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Current tiling path for human chromosome Y

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TPF revision information

Last updated:
July 30, 2014 at 2:39 PM Eastern Time
By:
WUGSC(dalbrach)
Version:
29

Patches and alternate loci

  • Purple cell with +P icon: patch component
  • Orange cell with +A icon: alt loci component

Join legend

  • Red circleSerious alignment problem, requires review
  • Yellow circleMinor alignment problem
  • Green circleExcellent alignment, meets all defined criteria
  • Black circleCertificate submitted, not yet approved
  • Purple circleCertificate submitted and approved
  • Grey circleValid, contained clone
  • White circleJoin not evaluated due to one accession not being finished
Current tiling path for human chromosome Y (v. 29):
Accession Name Contig Center Status Join Align length Gaps Percent identical Comments
GAP TELOMERE 10000
   GAP PAR BX640545 AC006209
AC006040.3 RP11-400O10 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC074181.1 RP11-515L2 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC006157.2 RP11-414C23 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC006032.2 RP11-115E20 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC006152.4 RP11-4N7 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC011305.2 RP11-390E9 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC009479.4 RP11-278L6 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC019058.4 RP11-125B15 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC024038.6 RP11-349O6 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC012078.3 RP11-539O22 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010094.5 RP11-336O5 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010737.4 RP11-439L24 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010084.3 RP11-145J12 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010905.3 RP11-560B8 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010106.2 RP11-575J5 HSCHRY_CTG7 WUGSC fin joinyellow 200 0 100 alignment length < 2000
AC024703.5 RP11-51N20 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC012077.4 RP11-524G14 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010142.4 RP11-240N18 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC019060.5 RP11-125K5 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC023423.5 RP11-430C23 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010722.2 RP11-122L9 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010685.3 RP11-465A8 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010129.3 RP11-59N9 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC012067.2 RP11-192N14 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC012667.2 RP11-357C22 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010081.4 RP11-65E7 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010874.3 RP11-118K2 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010977.4 RP11-362J16 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC016681.2 RP11-62H15 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010140.3 RP11-218E11 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC006335.2 RP11-492C2 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010154.3 RP11-573O23 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010144.4 RP11-309M4 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010728.4 RP11-258E22 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC013412.3 RP11-507A3 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC011297.3 RP11-115H13 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC012068.5 RP11-196J6 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010104.3 RP11-540C18 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010143.3 RP11-301O17 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC007284.4 RP11-558K21 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC007247.5 RP11-305H21 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC007274.3 RP11-105L10 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC007275.4 RP11-109F19 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010678.4 RP11-108F14 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC010902.4 RP11-549J7 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC016749.4 RP11-504E20 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC051663.9 RP11-475P15 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC025731.12 RP11-48H21 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC016991.5 RP11-17E15 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC064829.6 RP11-375P13 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC009491.3 RP11-418M8 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC007967.3 RP11-373F14 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC068719.3 RP11-403P11 HSCHRY_CTG7 WUGSC fin joingreen 200 0 100
AC079126.3 CTB-45E23 HSCHRY_CTG7 WUGSC fin
   GAP TYPE-2 8260 PAIRED ENDS
ABBA01060289.1 ? HSCHRY_CTG7 None wgs
GAP TYPE-3
ABBA01031656.1 ? HSCHRY_CTG8 None wgs
   GAP TYPE-2 847 PAIRED ENDS
ABBA01031655.1 ? HSCHRY_CTG8 None wgs
   GAP TYPE-2 2052 PAIRED ENDS
   ABBA01031654.1 ? HSCHRY_CTG8 MINUS wgs
   AC079125.4 RP11-1188O8 HSCHRY_CTG8 CONTAINED_TURNOUT in ABBA01031654.1 fin joingray 5,572 0 100 contained sequence
AC009952.4 RP11-175I4 HSCHRY_CTG8 WUGSC fin joingreen 200 0 100
AC025732.9 RP11-116J19 HSCHRY_CTG8 WUGSC fin joingreen 200 0 100
AC006158.6 RP11-441G8 HSCHRY_CTG8 WUGSC fin
GAP TYPE-3
AC006156.5 RP11-344D2 HSCHRY_CTG9 WUGSC fin joingreen 200 0 100
AC025819.7 RP11-370N2 HSCHRY_CTG9 WUGSC fin joingreen 200 0 100
AC017019.3 RP11-182H20 HSCHRY_CTG9 WUGSC fin joingreen 200 0 100
AC010891.2 RP11-453C1 HSCHRY_CTG9 WUGSC fin joingreen 200 0 100
AC006986.3 RP11-155J5 HSCHRY_CTG9 WUGSC fin joingreen 200 0 100
AC006987.2 RP11-160K17 HSCHRY_CTG9 WUGSC fin joingreen 200 0 100
AC010970.3 RP11-108I14 HSCHRY_CTG9 WUGSC fin
GAP TYPE-3
GAP CENTROMERE_DATA_START
GJ212193.1 ? CENY_1 None wgs
GAP CENTROMERE_DATA_END
GAP TYPE-3
AC069323.5 RP11-1126J10 HSCHRY_CTG10 WUGSC fin
   GAP TYPE-2 12393 ALIGN GENUS
   AUXG01000678.1 ? HSCHRY_CTG10 MINUS wgs
   GAP TYPE-2 1432 PAIRED ENDS
   AUXG01000677.1 ? HSCHRY_CTG10 MINUS wgs
   GAP TYPE-2 995 PAIRED ENDS
   AUXG01000676.1 ? HSCHRY_CTG10 MINUS wgs
   GAP TYPE-2 2486 PAIRED ENDS
   AUXG01000675.1 ? HSCHRY_CTG10 MINUS wgs
   GAP TYPE-2 2727 PAIRED ENDS
   AUXG01000674.1 ? HSCHRY_CTG10 MINUS wgs
   GAP TYPE-2 329 PAIRED ENDS
   AUXG01000673.1 ? HSCHRY_CTG10 MINUS wgs
GAP TYPE-3
AUXG01000408.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 25 PAIRED ENDS
AUXG01000409.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 808 PAIRED ENDS
AUXG01000410.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 534 PAIRED ENDS
AUXG01000411.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 2235 PAIRED ENDS
AUXG01000412.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 679 PAIRED ENDS
AUXG01000413.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 1523 PAIRED ENDS
AUXG01000414.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 1659 PAIRED ENDS
AUXG01000415.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 582 PAIRED ENDS
AUXG01000416.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 1078 PAIRED ENDS
AUXG01000417.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 899 PAIRED ENDS
AUXG01000418.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 908 PAIRED ENDS
AUXG01000419.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 1590 PAIRED ENDS
AUXG01000420.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 628 PAIRED ENDS
AUXG01000421.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 25 PAIRED ENDS
AUXG01000422.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 783 PAIRED ENDS
AUXG01000423.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 518 PAIRED ENDS
AUXG01000424.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 255 PAIRED ENDS
AUXG01000425.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 892 PAIRED ENDS
AUXG01000426.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 818 PAIRED ENDS
AUXG01000427.1 ? HSCHRY_CTG10_1 None wgs
   GAP TYPE-2 780 PAIRED ENDS
AUXG01000428.1 ? HSCHRY_CTG10_1 None wgs joinyellow 394 0 100 half-dovetail of >0bp and <=50bp; alignment length < 2000
AC140113.3 RP1-85D24 HSCHRY_CTG10_1 WUGSC fin joingreen 71,055 10 99.980 simple sequence in gap
AC134878.3 RP11-131M6 HSCHRY_CTG10_1 WUGSC fin joingreen 33,248 0 100
AC134882.2 RP11-886I11 HSCHRY_CTG10_1 WUGSC fin joingreen 10,705 0 100
AC134879.3 RP11-295P22 HSCHRY_CTG10_1 WUGSC fin
GAP TYPE-3
   ABBA01065757.1 ? HSCHRY_CTG10_2 MINUS wgs
   GAP TYPE-2 267 PAIRED ENDS
   ABBA01065756.1 ? HSCHRY_CTG10_2 MINUS wgs
   GAP TYPE-2 38 PAIRED ENDS
ABBA01065755.1 ? HSCHRY_CTG10_2 None wgs
   GAP TYPE-2 1807 PAIRED ENDS
   ABBA01065754.1 ? HSCHRY_CTG10_2 MINUS wgs
   GAP TYPE-2 20 PAIRED ENDS
ABBA01065753.1 ? HSCHRY_CTG10_2 None wgs
   GAP TYPE-2 140 PAIRED ENDS
   ABBA01065752.1 ? HSCHRY_CTG10_2 MINUS wgs
   GAP TYPE-2 20 PAIRED ENDS
ABBA01065751.1 ? HSCHRY_CTG10_2 None wgs
   GAP TYPE-2 328 PAIRED ENDS
ABBA01065750.1 ? HSCHRY_CTG10_2 None wgs
   AC011293.5 RP11-75F5 HSCHRY_CTG10_2 CONTAINED_TURNOUT in ABBA01065750.1 fin joinyellow 786 0 100 alignment length < 2000
AC012502.3 RP11-461H6 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC011302.3 RP11-333E9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC013735.5 RP11-558M10 HSCHRY_CTG10_2 WUGSC fin joingreen 10,037 0 100
AC245171.2 RP11-206P20 HSCHRY_CTG10_2 WUGSC fin joingreen 143,230 6 100
AC253973.3 RP11-91N9 HSCHRY_CTG10_2 WUGSC fin joingreen 15,798 0 100
AC245170.2 RP11-241D3 HSCHRY_CTG10_2 WUGSC fin joingreen 44,155 34 99.918
AC244504.2 RP11-350I10 HSCHRY_CTG10_2 WUGSC fin joinyellow 1,186 0 100 alignment length < 2000
AC244213.3 RP11-125B2 HSCHRY_CTG10_2 WUGSC fin joingreen 22,089 0 100
AC244434.2 RP11-460B21 HSCHRY_CTG10_2 WUGSC fin joingreen 31,894 0 99.997
AC244170.3 RP11-113K10 HSCHRY_CTG10_2 WUGSC fin joingreen 50,028 0 100
AC244214.2 RP11-482C14 HSCHRY_CTG10_2 WUGSC fin joingreen 48,339 1 100
AC010877.3 RP11-218F6 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006376.2 RP11-386L3 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007004.3 RP11-521D3 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006383.2 RP11-498H20 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006371.2 RP11-304C24 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006370.2 RP11-292P9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC018677.3 RP11-264A13 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010720.4 RP11-53K10 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010723.3 RP11-139C10 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC019191.4 RP11-312H22 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010726.4 RP11-224C16 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010979.3 RP11-384N21 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010879.2 RP11-235I1 HSCHRY_CTG10_2 WUGSC fin joingreen 2,000 0 100
AC011903.4 RP11-568F18 HSCHRY_CTG10_2 WUGSC fin joingreen 2,000 0 100
AC017032.3 RP11-292E8 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006989.3 RP11-225B4 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC011289.4 RP11-59K8 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010972.3 RP11-133D3 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007007.3 RP11-551F5 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006998.3 RP11-458M9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006382.3 RP11-494J4 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006462.3 RP11-389B19 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006336.4 RP11-508K5 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC016671.3 RP11-12J24 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC017020.4 RP11-185K15 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC011749.2 RP11-455E3 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC053516.10 RP11-442J5 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010135.3 RP11-128D13 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010128.3 RP11-15H4 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC011751.2 RP11-478I15 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC016678.4 RP11-55O11 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC015979.4 RP11-538M13 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007034.4 RP11-99M1 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007043.3 RP11-507E21 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC006999.2 RP11-462A19 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007042.3 RP11-399H17 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC091329.3 RP11-568H21 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007972.4 RP11-537C24 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC015978.4 RP11-529I21 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC068704.4 RP11-434F12 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007742.4 RP11-357E16 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC095381.1 ? HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009976.4 RP11-509B6 HSCHRY_CTG10_2 WUGSC fin joinpurple 6 0 N/A approved certificate; no overlap present
AC095380.1 ? HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC024183.4 RP11-268K13 HSCHRY_CTG10_2 WUGSC fin joinpurple 6 0 N/A approved certificate; no overlap present
AC007241.3 RP11-157F24 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC069130.6 RP11-468D10 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC073962.5 RP11-945E12 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC068541.7 RP11-243P9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC022486.4 RP11-569J3 HSCHRY_CTG10_2 WUGSC fin joinyellow 200 0 100 alignment length < 2000
AC007379.2 RP11-143C1 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009235.4 RP11-392F24 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007244.2 RP11-207L19 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC021210.4 RP11-389F23 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010133.4 RP11-118E9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC012062.4 RP11-80E19 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010137.3 RP11-169D1 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009977.4 RP11-576C2 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010889.3 RP11-424G14 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010151.3 RP11-508P10 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009233.3 RP11-356K22 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC079157.3 RP11-1285C3 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC079261.2 RP11-1325K3 HSCHRY_CTG10_2 WUGSC fin
GAP type-2
AC079156.4 RP11-943F15 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC024250.6 RP11-684N2 HSCHRY_CTG10_2 WUGSC fin joinblack 0 0 N/A initial certificate; no overlap present
AC009240.6 RP11-489O13 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC011745.4 RP11-329C15 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007678.3 RP11-256K9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009494.2 RP11-450B24 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC026061.8 RP11-223K9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009489.3 RP11-339J4 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC007876.2 RP11-65G9 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC009239.3 RP11-470K20 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010086.4 RP11-209I11 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC010141.2 RP11-220O2 HSCHRY_CTG10_2 WUGSC fin joingreen 200 0 100
AC021107.3 RP11-178M5 HSCHRY_CTG10_2 WUGSC fin
   GAP TYPE-2 1899 PAIRED ENDS
   ABBA01049570.1 ? HSCHRY_CTG10_2 MINUS wgs
   GAP TYPE-2 508 PAIRED ENDS
ABBA01049571.1 ? HSCHRY_CTG10_2 None wgs
   GAP TYPE-2 301 PAIRED ENDS
   ABBA01049572.1 ? HSCHRY_CTG10_2 CONTAINED_TURNOUT in AUXG01000496.1 wgs joingray 5,155 1 99.981 contained sequence
AUXG01000496.1 ? HSCHRY_CTG10_2 None wgs
   GAP TYPE-3 16000 OPTICAL MAP
AC078938.3 CTC-480L15 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC024236.5 RP11-400I17 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC007322.4 RP11-553C13 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC007359.3 RP11-66M18 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC023342.3 RP11-95B23 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC025227.6 RP11-109G18 HSCHRY_CTG11 WUGSC fin joinyellow 200 0 100 alignment length < 2000
AC007320.3 RP11-477B5 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC008175.2 RP11-427G18 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC016694.2 RP11-123G1 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC010080.2 RP11-5C5 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC016911.6 RP11-473E1 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006366.4 RP11-86G22 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC010088.4 RP11-289L7 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC053490.2 RP11-140H23 HSCHRY_CTG11 WUGSC fin joinyellow 200 0 100 alignment length < 2000
AC007039.6 RP11-263A15 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006983.4 RP11-70G12 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC009947.2 RP11-39P20 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC016707.2 RP11-221K4 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC016752.2 RP11-506M9 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC025246.6 RP11-589P14 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC073649.3 RP11-823D8 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC073893.4 RP11-978G18 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC068601.8 RP11-1067I16 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC023274.2 RP11-307L15 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC012005.4 RP11-533E23 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC013465.4 RP11-424J12 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC016698.3 RP11-160O2 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC010153.3 RP11-535I13 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC025735.4 RP11-214M24 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC010089.4 RP11-290O3 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006982.3 RP11-26D12 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006338.6 RP11-539D10 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC016728.4 RP11-363G6 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006386.4 RP11-566H16 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006328.5 RP11-102O5 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC007562.4 RP11-497C14 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC010682.3 RP11-251M8 HSCHRY_CTG11 WUGSC fin joinpurple 6 0 N/A approved certificate; no overlap present
AC017005.7 RP11-100J21 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC007965.3 RP11-245K4 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC006991.3 RP11-270H4 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC024067.4 RP11-487K20 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC013734.4 RP11-557B9 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC019099.6 RP11-428D10 HSCHRY_CTG11 WUGSC fin joingreen 200 0 100
AC073880.5 RP11-1136L22 HSCHRY_CTG11 WUGSC fin
GAP HETEROCHROMATIN 30000000
   AC068123.5 RP11-242E13 HSCHRY_CTG11_1 MINUS fin
GAP TYPE-3
+P GQ222231.1 ABC8-41143400G2 HSCHRY_CTG12 None unk joingreen 2,000 0 99.900
+P GQ222230.1 LL0YNC03-8A12 HSCHRY_CTG12 None unk joingreen 2,000 0 100
+P AC025226.4 RP11-57J19 HSCHRY_CTG12 WUGSC fin
   GAP PAR AJ271735 AJ271736
GAP TELOMERE 10000