305.3 RP11-66M11 fin GS 9968 99.910 3 green simple sequence in gap
AL133305.3 RP11-66M11 fin GS AL161851.4 RP11-1078I14 fin GS 1997 100 0 green  
AL161851.4 RP11-1078I14 fin GS AL157689.3 RP11-1075M22 fin GS 29170 99.997 3 green simple sequence in gap
AL157689.3 RP11-1075M22 fin GS AL358340.6 RP11-1007I4 fin GS 43938 99.827 33 green simple sequence in gap
AL358340.6 RP11-1007I4 fin GS AL358274.3 CTD-2350E12 fin GS 35522 99.966 10 red half-dovetail of >50bp
AL358274.3 CTD-2350E12 fin GS AL162191.6 RP11-349D8 fin GS 6108 99.853 1 green  
AL162191.6 RP11-349D8 fin GS AL356806.4 CTD-2174H20 fin GS 6805 99.824 0 green  
AL356806.4 CTD-2174H20 fin GS AL445363.7 RP11-671J11 fin GS 55004 99.935 10 green simple sequence in gap
AL445363.7 RP11-671J11 fin GS AL445883.3 RP11-908D14 fin GS 8978 99.866 9 green simple sequence in gap
AL445883.3 RP11-908D14 fin GS AL355885.4 RP11-434O22 fin GS 82179 100 1 green simple sequence in gap
AL355885.4 RP11-434O22 fin GS AL121603.4 RP11-73E17 fin GS 58362 99.914 28 green simple sequence in gap
AL121603.4 RP11-73E17 fin GS AL049776.3 RP11-85K15 fin GS 22878 99.974 0 green  
AL049776.3 RP11-85K15 fin GS AL121594.6 RP11-173D9 fin GS 12509 99.992 0 green  
AL121594.6 RP11-173D9 fin GS AL133163.3 RP11-561B11 fin GS 884 99.887 0 green  
AL133163.3 RP11-561B11 fin GS AL160231.4 RP11-355C3 fin GS 40563 99.990 11 green simple sequence in gap
AL160231.4 RP11-355C3 fin GS AL137818.4 RP11-102C24 fin GS 18547 99.995 0 green  
AL137818.4 RP11-102C24 fin GS AL162311.5 RP11-317N8 fin GS 27479 99.975 1 green simple sequence in gap
AL162311.5 RP11-317N8 fin GS AL133304.4 RP11-116N8 fin GS 509 100 0 green  
AL133304.4 RP11-116N8 fin GS AL162511.5 RP11-259K15 fin GS 4840 99.711 2 green simple sequence in gap
AL162511.5 RP11-259K15 fin GS AL356803.2 CTD-2130G23 fin GS 62282 98.937 77 red >0 gap of 500bp or more, not simple sequence
AL356803.2 CTD-2130G23 fin GS AL137226.3 RP11-356A6 fin GS 21180 99.868 9 red >0 gap of 500bp or more, not simple sequence
AL137226.3 RP11-356A6 fin GS AL132857.4 RP11-896J10 fin GS 30466 99.987 1 green simple sequence in gap
AL132857.4 RP11-896J10 fin GS AL079303.3 RP11-964E11 fin GS 24988 99.768 7 green simple sequence in gap
AL079303.3 RP11-964E11 fin GS AL162464.5 RP11-81F13 fin GS 3486 99.885 1 green simple sequence in gap
AL162464.5 RP11-81F13 fin GS AL121775.3 RP11-552K16 fin GS 18263 99.863 7 green simple sequence in gap
AL121775.3 RP11-552K16 fin GS AL079304.3 RP11-537P22 fin GS 2822 99.894 0 green  
AL079304.3 RP11-537P22 fin GS AL121857.6 RP11-158A24 fin GS 114965 99.968 10 green simple sequence in gap
AL121857.6 RP11-158A24 fin GS AL109759.4 RP11-898B23 fin GS 21580 99.977 6 green  
AL109759.4 RP11-898B23 fin GS AL121790.4 RP11-356O9 fin GS 8522 99.930 1 green simple sequence in gap
AL121790.4 RP11-356O9 fin GS AL136296.3 RP11-588D7 fin GS 55195 99.884 18 green simple sequence in gap
AL136296.3 RP11-588D7 fin GS AL163151.1 RP11-138H18 fin GS 14020 100 0 green  
AL163151.1 RP11-138H18 fin GS AL359233.5 CTD-2058B24 fin GS 14796 99.932 2 green simple sequence in gap
AL359233.5 CTD-2058B24 fin GS AL392023.3 CTD-2142D14 fin GS 37167 99.970 13 green simple sequence in gap
AL392023.3 CTD-2142D14 fin GS AL450109.3 RP11-477I16 fin GS 63752 99.763 26 green simple sequence in gap
AL450109.3 RP11-477I16 fin GS AL161751.3 RP11-96D24 fin GS 75251 99.876 20 green simple sequence in gap
AL161751.3 RP11-96D24 fin GS AL355835.3 RP11-196N22 fin GS 148482 99.783 62 green simple sequence in gap
AL355835.3 RP11-196N22 fin GS AL499608.3 RP11-684G2 fin GS 540 100 0 green  
AL499608.3 RP11-684G2 fin GS AL357094.4 RP11-14N4 fin GS 323 99.381 0 yellow identity < 99.6%
AL357094.4 RP11-14N4 fin GS AL359950.4 RP11-566K8 fin GS 26175 100 0 green  
AL359950.4 RP11-566K8 fin GS AL391694.4 CTD-3238D6 fin GS 217 100 0 green  
AL391694.4 CTD-3238D6 fin GS AL132994.4 RP11-506K19 fin GS 944 100 0 green  
AL132994.4 RP11-506K19 fin GS AL109628.5 RP11-545M17 fin GS 20593 99.990 2 green simple sequence in gap
AL109628.5 RP11-545M17 fin GS AL132639.4 RP11-407N17 fin GS 22097 99.986 1 green simple sequence in gap
AL132639.4 RP11-407N17 fin GS AL157791.4 RP11-647O20 fin GS 113658 99.995 2 red >0 gap of 50bp or more, not simple sequence
AL157791.4 RP11-647O20 fin GS AL049875.2 RP11-111A21 fin GS 3278 99.909 0 green  
AL049875.2 RP11-111A21 fin GS AL117191.6 CTD-2303G14 fin GS 12960 99.884 2 green  
AL117191.6 CTD-2303G14 fin GS AL355052.3 RP11-1070A8 fin GS 44546 99.681 9 green simple sequence in gap
AL355052.3 RP11-1070A8 fin GS AL133233.2 RP11-34O18 fin GS 39048 99.995 0 green  
AL133233.2 RP11-34O18 fin GS AL121767.6 CTD-2593I21 fin GS 24095 99.971 0 green  
AL121767.6 CTD-2593I21 fin GS AL049828.3 RP11-1074O12 fin GS 25238 99.956 5 red >0 gap of 500bp or more, not simple sequence
AL049828.3 RP11-1074O12 fin GS AL352977.4 RP11-662J14 fin GS 1146 100 0 green  
AL352977.4 RP11-662J14 fin GS AL355889.1 CTD-2581L17 dra GS 15897 99.679 15 white alignment exists; one or more unfinished sequences; simple sequence in gap
AL355889.1 CTD-2581L17 dra GS AL390800.4 RP11-254B15 fin GS 15178 99.980 0 white alignment exists; one or more unfinished sequences
AL390800.4 RP11-254B15 fin GS AL451071.3 RP11-779M2 fin GS 71427 99.884 17 yellow half-dovetail of >0bp and <=50bp
AL451071.3 RP11-779M2 fin GS AL390815.5 RP11-129M6 fin GS 56933 99.856 25 green simple sequence in gap
AL390815.5 RP11-129M6 fin GS AL390801.4 RP11-728G21 fin GS 8765 99.703 5 green simple sequence in gap
AL390801.4 RP11-728G21 fin GS AL391516.4 RP11-629F19 fin GS 90919 99.765 37 red >0 gap of 500bp or more, not simple sequence
AL391516.4 RP11-629F19 fin GS AL390335.3 RP11-757K12 fin GS 0 0 0 red more than one overlap present
AL390335.3 RP11-757K12 fin GS AL356596.3 RP11-354G16 fin GS 6552 100 0 green  
AL356596.3 RP11-354G16 fin GS AL121821.7 CTD-2298J14 fin GS 9119 99.879 4 green simple sequence in gap
AL121821.7 CTD-2298J14 fin GS AL109662.3 RP11-1053O12 fin GS 794 100 0 green  
AL109662.3 RP11-1053O12 fin GS AL138498.5 RP11-168D12 fin GS 14437 99.882 5 green simple sequence in gap
AL138498.5 RP11-168D12 fin GS AL355839.4 RP11-243J8 fin GS 1142 99.912 0 green  
AL355839.4 RP11-243J8 fin GS AL391397.4 RP11-625F13 fin GS 26596 99.853 5 green simple sequence in gap
AL391397.4 RP11-625F13 fin GS AL583864.3 RP11-149J3 fin GS 287 100 0 green  
AL583864.3 RP11-149J3 fin GS AL445074.4 RP11-313C4 fin GS 1799 100 1 green simple sequence in gap
AL445074.4 RP11-313C4 fin GS AL450442.2 RP11-214N1 fin GS 8951 100 0 green  
AL450442.2 RP11-214N1 fin GS AL442163.5 RP11-90P16 fin GS 23094 99.991 1 green  
AL442163.5 RP11-90P16 fin GS AL389914.3 CTD-2307P3 fin GS 21739 99.936 5 green simple sequence in gap
AL389914.3 CTD-2307P3 fin GS AL356800.4 RP11-97N10 fin GS 16333 99.926 10 green simple sequence in gap
AL356800.4 RP11-97N10 fin GS AL163153.4 RP11-16O13 fin GS 20120 99.930 6 green simple sequence in gap
AL163153.4 RP11-16O13 fin GS AL390097.2 CTD-2278M12 fin GS 6876 99.767 2 green simple sequence in gap
AL390097.2 CTD-2278M12 fin GS AL445383.5 RP11-88E18 fin GS 26966 99.796 9 green simple sequence in gap
AL445383.5 RP11-88E18 fin GS AL583809.3 RP11-736L22 fin GS 71491 99.937 8 green  
AL583809.3 RP11-736L22 fin GS AL442183.4 RP11-477N13 fin GS 45987 99.996 0 green  
AL442183.4 RP11-477N13 fin GS AL358913.4 RP11-557C9 fin GS 22220 99.757 6 green simple sequence in gap
AL358913.4 RP11-557C9 fin GS AL133239.4 RP11-71I8 fin GS 5074 99.862 2 green simple sequence in gap
AL133239.4 RP11-71I8 fin GS AL160211.2 RP11-134J10 fin GS 46505 100 0 green  
AL160211.2 RP11-134J10 fin GS AL135961.4 RP11-910K8 fin GS 85665 99.996 1 green  
AL135961.4 RP11-910K8 fin GS AL109766.5 RP11-305B6 fin GS 40490 99.980 2 green simple sequence in gap
AL109766.5 RP11-305B6 fin GS AL355888.3 RP11-322L17 fin GS 19228 99.995 0 green  
AL355888.3 RP11-322L17 fin GS AL161752.4 RP11-99L13 fin GS 44647 99.935 1 green  
AL161752.4 RP11-99L13 fin GS AL356022.3 RP11-163M18 fin GS 43494 99.814 21 green simple sequence in gap
AL356022.3 RP11-163M18 fin GS AL358293.4 RP11-398E10 fin GS 10257 99.922 0 green  
AL358293.4 RP11-398E10 fin GS AL160233.3 CTD-2373J19 fin GS 61602 99.971 4 green simple sequence in gap
AL160233.3 CTD-2373J19 fin GS AL049870.3 RP11-857B24 fin GS 15889 100 0 green  
AL049870.3 RP11-857B24 fin GS AL121809.6 CTD-3028N15 fin GS 7104 99.803 2 green simple sequence in gap
AL121809.6 CTD-3028N15 fin GS AL133501.6 RP11-35B20 fin GS 23434 99.889 10 green simple sequence in gap
AL133501.6 RP11-35B20 fin GS AL162632.4 RP11-454K7 fin GS 66892 99.933 22 yellow >0 gap of 25bp or more, not simple sequence
AL162632.4 RP11-454K7 fin GS AL139354.6 RP11-945F5 fin GS 21391 99.841 0 green  
AL139354.6 RP11-945F5 fin GS AL359398.2 RP11-369C8 fin GS 72444 99.946 11 yellow >0 gap of 25bp or more, not simple sequence
AL359398.2 RP11-369C8 fin GS AL158111.5 RP11-106G3 fin GS 73982 99.796 33 yellow >0 gap of 25bp or more, not simple sequence
AL158111.5 RP11-106G3 fin GS AL133449.5 RP11-111J13 fin GS 85500 99.610 47 red >0 gap of 50bp or more, not simple sequence
AL133449.5 RP11-111J13 fin GS AL133224.4 RP11-16G17 fin GS 35039 99.974 1 green  
AL133224.4 RP11-16G17 fin GS AL161664.8 CTD-2594L5 fin GS 51349 99.796 23 red >0 gap of 50bp or more, not simple sequence
AL161664.8 CTD-2594L5 fin GS AL358341.3 RP11-1126O17 fin GS 57313 99.867 19 green simple sequence in gap
AL358341.3 RP11-1126O17 fin GS AL512342.2 RP11-960J4 fin GS 843 100 1 green simple sequence in gap
AL512342.2 RP11-960J4 fin GS AL355099.5 RP11-1A16 fin GS 683 99.854 0 green  
AL355099.5 RP11-1A16 fin GS AL512414.2 RP11-663F5 fin GS 57393 99.984 1 green simple sequence in gap
AL512414.2 RP11-663F5 fin GS AL591768.2 RP11-274A16 fin GS 52161 99.927 6 green simple sequence in gap
AL591768.2 RP11-274A16 fin GS AL591769.3 RP11-600G2 fin GS 41565 99.988 1 green simple sequence in gap
AL591769.3 RP11-600G2 fin GS AL591771.1 RP11-727C22 fin GS 42240 99.986 4 green simple sequence in gap
AL591771.1 RP11-727C22 fin GS AL359951.4 RP11-196A3 fin GS 368 100 0 green  
AL359951.4 RP11-196A3 fin GS AL157792.3 RP11-388M7 fin GS 8412 100 0 green  
AL157792.3 RP11-388M7 fin GS AL358832.3 RP11-767H2 fin GS 5471 99.872 1 green  
AL358832.3 RP11-767H2 fin GS AL079306.3 RP11-216F9 fin GS 4575 99.781 1 green simple sequence in gap
AL079306.3 RP11-216F9 fin GS AL162551.4 RP11-479H16 fin GS 13945 99.885 1 green  
AL162551.4 RP11-479H16 fin GS AL121576.5 RP11-476J6 fin GS 142423 99.827 17 green simple sequence in gap
AL121576.5 RP11-476J6 fin GS AL161415.2 RP11-139D16 fin GS 32083 99.850 7 red >0 gap of 50bp or more, not simple sequence
AL161415.2 RP11-139D16 fin GS AL359212.2 RP11-10A2 fin GS 41490 99.896 9 green simple sequence in gap
AL359212.2 RP11-10A2 fin GS AL359332.2 RP11-403E10 fin GS 81974 99.998 1 green simple sequence in gap
AL359332.2 RP11-403E10 fin GS AL512358.2 RP11-1150C11 fin GS 38434 99.917 9 green simple sequence in gap
AL512358.2 RP11-1150C11 fin GS AL358335.4 RP11-2G1 fin GS 28012 99.522 28 red >0 gap of 50bp or more, not simple sequence
AL358335.4 RP11-2G1 fin GS AL512359.2 RP11-286B5 fin GS 34662 99.980 6 green simple sequence in gap
AL512359.2 RP11-286B5 fin GS AL583762.1 RP11-1109N18 fin GS 531 100 0 green  
AL583762.1 RP11-1109N18 fin GS AL358336.4 RP11-514D2 fin GS 884 99.321 1 yellow half-dovetail of >0bp and <=50bp; identity < 99.6%
AL358336.4 RP11-514D2 fin GS AL512360.2 RP11-737F10 fin GS 50215 99.998 0 green  
AL512360.2 RP11-737F10 fin GS AL358338.3 CTD-2082C19 fin GS 11386 99.947 2 green simple sequence in gap
AL358338.3 CTD-2082C19 fin GS AL110505.5 RP11-816J8 fin GS 15954 99.856 15 red >2 gap of 25bp or more, not simple sequence
AL110505.5 RP11-816J8 fin GS AL358339.2 CTD-3172B5 fin GS 14516 99.897 2 green simple sequence in gap
AL358339.2 CTD-3172B5 fin GS AL512361.3 RP11-326E7 fin GS 64059 99.839 8 red >0 gap of 50bp or more, not simple sequence
AL512361.3 RP11-326E7 fin GS AL163612.5 RP11-346L24 fin GS 36309 99.854 18 yellow >0 gap of 25bp or more, not simple sequence
AL163612.5 RP11-346L24 fin GS AL139099.3 RP11-649E7 fin GS 8871 99.989 0 green  
AL139099.3 RP11-649E7 fin GS AL591767.2 RP11-831F12 fin GS 43951 99.882 18 green simple sequence in gap
AL591767.2 RP11-831F12 fin GS AL627171.1 RP11-596C23 fin GS 65375 99.953 1 green simple sequence in gap
AL627171.1 RP11-596C23 fin GS AL117692.5 RP11-58E21 fin GS 12266 99.682 15 yellow >0 gap of 25bp or more, not simple sequence
AL117692.5 RP11-58E21 fin GS AL109758.3 RP11-873E2 fin GS 11475 99.991 0 green  
AL109758.3 RP11-873E2 fin GS AL359397.3 RP11-247L20 fin GS 19581 100 0 green  
AL359397.3 RP11-247L20 fin GS AL118556.4 RP11-406H23 fin GS 14294 99.923 8 green simple sequence in gap
AL118556.4 RP11-406H23 fin GS AL606834.1 RP11-248J18 fin GS 14360 99.930 4 green simple sequence in gap
AL606834.1 RP11-248J18 fin GS AL133485.3 RP11-286O18 fin GS 17108 99.866 9 green simple sequence in gap
AL133485.3 RP11-286O18 fin GS AL358334.3 RP11-218E20 fin GS 3792 100 0 green  
AL358334.3 RP11-218E20 fin GS AL591770.3 RP11-1140I5 fin GS 7126 100 0 green  
AL591770.3 RP11-1140I5 fin GS AL591807.1 RP11-1047D15 fin GS 40628 99.997 2 green simple sequence in gap
AL591807.1 RP11-1047D15 fin GS AL358332.3 RP11-255G12 fin GS 4173 99.856 4 green simple sequence in gap
AL358332.3 RP11-255G12 fin GS AL122125.4 RP11-102G14 fin GS 3637 100 0 green  
AL122125.4 RP11-102G14 fin GS AL079307.7 RP11-280K24 fin GS 1171 100 0 green  
AL079307.7 RP11-280K24 fin GS AL358333.4 RP11-463J10 fin GS 23615 99.797 11 green simple sequence in gap
AL358333.4 RP11-463J10 fin GS AL118557.5 RP11-1033H12 fin GS 27775 99.831 6 green simple sequence in gap
AL118557.5 RP11-1033H12 fin GS AL365475.1 RP11-452D12 fin GS 23044 99.892 2 green  
AL365475.1 RP11-452D12 fin GS AL355833.4 RP11-262M8 fin GS 141227 99.875 43 green simple sequence in gap
AL355833.4 RP11-262M8 fin GS AL157971.4 RP11-933I1 fin GS 17754 99.983 1 green  
AL157971.4 RP11-933I1 fin GS AL133453.3 RP11-841O20 fin GS 50072 100 0 green  
AL133453.3 RP11-841O20 fin GS AL139317.5 RP11-589M4 fin GS 6835 99.898 1 green simple sequence in gap
AL139317.5 RP11-589M4 fin GS AL352979.4 RP11-368P15 fin GS 15965 100 1 green  
AL352979.4 RP11-368P15 fin GS AL356020.3 RP11-547D23 fin GS 21481 100 0 green  
AL356020.3 RP11-547D23 fin GS AL390799.4 RP11-21A20 fin GS 16859 100 0 green  
AL390799.4 RP11-21A20 fin GS AL365295.4 RP11-784H12 fin GS 27779 99.744 16 green simple sequence in gap
AL365295.4 RP11-784H12 fin GS AL445886.3 RP11-369B6 fin GS 25240 99.865 4 green simple sequence in gap
AL445886.3 RP11-369B6 fin GS AL163953.3 RP11-533L7 fin GS 119109 99.935 20 green simple sequence in gap
AL163953.3 RP11-533L7 fin GS AL162759.4 RP11-785G15 fin GS 11726 99.872 6 green simple sequence in gap
AL162759.4 RP11-785G15 fin GS AL138479.4 RP11-242G5 fin GS 13508 99.978 1 green  
AL138479.4 RP11-242G5 fin GS AL136297.3 RP11-60K23 fin GS 19181 100 0 green  
AL136297.3 RP11-60K23 fin GS AL356802.5 CTD-2137E9 fin GS 82343 99.924 21 yellow >0 gap of 25bp or more, not simple sequence
AL356802.5 CTD-2137E9 fin GS AL049778.3 RP11-643C12 fin GS 25723 99.903 8 green simple sequence in gap
AL049778.3 RP11-643C12 fin GS AL359792.3 RP11-794A8 fin GS 581 100 0 green  
AL359792.3 RP11-794A8 fin GS AL138994.5 CTD-2046P20 fin GS 31682 99.902 6 green simple sequence in gap
AL138994.5 CTD-2046P20 fin GS AL133444.4 RP11-724F15 fin GS 2993 99.967 1 green simple sequence in gap
AL133444.4 RP11-724F15 fin GS AL160471.5 RP11-304L20 fin GS 3188 100 0 green  
AL160471.5 RP11-304L20 fin GS AL352982.3 RP11-661F4 fin GS 136203 99.875 23 green simple sequence in gap
AL352982.3 RP11-661F4 fin GS AL139316.5 RP11-698F20 fin GS 20435 99.873 20 red >2 gap of 25bp or more, not simple sequence
AL139316.5 RP11-698F20 fin GS AL158801.4 RP11-665C16 fin GS 52257 99.920 14 green simple sequence in gap
AL158801.4 RP11-665C16 fin GS AL356801.5 RP11-454L9 fin GS 25069 100 0 green  
AL356801.5 RP11-454L9 fin GS AL138499.4 RP11-132J14 fin GS 12639 99.842 6 green simple sequence in gap
AL138499.4 RP11-132J14 fin GS AL355773.4 RP11-813I20 fin GS 11572 100 0 green  
AL355773.4 RP11-813I20 fin GS AL163952.5 RP11-1012E15 fin GS 9771 99.959 0 green  
AL163952.5 RP11-1012E15 fin GS AL138995.5 CTD-2588E21 fin GS 41551 99.483 21 yellow identity < 99.6%
AL138995.5 CTD-2588E21 fin GS AL355073.5 RP11-930O11 fin GS 1788 100 0 green  
AL355073.5 RP11-930O11 fin GS AL162633.3 RP11-210O8 fin GS 125595 99.901 36 green simple sequence in gap
AL162633.3 RP11-210O8 fin GS AL359234.4 CTD-2184N20 fin GS 33853 99.811 11 green simple sequence in gap
AL359234.4 CTD-2184N20 fin GS AL355103.3 RP11-624J12 fin GS 41702 99.835 11 green simple sequence in gap
AL355103.3 RP11-624J12 fin GS AL161757.4 RP11-1085N6 fin GS 3273 100 0 green  
AL161757.4 RP11-1085N6 fin GS AL162831.6 RP11-1077A2 fin GS 110844 99.907 33 green simple sequence in gap
AL162831.6 RP11-1077A2 fin GS AL137100.4 RP11-108M12 fin GS 42297 99.813 23 green simple sequence in gap
AL137100.4 RP11-108M12 fin GS AL391152.3 RP11-613G13 fin GS 61339 99.863 21 green simple sequence in gap
AL391152.3 RP11-613G13 fin GS AL139195.4 CTD-3009L15 fin GS 13518 100 3 green simple sequence in gap
AL139195.4 CTD-3009L15 fin GS AL355834.4 RP11-932A10 fin GS 18818 99.941 5 red >0 gap of 50bp or more, not simple sequence
AL355834.4 RP11-932A10 fin GS AL161804.4 RP11-409I10 fin GS 53791 99.931 6 green simple sequence in gap
AL161804.4 RP11-409I10 fin GS AL136520.3 CTD-2325K12 fin GS 26528 99.910 10 green simple sequence in gap
AL136520.3 CTD-2325K12 fin GS AL132668.4 RP11-550M19 fin GS 28220 99.798 12 green simple sequence in gap
AL132668.4 RP11-550M19 fin GS AL049838.3 RP11-999E24 fin GS 30460 99.901 0 green  
AL049838.3 RP11-999E24 fin GS AL121579.4 RP11-349A22 fin GS 16815 99.816 4 green simple sequence in gap
AL121579.4 RP11-349A22 fin GS AL132989.5 CTD-2002H8 fin GS 5562 99.928 3 green simple sequence in gap
AL132989.5 CTD-2002H8 fin GS AL139021.6 RP11-517O13 fin GS 14670 99.959 6 green simple sequence in gap
AL139021.6 RP11-517O13 fin GS AL135752.6 RP11-401H9 fin GS 74257 99.844 42 green simple sequence in gap
AL135752.6 RP11-401H9 fin GS AL133312.3 RP11-229B21 fin GS 95443 99.977 9 green simple sequence in gap
AL133312.3 RP11-229B21 fin GS AL121819.6 CTD-3201O4 fin GS 25433 99.917 10 green simple sequence in gap
AL121819.6 CTD-3201O4 fin GS AL049873.3 RP11-112J1 fin GS 1926 99.896 0 green  
AL049873.3 RP11-112J1 fin GS AL117356.5 RP11-606A16 fin GS 25182 99.841 6 green simple sequence in gap
AL117356.5 RP11-606A16 fin GS AL359219.4 CTD-2315A10 fin GS 1834 99.946 0 green  
AL359219.4 CTD-2315A10 fin GS AL133502.4 RP11-180L10 fin GS 2279 99.868 0 green  
AL133502.4 RP11-180L10 fin GS AL159140.4 RP11-131E8 fin GS 35148 99.949 8 green simple sequence in gap
AL159140.4 RP11-131E8 fin GS AL162471.3 RP11-882I14 fin GS 122861 99.518 83 red >0 gap of 500bp or more, not simple sequence
AL162471.3 RP11-882I14 fin GS AL121694.4 RP11-701B16 fin GS 25450 99.992 4 red >0 gap of 50bp or more, not simple sequence
AL121694.4 RP11-701B16 fin GS AL139194.7 CTD-2190G12 fin GS 2562 99.883 2 green simple sequence in gap
AL139194.7 CTD-2190G12 fin GS AL133299.4 RP11-62H20 fin GS 30888 99.971 4 green simple sequence in gap
AL133299.4 RP11-62H20 fin GS AL157911.4 RP11-16B13 fin GS 23676 99.899 3 green simple sequence in gap
AL157911.4 RP11-16B13 fin GS AL163853.4 RP11-248B10 fin GS 84402 99.838 37 red >2 gap of 25bp or more, not simple sequence
AL163853.4 RP11-248B10 fin GS AL157756.3 CTD-2184C24 fin GS 23415 99.923 6 green simple sequence in gap
AL157756.3 CTD-2184C24 fin GS AL132778.6 CTD-2568P8 fin GS 7315 99.658 1 green  
AL132778.6 CTD-2568P8 fin GS AL122057.4 RP11-246E14 fin GS 106057 99.846 39 green simple sequence in gap
AL122057.4 RP11-246E14 fin GS AL049874.3 RP11-1042B17 fin GS 4327 100 1 green  
AL049874.3 RP11-1042B17 fin GS AL132777.4 RP11-307P22 fin GS 32041 99.984 0 green  
AL132777.4 RP11-307P22 fin GS AL160236.4 RP11-193F5 fin GS 34767 100 0 green  
AL160236.4 RP11-193F5 fin GS AL160234.3 RP11-22F22 fin GS 442 100 0 green  
AL160234.3 RP11-22F22 fin GS AL359220.4 RP11-855C23 fin GS 48356 99.959 30 green simple sequence in gap
AL359220.4 RP11-855C23 fin GS AL138996.4 RP11-902B17 fin GS 3923 100 0 green  
AL138996.4 RP11-902B17 fin GS AL355916.2 RP11-47I22 fin GS 9478 100 0 green  
AL355916.2 RP11-47I22 fin GS AL137129.4 RP11-618G20 fin GS 61160 99.989 4 green simple sequence in gap
AL137129.4 RP11-618G20 fin GS AL137918.4 RP11-442G21 fin GS 3704 100 0 green  
AL137918.4 RP11-442G21 fin GS AL356018.5 CTD-2277K2 fin GS 28709 99.941 4 green simple sequence in gap
AL356018.5 CTD-2277K2 fin GS AL390816.4 RP11-355I22 fin GS 13865 99.820 4 green simple sequence in gap
AL390816.4 RP11-355I22 fin GS AL391154.4 RP11-413F8 fin GS 20540 100 1 green simple sequence in gap
AL391154.4 RP11-413F8 fin GS AL391155.3 RP11-559M6 fin GS 54829 99.985 1 green simple sequence in gap
AL391155.3 RP11-559M6 fin GS AL389895.3 RP11-395B20 fin GS 23069 100 3 green simple sequence in gap
AL389895.3 RP11-395B20 fin GS AL355101.2 RP11-686H21 fin GS 10104 100 0 green  
AL355101.2 RP11-686H21 fin GS AL109985.5 RP11-370E23 fin GS 30587 99.967 1 green  
AL109985.5 RP11-370E23 fin GS AL132666.8 RP11-16N22 fin GS 16178 99.864 3 green simple sequence in gap
AL132666.8 RP11-16N22 fin GS AL137191.5 RP11-1112J20 fin GS 19491 100 0 green  
AL137191.5 RP11-1112J20 fin GS AL049871.4 RP11-696D21 fin GS 58661 99.974 0 green  
AL049871.4 RP11-696D21 fin GS AL118555.6 CTD-2011M8 fin GS 28467 99.779 10 green simple sequence in gap
AL118555.6 CTD-2011M8 fin GS AL132992.4 CTD-2268P10 fin GS 48711 99.990 5 green simple sequence in gap
AL132992.4 CTD-2268P10 fin GS AL136038.5 CTD-2302E22 fin GS 2381 100 0 green  
AL136038.5 CTD-2302E22 fin GS AL161670.4 RP11-804M7 fin GS 15656 99.942 4 green  
AL161670.4 RP11-804M7 fin GS AL162832.6 RP11-544I20 fin GS 7333 99.973 0 green  
AL162832.6 RP11-544I20 fin GS AL359235.3 CTD-3078G23 fin GS 20762 99.706 13 green simple sequence in gap
AL359235.3 CTD-3078G23 fin GS AL355094.3 RP11-676P5 fin GS 32247 99.882 11 green simple sequence in gap
AL355094.3 RP11-676P5 fin GS AL161756.6 RP11-712C19 fin GS 31900 100 0 green  
AL161756.6 RP11-712C19 fin GS AL122035.6 CTD-2555O16 fin GS 42221 99.893 22 green simple sequence in gap
AL122035.6 CTD-2555O16 fin GS AL049869.6 RP11-973N13 fin GS 2592 99.923 0 green  
AL049869.6 RP11-973N13 fin GS AL121774.5 RP11-430G13 fin GS 16947 99.994 0 green  
AL121774.5 RP11-430G13 fin GS AL135745.5 CTD-2300N4 fin GS 33748 99.982 3 green simple sequence in gap
AL135745.5 CTD-2300N4 fin GS AL139022.4 RP11-840I19 fin GS 2850 99.930 0 green  
AL139022.4 RP11-840I19 fin GS AL355076.5 CTD-2509G16 fin GS 11745 99.668 10 green simple sequence in gap
AL355076.5 CTD-2509G16 fin GS AL359236.4 RP11-960H4 fin GS 71809 99.804 55 green simple sequence in gap
AL359236.4 RP11-960H4 fin GS AL355840.2 RP11-382E15 fin GS 42839 99.995 2 green  
AL355840.2 RP11-382E15 fin GS AL161871.6 RP11-66E7 fin GS 66207 100 2 green  
AL161871.6 RP11-66E7 fin GS AL109847.5 RP11-603H7 fin GS 42599 100 0 green  
AL109847.5 RP11-603H7 fin GS AL513142.3 RP11-423I17 fin GS 1385 99.928 0 green  
AL513142.3 RP11-423I17 fin GS AL928655.1 ? fin GS 2617 100 0 green  
AL928655.1 ? fin GS AL928760.1 ? fin GS 1458 100 1 green simple sequence in gap
AL928760.1 ? fin GS AL928766.1 ? fin GS 292 100 0 green  
AL928766.1 ? fin GS AL589183.2 CTD-2132D14 fin GS 2094 99.952 0 green  
AL589183.2 CTD-2132D14 fin GS AL391261.3 CTD-2014B16 fin GS 5434 99.982 1 green  
AL391261.3 CTD-2014B16 fin GS AL356021.4 RP11-783L4 fin GS 68038 99.990 5 green simple sequence in gap
AL356021.4 RP11-783L4 fin GS AL157997.5 RP11-50H7 fin GS 16993 100 0 green  
AL157997.5 RP11-50H7 fin GS AL359232.4 RP11-90C22 fin GS 40487 99.997 1 green  
AL359232.4 RP11-90C22 fin GS AL355093.3 RP11-72M17 fin GS 30499 99.990 1 green simple sequence in gap
AL355093.3 RP11-72M17 fin GS AL139295.6 RP11-61A17 fin GS 10461 99.943 0 green  
AL139295.6 RP11-61A17 fin GS AL133241.3 CTD-2560C21 fin GS 18228 99.989 0 green  
AL133241.3 CTD-2560C21 fin GS AL117667.4 CTD-2379B19 fin GS 3888 100 0 green  
AL117667.4 CTD-2379B19 fin GS AL049835.3 RP11-862P13 fin GS 27931 99.996 1 green simple sequence in gap
AL049835.3 RP11-862P13 fin GS AL159179.3 CTD-2282E14 fin GS 46052 99.987 2 green simple sequence in gap
AL159179.3 CTD-2282E14 fin GS AL135978.4 RP11-125H8 fin GS 2048 100 0 green  
AL135978.4 RP11-125H8 fin GS AL139785.5 RP11-156E22 fin GS 22577 99.747 9 green simple sequence in gap
AL139785.5 RP11-156E22 fin GS AL132640.4 RP11-643G16 fin GS 12096 99.777 13 green simple sequence in gap
AL132640.4 RP11-643G16 fin GS AL049779.6 RP11-1012A1 fin GS 16811 100 0 green  
AL049779.6 RP11-1012A1 fin GS AL121595.5 CTD-3225F7 fin GS 9545 99.832 3 green simple sequence in gap
AL121595.5 CTD-3225F7 fin GS AL133370.4 CTD-2566J3 fin GS 3873 100 0 green  
AL133370.4 CTD-2566J3 fin GS AL157915.3 RP11-68M10 fin GS 24512 99.841 5 green simple sequence in gap
AL157915.3 RP11-68M10 fin GS AL136294.4 CTD-2171B16 fin GS 52456 99.878 9 green simple sequence in gap
AL136294.4 CTD-2171B16 fin GS AL122013.5 RP11-204K16 fin GS 1264 99.842 1 green  
AL122013.5 RP11-204K16 fin GS AL589168.3 RP11-108B17 fin GS 15351 99.961 5 green simple sequence in gap
AL589168.3 RP11-108B17 fin GS AL121820.4 CTD-2325P2 fin GS 17075 99.813 4 green simple sequence in gap
AL121820.4 CTD-2325P2 fin GS AL133313.2 RP11-1082A1 fin GS 5593 99.875 1 green  
AL133313.2 RP11-1082A1 fin GS AL132986.4 RP11-723P16 fin GS 0 0 0 red more than one overlap present
AL132986.4 RP11-723P16 fin GS AL117694.5 RP11-226F19 fin GS 19656 99.832 7 green simple sequence in gap
AL117694.5 RP11-226F19 fin GS AL391262.3 RP11-817G13 fin GS 51390 99.899 20 green simple sequence in gap
AL391262.3 RP11-817G13 fin GS AL359317.3 RP11-363J20 fin GS 35158 99.923 12 green simple sequence in gap
AL359317.3 RP11-363J20 fin GS AL157996.8 CTD-2525P14 fin GS 23272 99.893 5 green  
AL157996.8 CTD-2525P14 fin GS AL133445.4 RP11-1046B16 fin GS 34317 99.915 16 green simple sequence in gap
AL133445.4 RP11-1046B16 fin GS AL355837.6 CTD-2216L1 fin GS 30225 99.940 8 green simple sequence in gap
AL355837.6 CTD-2216L1 fin GS AL157789.6 RP11-880O3 fin GS 62616 99.917 13 green simple sequence in gap
AL157789.6 RP11-880O3 fin GS AL135747.4 RP11-1023I22 fin GS 24209 99.781 6 green simple sequence in gap
AL135747.4 RP11-1023I22 fin GS AL160191.3 RP11-486O13 fin GS 20228 99.881 4 green simple sequence in gap
AL160191.3 RP11-486O13 fin GS AL356804.4 RP11-718G2 fin GS 7039 99.801 4 green simple sequence in gap
AL356804.4 RP11-718G2 fin GS AL391223.4 RP11-325N7 fin GS 907 100 0 green  
AL391223.4 RP11-325N7 fin GS AL357153.4 CTD-2540L5 fin GS 1079 99.907 0 yellow half-dovetail of >0bp and <=50bp
AL357153.4 CTD-2540L5 fin GS AC004816.1 RP6-65G23 fin WUGSC 6869 99.883 2 green simple sequence in gap
AC004816.1 RP6-65G23 fin WUGSC AC004818.1 RP6-152E21 fin WUGSC 200 100 0 green  
AC004818.1 RP6-152E21 fin WUGSC AC004825.2 RP1-292L20 fin WUGSC 200 100 0 green  
AC004825.2 RP1-292L20 fin WUGSC AL445903.3 RP11-164G17 fin GS 96470 99.852 41 red >0 gap of 50bp or more, not simple sequence
AL445903.3 RP11-164G17 fin GS AC005230.1 RP5-1163L11 fin WUGSC 24484 99.943 1 green simple sequence in gap
AC005230.1 RP5-1163L11 fin WUGSC AC004817.2 RP6-91H8 fin WUGSC 200 100 0 green  
AC004817.2 RP6-91H8 fin WUGSC AC005476.4 RP1-261D10 fin WUGSC 200 100 0 green  
AC005476.4 RP1-261D10 fin WUGSC AL391735.2 CTD-2380I20 fin GS 1200 99.417 2 yellow identity < 99.6%
AL391735.2 CTD-2380I20 fin GS AC005994.2 RP6-116J24 fin WUGSC 855 98.363 0 yellow half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000
AC005994.2 RP6-116J24 fin WUGSC AC004968.1 RP5-1119N5 fin WUGSC 200 100 0 green  
AC004968.1 RP5-1119N5 fin WUGSC AC004974.1 RP5-1140G11 fin WUGSC 200 100 0 green  
AC004974.1 RP5-1140G11 fin WUGSC AC004900.2 RP4-816G1 fin WUGSC 200 100 0 green  
AC004900.2 RP4-816G1 fin WUGSC AL391749.4 RP11-233L14 fin GS 54902 99.922 11 green simple sequence in gap
AL391749.4 RP11-233L14 fin GS AC005993.2 RP6-114E22 fin WUGSC 108969 99.791 43 yellow >0 gap of 25bp or more, not simple sequence
AC005993.2 RP6-114E22 fin WUGSC AC005477.1 RP1-283M22 fin WUGSC 200 100 0 green  
AC005477.1 RP1-283M22 fin WUGSC AC005227.2 RP5-1003N18 fin WUGSC 200 100 0 green  
AC005227.2 RP5-1003N18 fin WUGSC AC005857.1 RP4-809F18 fin BCM 62877 99.998 1 yellow half-dovetail of >0bp and <=50bp
AC005857.1 RP4-809F18 fin BCM AC005226.1 RP4-683L10 fin WUGSC 39779 99.834 4 yellow half-dovetail of >0bp and <=50bp
AC005226.1 RP4-683L10 fin WUGSC AC005157.1 RP5-1108A12 fin WUGSC 200 100 0 green  
AC005157.1 RP5-1108A12 fin WUGSC AC005533.2 RP4-794K21 fin WUGSC 200 100 0 green  
AC005533.2 RP4-794K21 fin WUGSC AC004828.2 RP3-514A23 fin WUGSC 200 100 0 green  
AC004828.2 RP3-514A23 fin WUGSC AL392024.3 RP11-182E21 fin GS 111009 99.759 37 green simple sequence in gap
AL392024.3 RP11-182E21 fin GS AC006360.2 RP5-1140N14 fin WUGSC 8203 99.927 3 green simple sequence in gap
AC006360.2 RP5-1140N14 fin WUGSC AC007160.3 RP1-146I3 fin WUGSC 200 100 0 green  
AC007160.3 RP1-146I3 fin WUGSC AL442663.3 RP11-109N23 fin GS 2599 100 0 green  
AL442663.3 RP11-109N23 fin GS AC004858.2 RP4-687K1 fin WUGSC 28041 99.772 10 green simple sequence in gap
AC004858.2 RP4-687K1 fin WUGSC AC004846.2 RP4-647C14 fin WUGSC 200 100 0 green  
AC004846.2 RP4-647C14 fin WUGSC AL391733.3 RP11-135J13 fin GS 1257 99.920 0 green  
AL391733.3 RP11-135J13 fin GS AC005280.3 RP1-240K6 fin WUGSC 285 100 0 green  
AC005280.3 RP1-240K6 fin WUGSC AC005225.2 RP3-414A15 fin WUGSC 200 100 0 green  
AC005225.2 RP3-414A15 fin WUGSC AC006146.2 RP4-693M11 fin WUGSC 200 100 0 green  
AC006146.2 RP4-693M11 fin WUGSC AC005520.2 RP5-1021I20 fin WUGSC 200 100 0 green  
AC005520.2 RP5-1021I20 fin WUGSC AC005480.3 RP4-592G7 fin WUGSC 200 100 0 green  
AC005480.3 RP4-592G7 fin WUGSC AC005484.2 RP5-847O8 fin WUGSC 200 100 0 green  
AC005484.2 RP5-847O8 fin WUGSC AC006349.3 RP5-892G5 fin WUGSC 200 100 0 green  
AC006349.3 RP5-892G5 fin WUGSC AC005519.4 RP5-919J22 fin WUGSC 200 100 0 yellow alignment length < 2000
AC005519.4 RP5-919J22 fin WUGSC AC005479.2 RP3-449M8 fin WUGSC 200 100 0 yellow alignment length < 2000
AC005479.2 RP3-449M8 fin WUGSC AC013451.8 CTD-2207P18 fin UWMSC 22998 99.817 5 green simple sequence in gap
AC013451.8 CTD-2207P18 fin UWMSC AC007956.5 RP11-173A8 fin UWMSC 6112 100 0 green  
AC007956.5 RP11-173A8 fin UWMSC AC006530.4 RP11-316E14 fin UWMSC 1174 99.915 1 green simple sequence in gap
AC006530.4 RP11-316E14 fin UWMSC AL049780.4 RP11-950C14 fin GS 86699 99.887 30 red >0 gap of 50bp or more, not simple sequence
AL049780.4 RP11-950C14 fin GS AL691403.2 CTD-3075F15 fin GS 57847 99.889 22 green simple sequence in gap
AL691403.2 CTD-3075F15 fin GS AF111167.2 RP11-293M10 unk UWGC 30692 99.974 4 green simple sequence in gap
AF111167.2 RP11-293M10 unk UWGC AC009363.4 CTD-2317F5 fin UWMSC 13929 99.914 1 green  
AC009363.4 CTD-2317F5 fin UWMSC AC007182.3 RP11-507E23 fin UWMSC 38623 99.915 11 green simple sequence in gap
AC007182.3 RP11-507E23 fin UWMSC AC009399.5 RP11-368K8 fin UWMSC 5672 99.929 0 green  
AC009399.5 RP11-368K8 fin UWMSC AF107885.2 RP11-270M14 unk UWGC 42890 99.923 11 green simple sequence in gap
AF107885.2 RP11-270M14 unk UWGC AC008015.5 RP11-98L12 fin UWMSC 8218 100 0 green  
AC008015.5 RP11-98L12 fin UWMSC AC016526.6 RP11-361H10 fin UWMSC 49248 99.781 18 green simple sequence in gap
AC016526.6 RP11-361H10 fin UWMSC AC016543.6 RP11-516J2 fin UWMSC 2728 99.890 1 green simple sequence in gap
AC016543.6 RP11-516J2 fin UWMSC AC008050.6 RP11-187O7 fin UWMSC 6116 99.885 2 green simple sequence in gap
AC008050.6 RP11-187O7 fin UWMSC AC007376.9 RP11-99E15 fin UWMSC 62482 99.995 3 green  
AC007376.9 RP11-99E15 fin UWMSC AF111169.2 RP11-488C13 fin UWMSC 14878 100 0 green  
AF111169.2 RP11-488C13 fin UWMSC AC007686.5 RP11-7F17 fin UWMSC 17401 99.885 6 green simple sequence in gap
AC007686.5 RP11-7F17 fin UWMSC AC007375.6 RP11-463C8 fin UWMSC 1759 100 0 green  
AC007375.6 RP11-463C8 fin UWMSC AC007954.7 RP11-493G17 fin UWMSC 84410 99.809 26 green simple sequence in gap
AC007954.7 RP11-493G17 fin UWMSC AF111168.2 RP11-501I4 unk UWMSC 25632 99.945 8 red >0 gap of 50bp or more, not simple sequence
AF111168.2 RP11-501I4 unk UWMSC AC008044.4 CTD-2175M1 fin UWMSC 21021 99.886 12 green simple sequence in gap
AC008044.4 CTD-2175M1 fin UWMSC AC008372.6 RP11-61F4 fin UWMSC 24234 99.823 10 green simple sequence in gap
AC008372.6 RP11-61F4 fin UWMSC AL049832.3 RP11-63D17 fin GS 17298 100 0 green  
AL049832.3 RP11-63D17 fin GS AC007955.4 CTD-3014H8 fin UWMSC 116752 99.867 18 green simple sequence in gap
AC007955.4 CTD-3014H8 fin UWMSC AF099810.1 RP11-332E19 unk UWGC 25593 99.910 8 yellow >0 gap of 25bp or more, not simple sequence
AF099810.1 RP11-332E19 unk UWGC AC007056.4 RP11-31E9 fin UWMSC 23232 99.832 4 green simple sequence in gap
AC007056.4 RP11-31E9 fin UWMSC AC008045.5 CTD-2552H2 fin UWMSC 10781 99.972 1 green simple sequence in gap
AC008045.5 CTD-2552H2 fin UWMSC AC009396.5 RP11-232C2 fin UWMSC 4439 100 1 green simple sequence in gap
AC009396.5 RP11-232C2 fin UWMSC AC011440.5 RP11-23H16 fin UWMSC 7935 99.987 0 green  
AC011440.5 RP11-23H16 fin UWMSC AC026888.6 CTD-2243E23 fin UWMSC 49105 99.994 2 green simple sequence in gap
AC026888.6 CTD-2243E23 fin UWMSC AC022469.5 RP11-588P7 fin UWMSC 28098 99.758 7 green simple sequence in gap
AC022469.5 RP11-588P7 fin UWMSC AC018514.7 RP11-76C24 fin UWMSC 6195 99.984 2 green simple sequence in gap
AC018514.7 RP11-76C24 fin UWMSC AC012099.4 RP11-45G3 fin UWMSC 10960 99.790 5 green simple sequence in gap
AC012099.4 RP11-45G3 fin UWMSC AC008056.6 RP11-242P2 fin UWMSC 4664 99.893 2 green simple sequence in gap
AC008056.6 RP11-242P2 fin UWMSC AC007058.2 CTD-2294M16 fin UWMSC 17014 99.924 4 green simple sequence in gap
AC007058.2 CTD-2294M16 fin UWMSC AF123462.1 RP11-526N18 unk UWMSC 1698 99.941 0 yellow alignment length < 2000
AF123462.1 RP11-526N18 unk UWMSC AC007514.5 RP11-396N8 fin UWMSC 8134 99.865 1 green simple sequence in gap
AC007514.5 RP11-396N8 fin UWMSC AC007372.4 RP11-115A24 fin UWMSC 890 100 0 green  
AC007372.4 RP11-115A24 fin UWMSC AL049837.4 RP11-959A22 fin GS 148321 99.999 2 green simple sequence in gap
AL049837.4 RP11-959A22 fin GS AC010849.3 CTD-2540C19 fin UWMSC 20361 99.931 4 green simple sequence in gap
AC010849.3 CTD-2540C19 fin UWMSC AC018513.5 RP11-58H3 fin UWMSC 15248 100 1 green  
AC018513.5 RP11-58H3 fin UWMSC AC022404.7 RP11-757H14 fin UWMSC 7262 99.849 8 green simple sequence in gap
AC022404.7 RP11-757H14 fin UWMSC AC010072.5 CTD-2173I4 fin UWMSC 8355 99.821 2 green simple sequence in gap
AC010072.5 CTD-2173I4 fin UWMSC AC007262.4 RP11-114N19 fin UWMSC 14710 99.857 3 green simple sequence in gap
AC007262.4 RP11-114N19 fin UWMSC AC010582.6 CTD-2547F10 fin UWMSC 623 100 0 green  
AC010582.6 CTD-2547F10 fin UWMSC AL136040.5 CTD-2506P8 fin GS 190932 99.998 0 green  
AL136040.5 CTD-2506P8 fin GS AL121769.4 RP11-299L17 fin GS 1100 99.909 0 green  
AL121769.4 RP11-299L17 fin GS AL136039.4 RP11-799P8 fin GS 6364 100 0 green  
AL136039.4 RP11-799P8 fin GS AL160192.3 RP11-226P1 fin GS 936 100 1 green simple sequence in gap
AL160192.3 RP11-226P1 fin GS AL355838.3 RP11-705B14 fin GS 21866 99.995 0 green  
AL355838.3 RP11-705B14 fin GS AL358275.4 RP11-666E17 fin GS 15968 99.731 18 green simple sequence in gap
AL358275.4 RP11-666E17 fin GS AL162811.6 RP11-101G3 fin GS 2742 100 0 green  
AL162811.6 RP11-101G3 fin GS AL357095.4 RP11-48D2 fin GS 25329 99.870 11 red >2 gap of 25bp or more, not simple sequence
AL357095.4 RP11-48D2 fin GS AL356799.3 RP11-63P7 fin GS 31163 99.859 7 green simple sequence in gap
AL356799.3 RP11-63P7 fin GS AL390076.4 CTD-2007P7 fin GS 22828 99.904 3 green simple sequence in gap
AL390076.4 CTD-2007P7 fin GS AL163171.4 RP11-406A9 fin GS 46539 99.789 44 green simple sequence in gap
AL163171.4 RP11-406A9 fin GS AL355095.4 RP11-11K13 fin GS 66075 99.891 17 green simple sequence in gap
AL355095.4 RP11-11K13 fin GS AL359238.4 RP11-452D21 fin GS 14189 99.887 5 green simple sequence in gap
AL359238.4 RP11-452D21 fin GS AL162872.4 RP11-764E10 fin GS 34185 99.892 8 green simple sequence in gap
AL162872.4 RP11-764E10 fin GS AL163613.2 RP11-25I19 fin GS 12091 99.859 2 green simple sequence in gap
AL163613.2 RP11-25I19 fin GS AL355072.3 RP11-135B15 fin GS 10925 100 0 green  
AL355072.3 RP11-135B15 fin GS AL356032.4 RP11-802A16 fin GS 30923 99.880 9 green simple sequence in gap
AL356032.4 RP11-802A16 fin GS AL355887.4 RP11-179O11 fin GS 74849 99.895 24 green simple sequence in gap
AL355887.4 RP11-179O11 fin GS AL161713.4 RP11-22K10 fin GS 9552 99.874 3 green simple sequence in gap
AL161713.4 RP11-22K10 fin GS AL391732.3 CTD-2290I17 fin GS 474 100 0 green  
AL391732.3 CTD-2290I17 fin GS AL162891.4 RP11-353P15 fin GS 840 100 0 green  
AL162891.4 RP11-353P15 fin GS AL356807.3 CTD-2335K5 fin GS 14160 99.993 0 green  
AL356807.3 CTD-2335K5 fin GS AL390802.2 CTD-2320B12 fin GS 32161 99.919 8 yellow >0 gap of 25bp or more, not simple sequence
AL390802.2 CTD-2320B12 fin GS AL583743.3 RP11-236M11 fin GS 31651 99.877 5 green simple sequence in gap
AL583743.3 RP11-236M11 fin GS AL583742.2 RP11-318A9 fin GS 96855 99.909 5 green  
AL583742.2 RP11-318A9 fin GS AL512311.3 RP11-338B12 fin GS 25528 99.984 1 green  
AL512311.3 RP11-338B12 fin GS AL445385.4 RP11-126I9 fin GS 15681 100 0 green  
AL445385.4 RP11-126I9 fin GS AL513143.3 RP11-611H21 fin GS 1861 99.946 2 green simple sequence in gap
AL513143.3 RP11-611H21 fin GS AL157690.7 RP11-565E24 fin GS 120677 99.887 40 green simple sequence in gap
AL157690.7 RP11-565E24 fin GS AL163642.4 RP11-688D15 fin GS 871 100 0 green  
AL163642.4 RP11-688D15 fin GS AL357172.3 RP11-789A21 fin GS 1164 100 0 green  
AL357172.3 RP11-789A21 fin GS AL157957.4 RP11-969O13 fin GS 67946 99.806 29 green simple sequence in gap
AL157957.4 RP11-969O13 fin GS AL133369.4 CTD-2128A3 fin GS 25058 99.988 1 green simple sequence in gap
AL133369.4 CTD-2128A3 fin GS AL049775.2 RP11-497E19 fin GS 27446 99.891 5 green simple sequence in gap
AL049775.2 RP11-497E19 fin GS AL132641.3 CTD-3175A2 fin GS 17176 99.744 9 green simple sequence in gap
AL132641.3 CTD-3175A2 fin GS AL137228.4 RP11-369N15 fin GS 39526 99.815 6 green simple sequence in gap
AL137228.4 RP11-369N15 fin GS AL357092.4 RP11-1079H9 fin GS 12208 99.951 6 green simple sequence in gap
AL357092.4 RP11-1079H9 fin GS AL445593.3 CTD-2341M24 fin GS 17476 99.880 4 green simple sequence in gap
AL445593.3 CTD-2341M24 fin GS AL359239.4 RP11-432I6 fin GS 28165 99.915 14 green simple sequence in gap
AL359239.4 RP11-432I6 fin GS AL161753.4 RP11-26L16 fin GS 54804 99.980 1 green simple sequence in gap
AL161753.4 RP11-26L16 fin GS AL359333.6 RP11-478J3 fin GS 43217 99.815 10 green simple sequence in gap
AL359333.6 RP11-478J3 fin GS AL359680.4 RP11-716B8 fin GS 97389 99.968 10 green simple sequence in gap
AL359680.4 RP11-716B8 fin GS AL356016.2 RP11-96H16 fin GS 38746 99.936 8 yellow >0 gap of 25bp or more, not simple sequence
AL356016.2 RP11-96H16 fin GS AL365294.4 RP11-746E9 fin GS 44704 99.989 2 green simple sequence in gap
AL365294.4 RP11-746E9 fin GS AL391517.3 RP11-322L20 fin GS 7717 99.961 1 green  
AL391517.3 RP11-322L20 fin GS AL358292.4 RP11-736P16 fin GS 40594 99.975 4 green simple sequence in gap
AL358292.4 RP11-736P16 fin GS AL352955.7 RP11-1141N12 fin GS 11373 100 0 green  
AL352955.7 RP11-1141N12 fin GS AL157688.4 RP11-594C13 fin GS 30053 99.584 7 yellow identity < 99.6%
AL157688.4 RP11-594C13 fin GS AL135746.3 RP11-325D8 fin GS 44982 99.987 2 green  
AL135746.3 RP11-325D8 fin GS AL158059.3 CTD-2007A10 fin GS 33770 99.935 7 green simple sequence in gap
AL158059.3 CTD-2007A10 fin GS AL359237.4 RP11-1152H15 fin GS 47161 99.934 9 red >0 gap of 50bp or more, not simple sequence
AL359237.4 RP11-1152H15 fin GS AL136501.4 RP11-804L24 fin GS 12189 99.902 2 green simple sequence in gap
AL136501.4 RP11-804L24 fin GS AL157955.5 RP11-300J18 fin GS 18028 99.883 2 green simple sequence in gap
AL157955.5 RP11-300J18 fin GS AL133279.7 RP11-753D20 fin GS 32018 99.912 6 red >0 gap of 50bp or more, not simple sequence
AL133279.7 RP11-753D20 fin GS AL049834.3 RP11-556K1 fin GS 482 100 0 green  
AL049834.3 RP11-556K1 fin GS AL162171.4 RP11-507K2 fin GS 18420 100 0 green  
AL162171.4 RP11-507K2 fin GS AL121768.4 RP11-976B16 fin GS 27257 99.923 6 green simple sequence in gap
AL121768.4 RP11-976B16 fin GS AL133238.3 CTD-2510G9 fin GS 15422 99.922 2 green simple sequence in gap
AL133238.3 CTD-2510G9 fin GS AL137785.6 RP11-151G14 fin GS 17310 99.879 5 green simple sequence in gap
AL137785.6 RP11-151G14 fin GS AL138478.3 RP11-681H18 fin GS 114989 99.928 34 green simple sequence in gap
AL138478.3 RP11-681H18 fin GS AL357093.4 RP11-356K23 fin GS 12229 100 0 green  
AL357093.4 RP11-356K23 fin GS AL157736.3 RP11-945C20 fin GS 111096 99.764 22 green simple sequence in gap
AL157736.3 RP11-945C20 fin GS AL356805.5 RP11-33N16 fin GS 87478 99.946 6 green simple sequence in gap
AL356805.5 RP11-33N16 fin GS AL163032.3 CTD-2303B20 fin GS 46604 99.897 13 green simple sequence in gap
AL163032.3 CTD-2303B20 fin GS AL137230.3 RP11-944C7 fin GS 10769 99.907 7 red >0 gap of 50bp or more, not simple sequence
AL137230.3 RP11-944C7 fin GS AL163011.3 CTD-2324M15 fin GS 11833 99.966 2 green simple sequence in gap
AL163011.3 CTD-2324M15 fin GS AL137128.4 RP11-951P22 fin GS 21056 99.891 7 green simple sequence in gap
AL137128.4 RP11-951P22 fin GS AL355074.5 RP11-750I4 fin GS 9425 99.926 2 green simple sequence in gap
AL355074.5 RP11-750I4 fin GS AL161662.6 RP11-439L12 fin GS 87285 100 2 green  
AL161662.6 RP11-439L12 fin GS AL512791.3 RP11-471B22 fin GS 49380 99.984 4 green  
AL512791.3 RP11-471B22 fin GS AL096869.8 RP11-1078H9 fin GS 90535 99.832 44 yellow >0 gap of 25bp or more, not simple sequence
AL096869.8 RP11-1078H9 fin GS AL139193.4 RP11-661G16 fin GS 90587 99.898 16 green simple sequence in gap
AL139193.4 RP11-661G16 fin GS AL122020.5 CTD-3035D6 fin GS 22741 99.758 12 red >0 gap of 50bp or more, not simple sequence
AL122020.5 CTD-3035D6 fin GS AL159191.4 CTD-2148L10 fin GS 60949 99.897 18 green simple sequence in gap
AL159191.4 CTD-2148L10 fin GS AL133454.6 RP11-580E16 fin GS 14802 99.966 6 green simple sequence in gap
AL133454.6 RP11-580E16 fin GS AL121784.5 RP11-305I3 fin GS 11976 99.866 10 green simple sequence in gap
AL121784.5 RP11-305I3 fin GS AL135818.3 CTD-2547L24 fin GS 10867 99.844 3 green simple sequence in gap
AL135818.3 CTD-2547L24 fin GS AL133153.3 RP11-895M11 fin GS 115299 99.899 25 green simple sequence in gap
AL133153.3 RP11-895M11 fin GS AL133373.5 RP11-248B24 fin GS 21830 100 0 green  
AL133373.5 RP11-248B24 fin GS AL121839.3 RP11-747H7 fin GS 21578 99.741 7 red >0 gap of 50bp or more, not simple sequence
AL121839.3 RP11-747H7 fin GS AL590328.2 RP11-818K5 fin GS 71190 99.979 3 green  
AL590328.2 RP11-818K5 fin GS AL049872.3 RP11-529H20 fin GS 37535 99.845 14 green simple sequence in gap
AL049872.3 RP11-529H20 fin GS AL121773.5 RP11-472N19 fin GS 15125 100 0 green  
AL121773.5 RP11-472N19 fin GS AL133240.4 RP11-639F2 fin GS 122369 99.864 23 green simple sequence in gap
AL133240.4 RP11-639F2 fin GS AL118559.6 RP11-618B21 fin GS 14930 99.966 1 green  
AL118559.6 RP11-618B21 fin GS AL159141.5 RP11-828K24 fin GS 28492 99.990 2 green  
AL159141.5 RP11-828K24 fin GS AL136332.5 RP11-807G16 fin GS 106550 99.963 11 red >0 gap of 500bp or more
AL136332.5 RP11-807G16 fin GS AL132987.4 RP11-188I13 fin GS 36437 99.882 14 green simple sequence in gap
AL132987.4 RP11-188I13 fin GS AL117192.5 RP11-862G15 fin GS 6364 99.953 0 green  
AL117192.5 RP11-862G15 fin GS AL110118.7 RP11-371E8 fin GS 59406 99.923 11 red >0 gap of 50bp or more, not simple sequence
AL110118.7 RP11-371E8 fin GS AL132838.4 RP11-85G20 fin GS 5111 99.863 3 green simple sequence in gap
AL132838.4 RP11-85G20 fin GS AL122023.3 RP11-120E11 fin GS 116533 99.987 7 green  
AL122023.3 RP11-120E11 fin GS AL136338.4 CTD-2022M23 fin GS 2947 100 0 green  
AL136338.4 CTD-2022M23 fin GS AL157858.5 RP11-187A6 fin GS 8332 99.976 2 green simple sequence in gap
AL157858.5 RP11-187A6 fin GS AL132642.4 RP11-131H24 fin GS 1594 100 0 green  
AL132642.4 RP11-131H24 fin GS AL079302.7 RP11-1089B7 fin GS 34451 99.994 1 green  
AL079302.7 RP11-1089B7 fin GS AL121838.4 CTD-2068J7 fin GS 8149 99.939 4 green simple sequence in gap
AL121838.4 CTD-2068J7 fin GS AL117259.6 RP11-304M6 fin GS 13161 99.871 2 green simple sequence in gap
AL117259.6 RP11-304M6 fin GS AL132708.3 RP11-349I1 fin GS 21414 99.897 3 green simple sequence in gap
AL132708.3 RP11-349I1 fin GS AL132990.4 RP11-262P9 fin GS 105807 99.980 6 yellow >0 gap of 25bp or more, not simple sequence
AL132990.4 RP11-262P9 fin GS AL049839.3 RP11-986E7 fin GS 36952 99.997 1 green simple sequence in gap
AL049839.3 RP11-986E7 fin GS AL121612.5 RP11-179A9 fin GS 28540 100 0 green  
AL121612.5 RP11-179A9 fin GS AL391542.2 RP11-1101H7 fin GS 555 100 0 green  
AL391542.2 RP11-1101H7 fin GS AL390254.6 RP11-991C1 fin GS 380 100 0 green  
AL390254.6 RP11-991C1 fin GS AL356017.3 CTD-2240H23 fin GS 22742 99.908 4 green simple sequence in gap
AL356017.3 CTD-2240H23 fin GS AL117187.7 RP11-725G5 fin GS 73636 99.934 11 green simple sequence in gap
AL117187.7 RP11-725G5 fin GS AL138539.7 CTD-2588C21 fin GS 840 100 0 green  
AL138539.7 CTD-2588C21 fin GS AL133467.4 RP11-1070N10 fin GS 9774 99.990 1 green simple sequence in gap
AL133467.4 RP11-1070N10 fin GS AL139020.5 RP11-164H13 fin GS 36197 99.727 12 green simple sequence in gap
AL139020.5 RP11-164H13 fin GS AL133167.4 RP11-185P18 fin GS 1700 100 0 green  
AL133167.4 RP11-185P18 fin GS AL137190.5 RP11-241N4 fin GS 686 100 0 green  
AL137190.5 RP11-241N4 fin GS AL355102.5 RP11-404P21 fin GS 44638 99.937 2 green  
AL355102.5 RP11-404P21 fin GS AL359240.4 RP11-103F13 fin GS 8610 99.872 2 green simple sequence in gap
AL359240.4 RP11-103F13 fin GS AL163051.5 RP11-872J21 fin GS 40804 100 1 green simple sequence in gap
AL163051.5 RP11-872J21 fin GS AL137786.3 RP11-433J8 fin GS 27153 100 1 green simple sequence in gap
AL137786.3 RP11-433J8 fin GS AL133168.6 RP11-187K17 fin GS 16002 99.994 0 green  
AL133168.6 RP11-187K17 fin GS AL049833.5 RP11-907D1 fin GS 31052 99.842 20 green simple sequence in gap
AL049833.5 RP11-907D1 fin GS AL158800.6 RP11-359N5 fin GS 10860 99.917 0 green  
AL158800.6 RP11-359N5 fin GS AL352976.3 RP11-487K10 fin GS 17229 99.872 5 green simple sequence in gap
AL352976.3 RP11-487K10 fin GS AL445885.1 CTD-2506J14 fin GS 80880 99.954 16 green simple sequence in gap
AL445885.1 CTD-2506J14 fin GS AL355098.3 RP11-241E13 fin GS 76145 99.894 16 green simple sequence in gap
AL355098.3 RP11-241E13 fin GS AL163872.2 RP11-76E12 fin GS 88197 99.964 10 green simple sequence in gap
AL163872.2 RP11-76E12 fin GS AL391015.3 RP11-363M17 fin GS 589 99.321 0 yellow half-dovetail of >0bp and <=50bp; identity < 99.6%
AL391015.3 RP11-363M17 fin GS AL355097.5 RP11-204N11 fin GS 789 99.620 0 green  
AL355097.5 RP11-204N11 fin GS AL445594.3 RP11-74H1 fin GS 58641 99.685 27 green simple sequence in gap
AL445594.3 RP11-74H1 fin GS AL352981.4 RP11-15E14 fin GS 89559 99.792 37 green simple sequence in gap
AL352981.4 RP11-15E14 fin GS AL163932.5 RP11-61O1 fin GS 11171 99.982 1 green simple sequence in gap
AL163932.5 RP11-61O1 fin GS AL391153.3 CTD-2576L4 fin GS 51948 99.994 4 green simple sequence in gap
AL391153.3 CTD-2576L4 fin GS AL163760.4 RP11-68I8 fin GS 25200 99.790 15 red >0 gap of 50bp or more, not simple sequence
AL163760.4 RP11-68I8 fin GS AL132719.4 RP11-1082A3 fin GS 9897 99.768 3 green simple sequence in gap
AL132719.4 RP11-1082A3 fin GS AL096821.3 RP11-677J5 fin GS 19944 99.744 4 green  
AL096821.3 RP11-677J5 fin GS AL132796.4 RP11-1127D7 fin GS 40025 99.982 3 green  
AL132796.4 RP11-1127D7 fin GS AL162151.5 CTD-3104H21 fin GS 1520 99.934 0 green  
AL162151.5 CTD-3104H21 fin GS AL359681.5 CTD-2348N10 fin GS 34100 99.936 10 green simple sequence in gap
AL359681.5 CTD-2348N10 fin GS AL109767.7 RP11-889B13 fin GS 13487 99.881 7 green simple sequence in gap
AL109767.7 RP11-889B13 fin GS AL132819.6 CTD-2200A16 fin GS 115013 99.796 79 yellow >0 gap of 25bp or more, not simple sequence
AL132819.6 CTD-2200A16 fin GS AL110504.6 RP11-688G15 fin GS 384 99.740 0 green  
AL110504.6 RP11-688G15 fin GS AL160313.4 RP11-543C4 fin GS 105323 99.989 4 green simple sequence in gap
AL160313.4 RP11-543C4 fin GS AL136000.4 RP11-860P2 fin GS 11822 99.983 2 green  
AL136000.4 RP11-860P2 fin GS AL133368.6 RP11-436M15 fin GS 33030 99.876 8 green simple sequence in gap
AL133368.6 RP11-436M15 fin GS AL157912.5 CTD-2376I20 fin GS 66241 99.820 33 red >0 gap of 50bp or more, not simple sequence
AL157912.5 CTD-2376I20 fin GS AL133523.5 RP11-775G15 fin GS 22669 99.828 4 green simple sequence in gap
AL133523.5 RP11-775G15 fin GS AL157871.5 RP11-638I2 fin GS 43471 99.857 20 green simple sequence in gap
AL157871.5 RP11-638I2 fin GS AL135838.6 RP11-362L22 fin GS 106496 99.972 12 green  
AL135838.6 RP11-362L22 fin GS AL845552.2 CTD-2062F14 fin GS 1511 100 0 green  
AL845552.2 CTD-2062F14 fin GS AL163974.7 CTD-2644I21 fin GS 2774 99.892 0 green  
AL163974.7 CTD-2644I21 fin GS AL132711.5 RP11-566J3 fin GS 69054 99.817 24 yellow >0 gap of 25bp or more, not simple sequence
AL132711.5 RP11-566J3 fin GS AL117190.6 RP11-123M6 fin GS 10425 99.875 1 green  
AL117190.6 RP11-123M6 fin GS AL132709.5 RP11-909M7 fin GS 3875 100 0 green  
AL132709.5 RP11-909M7 fin GS AL355836.3 RP11-8L8 fin GS 23916 99.996 1 green  
AL355836.3 RP11-8L8 fin GS AL359682.4 CTD-2561F5 fin GS 56247 99.922 11 red >0 gap of 50bp or more, not simple sequence
AL359682.4 CTD-2561F5 fin GS AL355096.4 RP11-168L7 fin GS 3909 100 0 green  
AL355096.4 RP11-168L7 fin GS AL049836.3 RP11-1029J19 fin GS 64329 99.989 2 green simple sequence in gap
AL049836.3 RP11-1029J19 fin GS AL355032.6 RP11-796G6 fin GS 118800 99.954 18 green simple sequence in gap
AL355032.6 RP11-796G6 fin GS AL137779.6 CTD-2017C7 fin GS 47395 99.804 20 red >0 gap of 50bp or more, not simple sequence
AL137779.6 CTD-2017C7 fin GS AL118558.6 RP11-1017G21 fin GS 6884 99.985 0 green  
AL118558.6 RP11-1017G21 fin GS AL133223.5 RP11-114H15 fin GS 26770 99.922 8 green simple sequence in gap
AL133223.5 RP11-114H15 fin GS AL359402.3 CTD-2273N11 fin GS 62614 99.890 33 green simple sequence in gap
AL359402.3 CTD-2273N11 fin GS AL352978.6 CTD-3059L23 fin GS 39784 99.987 4 green simple sequence in gap
AL352978.6 CTD-3059L23 fin GS AL137229.4 CTD-2246N19 fin GS 12217 99.984 1 green simple sequence in gap
AL137229.4 CTD-2246N19 fin GS AL136293.5 CTD-2555C10 fin GS 31139 99.916 4 green simple sequence in gap
AL136293.5 CTD-2555C10 fin GS AL132801.5 RP11-661D19 fin GS 16519 99.885 8 green simple sequence in gap
AL132801.5 RP11-661D19 fin GS AL117209.7 RP11-365N19 fin GS 15607 100 0 green  
AL117209.7 RP11-365N19 fin GS AL133455.4 CTD-2538G10 fin GS 20988 99.938 3 green simple sequence in gap
AL133455.4 CTD-2538G10 fin GS AL161669.5 RP11-736N17 fin GS 12277 99.927 2 green  
AL161669.5 RP11-736N17 fin GS AL138976.5 RP11-45P15 fin GS 52927 99.745 22 yellow >0 gap of 25bp or more, not simple sequence
AL138976.5 RP11-45P15 fin GS AL133367.4 RP11-600F24 fin GS 194 100 0 green  
AL133367.4 RP11-600F24 fin GS AL139300.6 RP11-894P9 fin GS 46484 99.828 19 green simple sequence in gap
AL139300.6 RP11-894P9 fin GS AL049840.8 RP11-73M18 fin GS 146 100 0 green  
AL049840.8 RP11-73M18 fin GS AL132712.4 CTD-2134A5 fin GS 29366 99.980 3 green simple sequence in gap
AL132712.4 CTD-2134A5 fin GS AL136001.6 RP11-865F7 fin GS 12467 99.824 4 green simple sequence in gap
AL136001.6 RP11-865F7 fin GS AL359399.3 CTD-2223O18 fin GS 55059 99.840 14 yellow >0 gap of 25bp or more, not simple sequence
AL359399.3 CTD-2223O18 fin GS AL590079.3 CTD-2502D3 fin GS 34175 99.886 13 yellow half-dovetail of >0bp and <=50bp
AL590079.3 CTD-2502D3 fin GS AL512790.1 CTD-2249J5 fin GS 5909 100 0 green  
AL512790.1 CTD-2249J5 fin GS AL512357.4 RP11-260M19 fin GS 1573 99.936 0 yellow alignment length < 2000
AL512357.4 RP11-260M19 fin GS BX927359.1 RP11-614O9 fin GS 82 100 0 green  
BX927359.1 RP11-614O9 fin GS AL583722.6 RP11-982M15 fin GS 29830 99.970 0 green  
AL583722.6 RP11-982M15 fin GS AL590327.3 CTD-2507D9 fin GS 34054 99.833 12 yellow half-dovetail of >0bp and <=50bp; >0 gap of 25bp or more, not simple sequence
AL590327.3 CTD-2507D9 fin GS AL590326.3 RP11-477I4 fin GS 11226 99.768 5 green simple sequence in gap
AL590326.3 RP11-477I4 fin GS AL583810.5 CTD-3051D23 fin GS 8016 99.825 4 green simple sequence in gap
AL583810.5 CTD-3051D23 fin GS AL512802.2 CTD-2319J18 fin GS 11598 99.793 1 green simple sequence in gap
AL512802.2 CTD-2319J18 fin GS AL512356.6 RP11-44N21 fin GS 1296 100 0 green  
AL512356.6 RP11-44N21 fin GS AL512355.6 RP11-1087P8 fin GS 33163 99.970 7 green simple sequence in gap
AL512355.6 RP11-1087P8 fin GS AL928654.1 RP11-521B24 fin GS 17251 99.994 0 green  
AL928654.1 RP11-521B24 fin GS AL928742.3 RP11-731F5 fin GS 51626 99.992 3 green simple sequence in gap
AL928742.3 RP11-731F5 fin GS AL928761.2 ? fin GS 2149 99.767 0 green  
AL928761.2 ? fin GS AL928769.1 ? fin GS 677 100 0 yellow half-dovetail of >0bp and <=50bp
AL928769.1 ? fin GS AL928765.1 ? fin GS 1500 99.933 3 yellow half-dovetail of >0bp and <=50bp
AL928765.1 ? fin GS AL928767.1 ? fin GS 195 100 0 yellow half-dovetail of >0bp and <=50bp
AL928767.1 ? fin GS AL928762.2 ? fin GS 808 99.876 1 red >0 gap of 50bp or more, not simple sequence
AL928762.2 ? fin GS AL928768.1 XX-JAP2 fin GS 675 99.111 1 yellow identity < 99.6%
AL928768.1 XX-JAP2 fin GS AL901608.1 CTD-2194O15 fin GS 3336 99.850 0 green  
AL901608.1 CTD-2194O15 fin GS AL122127.6 RP11-417P24 fin GS 13161 99.871 6 green simple sequence in gap
AL122127.6 RP11-417P24 fin GS AB019441.1 ? unk 33651 99.768 8 yellow >0 gap of 25bp or more, not simple sequence
AB019441.1 ? unk AB019440.1 ? unk 0 N/A 0 purple approved certificate; no overlap present
AB019440.1 ? unk AB019439.1 ? unk 0 N/A 0 purple approved certificate; no overlap present
AB019439.1 ? unk AB019438.1 ? unk 0 N/A 0 purple approved certificate; no overlap present
AB019438.1 ? unk AB019437.1 ? unk 0 N/A 0 purple approved certificate; no overlap present