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Current tiling path for human chromosome 16

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TPF revision information

Last updated:
January 21, 2014 at 9:47 AM Eastern Time
By:
SC(gjt)
Version:
61

Patches and alternate loci

  • Purple cell with +P icon: patch component
  • Orange cell with +A icon: alt loci component

Join legend

  • Red circleSerious alignment problem, requires review
  • Yellow circleMinor alignment problem
  • Green circleExcellent alignment, meets all defined criteria
  • Black circleCertificate submitted, not yet approved
  • Purple circleCertificate submitted and approved
  • Grey circleValid, contained clone
  • White circleJoin not evaluated due to one accession not being finished
Current tiling path for human chromosome 16 (v. 61):
Accession Name Contig Center Status Join Align length Gaps Percent identical Comments
GAP TELOMERE 10000
Z84812.1 ? HSCHR16_CTG1 None unk joinyellow 442 0 100 alignment length < 2000
Z84723.1 ? HSCHR16_CTG1 None unk joinyellow 332 0 100 alignment length < 2000
Z69719.1 CNFG9 HSCHR16_CTG1 SC fin joingreen 107 0 100
   KF456133.1 ? HSCHR16_CTG1 CONTAINED in Z69719.1 unk joinyellow 105 0 99.048 identity < 99.6%; alignment length < 2000
   KF511222.1 ? HSCHR16_CTG1 CONTAINED in Z69719.1 fin joinyellow 262 1 100 alignment length < 2000
   KF511226.1 ? HSCHR16_CTG1 CONTAINED in Z69719.1 fin joinyellow 388 1 100 alignment length < 2000
Z69720.1 CRA36 HSCHR16_CTG1 SC fin joinyellow 688 0 100 alignment length < 2000
   KF510416.1 ? HSCHR16_CTG1 CONTAINED in Z69720.1 fin joinyellow 197 1 100 alignment length < 2000
   KF456130.1 ? HSCHR16_CTG1 CONTAINED in Z69720.1 unk joinyellow 91 0 98.901 identity < 99.6%; alignment length < 2000
   KF459691.1 ? HSCHR16_CTG1 CONTAINED in Z69720.1 unk joinyellow 377 1 100 alignment length < 2000
   KF456132.1 ? HSCHR16_CTG1 CONTAINED in Z69720.1 unk joinyellow 367 0 99.728 alignment length < 2000
Z84722.1 ? HSCHR16_CTG1 None unk joinyellow 194 0 100 alignment length < 2000
   KF510417.1 ? HSCHR16_CTG1 CONTAINED in Z84722.1 fin joinyellow 342 1 100 alignment length < 2000
Z84813.1 ? HSCHR16_CTG1 None unk joinyellow 200 0 100 alignment length < 2000
Z69666.1 24F8 HSCHR16_CTG1 SC fin joinyellow 307 0 100 alignment length < 2000
Z84721.1 ? HSCHR16_CTG1 None unk joinyellow 103 0 100 alignment length < 2000
Z69706.2 LA16c-OS12 HSCHR16_CTG1 SC fin joingreen 101 0 100
Z69890.1 CRJ14 HSCHR16_CTG1 SC fin joingreen 95 0 100
AC004754.1 ? HSCHR16_CTG1 JGI fin joingreen 10,112 1 100
Z69667.1 LA16c-314G4 HSCHR16_CTG1 SC fin joingreen 104 0 100
   KF510418.1 ? HSCHR16_CTG1 CONTAINED in Z69667.1 fin joinyellow 357 1 100 alignment length < 2000
Z99754.1 LA16c-419C1 HSCHR16_CTG1 SC fin joingreen 13,142 2 99.985
AC004652.1 ? HSCHR16_CTG1 JGI fin joingreen 10,984 0 99.991
AC005202.1 ? HSCHR16_CTG1 JGI fin joingreen 1,458 0 100
Z97634.26 LA16c-367G8 HSCHR16_CTG1 SC fin joingreen 100 0 100
+A AL023881.24 LA16c-359F1 HSCHR16_CTG1 SC fin joinyellow 100 0 99.000 identity < 99.6%
+A AL049542.10 RP1-196A12 HSCHR16_CTG1 SC fin joingreen 100 0 100
+A Z98882.4 LA16c-356B8 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z97986.3 LA16c-366D1 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z98883.5 LA16c-407A10 HSCHR16_CTG1 SC fin joingreen 104 0 100
Z98881.1 LA16c-338H10 HSCHR16_CTG1 SC fin joingreen 104 0 100
Z84479.1 LA16c-398G5 HSCHR16_CTG1 SC fin joingreen 105 0 100
   KF456138.1 ? HSCHR16_CTG1 CONTAINED in Z84479.1 unk joinyellow 348 0 99.713 alignment length < 2000
AL022341.6 LA16c-349E10 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z92544.1 LA16c-313D11 HSCHR16_CTG1 SC fin joingreen 100 0 100
   KF456137.1 ? HSCHR16_CTG1 CONTAINED in Z92544.1 unk joinyellow 383 0 99.739 alignment length < 2000
Z97653.14 LA16c-380A1 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z98258.1 LA16c-444G9 HSCHR16_CTG1 SC fin joinyellow 104 0 100 alignment length < 2000
   KF456140.1 ? HSCHR16_CTG1 CONTAINED in Z98258.1 unk joinyellow 389 0 99.743 alignment length < 2000
AL031258.12 LA16c-335H7 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031033.5 LA16c-321D2 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL023882.4 LA16c-398F6 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031008.1 LA16c-360A4 HSCHR16_CTG1 SC fin joingreen 100 0 100
   KF456139.1 ? HSCHR16_CTG1 CONTAINED in AL031008.1 unk joinyellow 355 0 99.718 alignment length < 2000
AL031716.8 LA16c-360B4 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL008727.2 LA16c-306A4 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z93041.2 LA16c-366D3 HSCHR16_CTG1 SC fin joingreen 11,457 1 99.991 simple sequence in gap
   KF456135.1 ? HSCHR16_CTG1 CONTAINED in Z93041.2 unk joinyellow 112 0 99.107 identity < 99.6%; alignment length < 2000
AC009041.10 RP11-161M6 HSCHR16_CTG1 JGI fin joingreen 13,257 0 99.925
   KF456141.2 ? HSCHR16_CTG1 CONTAINED in AC009041.10 unk joinyellow 288 0 99.653 alignment length < 2000
   KF456144.1 ? HSCHR16_CTG1 CONTAINED in AC009041.10 unk joinyellow 344 0 99.709 alignment length < 2000
   KF456143.1 ? HSCHR16_CTG1 CONTAINED in AC009041.10 unk joinyellow 312 0 99.679 alignment length < 2000
AL031713.8 LA16c-349E11 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031598.4 LA16c-381G6 HSCHR16_CTG1 SC fin joingreen 11,794 3 99.864 simple sequence in gap
   KF456145.1 ? HSCHR16_CTG1 CONTAINED in AL031598.4 unk joinyellow 365 0 99.726 alignment length < 2000
AC120498.2 RP11-616M22 HSCHR16_CTG1 JGI fin joingreen 5,455 1 99.982 simple sequence in gap
   AMYH02031223.1 ? HSCHR16_CTG1 CONTAINED in AC120498.2 wgs joinred 39,745 56 99.555 >0 gap of 50bp or more, not simple sequence
AL031714.8 LA16c-358B7 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031709.12 LA16c-316G12 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031721.1 LA16c-399E4 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL032819.32 LA16c-312E8 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL137252.2 LA16c-438F12 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031600.4 LA16c-390E6 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031705.25 LA16c-305C8 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031720.5 LA16c-385E7 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031719.12 LA16c-380F5 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z97633.2 LA16c-313F4 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL133297.1 LA16c-425C2 HSCHR16_CTG1 SC fin joingreen 100 0 100
Z97652.9 LA16c-395F10 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031708.3 LA16c-315G5 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031009.1 LA16c-431H6 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031710.11 LA16c-329F2 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL031717.11 LA16c-361A3 HSCHR16_CTG1 SC fin joingreen 2,802 0 99.857
AC012180.6 RP11-31I10 HSCHR16_CTG1 JGI fin joingreen 24,850 17 99.738 simple sequence in gap
AL031722.20 LA16c-429E7 HSCHR16_CTG1 SC fin joingreen 100 0 100
AL132823.2 LA16c-318D2 HSCHR16_CTG1 SC fin joinyellow 100 0 99.000 identity < 99.6%
AL499628.1 DJ76P10 HSCHR16_CTG1 SC fin joingreen 100 0 100
+A AL031723.56 LA16c-439A6 HSCHR16_CTG1 SC fin joingreen 35,535 4 99.972 simple sequence in gap
AC005363.1 47H2 HSCHR16_CTG1 JGI fin joingreen 32,515 2 99.969 simple sequence in gap
AC005606.3 109C8 HSCHR16_CTG1 JGI fin joingreen 2,954 1 99.966
   KF459688.1 ? HSCHR16_CTG1 CONTAINED in AC005606.3 unk joinyellow 69 0 98.551 identity < 99.6%; alignment length < 2000
AC093513.3 CTD-2517G10 HSCHR16_CTG1 JGI fin joingreen 13,448 0 99.993
AC009065.8 RP11-304L19 HSCHR16_CTG1 JGI fin joingreen 80,262 19 99.909 simple sequence in gap
AC098805.2 RP11-657D15 HSCHR16_CTG1 JGI fin joinpurple 18,773 15 99.787 approved certificate; >0 gap of 50bp or more, not simple sequence
AC106820.4 RP11-715J22 HSCHR16_CTG1 JGI fin joinyellow 68,209 25 99.913 half-dovetail of >0bp and <=50bp
AC093525.3 RP11-20I23 HSCHR16_CTG1 JGI fin joingreen 54,920 2 99.985 simple sequence in gap
AC141586.2 CTD-3126B10 HSCHR16_CTG1 JGI fin joingreen 56,785 0 99.995
AC092117.4 CTD-2270P14 HSCHR16_CTG1 JGI fin joingreen 16,504 0 99.982
AC005361.1 LA16c-352F10 HSCHR16_CTG1 JGI fin joingreen 729 0 100
AC003965.1 LA16c-325D7 HSCHR16_CTG1 JGI fin joingreen 1,176 0 100
   KF459802.1 ? HSCHR16_CTG1 CONTAINED in AC003965.1 unk joinyellow 382 0 99.738 alignment length < 2000
AC004234.1 LA16c-399H11 HSCHR16_CTG1 JGI fin joingreen 3,726 0 100
AC004034.2 LA16c-321D4 HSCHR16_CTG1 JGI fin joingreen 3,490 0 100
AC004235.1 LA16c-432A1 HSCHR16_CTG1 JGI fin joingreen 5,004 0 100
AC004233.1 LA16c-380H5 HSCHR16_CTG1 JGI fin joingreen 20,612 4 99.767 simple sequence in gap
AC108134.3 RP11-473M20 HSCHR16_CTG1 JGI fin joinyellow 127,978 49 99.887 half-dovetail of >0bp and <=50bp; >0 gap of 25bp or more, not simple sequence
AJ003147.1 ? HSCHR16_CTG1 None unk joingreen 9,203 1 99.989
   KF511228.1 ? HSCHR16_CTG1 CONTAINED in AJ003147.1 fin joinyellow 165 1 100 alignment length < 2000
   KF456146.1 ? HSCHR16_CTG1 CONTAINED in AJ003147.1 unk joinyellow 269 0 99.628 alignment length < 2000
   KF456142.1 ? HSCHR16_CTG1 CONTAINED in AJ003147.1 unk joinyellow 397 0 99.748 alignment length < 2000
   KC877584.1 ? HSCHR16_CTG1 CONTAINED in AJ003147.1 unk joinyellow 556 0 99.820 alignment length < 2000
AC004232.1 LA16c-360H6 HSCHR16_CTG1 JGI fin joingreen 7,708 2 99.948 simple sequence in gap
AC025283.6 RP11-433P17 HSCHR16_CTG1 JGI fin joingreen 2,752 1 99.855
AC004224.1 LA16c-306E5 HSCHR16_CTG1 JGI fin joingreen 11,811 0 100
AC004494.1 LA16c-390H2 HSCHR16_CTG1 JGI fin joingreen 4,250 0 100
AC006111.4 RP11-461A8 HSCHR16_CTG1 JGI fin joingreen 1,610 0 100
   FO082291.1 PCR_RP11_AC006111_1 HSCHR16_CTG1 CONTAINED in AC006111.4 unk joinyellow 578 1 100 alignment length < 2000
AC004651.1 ? HSCHR16_CTG1 JGI fin joingreen 1,828 0 100
AC004509.1 ? HSCHR16_CTG1 JGI fin joingreen 892 0 100
AC007151.2 RP11-95J11 HSCHR16_CTG1 JGI fin joinyellow 49,140 1 99.988 half-dovetail of >0bp and <=50bp
AC005736.1 RP11-462G12 HSCHR16_CTG1 JGI fin joinyellow 17,219 4 99.977 half-dovetail of >0bp and <=50bp
   KF456147.1 ? HSCHR16_CTG1 CONTAINED in AC005736.1 unk joinyellow 205 0 99.512 identity < 99.6%; alignment length < 2000
   KF456149.1 ? HSCHR16_CTG1 CONTAINED in AC005736.1 unk joinyellow 180 0 99.444 identity < 99.6%; alignment length < 2000
   KF454950.1 ? HSCHR16_CTG1 CONTAINED in AC005736.1 unk joinred 54 0 96.296 identity < 98%
   KF456154.1 ? HSCHR16_CTG1 CONTAINED in AC005736.1 unk joinyellow 389 0 99.743 alignment length < 2000
AC009171.6 RP11-95P2 HSCHR16_CTG1 JGI fin joingreen 7,793 2 99.846 simple sequence in gap
+A AC005356.1 ? HSCHR16_CTG1 JGI fin joingreen 31,034 4 99.958 simple sequence in gap
+A AC012676.5 RP11-295D4 HSCHR16_CTG1 JGI fin joingreen 20,256 1 100 simple sequence in gap
   KF456150.1 ? HSCHR16_CTG1 CONTAINED in AC012676.5 unk joinyellow 383 0 99.739 alignment length < 2000
+A AC007606.8 RP11-35P16 HSCHR16_CTG1 JGI fin joingreen 78,545 36 99.843 simple sequence in gap
AC023830.9 RP11-709D24 HSCHR16_CTG1 JGI fin joingreen 5,715 0 100
AC020663.1 RP11-127I20 HSCHR16_CTG1 JGI fin joingreen 54,038 0 99.994
   KF456151.1 ? HSCHR16_CTG1 CONTAINED in AC020663.1 unk joinyellow 390 0 99.744 alignment length < 2000
AC027687.7 RP11-61L4 HSCHR16_CTG1 JGI fin joingreen 53,733 5 99.953 simple sequence in gap
AC007011.1 RP11-165E7 HSCHR16_CTG1 JGI fin joingreen 72,519 0 100
AC026458.8 RP11-10K17 HSCHR16_CTG1 JGI fin joingreen 8,771 0 100
AC074051.4 RP11-382N13 HSCHR16_CTG1 JGI fin joingreen 13,912 2 99.842 simple sequence in gap
AC005569.1 LA16c-317H7 HSCHR16_CTG1 JGI fin joingreen 7,715 0 100
AC005364.1 LA16c-53H2 HSCHR16_CTG1 JGI fin joingreen 15,039 1 99.973 simple sequence in gap
AC005347.1 LA16c-308C6 HSCHR16_CTG1 JGI fin joingreen 9,750 0 100
AC005563.1 LA16c-324F6 HSCHR16_CTG1 JGI fin joingreen 15,080 2 99.867 simple sequence in gap
AC023822.8 RP11-124K4 HSCHR16_CTG1 JGI fin joinyellow 51,330 0 99.994 half-dovetail of >0bp and <=50bp
AC005737.1 RP11-97H22 HSCHR16_CTG1 JGI fin joinyellow 14,507 0 100 half-dovetail of >0bp and <=50bp
   KF495794.1 ? HSCHR16_CTG1 CONTAINED in AC005737.1 unk joinyellow 452 0 99.558 identity < 99.6%; alignment length < 2000
AC012175.7 RP11-19H6 HSCHR16_CTG1 JGI fin joingreen 23,758 0 100
AC009135.12 RP11-509E10 HSCHR16_CTG1 JGI fin joingreen 94,868 2 100 simple sequence in gap
AC023829.6 RP11-578P21 HSCHR16_CTG1 JGI fin joingreen 5,490 5 99.836 simple sequence in gap
AC007217.5 RP11-167B4 HSCHR16_CTG1 JGI fin joingreen 20,676 7 99.850 simple sequence in gap
AC006112.4 RP11-472H7 HSCHR16_CTG1 JGI fin joingreen 52,975 18 99.762 simple sequence in gap
AC007223.5 RP11-468I15 HSCHR16_CTG1 JGI fin joingreen 28,802 0 100
AC007012.1 RP11-185J20 HSCHR16_CTG1 JGI fin joinyellow 40,454 22 99.597 identity < 99.6%
AC125796.2 RP11-420N3 HSCHR16_CTG1 JGI fin joingreen 58,771 0 100
AC131390.3 RP11-349E19 HSCHR16_CTG1 JGI fin joingreen 39,795 1 99.997 simple sequence in gap
AC022206.3 RP11-545E8 HSCHR16_CTG1 WUGSC fin joingreen 4,082 1 99.755
AC079410.3 CTC-775M10 HSCHR16_CTG1 JGI fin joingreen 40,355 14 99.760 simple sequence in gap
AC007222.5 RP11-441K8 HSCHR16_CTG1 JGI fin joinyellow 1,084 1 99.539 identity < 99.6%
AC006075.1 RP11-192K18 HSCHR16_CTG1 JGI fin joingreen 102,838 30 99.848 simple sequence in gap
   KF510420.1 ? HSCHR16_CTG1 CONTAINED in AC006075.1 fin joinyellow 390 1 100 alignment length < 2000
AC027683.6 CTD-2357P14 HSCHR16_CTG1 JGI fin joinyellow 3,693 0 99.892 half-dovetail of >0bp and <=50bp
   KF456148.1 ? HSCHR16_CTG1 CONTAINED in AC027683.6 unk joinyellow 156 0 99.359 identity < 99.6%; alignment length < 2000
AC005774.1 RP11-26O3 HSCHR16_CTG1 JGI fin joinyellow 54,965 0 99.996 half-dovetail of >0bp and <=50bp
   KF456153.1 ? HSCHR16_CTG1 CONTAINED in AC005774.1 unk joinyellow 225 0 99.556 identity < 99.6%; alignment length < 2000
   KF456152.1 ? HSCHR16_CTG1 CONTAINED in AC005774.1 unk joinyellow 388 0 99.742 alignment length < 2000
AC093522.4 RP11-172I18 HSCHR16_CTG1 JGI fin joingreen 407 0 100
AC133001.1 RP11-498M24 HSCHR16_CTG1 JGI fin joingreen 356 0 100
AC093515.4 CTD-2535I10 HSCHR16_CTG1 JGI fin joingreen 14,346 4 99.840 simple sequence in gap
   KF456155.1 ? HSCHR16_CTG1 CONTAINED in AC093515.4 unk joinyellow 262 0 99.618 alignment length < 2000
   KC877581.1 ? HSCHR16_CTG1 CONTAINED in AC093515.4 unk joinyellow 546 0 99.817 alignment length < 2000
AC018768.7 RP11-564M2 HSCHR16_CTG1 JGI fin joingreen 33,797 0 100
AC018767.3 RP11-279O17 HSCHR16_CTG1 JGI fin joingreen 70,197 20 99.848 simple sequence in gap
AC018769.2 RP11-568A19 HSCHR16_CTG1 JGI fin joingreen 77,290 42 99.708 simple sequence in gap
AC074052.6 RP11-483K5 HSCHR16_CTG1 JGI fin joingreen 30,124 1 99.930 simple sequence in gap
   AC137777.3 LA16c-500E3 HSCHR16_CTG1 CONTAINED_TURNOUT in AUXG01000150.1 fin joinred 17,403 31 99.695 >0 gap of 500bp or more
   AC140531.3 80800823G9 HSCHR16_CTG1 CONTAINED_TURNOUT in AUXG01000150.1 fin joinred 13,260 10 99.879 >0 gap of 50bp or more, not simple sequence
   FO181539.6 ABC12-49055600O16 HSCHR16_CTG1 CONTAINED_TURNOUT in AUXG01000150.1 fin joingray 5,737 2 99.878 contained sequence
AUXG01000150.1 ? HSCHR16_CTG1 None wgs
   FP565343.3 ABC12-47014700E17 HSCHR16_CTG1 CONTAINED_TURNOUT in AUXG01000150.1 fin joingray 3,252 1 99.908 contained sequence
   AC138420.2 LA16c-429C4 HSCHR16_CTG1 CONTAINED_TURNOUT in AUXG01000150.1 fin joingreen 24,979 15 99.792
   KF456156.1 ? HSCHR16_CTG1 CONTAINED in AC138420.2 unk joinyellow 372 0 99.731 alignment length < 2000
   KF456158.1 ? HSCHR16_CTG1 CONTAINED in AC138420.2 unk joinyellow 393 0 99.746 alignment length < 2000
   KF456157.1 ? HSCHR16_CTG1 CONTAINED in AC138420.2 unk joinyellow 244 0 99.590 identity < 99.6%; alignment length < 2000
AC007224.5 RP11-475D10 HSCHR16_CTG1 JGI fin joingreen 5,947 2 99.664 simple sequence in gap
AC012173.9 RP11-152P23 HSCHR16_CTG1 JGI fin joingreen 4,605 2 99.783 simple sequence in gap
AC022167.7 RP11-77H9 HSCHR16_CTG1 JGI fin joingreen 12,453 10 99.783 simple sequence in gap
AC087190.5 RP11-473I1 HSCHR16_CTG1 JGI fin joingreen 15,265 7 99.817 simple sequence in gap
AC092122.5 RP11-102F12 HSCHR16_CTG1 JGI fin joingreen 34,678 12 99.715 simple sequence in gap
AC012178.5 RP11-243A14 HSCHR16_CTG1 JGI fin joingreen 24,771 4 99.887 simple sequence in gap
AC007221.2 RP11-418I22 HSCHR16_CTG1 JGI fin joingreen 27,919 12 99.789 simple sequence in gap
AC007218.6 RP11-297M9 HSCHR16_CTG1 JGI fin joingreen 72,183 3 99.997 simple sequence in gap
AC006531.1 RP11-113K5 HSCHR16_CTG1 JGI fin joingreen 9,176 2 100 simple sequence in gap
   KF456168.1 ? HSCHR16_CTG1 CONTAINED in AC006531.1 unk joinyellow 66 0 98.485 identity < 99.6%; alignment length < 2000
AC026423.9 CTD-2169M19 HSCHR16_CTG1 JGI fin joingreen 18,596 7 99.780 simple sequence in gap
AC133565.5 RP11-895K13 HSCHR16_CTG1 JGI fin joingreen 20,961 0 100
AC022168.6 RP11-89D3 HSCHR16_CTG1 JGI fin joingreen 11,184 5 99.821 simple sequence in gap
   KF456165.1 ? HSCHR16_CTG1 CONTAINED in AC022168.6 unk joinyellow 379 0 99.736 alignment length < 2000
AC131649.2 RP11-609N14 HSCHR16_CTG1 JGI fin joingreen 74,866 10 99.995 simple sequence in gap
   KF456162.1 ? HSCHR16_CTG1 CONTAINED in AC131649.2 unk joinyellow 391 0 99.744 alignment length < 2000
AC027277.5 RP11-27M24 HSCHR16_CTG1 JGI fin joingreen 8,675 1 100
AC007595.9 RP11-109M19 HSCHR16_CTG1 JGI fin joinpurple 50,598 19 99.858 approved certificate; >0 gap of 50bp or more, not simple sequence
AC074136.4 CTD-2318B16 HSCHR16_CTG1 JGI fin joingreen 8,005 1 99.825 simple sequence in gap
   KC877580.1 ? HSCHR16_CTG1 CONTAINED in AC074136.4 unk joinyellow 405 0 99.753 alignment length < 2000
AC133065.3 RP11-876N24 HSCHR16_CTG1 JGI fin joingreen 19,634 8 99.903 simple sequence in gap
   KF459560.1 ? HSCHR16_CTG1 CONTAINED in AC133065.3 unk joinyellow 391 0 99.744 alignment length < 2000
AC007014.1 RP11-66H6 HSCHR16_CTG1 JGI fin joingreen 23,242 0 100
AC007220.4 RP11-396B14 HSCHR16_CTG1 JGI fin joingreen 26,910 16 99.840 simple sequence in gap
AC009121.8 RP11-485G7 HSCHR16_CTG1 JGI fin joingreen 3,648 1 99.726 simple sequence in gap
   KF459690.1 ? HSCHR16_CTG1 CONTAINED in AC009121.8 unk joinyellow 192 0 99.479 identity < 99.6%; alignment length < 2000
AC099489.2 CTD-3088G3 HSCHR16_CTG1 JGI fin joingreen 34,214 8 99.947 simple sequence in gap
   KF573656.1 ? HSCHR16_CTG1 CONTAINED in AC099489.2 unk joinyellow 385 1 100 alignment length < 2000
   KF456160.1 ? HSCHR16_CTG1 CONTAINED in AC099489.2 unk joinyellow 261 0 99.617 alignment length < 2000
AC007616.5 RP11-547D14 HSCHR16_CTG1 JGI fin joingreen 29,297 0 99.997
   KF456159.1 ? HSCHR16_CTG1 CONTAINED in AC007616.5 unk joinyellow 372 0 99.731 alignment length < 2000
AC007613.8 RP11-490O6 HSCHR16_CTG1 JGI fin joingreen 68,863 2 100 simple sequence in gap
AC010654.8 RP11-486I11 HSCHR16_CTG1 JGI fin joingreen 19,637 10 99.842 simple sequence in gap
   KF510415.1 ? HSCHR16_CTG1 CONTAINED in AC010654.8 fin joinyellow 214 1 100 alignment length < 2000
AC007216.2 RP11-166B2 HSCHR16_CTG1 JGI fin joingreen 14,857 1 99.973 simple sequence in gap
AC007601.7 RP11-276H1 HSCHR16_CTG1 JGI fin joingreen 16,949 3 99.853 simple sequence in gap
   KF456161.1 ? HSCHR16_CTG1 CONTAINED in AC007601.7 unk joinyellow 392 0 99.745 alignment length < 2000
AC092365.3 RP11-450B4 HSCHR16_CTG1 JGI fin joingreen 3,715 1 99.839
AC007598.7 RP11-165M1 HSCHR16_CTG1 JGI fin joingreen 7,939 1 100 simple sequence in gap
AC131391.2 RP11-552C15 HSCHR16_CTG1 JGI fin joinyellow 6,465 5 99.304 identity < 99.6%
AC010333.7 CTD-3037G24 HSCHR16_CTG1 JGI fin joingreen 32,318 0 100
AC109597.3 CTD-2583P5 HSCHR16_CTG1 JGI fin joingreen 66,017 17 99.967 simple sequence in gap
   KC877576.1 ? HSCHR16_CTG1 CONTAINED in AC109597.3 unk joinyellow 563 0 99.822 alignment length < 2000
   KC877579.1 ? HSCHR16_CTG1 CONTAINED in AC109597.3 unk joinyellow 414 0 99.758 alignment length < 2000
AC092324.3 RP11-14K2 HSCHR16_CTG1 JGI fin joingreen 14,930 5 99.859 simple sequence in gap
AC092380.4 RP11-727M7 HSCHR16_CTG1 JGI fin joingreen 36,521 19 99.871 simple sequence in gap
AC009134.6 ? HSCHR16_CTG1 JGI fin joingreen 13,494 1 99.993 simple sequence in gap
AC003119.1 ? HSCHR16_CTG1 TIGR fin joingreen 11,931 7 99.874 simple sequence in gap
AC003009.1 ? HSCHR16_CTG1 TIGR fin joingreen 10,465 0 99.971
   KF456164.1 ? HSCHR16_CTG1 CONTAINED in AC003009.1 unk joinyellow 358 0 99.721 alignment length < 2000
U91319.1 ? HSCHR16_CTG1 TIGR fin joingreen 200 0 100
AF001551.3 ? HSCHR16_CTG1 TIGR fin joingreen 4,784 2 99.958 simple sequence in gap
AC133560.5 RP11-58I6 HSCHR16_CTG1 JGI fin joingreen 20,113 11 99.707 simple sequence in gap
U95741.1 ? HSCHR16_CTG1 TIGR fin joingreen 53,337 8 99.910 simple sequence in gap
U95743.1 ? HSCHR16_CTG1 TIGR fin joinpurple 41,657 29 99.808 approved certificate; >0 gap of 50bp or more, not simple sequence
AC009173.9 RP11-99H5 HSCHR16_CTG1 JGI fin joinyellow 65,388 6 99.937 half-dovetail of >0bp and <=50bp
AC010401.7 CTD-2135D7 HSCHR16_CTG1 JGI fin joingreen 30,772 12 99.792 simple sequence in gap
AC130650.2 CTA-276F8 HSCHR16_CTG1 JGI fin joingreen 30,230 4 99.947 simple sequence in gap
AC012626.10 CTD-2118O12 HSCHR16_CTG1 JGI fin joinyellow 104,872 54 99.883 >0 gap of 25bp or more, not simple sequence
AC040173.5 RP11-65J21 HSCHR16_CTG1 JGI fin joingreen 20,607 2 99.990 simple sequence in gap
+A AC092291.3 CTD-2502C11 HSCHR16_CTG1 JGI fin joingreen 72,885 7 99.992 simple sequence in gap
   +A KF456163.1 ? HSCHR16_CTG1 CONTAINED in AC092291.3 unk joinyellow 386 0 99.741 alignment length < 2000
AC009167.9 RP11-82O18 HSCHR16_CTG1 JGI fin joingreen 10,527 2 99.991 simple sequence in gap
AC136443.3 RP11-719K4 HSCHR16_CTG1 JGI fin joingreen 46,311 0 100
AC138932.4 RP11-680G24 HSCHR16_CTG1 JGI fin joingreen 28,324 0 100
AC139256.5 RP11-1186N24 HSCHR16_CTG1 JGI fin joingreen 2,918 0 100
AC126763.4 RP11-1390J18 HSCHR16_CTG1 JGI fin joingreen 86,699 2 100 simple sequence in gap
AC137803.2 RP11-72I8 HSCHR16_CTG1 JGI fin joingreen 100,900 1 100 simple sequence in gap
AC140504.2 RP11-1021N1 HSCHR16_CTG1 JGI fin joingreen 11,391 3 99.947 simple sequence in gap
AC026401.7 CTB-193M12 HSCHR16_CTG1 JGI fin joingreen 21,757 0 99.982
   KC877586.1 ? HSCHR16_CTG1 CONTAINED in AC026401.7 unk joinyellow 348 0 99.713 alignment length < 2000
   KC877585.1 ? HSCHR16_CTG1 CONTAINED in AC026401.7 unk joinyellow 516 0 99.806 alignment length < 2000
AF001548.1 ? HSCHR16_CTG1 TIGR fin joingreen 15,056 7 99.847 simple sequence in gap
AC024120.5 CTA-1000C7 HSCHR16_CTG1 JGI fin joinyellow 44,056 18 99.923 >0 gap of 25bp or more, not simple sequence
AC130651.2 CTA-972D3 HSCHR16_CTG1 JGI fin joingreen 18,371 9 99.858 simple sequence in gap
AC025778.8 CTD-2504F3 HSCHR16_CTG1 JGI fin joinpurple 99,004 47 99.888 approved certificate; >0 gap of 50bp or more, not simple sequence
   KC877577.1 ? HSCHR16_CTG1 CONTAINED in AC025778.8 unk joinyellow 527 0 99.810 alignment length < 2000
AC136624.3 RP11-517A5 HSCHR16_CTG1 JGI fin joingreen 130,609 0 100
AC138969.2 RP11-958N24 HSCHR16_CTG1 JGI fin joingreen 3,258 2 99.969 simple sequence in gap
AC136619.3 RP11-467M13 HSCHR16_CTG1 JGI fin joingreen 69,746 0 99.999
AC136431.3 RP11-148M17 HSCHR16_CTG1 JGI fin joingreen 19,825 13 99.939 simple sequence in gap
AC092326.4 RP11-14N9 HSCHR16_CTG1 JGI fin joingreen 111,531 16 99.972 simple sequence in gap
AC093526.5 RP11-213K2 HSCHR16_CTG1 JGI fin joingreen 23,091 14 99.835 simple sequence in gap
+A AC098965.2 RP11-419L9 HSCHR16_CTG1 JGI fin joingreen 18,615 0 99.984
AC109446.2 CTD-2576D5 HSCHR16_CTG1 JGI fin joingreen 843 0 100
   KC877590.1 ? HSCHR16_CTG1 CONTAINED in AC109446.2 unk joinyellow 562 0 99.822 alignment length < 2000
   KC877593.1 ? HSCHR16_CTG1 CONTAINED in AC109446.2 unk joinyellow 559 0 99.821 alignment length < 2000
   KC877595.1 ? HSCHR16_CTG1 CONTAINED in AC109446.2 unk joinyellow 233 0 99.571 identity < 99.6%; alignment length < 2000
AC099494.3 RP11-1102P22 HSCHR16_CTG1 JGI fin joingreen 8,568 0 100
AC009152.8 RP11-567P19 HSCHR16_CTG1 JGI fin joingreen 7,932 4 99.899 simple sequence in gap
AC109495.4 RP11-916L7 HSCHR16_CTG1 JGI fin joingreen 38,415 13 99.794 simple sequence in gap
AC106783.3 RP11-347K10 HSCHR16_CTG1 JGI fin joinpurple 78,347 9 99.971 approved certificate; >0 gap of 50bp or more, not simple sequence
AC025277.10 CTD-3229J4 HSCHR16_CTG1 JGI fin joingreen 10,362 2 99.990 simple sequence in gap
AC004097.1 ? HSCHR16_CTG1 TIGR fin joingreen 11,799 0 99.992
   KF456167.1 ? HSCHR16_CTG1 CONTAINED in AC004097.1 unk joinyellow 277 0 99.639 alignment length < 2000
AC010601.6 CTA-481E9 HSCHR16_CTG1 JGI fin joingreen 18,895 4 99.899 simple sequence in gap
AC131384.1 RP11-465L11 HSCHR16_CTG1 JGI fin joingreen 56,161 0 100
AC091489.4 RP11-164A6 HSCHR16_CTG1 JGI fin joinyellow 78,794 19 99.853 half-dovetail of >0bp and <=50bp
AC008785.7 CTD-2036A2 HSCHR16_CTG1 JGI fin joinpurple 78,509 56 99.636 approved certificate; >0 gap of 50bp or more, not simple sequence
AC126755.3 RP11-1212A22 HSCHR16_CTG1 JGI fin
GAP type-3
AC136618.3 RP11-457I16 HSCHR16_CTG1_1 JGI fin joingreen 34,538 9 99.983 simple sequence in gap
AC138811.3 RP11-1035H13 HSCHR16_CTG1_1 JGI fin joingreen 151,276 1 99.999 simple sequence in gap
AC026472.8 RP11-511J24 HSCHR16_CTG1_1 JGI fin joingreen 16,248 4 99.981 simple sequence in gap
AC092287.4 CTD-2288F12 HSCHR16_CTG1_1 JGI fin joingreen 21,027 5 99.971 simple sequence in gap
   KC877594.1 ? HSCHR16_CTG1_1 CONTAINED in AC092287.4 unk joinyellow 536 0 99.813 alignment length < 2000
AC099518.3 RP11-626G11 HSCHR16_CTG1_1 JGI fin joingreen 35,456 10 99.921 simple sequence in gap
AC010494.4 CTD-2349B8 HSCHR16_CTG1_1 JGI fin joingreen 34,866 9 99.931 simple sequence in gap
AC003003.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 27,988 12 99.846 simple sequence in gap
   KF456169.1 ? HSCHR16_CTG1_1 CONTAINED in AC003003.1 unk joinyellow 385 0 99.740 alignment length < 2000
AC130456.2 CTA-363E6 HSCHR16_CTG1_1 JGI fin joinpurple 12,735 13 99.717 approved certificate; >0 gap of 50bp or more, not simple sequence
AC003108.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 140,205 19 99.946 simple sequence in gap
AC012621.8 CTD-2055J8 HSCHR16_CTG1_1 JGI fin joingreen 4,778 0 100
AC002550.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 2,098 0 100
AC027130.5 CTD-2380F24 HSCHR16_CTG1_1 JGI fin joingreen 104,062 10 99.967 simple sequence in gap
AC134300.3 CTC-496I23 HSCHR16_CTG1_1 JGI fin joingreen 30,918 2 100 simple sequence in gap
   KC877587.1 ? HSCHR16_CTG1_1 CONTAINED in AC134300.3 unk joinyellow 240 0 99.583 identity < 99.6%; alignment length < 2000
   KC877591.1 ? HSCHR16_CTG1_1 CONTAINED in AC134300.3 unk joinyellow 245 0 99.592 identity < 99.6%; alignment length < 2000
AC002990.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 5,979 0 99.916
AC021089.8 CTD-2264D9 HSCHR16_CTG1_1 JGI fin joingreen 3,993 3 99.800 simple sequence in gap
AC092132.2 RP11-204E4 HSCHR16_CTG1_1 JGI fin joingreen 45,428 15 99.839 simple sequence in gap
AC106796.3 RP11-429K17 HSCHR16_CTG1_1 JGI fin joingreen 4,837 1 99.690 simple sequence in gap
AC137056.3 CTD-2194A8 HSCHR16_CTG1_1 JGI fin joingreen 61,953 0 100
AC141053.2 CTD-3076M17 HSCHR16_CTG1_1 JGI fin joingreen 19,482 1 99.949 simple sequence in gap
AC141273.2 RP11-143N13 HSCHR16_CTG1_1 JGI fin joingreen 22,299 2 99.987 simple sequence in gap
AC020926.8 CTD-2152G12 HSCHR16_CTG1_1 JGI fin joingreen 74,137 12 99.942 simple sequence in gap
AC004381.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 2,441 0 100
   KC877592.1 ? HSCHR16_CTG1_1 CONTAINED in AC004381.1 unk joinyellow 519 0 99.807 alignment length < 2000
AC002394.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 56,733 7 99.988 simple sequence in gap
AC105410.1 CTD-2348G11 HSCHR16_CTG1_1 JGI fin joingreen 23,579 4 99.966 simple sequence in gap
   KC877597.1 ? HSCHR16_CTG1_1 CONTAINED in AC105410.1 unk joinyellow 539 0 99.814 alignment length < 2000
AC008551.5 CTC-508F8 HSCHR16_CTG1_1 JGI fin joingreen 43,718 5 99.982 simple sequence in gap
   KF511227.1 ? HSCHR16_CTG1_1 CONTAINED in AC008551.5 fin joinyellow 397 1 100 alignment length < 2000
   KF456166.1 ? HSCHR16_CTG1_1 CONTAINED in AC008551.5 unk joinyellow 311 0 99.678 alignment length < 2000
AF001550.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 14,659 3 99.973 simple sequence in gap
AC008740.7 CTD-2547E10 HSCHR16_CTG1_1 JGI fin joingreen 15,260 8 99.902 simple sequence in gap
   KF459689.1 ? HSCHR16_CTG1_1 CONTAINED in AC008740.7 unk joinyellow 72 0 98.611 identity < 99.6%; alignment length < 2000
AC005632.2 CTB-31N19 HSCHR16_CTG1_1 WUGSC fin joingreen 32,855 9 99.966 simple sequence in gap
AC092719.3 RP11-338J22 HSCHR16_CTG1_1 JGI fin joingreen 6,444 0 100
AC092375.4 RP11-645C24 HSCHR16_CTG1_1 JGI fin joingreen 79,519 9 99.975 simple sequence in gap
AC092119.3 CTD-2649C14 HSCHR16_CTG1_1 JGI fin joingreen 21,853 5 99.986 simple sequence in gap
   KF456177.1 ? HSCHR16_CTG1_1 CONTAINED in AC092119.3 unk joinyellow 393 0 99.746 alignment length < 2000
   KC877596.1 ? HSCHR16_CTG1_1 CONTAINED in AC092119.3 unk joinyellow 551 0 99.819 alignment length < 2000
AC009019.10 RP11-101E7 HSCHR16_CTG1_1 JGI fin joingreen 61,385 1 100 simple sequence in gap
AC009034.10 RP11-141O15 HSCHR16_CTG1_1 JGI fin joingreen 19,843 4 99.995 simple sequence in gap
AC092338.4 RP11-21M24 HSCHR16_CTG1_1 JGI fin joingreen 6,656 0 99.970
AC106788.3 RP11-368J21 HSCHR16_CTG1_1 JGI fin joingreen 5,097 0 99.843
AC009021.8 RP11-105C19 HSCHR16_CTG1_1 JGI fin joingreen 4,891 0 99.898
AC130466.2 CTC-591M7 HSCHR16_CTG1_1 JGI fin joingreen 10,524 0 99.991
   KC877589.1 ? HSCHR16_CTG1_1 CONTAINED in AC130466.2 unk joinyellow 683 0 99.854 alignment length < 2000
AC130450.3 CTA-237H1 HSCHR16_CTG1_1 JGI fin joingreen 65,514 20 99.741 simple sequence in gap
AC127459.3 RP11-20G6 HSCHR16_CTG1_1 JGI fin joingreen 4,645 0 100
AC099482.3 CTC-391G2 HSCHR16_CTG1_1 JGI fin joingreen 14,624 0 100
AC130452.3 CTA-279B10 HSCHR16_CTG1_1 JGI fin joingreen 36,556 15 99.953 simple sequence in gap
AC008915.11 CTD-2270L9 HSCHR16_CTG1_1 JGI fin joingreen 1,091 2 99.908 simple sequence in gap
AC002400.1 ? HSCHR16_CTG1_1 TIGR fin joinyellow 46,195 24 99.814 >0 gap of 25bp or more, not simple sequence
   KF456171.1 ? HSCHR16_CTG1_1 CONTAINED in AC002400.1 unk joinyellow 308 0 99.675 alignment length < 2000
AC008870.8 CTD-2196E14 HSCHR16_CTG1_1 JGI fin joingreen 84,689 1 100 simple sequence in gap
   KC877588.1 ? HSCHR16_CTG1_1 CONTAINED in AC008870.8 unk joinyellow 550 0 99.818 alignment length < 2000
   KC877599.1 ? HSCHR16_CTG1_1 CONTAINED in AC008870.8 unk joinyellow 576 0 99.826 alignment length < 2000
   KC877598.1 ? HSCHR16_CTG1_1 CONTAINED in AC008870.8 unk joinyellow 559 0 99.821 alignment length < 2000
AC012317.7 CTD-2385L22 HSCHR16_CTG1_1 JGI fin joingreen 5,645 1 99.947
AC130454.2 CTA-345G4 HSCHR16_CTG1_1 JGI fin joingreen 80,003 16 99.938 simple sequence in gap
   KF456178.1 ? HSCHR16_CTG1_1 CONTAINED in AC130454.2 unk joinyellow 295 0 99.661 alignment length < 2000
   KC877603.1 ? HSCHR16_CTG1_1 CONTAINED in AC130454.2 unk joinyellow 270 0 99.630 alignment length < 2000
   KC877601.1 ? HSCHR16_CTG1_1 CONTAINED in AC130454.2 unk joinyellow 62 0 98.387 identity < 99.6%; alignment length < 2000
AC010268.10 CTC-484E17 HSCHR16_CTG1_1 JGI fin joingreen 20,414 5 99.931 simple sequence in gap
AC130448.2 CTA-113A6 HSCHR16_CTG1_1 JGI fin joingreen 4,464 1 100 simple sequence in gap
AC004125.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 14,741 5 99.939 simple sequence in gap
AC008938.9 CTD-2313J23 HSCHR16_CTG1_1 JGI fin joingreen 70,397 16 99.913 simple sequence in gap
   KF456170.1 ? HSCHR16_CTG1_1 CONTAINED in AC008938.9 unk joinyellow 341 0 99.707 alignment length < 2000
AC010321.8 CTD-2540M10 HSCHR16_CTG1_1 JGI fin joingreen 15,302 8 99.882 simple sequence in gap
AC002565.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 30,627 12 99.905 simple sequence in gap
AC008731.8 CTD-2515A14 HSCHR16_CTG1_1 JGI fin joingreen 5,599 0 100
   KC877600.1 ? HSCHR16_CTG1_1 CONTAINED in AC008731.8 unk joinyellow 79 0 98.734 identity < 99.6%; alignment length < 2000
AC010545.9 RP11-449H11 HSCHR16_CTG1_1 JGI fin joinpurple 86,363 56 99.826 approved certificate; >0 gap of 50bp or more, not simple sequence
AC133552.3 RP11-266L9 HSCHR16_CTG1_1 JGI fin joingreen 35,356 23 99.904 simple sequence in gap
AC008741.7 CTD-2547G23 HSCHR16_CTG1_1 JGI fin joingreen 6,966 0 100
AC130451.2 CTA-249B10 HSCHR16_CTG1_1 JGI fin joingreen 73,204 10 99.985 simple sequence in gap
AF265340.1 ? HSCHR16_CTG1_1 IMB fin joingreen 8,692 6 99.862 simple sequence in gap
   KC877602.1 ? HSCHR16_CTG1_1 CONTAINED in AF265340.1 unk joinyellow 531 0 99.812 alignment length < 2000
AC092141.4 RP11-478K1 HSCHR16_CTG1_1 JGI fin joingreen 11,505 0 100
AC093524.4 RP11-185O21 HSCHR16_CTG1_1 JGI fin joingreen 37,606 15 99.878 simple sequence in gap
AC093516.5 CTD-2537L13 HSCHR16_CTG1_1 JGI fin joingreen 63,702 0 100
AC093509.3 CTD-2337L2 HSCHR16_CTG1_1 JGI fin joingreen 21,703 0 99.995
AC093511.4 CTD-2507C6 HSCHR16_CTG1_1 JGI fin joingreen 61,481 8 99.928 simple sequence in gap
AC009158.7 RP11-67I10 HSCHR16_CTG1_1 JGI fin joingreen 5,120 6 99.629 simple sequence in gap
AC130464.3 CTA-88D1 HSCHR16_CTG1_1 JGI fin joingreen 17,502 1 99.989
   KF456173.1 ? HSCHR16_CTG1_1 CONTAINED in AC130464.3 unk joinyellow 281 0 99.644 alignment length < 2000
   KF456180.1 ? HSCHR16_CTG1_1 CONTAINED in AC130464.3 unk joinyellow 316 0 99.684 alignment length < 2000
   KF456176.1 ? HSCHR16_CTG1_1 CONTAINED in AC130464.3 unk joinyellow 285 0 99.649 alignment length < 2000
AC008756.9 CTD-3028M10 HSCHR16_CTG1_1 JGI fin joinpurple 111,583 35 99.846 approved certificate; >0 gap of 50bp or more, not simple sequence
   KF456179.1 ? HSCHR16_CTG1_1 CONTAINED in AC008756.9 unk joinyellow 385 0 99.740 alignment length < 2000
   KF456174.1 ? HSCHR16_CTG1_1 CONTAINED in AC008756.9 unk joinyellow 683 0 99.854 alignment length < 2000
AC002331.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 14,862 7 99.906 simple sequence in gap
AC009035.9 RP11-142A12 HSCHR16_CTG1_1 JGI fin joingreen 39,664 12 99.856 simple sequence in gap
AC130460.2 CTA-485G10 HSCHR16_CTG1_1 JGI fin joingreen 33,098 11 99.906 simple sequence in gap
AC084797.5 RP11-62O3 HSCHR16_CTG1_1 JGI fin joingreen 26,510 0 100
AC092725.3 RP11-673P17 HSCHR16_CTG1_1 JGI fin joingreen 61,307 0 100
AC109449.4 RP11-147I4 HSCHR16_CTG1_1 JGI fin joingreen 78,126 23 99.885 simple sequence in gap
AC106739.5 CTD-3203P2 HSCHR16_CTG1_1 JGI fin joingreen 55,933 9 99.911 simple sequence in gap
AC004525.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 35,410 14 99.958 simple sequence in gap
AC002303.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 61,875 11 99.947 simple sequence in gap
AC025275.4 CTC-502C3 HSCHR16_CTG1_1 JGI fin joingreen 21,750 0 99.995
AC002551.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 31,298 10 99.926 simple sequence in gap
   KF456172.1 ? HSCHR16_CTG1_1 CONTAINED in AC002551.1 unk joinyellow 290 0 99.655 alignment length < 2000
AC016597.4 CTD-2049O4 HSCHR16_CTG1_1 JGI fin joingreen 34,065 2 99.994 simple sequence in gap
   KF456175.1 ? HSCHR16_CTG1_1 CONTAINED in AC016597.4 unk joinyellow 371 0 99.730 alignment length < 2000
AC092330.2 RP11-15I10 HSCHR16_CTG1_1 JGI fin joingreen 4,376 0 100
AC008732.9 CTD-2519M14 HSCHR16_CTG1_1 JGI fin joingreen 5,998 1 99.883 simple sequence in gap
   KC877604.1 ? HSCHR16_CTG1_1 CONTAINED in AC008732.9 unk joinyellow 560 0 99.821 alignment length < 2000
AC130449.2 CTA-233A7 HSCHR16_CTG1_1 JGI fin joingreen 148,766 38 99.922 simple sequence in gap
AC009030.10 RP11-13G6 HSCHR16_CTG1_1 JGI fin joingreen 73,718 19 99.935 simple sequence in gap
AC136611.2 RP11-159J3 HSCHR16_CTG1_1 JGI fin joingreen 70,583 1 100 simple sequence in gap
AC138904.3 RP11-57A19 HSCHR16_CTG1_1 JGI fin joingreen 11,064 1 100 simple sequence in gap
AC138894.2 RP11-435I10 HSCHR16_CTG1_1 JGI fin joingreen 68,450 0 100
AC020765.8 RP11-666O2 HSCHR16_CTG1_1 JGI fin joingreen 48,897 0 100
AC145285.2 RP11-1348G14 HSCHR16_CTG1_1 JGI fin joingreen 155,260 1 100 simple sequence in gap
AC116346.2 RP11-24N18 HSCHR16_CTG1_1 JGI fin joingreen 3,016 0 100
AC133550.2 RP11-22P6 HSCHR16_CTG1_1 JGI fin joingreen 20,392 7 99.892 simple sequence in gap
AC109460.3 RP11-264B17 HSCHR16_CTG1_1 JGI fin joingreen 61,988 7 99.984 simple sequence in gap
AC112166.3 CTB-134H23 HSCHR16_CTG1_1 JGI fin joingreen 31,994 14 99.919 simple sequence in gap
AC009093.10 RP11-426C22 HSCHR16_CTG1_1 JGI fin joingreen 14,029 0 100
AC025279.6 RP11-231C14 HSCHR16_CTG1_1 JGI fin joingreen 104,677 2 100 simple sequence in gap
AC133555.3 RP11-345J4 HSCHR16_CTG1_1 JGI fin joingreen 40,825 1 100 simple sequence in gap
AC009086.6 RP11-368N21 HSCHR16_CTG1_1 JGI fin joingreen 59,040 24 99.897 simple sequence in gap
AC023831.9 RP11-74E23 HSCHR16_CTG1_1 JGI fin joingreen 114,956 1 99.999 simple sequence in gap
AC009133.7 ? HSCHR16_CTG1_1 JGI fin joingreen 43,406 23 99.931 simple sequence in gap
   KF456182.1 ? HSCHR16_CTG1_1 CONTAINED in AC009133.7 unk joinyellow 134 0 99.254 identity < 99.6%; alignment length < 2000
AC120114.2 CTD-2574D22 HSCHR16_CTG1_1 JGI fin joingreen 30,645 0 100
   KC877609.1 ? HSCHR16_CTG1_1 CONTAINED in AC120114.2 unk joinyellow 535 0 99.813 alignment length < 2000
   KF459558.1 ? HSCHR16_CTG1_1 CONTAINED in AC120114.2 unk joinyellow 356 0 99.719 alignment length < 2000
AC093512.2 CTD-2515O10 HSCHR16_CTG1_1 JGI fin joingreen 26,798 0 100
AC012645.7 RP11-455F5 HSCHR16_CTG1_1 JGI fin joinyellow 64,567 26 99.907 >0 gap of 25bp or more, not simple sequence
AC106782.5 RP11-347C12 HSCHR16_CTG1_1 JGI fin joingreen 79,802 24 99.927 simple sequence in gap
AC127457.3 RP11-100F10 HSCHR16_CTG1_1 JGI fin joingreen 6,572 0 100
AC116348.3 RP11-297C4 HSCHR16_CTG1_1 JGI fin joinyellow 54,597 23 99.930 >0 gap of 25bp or more, not simple sequence
AC002310.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 66,291 1 99.994 simple sequence in gap
AC093249.4 RP11-146F11 HSCHR16_CTG1_1 JGI fin joingreen 85,973 34 99.917 simple sequence in gap
AC106886.3 RP11-2C24 HSCHR16_CTG1_1 JGI fin joingreen 12,993 7 99.808 simple sequence in gap
   KF456181.1 ? HSCHR16_CTG1_1 CONTAINED in AC106886.3 unk joinyellow 389 0 99.743 alignment length < 2000
   KF456183.1 ? HSCHR16_CTG1_1 CONTAINED in AC106886.3 unk joinyellow 382 0 99.738 alignment length < 2000
AC138417.3 LA16c-367E6 HSCHR16_CTG1_1 JGI fin joingreen 8,578 1 99.918 simple sequence in gap
AC135048.2 RP11-1072A3 HSCHR16_CTG1_1 JGI fin joingreen 62,607 1 99.998
AC135050.3 RP11-196G11 HSCHR16_CTG1_1 JGI fin joingreen 9,267 0 100
   KF459566.1 ? HSCHR16_CTG1_1 CONTAINED in AC135050.3 unk joinyellow 365 0 99.726 alignment length < 2000
AC009088.9 RP11-388M20 HSCHR16_CTG1_1 JGI fin joingreen 2,534 3 99.684 simple sequence in gap
AC093520.4 RP11-120K18 HSCHR16_CTG1_1 JGI fin joingreen 80,013 0 100
AC026471.6 RP11-452L6 HSCHR16_CTG1_1 JGI fin joingreen 1,512 0 100
AC106730.2 CTD-2014E2 HSCHR16_CTG1_1 JGI fin joingreen 20,287 0 100
AC074050.3 CTD-2358C21 HSCHR16_CTG1_1 JGI fin joingreen 30,875 1 100 simple sequence in gap
AC002519.1 ? HSCHR16_CTG1_1 TIGR fin joingreen 13,588 6 99.912 simple sequence in gap
AC034105.7 RP11-170L3 HSCHR16_CTG1_1 JGI fin joingreen 67,292 4 99.952 simple sequence in gap
   KF456187.1 ? HSCHR16_CTG1_1 CONTAINED in AC034105.7 unk joinyellow 380 0 99.737 alignment length < 2000
AC142381.2 RP11-1166P10 HSCHR16_CTG1_1 JGI fin joingreen 29,242 0 100
AC133485.1 RP11-56L13 HSCHR16_CTG1_1 JGI fin joingreen 111,061 1 99.999 simple sequence in gap
AC140878.2 RP11-1292F20 HSCHR16_CTG1_1 JGI fin joingreen 13,811 0 100
AC133548.2 RP11-17M15 HSCHR16_CTG1_1 JGI fin joingreen 30,710 0 100
AC138915.2 RP11-626K17 HSCHR16_CTG1_1 JGI fin joingreen 101,457 0 100
AC137800.3 RP11-652G5 HSCHR16_CTG1_1 JGI fin joingreen 85,354 1 100 simple sequence in gap
AC133569.4 RP11-96K14 HSCHR16_CTG1_1 JGI fin joingreen 22,504 0 100
AC138907.2 RP11-586K12 HSCHR16_CTG1_1 JGI fin joingreen 132,500 0 100
AC137761.3 RP11-67H24 HSCHR16_CTG1_1 JGI fin joingreen 10,273 0 100
AC142086.3 RP11-989E6 HSCHR16_CTG1_1 JGI fin joingreen 26,783 0 100
AC145350.2 RP11-19N8 HSCHR16_CTG1_1 JGI fin joingreen 112,523 0 100
AC138869.2 RP11-1437A8 HSCHR16_CTG1_1 JGI fin
GAP type-2
AC141257.2 RP11-1277H1 HSCHR16_CTG1_1 JGI fin
GAP type-2
AC136944.3 RP11-23E10 HSCHR16_CTG1_1 JGI fin joingreen 63,580 2 100 simple sequence in gap
AC142384.2 RP11-293B20 HSCHR16_CTG1_1 JGI fin joingreen 52,181 0 100
AC136428.3 RP11-104C4 HSCHR16_CTG1_1 JGI fin joingreen 60,678 0 100
AC140658.2 RP11-812E19 HSCHR16_CTG1_1 JGI fin joingreen 86,047 1 100 simple sequence in gap
AC133561.4 RP11-598D12 HSCHR16_CTG1_1 JGI fin joingreen 8,707 0 99.989
AC136932.4 CTD-2522B17 HSCHR16_CTG1_1 JGI fin joinwhite 24,020 5 99.879 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 50bp or more, not simple sequence
FO681541.2 CH17-384E20 HSCHR16_CTG1_1 SC top
GAP TYPE-3
FP325313.4 CH17-342O10 HSCHR16_CTG1_2 SC fin joinyellow 1,390 0 99.712 alignment length < 2000
FO681535.2 ABC7-42470300N12 HSCHR16_CTG1_2 SC fin
GAP TYPE-3
   ABBA01002124.1 ? HSCHR16_CTG3 MINUS wgs
   GAP TYPE-2 4160 PAIRED ENDS
   ABBA01002123.1 ? HSCHR16_CTG3 MINUS wgs
   GAP TYPE-2 537 PAIRED ENDS
   ABBA01002122.1 ? HSCHR16_CTG3 MINUS wgs
   AC129779.2 RP11-1360O11 HSCHR16_CTG3 CONTAINED_TURNOUT in ABBA01002122.1 fin joinyellow 28,420 63 98.825 identity < 99.6%
AC135776.3 CTD-2144E22 HSCHR16_CTG3 JGI fin joinpurple 131,349 27 99.902 approved certificate; >0 gap of 50bp or more, not simple sequence
   KC877611.1 ? HSCHR16_CTG3 CONTAINED in AC135776.3 unk joinyellow 544 0 99.816 alignment length < 2000
AC092133.2 RP11-20D16 HSCHR16_CTG3 JGI fin joingreen 8,901 0 100
AC023824.6 RP11-244B22 HSCHR16_CTG3 JGI fin joingreen 70,676 11 99.899 simple sequence in gap
AC007353.5 RP11-488I20 HSCHR16_CTG3 JGI fin joingreen 14,118 1 99.950 simple sequence in gap
AC018558.6 RP11-80F22 HSCHR16_CTG3 JGI fin joingreen 6,178 0 100
   KF459807.1 ? HSCHR16_CTG3 CONTAINED in AC018558.6 unk joinyellow 407 0 99.754 alignment length < 2000
AC092325.2 RP11-14K3 HSCHR16_CTG3 JGI fin joingreen 7,815 0 99.974
AC106785.3 RP11-352B15 HSCHR16_CTG3 JGI fin joingreen 90,420 6 99.980 simple sequence in gap
AC116553.2 RP11-43P5 HSCHR16_CTG3 JGI fin joingreen 45,231 1 100 simple sequence in gap
AC109490.3 RP11-65B9 HSCHR16_CTG3 JGI fin joingreen 2,000 0 100
FP325312.10 CH17-297E19 HSCHR16_CTG3 SC fin joingreen 51,036 2 99.955
AUXG01000322.1 ? HSCHR16_CTG3 None wgs
   GAP TYPE-2 242 PAIRED ENDS
AUXG01000323.1 ? HSCHR16_CTG3 None wgs
GAP type-3
GAP CENTROMERE_DATA_START
GJ212046.1 ? CEN16_1 None wgs
   GAP TYPE-3 100 ALIGN GENUS
ABBA01007551.1 ? CEN16_2 None wgs
   GAP TYPE-3 100 ALIGN GENUS
GJ212051.1 ? CEN16_3 None wgs
   GAP TYPE-3 100 ALIGN GENUS
ABBA01004286.1 ? CEN16_4 None wgs
   GAP TYPE-2 6662 PAIRED ENDS
ABBA01004287.1 ? CEN16_4 None wgs
GAP CENTROMERE_DATA_END
GAP HETEROCHROMATIN 8000000
FP325338.8 CH17-251E23 HSCHR16_CTG3_1 SC act joinwhite 623 20 97.271 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 50bp or more, not simple sequence; identity < 98%
FP885539.3 RP11-696P19 HSCHR16_CTG3_1 SC fin joingreen 2,000 0 100
AC092368.3 RP11-46D6 HSCHR16_CTG3_1 JGI fin joingreen 114,893 0 100
AC012186.8 RP11-93O14 HSCHR16_CTG3_1 JGI fin joingreen 17,960 1 100 simple sequence in gap
AC007225.2 RP11-480G7 HSCHR16_CTG3_1 JGI fin joingreen 25,562 0 100
AC018845.7 RP11-169E6 HSCHR16_CTG3_1 JGI fin joingreen 124,713 2 100 simple sequence in gap
   KF511225.1 ? HSCHR16_CTG3_1 CONTAINED in AC018845.7 fin joinyellow 390 1 100 alignment length < 2000
AC007338.6 RP11-283C7 HSCHR16_CTG3_1 JGI fin joingreen 13,506 0 100
AC007494.8 RP11-329J18 HSCHR16_CTG3_1 JGI fin joingreen 6,502 0 100
AC007533.2 RP11-474B12 HSCHR16_CTG3_1 JGI fin joingreen 45,732 1 100 simple sequence in gap
   KF456184.1 ? HSCHR16_CTG3_1 CONTAINED in AC007533.2 unk joinyellow 395 0 99.747 alignment length < 2000
AC007599.6 RP11-177N22 HSCHR16_CTG3_1 JGI fin joingreen 11,570 0 99.983
AC092374.4 RP11-637I8 HSCHR16_CTG3_1 JGI fin joingreen 121,067 5 99.993 simple sequence in gap
AC141846.3 CTB-55P19 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
   KC877605.1 ? HSCHR16_CTG3_1 CONTAINED in AC141846.3 unk joinyellow 406 0 99.754 alignment length < 2000
AC147770.1 16A02 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC140542.3 8989147F6 HSCHR16_CTG3_1 JGI fin joingreen 28,913 1 99.993 simple sequence in gap
AC007857.2 RP11-523L20 HSCHR16_CTG3_1 JGI fin joingreen 15,456 1 99.993
AC007013.2 LA16c-20A2 HSCHR16_CTG3_1 JGI fin joingreen 20,903 1 99.986 simple sequence in gap
AC096996.2 RP11-3M1 HSCHR16_CTG3_1 JGI fin joingreen 134,048 3 99.990 simple sequence in gap
AC007600.6 RP11-264A16 HSCHR16_CTG3_1 JGI fin joingreen 1,525 0 100
AC023818.5 CTD-2600H12 HSCHR16_CTG3_1 JGI fin joingreen 1,754 0 100
AC026470.6 RP11-44I10 HSCHR16_CTG3_1 JGI fin joingreen 74,910 0 99.999
AC023813.6 CTC-527H23 HSCHR16_CTG3_1 JGI fin joingreen 2,704 1 99.667 simple sequence in gap
AC007611.5 RP11-452G23 HSCHR16_CTG3_1 JGI fin joingreen 93,087 22 99.906 simple sequence in gap
AC023827.7 RP11-42I10 HSCHR16_CTG3_1 JGI fin joingreen 57,712 16 99.846 simple sequence in gap
AC007500.7 RP11-545E2 HSCHR16_CTG3_1 JGI fin joingreen 25,276 8 99.913 simple sequence in gap
AC007502.6 RP11-98C8 HSCHR16_CTG3_1 JGI fin joinyellow 37,056 12 99.846 >0 gap of 25bp or more, not simple sequence
   KF456185.1 ? HSCHR16_CTG3_1 CONTAINED in AC007502.6 unk joinyellow 376 0 99.734 alignment length < 2000
AC044798.7 RP11-22D3 HSCHR16_CTG3_1 JGI fin joingreen 51,406 5 99.899 simple sequence in gap
AC007614.7 RP11-491F9 HSCHR16_CTG3_1 JGI fin joingreen 66,933 0 100
AC007861.5 RP11-189E14 HSCHR16_CTG3_1 JGI fin joingreen 46,307 0 100
AC007607.6 RP11-369H7 HSCHR16_CTG3_1 JGI fin joinyellow 34,198 11 99.848 half-dovetail of >0bp and <=50bp
AC007339.8 RP11-305A7 HSCHR16_CTG3_1 JGI fin joingreen 100,583 27 99.872 simple sequence in gap
AC027348.8 CTD-2595P9 HSCHR16_CTG3_1 JGI fin joingreen 27,472 8 99.847 simple sequence in gap
   KF456193.1 ? HSCHR16_CTG3_1 CONTAINED in AC027348.8 unk joinyellow 336 0 99.702 alignment length < 2000
AC007603.5 RP11-305A4 HSCHR16_CTG3_1 JGI fin joingreen 24,735 11 99.915 simple sequence in gap
AC007610.10 RP11-429P3 HSCHR16_CTG3_1 JGI fin joingreen 75,800 0 99.997
AC007597.3 RP11-137H10 HSCHR16_CTG3_1 JGI fin joingreen 75,174 10 99.973 simple sequence in gap
   KF456186.1 ? HSCHR16_CTG3_1 CONTAINED in AC007597.3 unk joinyellow 378 0 99.735 alignment length < 2000
AC023826.6 RP11-380E14 HSCHR16_CTG3_1 JGI fin joingreen 104,088 1 100 simple sequence in gap
AC007493.7 RP11-21B23 HSCHR16_CTG3_1 JGI fin joingreen 8,551 0 100
AC007334.8 RP11-147B17 HSCHR16_CTG3_1 JGI fin joingreen 119,286 6 99.984 simple sequence in gap
AC007608.7 RP11-401P9 HSCHR16_CTG3_1 JGI fin joingreen 28,980 0 100
AC007728.4 RP11-327F22 HSCHR16_CTG3_1 JGI fin joingreen 1,597 0 99.875
   KF456188.1 ? HSCHR16_CTG3_1 CONTAINED in AC007728.4 unk joinyellow 350 0 99.714 alignment length < 2000
AC025810.5 CTD-2034I21 HSCHR16_CTG3_1 JGI fin joingreen 25,390 5 99.819 simple sequence in gap
AC027688.5 RP11-883G14 HSCHR16_CTG3_1 JGI fin joingreen 15,080 0 100
AC009166.4 ? HSCHR16_CTG3_1 JGI fin joingreen 31,574 6 99.883 simple sequence in gap
AC137494.1 LA16c-491E3 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC147769.1 16A01 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 99.900
AC137527.3 X504C1 HSCHR16_CTG3_1 JGI fin joingreen 30,388 4 99.921 simple sequence in gap
AC087564.6 RP11-437L7 HSCHR16_CTG3_1 JGI fin joingreen 56,487 0 100
AC007344.3 RP11-466G2 HSCHR16_CTG3_1 JGI fin joingreen 5,785 4 99.723 simple sequence in gap
AC084058.6 CTD-2119F7 HSCHR16_CTG3_1 JGI fin joingreen 12,131 0 99.918
AC109600.2 RP11-7O14 HSCHR16_CTG3_1 JGI fin joingreen 104,510 0 100
AC023823.7 RP11-163K4 HSCHR16_CTG3_1 JGI fin joingreen 28,835 2 99.983 simple sequence in gap
AC007489.3 RP11-122K22 HSCHR16_CTG3_1 JGI fin joingreen 70,728 0 99.980
   KF456194.1 ? HSCHR16_CTG3_1 CONTAINED in AC007489.3 unk joinyellow 388 0 99.742 alignment length < 2000
   KF456190.1 ? HSCHR16_CTG3_1 CONTAINED in AC007489.3 unk joinyellow 384 0 99.740 alignment length < 2000
   KF456189.1 ? HSCHR16_CTG3_1 CONTAINED in AC007489.3 unk joinyellow 389 0 99.743 alignment length < 2000
   KF510419.1 ? HSCHR16_CTG3_1 CONTAINED in AC007489.3 fin joinyellow 166 1 100 alignment length < 2000
   KF456197.1 ? HSCHR16_CTG3_1 CONTAINED in AC007489.3 unk joinyellow 281 0 99.644 alignment length < 2000
AC009039.7 RP11-152O14 HSCHR16_CTG3_1 JGI fin joingreen 16,582 0 100
AC007341.10 RP11-381L15 HSCHR16_CTG3_1 JGI fin joinpurple 93,197 28 99.854 approved certificate; >0 gap of 50bp or more, not simple sequence
AC007333.8 RP11-142G1 HSCHR16_CTG3_1 JGI fin joingreen 21,655 2 99.995 simple sequence in gap
   KF456192.1 ? HSCHR16_CTG3_1 CONTAINED in AC007333.8 unk joinyellow 382 0 99.738 alignment length < 2000
   KF456195.1 ? HSCHR16_CTG3_1 CONTAINED in AC007333.8 unk joinyellow 384 0 99.740 alignment length < 2000
AC007501.2 RP11-67I13 HSCHR16_CTG3_1 JGI fin joingreen 111,263 29 99.939 simple sequence in gap
AC007490.7 RP11-132F7 HSCHR16_CTG3_1 JGI fin joingreen 21,102 7 99.919 simple sequence in gap
AC093514.2 CTD-2517O22 HSCHR16_CTG3_1 JGI fin joingreen 126,160 37 99.867 simple sequence in gap
AC026462.5 RP11-297L17 HSCHR16_CTG3_1 JGI fin joingreen 17,956 0 100
AC007340.8 RP11-358O5 HSCHR16_CTG3_1 JGI fin joingreen 11,245 0 100
AC007346.6 RP11-467J12 HSCHR16_CTG3_1 JGI fin joingreen 40,490 25 99.884 simple sequence in gap
AC007906.8 RP11-295M3 HSCHR16_CTG3_1 JGI fin joingreen 84,711 0 99.999
AC079416.4 RP11-454F8 HSCHR16_CTG3_1 JGI fin joingreen 108,231 4 99.976 simple sequence in gap
AC007345.5 RP11-466N18 HSCHR16_CTG3_1 JGI fin joingreen 80,596 19 99.924 simple sequence in gap
AC007342.6 RP11-44F14 HSCHR16_CTG3_1 JGI fin joingreen 29,793 3 99.956 simple sequence in gap
AC007497.6 RP11-36I17 HSCHR16_CTG3_1 JGI fin joingreen 22,681 2 99.960 simple sequence in gap
AC084795.5 CTD-2007P3 HSCHR16_CTG3_1 JGI fin joingreen 89,803 17 99.932 simple sequence in gap
AC007909.8 RP11-515G11 HSCHR16_CTG3_1 JGI fin joingreen 20,695 0 100
AC007496.6 RP11-357N13 HSCHR16_CTG3_1 JGI fin joingreen 65,966 1 99.995 simple sequence in gap
AC007347.3 RP11-488J11 HSCHR16_CTG3_1 JGI fin joingreen 23,578 1 99.996 simple sequence in gap
AC007907.3 RP11-324D17 HSCHR16_CTG3_1 JGI fin joingreen 6,846 1 99.752 simple sequence in gap
AC018553.6 RP11-434E6 HSCHR16_CTG3_1 JGI fin joingreen 110,391 2 100 simple sequence in gap
AC007343.7 RP11-463J22 HSCHR16_CTG3_1 JGI fin joingreen 31,606 7 99.946 simple sequence in gap
AC079412.5 CTD-2302M15 HSCHR16_CTG3_1 JGI fin joingreen 21,161 9 99.792 simple sequence in gap
AC007491.7 ? HSCHR16_CTG3_1 JGI fin joingreen 24,549 6 99.780 simple sequence in gap
AC106742.3 RP11-1136G4 HSCHR16_CTG3_1 JGI fin joingreen 80,514 27 99.899 simple sequence in gap
AC108084.4 CTD-2013N18 HSCHR16_CTG3_1 JGI fin joingreen 5,783 2 99.896 simple sequence in gap
AC106738.3 CTD-3032H12 HSCHR16_CTG3_1 JGI fin joingreen 46,643 7 99.923 simple sequence in gap
AC109136.1 RP11-629D22 HSCHR16_CTG3_1 JGI fin joingreen 24,026 4 99.788 simple sequence in gap
AC109462.2 RP11-26L20 HSCHR16_CTG3_1 JGI fin joingreen 131,156 0 100
AC092722.5 RP11-517M14 HSCHR16_CTG3_1 JGI fin joingreen 31,383 2 99.955 simple sequence in gap
AC007336.6 RP11-212I21 HSCHR16_CTG3_1 JGI fin joingreen 31,247 10 99.923 simple sequence in gap
AC026802.9 CTD-2545G24 HSCHR16_CTG3_1 JGI fin joinpurple 148,022 21 99.915 approved certificate; >0 gap of 50bp or more, not simple sequence
AC136621.2 RP11-481F24 HSCHR16_CTG3_1 JGI fin joingreen 48,533 0 100
AC147362.2 RP11-449J19 HSCHR16_CTG3_1 JGI fin joingreen 61,158 0 100
+A AC007335.7 RP11-165M2 HSCHR16_CTG3_1 JGI fin joingreen 26,197 0 100
AC040168.8 RP11-461O7 HSCHR16_CTG3_1 JGI fin joingreen 143,963 0 100
AC007495.9 RP11-355E10 HSCHR16_CTG3_1 JGI fin joingreen 15,101 4 99.788 simple sequence in gap
   KF456191.1 ? HSCHR16_CTG3_1 CONTAINED in AC007495.9 unk joinyellow 330 0 99.697 alignment length < 2000
AC079411.6 CTD-2050B12 HSCHR16_CTG3_1 JGI fin joingreen 52,262 2 100 simple sequence in gap
AC009102.10 RP11-441F2 HSCHR16_CTG3_1 JGI fin joingreen 91,020 0 100
AC092140.4 RP11-413H22 HSCHR16_CTG3_1 JGI fin joingreen 37,033 0 100
AC009155.3 RP11-5A3 HSCHR16_CTG3_1 JGI fin joinpurple 87,041 29 99.871 approved certificate; >0 gap of 50bp or more, not simple sequence
AC026461.11 RP11-249C24 HSCHR16_CTG3_1 JGI fin joingreen 67,859 21 99.857 simple sequence in gap
AC106779.3 RP11-343H19 HSCHR16_CTG3_1 JGI fin joingreen 20,368 2 99.985 simple sequence in gap
AC127456.2 CTD-3175N14 HSCHR16_CTG3_1 JGI fin joingreen 8,949 1 99.944 simple sequence in gap
AC012181.8 RP11-325K4 HSCHR16_CTG3_1 JGI fin joingreen 6,197 5 99.790 simple sequence in gap
AC023825.8 RP11-322D14 HSCHR16_CTG3_1 JGI fin joingreen 113,840 32 99.886 simple sequence in gap
AC009090.12 RP11-407G23 HSCHR16_CTG3_1 JGI fin joingreen 22,883 2 99.974 simple sequence in gap
AC108081.2 CTC-661I16 HSCHR16_CTG3_1 JGI fin joingreen 39,184 17 99.939 simple sequence in gap
AC009052.8 ? HSCHR16_CTG3_1 JGI fin joinyellow 152,537 49 99.893 >0 gap of 25bp or more, not simple sequence
AC004382.1 ? HSCHR16_CTG3_1 TIGR fin joingreen 2,784 0 100
AC027349.3 CTD-3083H4 HSCHR16_CTG3_1 JGI fin joinyellow 18,085 8 99.867 half-dovetail of >0bp and <=50bp
AC018552.6 RP11-405F3 HSCHR16_CTG3_1 JGI fin joingreen 31,120 24 99.753 simple sequence in gap
AC092118.3 CTD-2600O9 HSCHR16_CTG3_1 JGI fin joingreen 20,569 9 99.820 simple sequence in gap
   FO082293.1 PCR_RP11_AC092118_1 HSCHR16_CTG3_1 CONTAINED in AC092118.3 unk joinyellow 470 2 99.574 identity < 99.6%; alignment length < 2000
AC010543.9 RP11-440K14 HSCHR16_CTG3_1 JGI fin joingreen 92,627 0 100
AC012182.7 RP11-332G1 HSCHR16_CTG3_1 JGI fin joingreen 7,550 1 99.947 simple sequence in gap
AC026771.6 CTB-134F13 HSCHR16_CTG3_1 JGI fin joingreen 47,543 7 99.966 simple sequence in gap
AC009107.11 RP11-459F6 HSCHR16_CTG3_1 JGI fin joingreen 8,595 6 99.802 simple sequence in gap
AC084063.5 RP11-255J12 HSCHR16_CTG3_1 JGI fin joingreen 13,513 0 100
AC009118.11 RP11-481J2 HSCHR16_CTG3_1 JGI fin joingreen 43,124 28 99.877 simple sequence in gap
   KF456201.1 ? HSCHR16_CTG3_1 CONTAINED in AC009118.11 unk joinyellow 388 0 99.742 alignment length < 2000
AC010287.9 CTA-331F8 HSCHR16_CTG3_1 JGI fin joingreen 82,320 26 99.938 simple sequence in gap
AC012183.9 RP11-451N19 HSCHR16_CTG3_1 JGI fin joingreen 69,117 4 100 simple sequence in gap
AC092378.4 RP11-700H13 HSCHR16_CTG3_1 JGI fin joingreen 87,455 1 99.999
AC012323.7 RP11-89O14 HSCHR16_CTG3_1 JGI fin joingreen 51,504 18 99.891 simple sequence in gap
AC106793.3 RP11-410D17 HSCHR16_CTG3_1 JGI fin joingreen 47,346 0 100
AC092121.3 RP11-102D18 HSCHR16_CTG3_1 JGI fin joingreen 32,467 0 100
AC009147.9 RP11-55H18 HSCHR16_CTG3_1 JGI fin joingreen 55,752 2 99.989 simple sequence in gap
AC040163.3 RP11-1M1 HSCHR16_CTG3_1 JGI fin joingreen 17,334 0 100
   KF456198.1 ? HSCHR16_CTG3_1 CONTAINED in AC040163.3 unk joinyellow 391 0 99.744 alignment length < 2000
   KF456196.1 ? HSCHR16_CTG3_1 CONTAINED in AC040163.3 unk joinyellow 211 0 99.526 identity < 99.6%; alignment length < 2000
AC040171.4 RP11-52D13 HSCHR16_CTG3_1 JGI fin joingreen 57,580 14 99.948 simple sequence in gap
AC026457.8 RP11-105C20 HSCHR16_CTG3_1 JGI fin joingreen 18,464 0 100
AC092350.4 RP11-29G3 HSCHR16_CTG3_1 JGI fin joingreen 22,018 1 100 simple sequence in gap
AC009069.3 RP11-314L21 HSCHR16_CTG3_1 JGI fin joinpurple 73,786 32 99.828 approved certificate; >0 gap of 50bp or more, not simple sequence
AC009094.7 RP11-430C1 HSCHR16_CTG3_1 JGI fin joingreen 6,199 1 99.871 simple sequence in gap
AC018554.7 RP11-457D20 HSCHR16_CTG3_1 JGI fin joingreen 26,058 3 99.985 simple sequence in gap
AC009081.8 RP11-354I13 HSCHR16_CTG3_1 JGI fin joingreen 60,720 0 100
AC018555.5 RP11-486F10 HSCHR16_CTG3_1 JGI fin joingreen 27,304 0 100
AC009080.8 RP11-341K23 HSCHR16_CTG3_1 JGI fin joingreen 84,048 1 99.999 simple sequence in gap
AC009156.10 RP11-5G20 HSCHR16_CTG3_1 JGI fin joingreen 36,128 0 100
AC009169.9 RP11-90K18 HSCHR16_CTG3_1 JGI fin joingreen 108,993 2 100
AC026473.7 RP11-51O6 HSCHR16_CTG3_1 JGI fin joingreen 10,802 5 99.806 simple sequence in gap
AC097275.2 RP11-23O7 HSCHR16_CTG3_1 JGI fin joingreen 100,864 0 100
AC040166.6 RP11-44I4 HSCHR16_CTG3_1 JGI fin joingreen 35,498 0 100
AC026475.6 RP11-71H23 HSCHR16_CTG3_1 JGI fin joingreen 90,322 1 100 simple sequence in gap
AC016647.7 RP11-89G14 HSCHR16_CTG3_1 JGI fin joingreen 14,048 0 100
AC092136.3 RP11-299F9 HSCHR16_CTG3_1 JGI fin joingreen 61,482 0 100
AC092125.2 RP11-109D24 HSCHR16_CTG3_1 JGI fin joingreen 90,885 1 100 simple sequence in gap
AC092129.3 RP11-140O8 HSCHR16_CTG3_1 JGI fin joingreen 66,880 3 99.988 simple sequence in gap
AC012174.5 RP11-157H19 HSCHR16_CTG3_1 JGI fin joingreen 68,788 6 99.994 simple sequence in gap
AC040161.5 CTC-420A11 HSCHR16_CTG3_1 JGI fin joingreen 1,816 0 99.890
AC092124.2 RP11-1079H2 HSCHR16_CTG3_1 JGI fin joingreen 76,102 12 99.928 simple sequence in gap
AC090551.6 RP11-197K24 HSCHR16_CTG3_1 JGI fin joingreen 26,340 0 100
AC009161.14 RP11-75D3 HSCHR16_CTG3_1 JGI fin joingreen 9,132 2 100 simple sequence in gap
AC094083.4 CTD-2012B15 HSCHR16_CTG3_1 JGI fin joingreen 84,950 14 99.962 simple sequence in gap
   KC877612.1 ? HSCHR16_CTG3_1 CONTAINED in AC094083.4 unk joinyellow 536 0 99.813 alignment length < 2000
AC009110.10 RP11-467O15 HSCHR16_CTG3_1 JGI fin joingreen 2,622 0 100
AC092116.3 CTD-2133M23 HSCHR16_CTG3_1 JGI fin joingreen 18,404 14 99.788 simple sequence in gap
AC010546.10 RP11-50O21 HSCHR16_CTG3_1 JGI fin joingreen 81,958 0 100
AC009111.8 RP11-468D1 HSCHR16_CTG3_1 JGI fin joingreen 3,114 1 99.968 simple sequence in gap
AC040174.5 RP11-96H17 HSCHR16_CTG3_1 JGI fin joinyellow 97,362 25 99.917 >0 gap of 25bp or more, not simple sequence
AC004513.1 ? HSCHR16_CTG3_1 TIGR fin joingreen 3,843 3 99.844 simple sequence in gap
AC117984.2 CTD-2503H21 HSCHR16_CTG3_1 JGI fin joingreen 54,776 16 99.865 simple sequence in gap
AC138305.2 RP11-2K6 HSCHR16_CTG3_1 JGI fin joingreen 118,906 2 99.999 simple sequence in gap
AC012172.7 RP11-148F12 HSCHR16_CTG3_1 JGI fin joingreen 17,164 0 100
AC009085.5 RP11-368L12 HSCHR16_CTG3_1 JGI fin joingreen 82,283 33 99.868 simple sequence in gap
AC092126.3 RP11-1114G22 HSCHR16_CTG3_1 JGI fin joingreen 64,446 0 99.998
   KF456199.1 ? HSCHR16_CTG3_1 CONTAINED in AC092126.3 unk joinyellow 65 0 98.462 identity < 99.6%; alignment length < 2000
AC018846.5 RP11-370P15 HSCHR16_CTG3_1 JGI fin joingreen 4,684 0 100
AC092337.3 RP11-21L1 HSCHR16_CTG3_1 JGI fin joingreen 38,079 3 99.992 simple sequence in gap
   KF456206.1 ? HSCHR16_CTG3_1 CONTAINED in AC092337.3 unk joinyellow 394 0 99.746 alignment length < 2000
AC012177.6 RP11-231O22 HSCHR16_CTG3_1 JGI fin joingreen 42,063 2 99.991 simple sequence in gap
AC093536.4 RP11-744D14 HSCHR16_CTG3_1 JGI fin joingreen 32,845 0 100
AC012322.8 ? HSCHR16_CTG3_1 JGI fin joingreen 106,133 3 100
   KF511229.1 ? HSCHR16_CTG3_1 CONTAINED in AC012322.8 fin joinyellow 58 1 100 alignment length < 2000
AC009109.9 RP11-467L24 HSCHR16_CTG3_1 JGI fin joingreen 5,106 0 100
AC092323.3 RP11-133B5 HSCHR16_CTG3_1 JGI fin joingreen 143,997 7 99.993 simple sequence in gap
AC092131.5 RP11-164F14 HSCHR16_CTG3_1 JGI fin joinpurple 10,670 7 99.691 approved certificate
AC004533.1 ? HSCHR16_CTG3_1 TIGR fin joingreen 70,763 29 99.853 simple sequence in gap
AC009101.7 RP11-439I14 HSCHR16_CTG3_1 JGI fin joingreen 2,511 0 100
AC010533.6 RP11-229O3 HSCHR16_CTG3_1 JGI fin joingreen 8,447 0 100
AC137643.3 RP11-95H3 HSCHR16_CTG3_1 JGI fin joingreen 21,172 0 100
AC009055.10 RP11-256I9 HSCHR16_CTG3_1 JGI fin joingreen 3,009 0 100
AC123909.2 RP11-27L11 HSCHR16_CTG3_1 JGI fin joingreen 114,611 36 99.897 simple sequence in gap
AC009062.8 RP11-298C15 HSCHR16_CTG3_1 JGI fin joingreen 39,318 19 99.891 simple sequence in gap
AC092138.4 RP11-351A20 HSCHR16_CTG3_1 JGI fin joingreen 36,799 0 100
   KF456202.1 ? HSCHR16_CTG3_1 CONTAINED in AC092138.4 unk joinyellow 264 0 99.621 alignment length < 2000
AC022164.8 RP11-513N24 HSCHR16_CTG3_1 JGI fin joingreen 76,584 0 100
AC025281.8 RP11-356O24 HSCHR16_CTG3_1 JGI fin joingreen 13,171 0 99.992
AC009024.6 RP11-112G1 HSCHR16_CTG3_1 JGI fin joingreen 52,663 7 99.945 simple sequence in gap
AC009058.10 RP11-292B23 HSCHR16_CTG3_1 JGI fin joingreen 9,305 0 99.850
AC012325.9 RP11-93H5 HSCHR16_CTG3_1 JGI fin joingreen 113,652 23 99.924 simple sequence in gap
AC132186.3 CTD-2258A20 HSCHR16_CTG3_1 JGI fin joingreen 7,438 0 99.960
   KC877617.1 ? HSCHR16_CTG3_1 CONTAINED in AC132186.3 unk joinyellow 546 0 99.817 alignment length < 2000
AC010542.7 RP11-403P17 HSCHR16_CTG3_1 JGI fin joingreen 105,133 2 100 simple sequence in gap
AC018557.9 RP11-63M22 HSCHR16_CTG3_1 JGI fin joingreen 11,395 0 100
AC044802.6 RP11-61A14 HSCHR16_CTG3_1 JGI fin joingreen 16,200 2 99.975 simple sequence in gap
AC009084.9 RP11-361L15 HSCHR16_CTG3_1 JGI fin joingreen 37,648 0 100
AC074143.5 RP11-5A19 HSCHR16_CTG3_1 JGI fin joingreen 55,066 3 99.996 simple sequence in gap
AC040160.4 CTC-277H1 HSCHR16_CTG3_1 JGI fin joingreen 35,227 2 99.997 simple sequence in gap
   KC877606.1 ? HSCHR16_CTG3_1 CONTAINED in AC040160.4 unk joinyellow 374 0 99.733 alignment length < 2000
AC009061.10 RP11-297D21 HSCHR16_CTG3_1 JGI fin joingreen 95,642 4 99.997 simple sequence in gap
AC027682.10 CTD-2012K14 HSCHR16_CTG3_1 JGI fin joingreen 8,295 0 100
AC009095.7 ? HSCHR16_CTG3_1 JGI fin joingreen 39,054 1 100
AC010530.8 RP11-167P11 HSCHR16_CTG3_1 JGI fin joingreen 3,486 0 100
AC040162.5 CTC-479C5 HSCHR16_CTG3_1 JGI fin joingreen 7,351 1 99.986 simple sequence in gap
   KC877614.1 ? HSCHR16_CTG3_1 CONTAINED in AC040162.5 unk joinyellow 491 0 99.796 alignment length < 2000
AC130462.3 RP11-67A1 HSCHR16_CTG3_1 JGI fin joingreen 23,353 2 99.991 simple sequence in gap
   KF456209.1 ? HSCHR16_CTG3_1 CONTAINED in AC130462.3 unk joinyellow 278 0 99.640 alignment length < 2000
AC020978.10 RP11-96D1 HSCHR16_CTG3_1 JGI fin joingreen 21,215 0 100
AC099521.2 RP11-71L14 HSCHR16_CTG3_1 JGI fin joingreen 125,793 0 100
AC009162.11 RP11-76H6 HSCHR16_CTG3_1 JGI fin joingreen 36,623 0 100
AC126773.3 RP11-615I2 HSCHR16_CTG3_1 JGI fin joinyellow 46,746 15 99.917 >0 gap of 25bp or more, not simple sequence
AC099314.3 RP11-354M1 HSCHR16_CTG3_1 JGI fin joingreen 114,300 1 100 simple sequence in gap
AC009082.7 RP11-354N7 HSCHR16_CTG3_1 JGI fin joingreen 24,489 0 100
AC009137.8 RP11-521L9 HSCHR16_CTG3_1 JGI fin joingreen 75,718 9 99.968 simple sequence in gap
AC009027.10 RP11-123C5 HSCHR16_CTG3_1 JGI fin joingreen 96,295 0 100
+A AC009131.6 RP11-502K10 HSCHR16_CTG3_1 JGI fin joingreen 2,355 0 100
AC026474.7 RP11-70O5 HSCHR16_CTG3_1 JGI fin joingreen 143,646 20 99.983 simple sequence in gap
AC026464.7 RP11-343C2 HSCHR16_CTG3_1 JGI fin joingreen 16,081 0 100
AC009032.8 RP11-140H17 HSCHR16_CTG3_1 JGI fin joingreen 59,984 8 99.970 simple sequence in gap
AC012321.8 RP11-311C24 HSCHR16_CTG3_1 JGI fin joingreen 2,104 0 99.952
AC092115.2 CTD-2033A16 HSCHR16_CTG3_1 JGI fin joingreen 18,832 9 99.841 simple sequence in gap
   KF456205.1 ? HSCHR16_CTG3_1 CONTAINED in AC092115.2 unk joinyellow 391 0 99.744 alignment length < 2000
AC026468.7 RP11-419C5 HSCHR16_CTG3_1 JGI fin joingreen 48,226 5 99.990 simple sequence in gap
AC009022.10 RP11-106J23 HSCHR16_CTG3_1 JGI fin joingreen 44,513 0 99.998
AC009060.7 RP11-296I10 HSCHR16_CTG3_1 JGI fin joingreen 29,296 0 100
AC093491.3 RP11-410N2 HSCHR16_CTG3_1 JGI fin joingreen 132,880 10 99.996 simple sequence in gap
AC012184.7 RP11-529K1 HSCHR16_CTG3_1 JGI fin joingreen 22,846 0 100
AC106804.4 RP11-49C24 HSCHR16_CTG3_1 JGI fin joingreen 39,657 0 99.987
AC020763.6 RP11-394B2 HSCHR16_CTG3_1 JGI fin joingreen 480 0 100
   KF456200.1 ? HSCHR16_CTG3_1 CONTAINED in AC020763.6 unk joinyellow 367 0 99.728 alignment length < 2000
AC027281.10 RP11-424M24 HSCHR16_CTG3_1 JGI fin joingreen 10,021 0 100
AC138625.1 RP11-23E19 HSCHR16_CTG3_1 JGI fin joingreen 2,518 0 99.881
AC099495.2 RP11-1145B23 HSCHR16_CTG3_1 JGI fin joingreen 48,749 5 99.988 simple sequence in gap
AC106736.4 CTD-2520I13 HSCHR16_CTG3_1 JGI fin joingreen 5,893 0 100
   KC877607.1 ? HSCHR16_CTG3_1 CONTAINED in AC106736.4 unk joinyellow 548 0 99.818 alignment length < 2000
   KF456204.1 ? HSCHR16_CTG3_1 CONTAINED in AC106736.4 unk joinyellow 362 0 99.724 alignment length < 2000
AC010547.9 RP11-510M2 HSCHR16_CTG3_1 JGI fin joingreen 38,067 8 99.950 simple sequence in gap
AC009097.9 RP11-432I5 HSCHR16_CTG3_1 JGI fin joingreen 60,660 2 100 simple sequence in gap
   KF456207.1 ? HSCHR16_CTG3_1 CONTAINED in AC009097.9 unk joinyellow 365 0 99.726 alignment length < 2000
AC010653.10 RP11-417N10 HSCHR16_CTG3_1 JGI fin joingreen 23,290 0 100
AC009127.10 RP11-498D10 HSCHR16_CTG3_1 JGI fin joingreen 69,849 5 99.990 simple sequence in gap
   KF459693.1 ? HSCHR16_CTG3_1 CONTAINED in AC009127.10 unk joinyellow 334 1 100 alignment length < 2000
AC009087.4 RP11-384M15 HSCHR16_CTG3_1 JGI fin joinpurple 59,761 2 99.978 approved certificate; >0 gap of 500bp or more, not simple sequence
AC004682.1 ? HSCHR16_CTG3_1 TIGR fin joingreen 54,487 5 99.983 simple sequence in gap
AC009075.7 RP11-328J14 HSCHR16_CTG3_1 JGI fin joingreen 12,116 1 99.951 simple sequence in gap
AC004158.1 ? HSCHR16_CTG3_1 TIGR fin joingreen 20,987 5 99.910 simple sequence in gap
AC092289.3 CTD-2305H1 HSCHR16_CTG3_1 JGI fin joingreen 79,064 0 99.991
AC010748.5 CTD-2532L16 HSCHR16_CTG3_1 WUGSC fin joingreen 200 0 100
   KF456212.1 ? HSCHR16_CTG3_1 CONTAINED in AC010748.5 unk joinyellow 280 0 99.643 alignment length < 2000
AC004943.2 RP5-991G20 HSCHR16_CTG3_1 WUGSC fin joingreen 6,507 3 99.923 simple sequence in gap
AC132068.2 CTD-2326C4 HSCHR16_CTG3_1 JGI fin joingreen 126,135 45 99.893 simple sequence in gap
AC002044.1 ? HSCHR16_CTG3_1 TIGR fin joinpurple 42,139 19 99.934 approved certificate; >0 gap of 500bp or more, not simple sequence
AC116667.2 RP11-346C20 HSCHR16_CTG3_1 JGI fin joingreen 2,719 1 99.890 simple sequence in gap
AC140912.2 8888206B9 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC147771.1 16A03 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC137520.4 1411G11 HSCHR16_CTG3_1 JGI fin joingreen 5,886 1 99.847 simple sequence in gap
AC009033.10 RP11-140I24 HSCHR16_CTG3_1 JGI fin joingreen 57,683 0 100
AC009104.10 RP11-44L9 HSCHR16_CTG3_1 JGI fin joingreen 58,331 14 99.906 simple sequence in gap
AC092114.3 CTD-2009A10 HSCHR16_CTG3_1 JGI fin joingreen 27,740 11 99.870 simple sequence in gap
AC092344.3 RP11-26P10 HSCHR16_CTG3_1 JGI fin joingreen 22,065 0 100
AC087565.5 RP11-53L24 HSCHR16_CTG3_1 JGI fin joingreen 67,257 0 100
AC092128.3 RP11-133M24 HSCHR16_CTG3_1 JGI fin joingreen 35,773 0 100
AC138627.1 RP11-42H13 HSCHR16_CTG3_1 JGI fin joingreen 14,189 0 100
AC009120.8 ? HSCHR16_CTG3_1 JGI fin joingreen 25,225 3 99.956 simple sequence in gap
   KF511230.1 ? HSCHR16_CTG3_1 CONTAINED in AC009120.8 fin joinyellow 369 1 100 alignment length < 2000
AC009053.7 RP11-252A24 HSCHR16_CTG3_1 JGI fin joingreen 88,500 0 100
AC009153.10 RP11-572F4 HSCHR16_CTG3_1 JGI fin joingreen 19,434 10 99.815 simple sequence in gap
AC109599.4 RP11-144N1 HSCHR16_CTG3_1 JGI fin joingreen 14,944 5 99.920 simple sequence in gap
AC004685.1 ? HSCHR16_CTG3_1 TIGR fin joingreen 60,635 12 99.967 simple sequence in gap
   KF456203.1 ? HSCHR16_CTG3_1 CONTAINED in AC004685.1 unk joinyellow 313 0 99.681 alignment length < 2000
AC009132.9 RP11-503F24 HSCHR16_CTG3_1 JGI fin joingreen 50,178 0 100
AC092383.4 RP11-787D11 HSCHR16_CTG3_1 JGI fin joingreen 75,364 16 99.964 simple sequence in gap
AC099508.3 RP11-252E2 HSCHR16_CTG3_1 JGI fin joingreen 69,205 0 99.999
AC009078.6 RP11-331F4 HSCHR16_CTG3_1 JGI fin joingreen 7,528 0 100
AC009054.8 RP11-252K23 HSCHR16_CTG3_1 JGI fin joingreen 41,397 15 99.913 simple sequence in gap
AC009163.6 RP11-77K12 HSCHR16_CTG3_1 JGI fin joingreen 20,036 1 100 simple sequence in gap
AC025287.8 RP11-490B18 HSCHR16_CTG3_1 JGI fin joingreen 59,643 0 100
AC009122.8 RP11-486B22 HSCHR16_CTG3_1 JGI fin joingreen 4,631 0 100
AC105430.2 RP11-2C15 HSCHR16_CTG3_1 JGI fin joingreen 20,989 0 100
AC092379.4 RP11-707E24 HSCHR16_CTG3_1 JGI fin joingreen 63,134 13 99.886 simple sequence in gap
AC099511.5 RP11-293N14 HSCHR16_CTG3_1 JGI fin joingreen 17,583 3 99.949 simple sequence in gap
AC009046.4 RP11-200H5 HSCHR16_CTG3_1 JGI fin joingreen 115,960 4 99.999 simple sequence in gap
AC010528.8 RP11-150D5 HSCHR16_CTG3_1 JGI fin joingreen 6,329 3 99.889 simple sequence in gap
   FO681478.1 PCR_RP11_AC010528_2 HSCHR16_CTG3_1 CONTAINED in AC010528.8 unk joinyellow 712 1 100 alignment length < 2000
AC106741.3 RP11-105F24 HSCHR16_CTG3_1 JGI fin joingreen 29,840 0 100
AC108125.4 RP11-58C22 HSCHR16_CTG3_1 JGI fin joingreen 40,557 3 99.988 simple sequence in gap
AC104151.5 RP11-96P7 HSCHR16_CTG3_1 JGI fin joingreen 10,055 0 100
AC130470.2 RP11-143P24 HSCHR16_CTG3_1 JGI fin joingreen 5,129 0 100
AC106729.2 CTD-2003G21 HSCHR16_CTG3_1 JGI fin joinyellow 35,458 14 99.803 >0 gap of 25bp or more, not simple sequence
AC106734.3 CTD-2336H13 HSCHR16_CTG3_1 JGI fin joingreen 14,908 2 99.933 simple sequence in gap
   KC877615.1 ? HSCHR16_CTG3_1 CONTAINED in AC106734.3 unk joinyellow 555 0 99.820 alignment length < 2000
AC108132.2 RP11-404F5 HSCHR16_CTG3_1 JGI fin joingreen 50,120 15 99.822 simple sequence in gap
   KF456208.1 ? HSCHR16_CTG3_1 CONTAINED in AC108132.2 unk joinyellow 393 0 99.746 alignment length < 2000
AC106733.3 CTD-2300H10 HSCHR16_CTG3_1 JGI fin joingreen 24,192 12 99.810 simple sequence in gap
AC009139.8 RP11-538I12 HSCHR16_CTG3_1 JGI fin joingreen 96,821 2 100 simple sequence in gap
AC010548.10 RP11-518I8 HSCHR16_CTG3_1 JGI fin joingreen 11,683 0 99.983
AC025284.4 RP11-449J10 HSCHR16_CTG3_1 JGI fin joingreen 23,975 10 99.712 simple sequence in gap
AC092724.2 RP11-571O6 HSCHR16_CTG3_1 JGI fin joingreen 41,697 0 100
   KF456211.1 ? HSCHR16_CTG3_1 CONTAINED in AC092724.2 unk joinyellow 364 0 99.725 alignment length < 2000
AC092134.4 RP11-264M12 HSCHR16_CTG3_1 JGI fin joingreen 13,728 0 100
AC010650.9 RP11-281J9 HSCHR16_CTG3_1 JGI fin joingreen 19,241 3 99.870 simple sequence in gap
AC079414.6 RP11-358L22 HSCHR16_CTG3_1 JGI fin joingreen 85,305 0 99.999
AC009044.3 RP11-190D6 HSCHR16_CTG3_1 JGI fin joingreen 24,762 0 100
AC106743.4 RP11-116D9 HSCHR16_CTG3_1 JGI fin joingreen 5,405 3 99.870 simple sequence in gap
AC109134.2 CTD-2343L8 HSCHR16_CTG3_1 JGI fin joingreen 25,662 11 99.638 simple sequence in gap
AC046158.6 RP11-264L1 HSCHR16_CTG3_1 JGI fin joingreen 2,809 1 99.786 simple sequence in gap
AC009141.7 RP11-543G23 HSCHR16_CTG3_1 JGI fin joingreen 111,164 2 100 simple sequence in gap
AC136603.3 RP11-133M8 HSCHR16_CTG3_1 JGI fin joingreen 13,827 5 99.870 simple sequence in gap
AC027279.4 RP11-319G9 HSCHR16_CTG3_1 JGI fin joingreen 48,161 30 99.691 simple sequence in gap
AC009145.4 RP11-556H2 HSCHR16_CTG3_1 JGI fin joingreen 2,519 2 99.841 simple sequence in gap
AC092376.3 RP11-679B19 HSCHR16_CTG3_1 JGI fin joingreen 7,996 0 100
AC084064.6 RP11-467I17 HSCHR16_CTG3_1 JGI fin joingreen 4,241 0 100
AC009159.12 RP11-70D24 HSCHR16_CTG3_1 JGI fin joingreen 961 0 100
AC087188.5 RP11-345M22 HSCHR16_CTG3_1 JGI fin joingreen 70,082 20 99.799 simple sequence in gap
AC113931.2 CTD-2330P21 HSCHR16_CTG3_1 JGI fin joingreen 18,412 0 99.967
AC092130.3 RP11-148M9 HSCHR16_CTG3_1 JGI fin joingreen 3,068 0 100
AC022166.7 RP11-525K10 HSCHR16_CTG3_1 JGI fin joingreen 50,712 1 100 simple sequence in gap
AC108483.3 RP11-170P24 HSCHR16_CTG3_1 JGI fin joingreen 46,288 4 99.762 simple sequence in gap
AC105411.1 RP11-354A20 HSCHR16_CTG3_1 JGI fin joingreen 32,952 0 100
AC108097.3 RP11-109P11 HSCHR16_CTG3_1 JGI fin joingreen 51,187 16 99.791 simple sequence in gap
   KF456210.1 ? HSCHR16_CTG3_1 CONTAINED in AC108097.3 unk joinyellow 378 0 99.735 alignment length < 2000
AC092332.4 RP11-18F14 HSCHR16_CTG3_1 JGI fin joingreen 41,340 5 99.944 simple sequence in gap
AC099313.3 CTD-2055G21 HSCHR16_CTG3_1 JGI fin joingreen 44,981 2 99.969 simple sequence in gap
AC009070.12 RP11-314O13 HSCHR16_CTG3_1 JGI fin joingreen 78,201 2 100
AC009079.4 RP11-340B7 HSCHR16_CTG3_1 JGI fin joinyellow 94,029 49 99.773 >0 gap of 25bp or more, not simple sequence
AC092718.3 RP11-303E16 HSCHR16_CTG3_1 JGI fin joingreen 59,053 0 100
   KF570268.1 ? HSCHR16_CTG3_1 CONTAINED in AC092718.3 unk joinyellow 392 0 99.745 alignment length < 2000
   KF459692.2 ? HSCHR16_CTG3_1 CONTAINED in AC092718.3 unk joinyellow 200 0 99.500 identity < 99.6%; alignment length < 2000
AC131888.1 RP11-626G3 HSCHR16_CTG3_1 JGI fin joingreen 2,155 0 100
AC009148.11 RP11-55K13 HSCHR16_CTG3_1 JGI fin joinyellow 90,751 35 99.819 >0 gap of 25bp or more, not simple sequence
AC092139.5 RP11-391L3 HSCHR16_CTG3_1 JGI fin joingreen 74,609 19 99.834 simple sequence in gap
AC092135.4 RP11-274A11 HSCHR16_CTG3_1 JGI fin joingreen 90,257 16 99.928 simple sequence in gap
AC099480.5 CTB-159O23 HSCHR16_CTG3_1 JGI fin joingreen 5,209 1 99.962 simple sequence in gap
AC099524.5 RP11-960L18 HSCHR16_CTG3_1 JGI fin joingreen 110,028 1 100 simple sequence in gap
AC098966.3 RP11-465H19 HSCHR16_CTG3_1 JGI fin joingreen 22,490 10 99.693 simple sequence in gap
AC092142.5 RP11-510J16 HSCHR16_CTG3_1 JGI fin joingreen 50,347 6 99.921 simple sequence in gap
   KF456213.1 ? HSCHR16_CTG3_1 CONTAINED in AC092142.5 unk joinyellow 385 0 99.740 alignment length < 2000
AC138304.1 CTD-2588J6 HSCHR16_CTG3_1 JGI fin joingreen 15,874 12 99.647 simple sequence in gap
AC024590.8 RP11-487C14 HSCHR16_CTG3_1 JGI fin joingreen 898 0 99.889
AC098803.1 CTD-2285C9 HSCHR16_CTG3_1 JGI fin joingreen 1,066 0 99.906
AC009117.8 RP11-481E4 HSCHR16_CTG3_1 JGI fin joingreen 41,319 0 99.998
AC092351.3 RP11-2L4 HSCHR16_CTG3_1 JGI fin joingreen 15,798 0 100
AC099506.3 RP11-22H5 HSCHR16_CTG3_1 JGI fin joingreen 37,528 17 99.787 simple sequence in gap
AC009028.3 RP11-131F3 HSCHR16_CTG3_1 JGI fin joingreen 69,009 9 99.887 simple sequence in gap
   KF456214.1 ? HSCHR16_CTG3_1 CONTAINED in AC009028.3 unk joinyellow 391 0 99.744 alignment length < 2000
AC125793.2 CTD-3253I12 HSCHR16_CTG3_1 JGI fin joingreen 4,914 0 99.776
   KC877613.1 ? HSCHR16_CTG3_1 CONTAINED in AC125793.2 unk joinyellow 551 0 99.819 alignment length < 2000
   KC877608.1 ? HSCHR16_CTG3_1 CONTAINED in AC125793.2 unk joinyellow 542 0 99.815 alignment length < 2000
   KC877618.1 ? HSCHR16_CTG3_1 CONTAINED in AC125793.2 unk joinyellow 546 0 99.817 alignment length < 2000
AC098804.6 RP11-244P19 HSCHR16_CTG3_1 JGI fin joinyellow 13,467 5 99.577 identity < 99.6%
AC087189.3 RP11-43L5 HSCHR16_CTG3_1 JGI fin joingreen 43,284 0 100
AC009142.13 RP11-543N12 HSCHR16_CTG3_1 JGI fin joingreen 58,220 0 100
AC092340.5 RP11-24M10 HSCHR16_CTG3_1 JGI fin joingreen 31,387 1 100 simple sequence in gap
AC106814.3 RP11-625E3 HSCHR16_CTG3_1 JGI fin joingreen 55,566 0 100
AC009063.8 RP11-298D21 HSCHR16_CTG3_1 JGI fin joingreen 12,891 0 100
AC009119.10 RP11-483P21 HSCHR16_CTG3_1 JGI fin joingreen 8,047 2 99.826 simple sequence in gap
AC040169.7 RP11-505K9 HSCHR16_CTG3_1 JGI fin joingreen 15,968 0 100
AC009123.7 RP11-486L19 HSCHR16_CTG3_1 JGI fin joingreen 88,567 39 99.754 simple sequence in gap
   KF510423.1 ? HSCHR16_CTG3_1 CONTAINED in AC009123.7 fin joinyellow 358 1 100 alignment length < 2000
AC010551.3 RP11-558A11 HSCHR16_CTG3_1 JGI fin joingreen 31,415 0 100
AC022165.9 RP11-517C16 HSCHR16_CTG3_1 JGI fin joingreen 34,133 0 100
   KF456217.1 ? HSCHR16_CTG3_1 CONTAINED in AC022165.9 unk joinyellow 382 0 99.738 alignment length < 2000
AC092145.2 RP11-61F12 HSCHR16_CTG3_1 JGI fin joingreen 20,404 2 100 simple sequence in gap
AC009116.8 RP11-477D3 HSCHR16_CTG3_1 JGI fin joingreen 34,547 17 99.835 simple sequence in gap
AC025280.5 RP11-254F19 HSCHR16_CTG3_1 JGI fin joingreen 88,808 49 99.762 simple sequence in gap
AC092341.5 RP11-260K13 HSCHR16_CTG3_1 JGI fin joingreen 73,347 0 100
AC026469.8 RP11-442O1 HSCHR16_CTG3_1 JGI fin joingreen 16,375 6 99.786 simple sequence in gap
AC092275.3 CTC-786C10 HSCHR16_CTG3_1 JGI fin joingreen 54,089 14 99.893 simple sequence in gap
   KF456216.1 ? HSCHR16_CTG3_1 CONTAINED in AC092275.3 unk joinyellow 329 0 99.696 alignment length < 2000
AC092377.3 RP11-680G10 HSCHR16_CTG3_1 JGI fin joingreen 10,869 8 99.706 simple sequence in gap
AC133540.2 LA16c-352F7 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC147772.1 16A04 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC137492.2 LA16c-379F6 HSCHR16_CTG3_1 JGI fin joingreen 25,203 9 99.810 simple sequence in gap
AC092127.3 RP11-118F19 HSCHR16_CTG3_1 JGI fin joingreen 12,443 1 99.984
AC123908.3 CTD-2542L18 HSCHR16_CTG3_1 JGI fin joingreen 78,257 49 99.790 simple sequence in gap
   KC877616.1 ? HSCHR16_CTG3_1 CONTAINED in AC123908.3 unk joinyellow 544 0 99.816 alignment length < 2000
   KC877610.1 ? HSCHR16_CTG3_1 CONTAINED in AC123908.3 unk joinyellow 511 0 99.804 alignment length < 2000
   KC877620.1 ? HSCHR16_CTG3_1 CONTAINED in AC123908.3 unk joinyellow 571 0 99.825 alignment length < 2000
   KC877623.1 ? HSCHR16_CTG3_1 CONTAINED in AC123908.3 unk joinyellow 544 0 99.816 alignment length < 2000
   KC877621.1 ? HSCHR16_CTG3_1 CONTAINED in AC123908.3 unk joinyellow 545 0 99.817 alignment length < 2000
AC018695.6 RP11-568J23 HSCHR16_CTG3_1 WUGSC fin joinpurple 18,147 7 99.708 approved certificate; >0 gap of 50bp or more, not simple sequence
   KF456215.1 ? HSCHR16_CTG3_1 CONTAINED in AC018695.6 unk joinyellow 386 0 99.741 alignment length < 2000
AC092723.3 RP11-542M13 HSCHR16_CTG3_1 JGI fin joingreen 7,654 0 100
AC135012.2 RP11-805I24 HSCHR16_CTG3_1 JGI fin joingreen 63,471 0 100
AC040170.9 RP11-514D23 HSCHR16_CTG3_1 JGI fin joingreen 79,181 0 100
AC092327.4 RP11-158I3 HSCHR16_CTG3_1 JGI fin joingreen 20,353 3 99.887 simple sequence in gap
AC125792.2 CTD-3032L3 HSCHR16_CTG3_1 JGI fin joingreen 22,388 8 99.812 simple sequence in gap
AC009108.10 RP11-463O9 HSCHR16_CTG3_1 JGI fin joingreen 23,991 0 100
AC009154.5 RP11-58A18 HSCHR16_CTG3_1 JGI fin joingreen 98,293 37 99.805 simple sequence in gap
AC130467.2 CTD-2015G9 HSCHR16_CTG3_1 JGI fin joingreen 12,783 0 99.969
   KC877619.1 ? HSCHR16_CTG3_1 CONTAINED in AC130467.2 unk joinyellow 540 0 99.815 alignment length < 2000
AC093519.3 RP11-107C10 HSCHR16_CTG3_1 JGI fin joingreen 29,771 4 99.852 simple sequence in gap
AC106745.4 RP11-134D3 HSCHR16_CTG3_1 JGI fin joingreen 80,848 0 100
AC136285.2 RP11-899L11 HSCHR16_CTG3_1 JGI fin joingreen 21,734 0 100
   KF570269.1 ? HSCHR16_CTG3_1 CONTAINED in AC136285.2 unk joinyellow 57 0 98.246 identity < 99.6%; alignment length < 2000
AC010531.8 RP11-178L8 HSCHR16_CTG3_1 JGI fin joingreen 101,297 0 100
AC105429.3 RP11-106D4 HSCHR16_CTG3_1 JGI fin joingreen 5,152 0 100
AC092720.4 RP11-482M8 HSCHR16_CTG3_1 JGI fin joinpurple 73,944 21 99.886 approved certificate; >0 gap of 50bp or more, not simple sequence
AC010536.8 RP11-278A23 HSCHR16_CTG3_1 JGI fin joingreen 7,729 2 99.974 simple sequence in gap
   KF456219.1 ? HSCHR16_CTG3_1 CONTAINED in AC010536.8 unk joinyellow 243 0 99.588 identity < 99.6%; alignment length < 2000
AC126696.1 RP4-536B24 HSCHR16_CTG3_1 JGI fin joingreen 28,959 0 100
AC133539.2 GS1-21A4 HSCHR16_CTG3_1 JGI fin joingreen 44,294 10 99.953 simple sequence in gap
AC127455.4 CTD-3057O21 HSCHR16_CTG3_1 JGI fin joinpurple 95,688 31 99.810 approved certificate; >0 gap of 500bp or more, not simple sequence
AC134312.3 RP11-863P13 HSCHR16_CTG3_1 JGI fin joingreen 74,021 0 100
AC138512.4 RP11-93B18 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 99.900
AC147773.1 16A05 HSCHR16_CTG3_1 JGI fin joingreen 1,001 0 100
AC137526.1 LA16c-444G7 HSCHR16_CTG3_1 JGI fin joinyellow 16,981 1 99.876 >0 gap of 25bp or more, not simple sequence
AC140838.3 8484069G6 HSCHR16_CTG3_1 JGI fin joinpurple 30,279 7 99.772 approved certificate; >0 gap of 50bp or more, not simple sequence
AC142208.3 89260C6 HSCHR16_CTG3_1 JGI fin joinred 24,606 24 99.870 >0 gap of 50bp or more, not simple sequence
AUXG01000151.1 ? HSCHR16_CTG3_1 None wgs joinyellow 1,644 0 99.818 alignment length < 2000
ABBA01000967.1 ? HSCHR16_CTG3_1 None wgs joingreen 5,405 3 99.704
AEKP01188814.1 ? HSCHR16_CTG3_1 None wgs joinred 90 4 93.333 identity < 98%
AUXG01000154.1 ? HSCHR16_CTG3_1 None wgs joinred 9,299 30 99.441 >0 gap of 500bp or more
AC132804.2 LA16c-336H4 HSCHR16_CTG3_1 JGI fin joinyellow 7,076 0 99.760 half-dovetail of >0bp and <=50bp
AC135049.2 RP11-142N21 HSCHR16_CTG3_1 JGI fin joingreen 27,813 0 100
   KF456226.1 ? HSCHR16_CTG3_1 CONTAINED in AC135049.2 unk joinyellow 313 0 99.681 alignment length < 2000
AC116552.2 RP11-21B21 HSCHR16_CTG3_1 JGI fin joingreen 15,574 7 99.827 simple sequence in gap
AC138028.1 RP5-1142A6 HSCHR16_CTG3_1 JGI fin joingreen 11,437 1 99.843 simple sequence in gap
   KF459804.1 ? HSCHR16_CTG3_1 CONTAINED in AC138028.1 unk joinyellow 75 0 98.667 identity < 99.6%; alignment length < 2000
AC092384.5 RP11-830F9 HSCHR16_CTG3_1 JGI fin joinyellow 19,671 4 99.893 >0 gap of 25bp or more, not simple sequence
AC135782.4 CTD-2555A7 HSCHR16_CTG3_1 JGI fin joinyellow 2,445 1 99.591 identity < 99.6%
   KC877622.1 ? HSCHR16_CTG3_1 CONTAINED in AC135782.4 unk joinyellow 476 0 99.790 alignment length < 2000
AC009113.8 RP11-46C24 HSCHR16_CTG3_1 JGI fin joingreen 8,767 5 99.795 simple sequence in gap
   KF456218.1 ? HSCHR16_CTG3_1 CONTAINED in AC009113.8 unk joinyellow 153 0 99.346 identity < 99.6%; alignment length < 2000
AC137932.1 GS2-740I5 HSCHR16_CTG3_1 JGI fin joingreen 10,952 1 100 simple sequence in gap
AC092120.4 RP1-168P16 HSCHR16_CTG3_1 JGI fin joingreen 16,645 1 99.970 simple sequence in gap
   KF456220.1 ? HSCHR16_CTG3_1 CONTAINED in AC092120.4 unk joinyellow 460 0 99.783 alignment length < 2000
AC092123.4 RP11-104N10 HSCHR16_CTG3_1 JGI fin joingreen 54,098 0 100
AC010538.9 RP11-368I7 HSCHR16_CTG3_1 JGI fin joingreen 7,120 5 99.831 simple sequence in gap
   KF459565.1 ? HSCHR16_CTG3_1 CONTAINED in AC010538.9 unk joinyellow 261 0 99.617 alignment length < 2000
AC005360.1 LA16c-352A12 HSCHR16_CTG3_1 JGI fin joingreen 9,652 0 100
AC005567.1 LA16c-431F1 HSCHR16_CTG3_1 JGI fin joingreen 4,822 1 99.896 simple sequence in gap
   KF456225.1 ? HSCHR16_CTG3_1 CONTAINED in AC005567.1 unk joinyellow 324 0 99.691 alignment length < 2000
AC092385.4 RP4-597G12 HSCHR16_CTG3_1 JGI fin joingreen 28,601 1 99.990
AC092143.4 RP11-566K11 HSCHR16_CTG3_1 JGI fin joingreen 43,907 0 100
   KF459805.1 ? HSCHR16_CTG3_1 CONTAINED in AC092143.4 unk joinyellow 357 0 99.720 alignment length < 2000
AC133919.3 RP11-356C4 HSCHR16_CTG3_1 JGI fin joingreen 9,016 1 100 simple sequence in gap
AC137933.1 YA11C11 HSCHR16_CTG3_1 JGI fin joingreen 13,224 0 100
AC137934.1 YA11C16 HSCHR16_CTG3_1 JGI fin
GAP type-3
GAP TELOMERE 10000