Alignment last updated: 01/31/2014 08:13:29

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <50 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for BX537133.3 and CU467826.22

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BX537133.3 Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete sequence [htgs_phase3]

Length: 249,791 bp

CU467826.22 Zebrafish DNA sequence from clone CH211-191D2 in linkage group 20, complete sequence [htgs_phase3]

Length: 40,455 bp

Alignment Summary

Join evaluation: yellow (half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000)

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 119393
Total Length: 178
Aligned Length: 177
Percent Identity: 98.8701
Number of Gaps: 1
Number of Mismatches: 2
First Tail: 47bp
Source: CtgOverlap Seq-Align
Valid Switchpoint: true (A)

Switch Points

Type	Point1	Point2	Orient1	Orient2	Curator	Comment	Time	Id	Alignment	Releases
A	48	179	-	+	chenhc	Taxid 7955 chrom 20 Primary assembly	2014-01-31 08:13:29.376	114412	119393	GRCz11, GRCz10

Alignment 1 of 1

 BX537133.3 : - : 224..48
 CU467826.22 : + : 1..178
 Mismatches = 2, Gaps = 1, Length = 178
 Percent identity = 98.87%
 Score = 285.5 bits (154), Expect = 1.145e-76
  0 BAC and 4 Fosmid bridging clones.
  0 BAC and 4 Fosmid concordant clones.
  0 BAC and 0 Fosmid discordant clones.

BX537133.3  <224     ttgaaaattggcaataaatgtcactgaatacagtttcagta-tttttttgtttattgcag 166    
CU467826.22 >1       .........................................t.................. 60     

BX537133.3  <165     tcctgctgattaaagcactgttgggataacacattacaagtaacgtgagttacgtaatat 106    
CU467826.22 >61      ............................................................ 120    

BX537133.3  <105     tgcttttctaagtagcaagtaatttataacttaaattaagtaataatatatcagttac 48     
CU467826.22 >121     ................t..........t.............................. 178

Events

Type

Date

Whodid

Comment

298541

InitHasAlign

01/31/2014 08:11:59

cgi_chen

find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Jan 16 2014. Toolkit wrapper  using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib
Info: Blast Including ID: 34996445
Info: Running Blast Filter: 
Warning: CBlastAligner found no hits this run.
Info: Blast Including ID: 34996445
Info: Running Blast Filter: 
Info: CBlastAligner found 15 hits.
Info: Determined ID: gi|34996445 needs Merging.
Info: Merged into 3 alignments.
Info: Blast Including ID: 34996445
Info: Running Blast Filter: 
Info: CBlastAligner found 891 hits.
Info: Determined ID: gi|34996445 needs Merging.
Info: Merged into 249 alignments.
Info: Best Rank: 7 in  for 34996445 of 1
Info:  NG returned 1 alignments

f_cron_job

298598

CreateSwitchPt

01/31/2014 08:13:29

chenhc

tpf_m_BuilderId: t Toolkit wrapper version: built Dec 11 2013 using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH211-100J11	BX537133.3	97.41%	pos 77037 (R+)	BX537133.3	98.38%	pos 235696 (F-)
CH211-108B14	BX537133.3	99.85%	pos 152295 (R+)
CH211-110D1	BX537133.3	100%	pos 142347 (R+)
CH211-114C9	CU467826.22	100%	pos 38456 (R+)
CH211-121J11	BX537133.3	99.86%	pos 236377 (R+)
CH211-135D4	BX537133.3	99.2%	pos 214374 (R+)
CH211-135D4	BX537133.3	98.74%	pos 214387 (R+)
CH211-13K11				CU467826.22	99.41%	pos 31521 (F+)
CH211-146C24	BX537133.3	97.85%	pos 213770 (R-)	BX537133.3	98.18%	pos 54780 (F+)
CH211-153M23				BX537133.3	100%	pos 222803 (F+)
CH211-159O14	BX537133.3	99.87%	pos 13394 (R+)
CH211-163K15	BX537133.3	100%	pos 235707 (R-)
CH211-191D2				BX537133.3	98.94%	pos 12626 (F-)
CH211-1M3	BX537133.3	99.85%	pos 235718 (R-)	BX537133.3	99.01%	pos 54213 (F+)
CH211-214C21				BX537133.3	99.17%	pos 210858 (F+)
CH211-220B14	BX537133.3	99.56%	pos 235687 (R-)	BX537133.3	100%	pos 40330 (F+)
CH211-231H15	BX537133.3	98.46%	pos 222087 (R-)
CH211-231H16				BX537133.3	97.53%	pos 77033 (F+)
CH211-235E17	BX537133.3	100%	pos 222048 (R-)	BX537133.3	100%	pos 68209 (F+)
CH211-235F17	BX537133.3	100%	pos 222040 (R-)	BX537133.3	99.86%	pos 68204 (F+)
CH211-24D5	BX537133.3	100%	pos 226133 (R+)
CH211-252H12	BX537133.3	99.83%	pos 183913 (R-)
CH211-256H23	BX537133.3	100%	pos 10893 (R+)
CH211-25K1	CU467826.22	100%	pos 31521 (R+)
CH211-26P20	CU467826.22	99.83%	pos 31521 (R+)
CH211-276C23	BX537133.3	100%	pos 188360 (R+)
CH211-285L19				BX537133.3	100%	pos 152327 (F+)
CH211-2H22	BX537133.3	99.85%	pos 235707 (R-)	BX537133.3	99.07%	pos 54216 (F+)
CH211-3I19	BX537133.3	100%	pos 236388 (R+)
CH211-42P4	BX537133.3	99.18%	pos 222797 (R+)
CH211-42P4	BX537133.3	98.38%	pos 222804 (R+)
CH211-49G17				BX537133.3	100%	pos 248492 (F+)
CH211-56J20				BX537133.3	100%	pos 142369 (F+)
CH211-57N13				BX537133.3	99.61%	pos 226139 (F+)
CH211-64A6	CU467826.22	99.58%	pos 2000 (R+)
CH211-70F12	BX537133.3	99.2%	pos 236370 (R+)
CH211-70P11	BX537133.3	99.47%	pos 186492 (R-)	BX537133.3	100%	pos 13376 (F+)
CH211-70P11	BX537133.3	100%	pos 186911 (R-)	BX537133.3	99.57%	pos 13383 (F+)
CH211-74C10	BX537133.3	98.36%	pos 57004 (R+)
CH211-83G16	BX537133.3	99.69%	pos 243504 (R-)	BX537133.3	99.86%	pos 77049 (F+)
CH211-83G19	BX537133.3	100%	pos 243417 (R-)	BX537133.3	100%	pos 77023 (F+)
CH73-108K6	CU467826.22	98.28%	pos 22163 (R+)
CH73-110O18	BX537133.3	100%	pos 32435 (R+)	BX537133.3	100%	pos 141623 (F-)
CH73-120O22				BX537133.3	100%	pos 223226 (F+)
CH73-133H23	BX537133.3	100%	pos 15891 (R+)	BX537133.3	99.87%	pos 115695 (F-)
CH73-140E11	BX537133.3	100%	pos 106635 (R+)	BX537133.3	100%	pos 129821 (F-)
CH73-141E4	BX537133.3	100%	pos 109003 (R-)	BX537133.3	100%	pos 11303 (F+)
CH73-147L15	BX537133.3	100%	pos 109875 (R+)	BX537133.3	100%	pos 210051 (F-)
CH73-162K19	BX537133.3	99.86%	pos 107255 (R-)	BX537133.3	100%	pos 2949 (F+)
CH73-17A21				BX537133.3	99.58%	pos 210050 (F-)
CH73-180D6	BX537133.3	100%	pos 188355 (R+)
CH73-180L2				BX537133.3	99.74%	pos 236445 (F+)
CH73-189P9	BX537133.3	100%	pos 12329 (R+)	BX537133.3	100%	pos 107211 (F-)
CH73-211N17	BX537133.3	100%	pos 13492 (R+)	BX537133.3	100%	pos 108971 (F-)
CH73-229K15				CU467826.22	98.54%	pos 21190 (F+)
CH73-235L14	BX537133.3	99.88%	pos 141504 (R-)	BX537133.3	100%	pos 32413 (F+)
CH73-24B1				BX537133.3	100%	pos 222871 (F+)
CH73-251E10	BX537133.3	98.08%	pos 179421 (R-)	BX537133.3	100%	pos 77144 (F+)
CH73-268A15	BX537133.3	100%	pos 236484 (R+)
CH73-276A13	BX537133.3	100%	pos 77136 (R+)	BX537133.3	100%	pos 176116 (F-)
CH73-310G8	BX537133.3	100%	pos 222916 (R+)
CH73-313E12	BX537133.3	100%	pos 53200 (R+)	BX537133.3	99.88%	pos 181873 (F-)
CH73-313F11	BX537133.3	100%	pos 149268 (R-)	BX537133.3	100%	pos 56760 (F+)
CH73-314O12				BX537133.3	99.86%	pos 236401 (F+)
CH73-322N6				BX537133.3	100%	pos 226249 (F+)
CH73-337G24	BX537133.3	100%	pos 116622 (R+)	BX537133.3	99.86%	pos 210052 (F-)
CH73-33M7	BX537133.3	100%	pos 68297 (R+)	BX537133.3	100%	pos 141552 (F-)
CH73-356B8				BX537133.3	100%	pos 188423 (F+)
CH73-359D8				BX537133.3	100%	pos 222872 (F+)
CH73-361P19				BX537133.3	100%	pos 77296 (F+)
CH73-371L9	BX537133.3	100%	pos 108144 (R+)	BX537133.3	99.22%	pos 210331 (F-)
CH73-383P7	BX537133.3	100%	pos 3255 (R+)	BX537133.3	100%	pos 115763 (F-)
CH73-41C7	BX537133.3	100%	pos 194482 (R+)
CH73-41D7	BX537133.3	100%	pos 15894 (R+)	BX537133.3	100%	pos 89454 (F-)
CH73-50B3	BX537133.3	100%	pos 34912 (R+)	BX537133.3	99.84%	pos 148821 (F-)
CH73-54N8	BX537133.3	99.61%	pos 109898 (R+)	BX537133.3	100%	pos 221945 (F-)
CH73-5F23	CU467826.22	98.72%	pos 1121 (R-)
CH73-67G3				CU467826.22	98.63%	pos 21296 (F+)
CH73-77B7	BX537133.3	99.59%	pos 115703 (R-)	BX537133.3	100%	pos 13494 (F+)
CH73-84E6	BX537133.3	100%	pos 179158 (R-)	BX537133.3	100%	pos 56803 (F+)
CH73-84F1	BX537133.3	100%	pos 54384 (R+)	BX537133.3	99.86%	pos 176120 (F-)
CH73-89I20	BX537133.3	100%	pos 115720 (R-)	BX537133.3	99.86%	pos 8776 (F+)
CH73-93C9	BX537133.3	100%	pos 243378 (R-)	BX537133.3	100%	pos 142422 (F+)
DKEY-100F18				BX537133.3	99.76%	pos 87447 (F+)
DKEY-145A13				BX537133.3	100%	pos 237390 (F+)
DKEY-145K3				BX537133.3	100%	pos 229419 (F-)
DKEY-168G24				BX537133.3	100%	pos 195081 (F+)
DKEY-181N16				BX537133.3	100%	pos 195080 (F+)
DKEY-183M15				BX537133.3	100%	pos 204826 (F+)
DKEY-210F23	BX537133.3	100%	pos 202841 (R-)	BX537133.3	100%	pos 43214 (F+)
DKEY-218P1	BX537133.3	99.85%	pos 234441 (R-)
DKEY-222B23	BX537133.3	100%	pos 168003 (R+)
DKEY-235E7	BX537133.3	100%	pos 35356 (R+)	BX537133.3	99.61%	pos 204198 (F-)
DKEY-239C14	BX537133.3	100%	pos 202853 (R-)
DKEY-242J12	BX537133.3	100%	pos 238148 (R-)	BX537133.3	100%	pos 70643 (F+)
DKEY-243L24				BX537133.3	100%	pos 162087 (F+)
DKEY-257A4	BX537133.3	100%	pos 87423 (R+)	BX537133.3	100%	pos 243282 (F-)
DKEY-261O15	BX537133.3	99.85%	pos 120308 (R+)
DKEY-265P3	BX537133.3	99.86%	pos 239817 (R-)	BX537133.3	100%	pos 115297 (F+)
DKEY-272H19				BX537133.3	100%	pos 195073 (F+)
DKEY-276N15	BX537133.3	99.5%	pos 149832 (R+)
DKEY-90M5	BX537133.3	100%	pos 249090 (R-)	BX537133.3	100%	pos 49 (F+)
DKEY-99B3	BX537133.3	100%	pos 91621 (R+)
DKEYP-16B18	BX537133.3	100%	pos 234166 (R+)
DKEYP-18P1	BX537133.3	99.55%	pos 64966 (R+)
DKEYP-2A5				BX537133.3	99.53%	pos 230150 (F-)
DKEYP-34E19				BX537133.3	100%	pos 65029 (F+)
DKEYP-48K4	BX537133.3	100%	pos 14628 (R+)	BX537133.3	99.85%	pos 229913 (F-)
DKEYP-63G10	BX537133.3	100%	pos 161478 (R-)
DKEYP-78G8				CU467826.22	97.9%	pos 22269 (F+)
DKEYP-7H16	BX537133.3	100%	pos 119386 (R+)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH1073-101D7	BX537133.3	100%	pos 113851 (R-)
CH1073-106A14	BX537133.3	100%	pos 77281 (R-)	BX537133.3	100%	pos 41884 (F+)
CH1073-112P21	CU467826.22	99.22%	pos 26583 (R+)
CH1073-132P16	BX537133.3	100%	pos 56224 (R-)	BX537133.3	100%	pos 24685 (F+)
CH1073-155A23	BX537133.3	100%	pos 40833 (R-)
CH1073-187F21	BX537133.3	100%	pos 108327 (R-)	BX537133.3	100%	pos 76825 (F+)
CH1073-205E16	BX537133.3	100%	pos 76788 (R-)
CH1073-210H8	BX537133.3	100%	pos 184667 (R-)	BX537133.3	100%	pos 151534 (F+)
CH1073-219H9	BX537133.3	99.84%	pos 108999 (R-)	BX537133.3	100%	pos 77147 (F+)
CH1073-219H9				BX537133.3	100%	pos 77118 (F+)
CH1073-228K10	BX537133.3	100%	pos 80239 (R+)
CH1073-233L17	BX537133.3	100%	pos 218667 (R+)
CH1073-249L1	BX537133.3	99.4%	pos 231285 (R+)
CH1073-249L1	BX537133.3	100%	pos 231484 (R+)
CH1073-250F22	BX537133.3	100%	pos 147071 (R+)
CH1073-258M18				BX537133.3	100%	pos 145073 (F-)
CH1073-269L17	BX537133.3	100%	pos 236393 (R-)	BX537133.3	100%	pos 197677 (F+)
CH1073-272P10	BX537133.3	100%	pos 184713 (R-)
CH1073-275H21	BX537133.3	100%	pos 185627 (R+)	BX537133.3	100%	pos 225110 (F-)
CH1073-278E9	BX537133.3	100%	pos 202875 (R+)	BX537133.3	100%	pos 233985 (F-)
CH1073-284K9	BX537133.3	100%	pos 158636 (R-)
CH1073-289K20				BX537133.3	100%	pos 231287 (F+)
CH1073-338K9				BX537133.3	100%	pos 246093 (F+)
CH1073-351O18	BX537133.3	100%	pos 70477 (R+)	BX537133.3	100%	pos 105937 (F-)
CH1073-354K15	BX537133.3	100%	pos 70477 (R+)	BX537133.3	100%	pos 105847 (F-)
CH1073-377J19	BX537133.3	100%	pos 85153 (R+)	BX537133.3	100%	pos 125658 (F-)
CH1073-387P22	CU467826.22	98.9%	pos 27048 (R+)
CH1073-398O6	BX537133.3	100%	pos 191541 (R+)	BX537133.3	100%	pos 231397 (F-)
CH1073-398O6				BX537133.3	100%	pos 230924 (F-)
CH1073-402K1	BX537133.3	99.57%	pos 210255 (R-)	BX537133.3	100%	pos 179384 (F+)
CH1073-409O18	BX537133.3	100%	pos 208273 (R+)	BX537133.3	100%	pos 242846 (F-)
CH1073-417H16	BX537133.3	100%	pos 248946 (R-)	BX537133.3	100%	pos 216612 (F+)
CH1073-423G1	BX537133.3	100%	pos 127383 (R-)	BX537133.3	100%	pos 90126 (F+)
CH1073-449J11	BX537133.3	100%	pos 192474 (R+)	BX537133.3	100%	pos 221126 (F-)
CH1073-453A19	BX537133.3	100%	pos 14111 (R+)	BX537133.3	100%	pos 51046 (F-)
CH1073-457A24				BX537133.3	99.78%	pos 220890 (F-)
CH1073-459H12	BX537133.3	100%	pos 58160 (R+)
CH1073-490A15	BX537133.3	99.59%	pos 182744 (R-)
CH1073-495A3	BX537133.3	99.73%	pos 244432 (R-)	BX537133.3	100%	pos 220969 (F+)
CH1073-502N24				BX537133.3	99.8%	pos 220546 (F-)
CH1073-50A8	BX537133.3	99.79%	pos 184474 (R+)
CH1073-511G12				CU467826.22	100%	pos 29108 (F+)
CH1073-511P13	BX537133.3	100%	pos 180203 (R+)	BX537133.3	100%	pos 211541 (F-)
CH1073-519J4				BX537133.3	100%	pos 220458 (F-)
CH1073-524L17				BX537133.3	100%	pos 102446 (F+)
CH1073-525K23	BX537133.3	100%	pos 230262 (R-)	BX537133.3	100%	pos 199589 (F+)
CH1073-532E11				CU467826.22	99.87%	pos 5013 (F-)
CH1073-534P6				BX537133.3	100%	pos 239746 (F+)
CH1073-556E8	BX537133.3	99.85%	pos 244329 (R-)	BX537133.3	100%	pos 221188 (F+)
CH1073-582M14	BX537133.3	100%	pos 207290 (R-)	BX537133.3	100%	pos 174288 (F+)
CH1073-600F20	BX537133.3	100%	pos 207454 (R-)	BX537133.3	100%	pos 174288 (F+)
CH1073-618J7	BX537133.3	100%	pos 247022 (R+)
CH1073-619G7	BX537133.3	100%	pos 170786 (R-)	BX537133.3	100%	pos 139710 (F+)
CH1073-622P17	BX537133.3	100%	pos 138806 (R-)	BX537133.3	100%	pos 104901 (F+)
CH1073-631L19	BX537133.3	100%	pos 84948 (R-)
CH1073-633H7				BX537133.3	100%	pos 102321 (F-)
CH1073-660K5	BX537133.3	100%	pos 200473 (R+)	BX537133.3	100%	pos 233022 (F-)
CH1073-668N1	BX537133.3	99.54%	pos 161294 (R-)
CH1073-692L6	BX537133.3	100%	pos 178497 (R-)	BX537133.3	99.43%	pos 145444 (F+)
CH1073-701J9	BX537133.3	99.58%	pos 67904 (R+)	BX537133.3	100%	pos 99466 (F-)
CH1073-706J1	BX537133.3	100%	pos 105929 (R+)
CH1073-710B12	BX537133.3	100%	pos 148191 (R+)	BX537133.3	100%	pos 185393 (F-)
CH1073-72O7	BX537133.3	100%	pos 232969 (R-)	BX537133.3	100%	pos 198347 (F+)
CH1073-760B2				CU467826.22	100%	pos 15459 (F-)
CH1073-760J20	BX537133.3	100%	pos 23915 (R+)	BX537133.3	100%	pos 55862 (F-)
CH1073-781E17				BX537133.3	100%	pos 148494 (F+)
CH1073-818D5	BX537133.3	100%	pos 239518 (R-)
CH1073-865P18				BX537133.3	100%	pos 140074 (F-)
CH1073-879J23	BX537133.3	100%	pos 143244 (R-)	BX537133.3	100%	pos 104901 (F+)
CH1073-8C16	BX537133.3	100%	pos 85314 (R-)
CH1073-8F6	BX537133.3	100%	pos 158504 (R+)	BX537133.3	99.68%	pos 188357 (F-)
CH1073-8H9	BX537133.3	100%	pos 103735 (R+)
CH1073-930J3	CU467826.22	99%	pos 9843 (R-)	BX537133.3	100%	pos 24735 (F-)
CH1073-932A24				BX537133.3	99.83%	pos 36360 (F+)
CH1073-9C16	BX537133.3	100%	pos 85602 (R-)
CH1073-9H2	BX537133.3	100%	pos 223531 (R+)	BX537133.3	100%	pos 223572 (F+)
ZFOS-1047C10				BX537133.3	100%	pos 233177 (F+)
ZFOS-1083D8	BX537133.3	100%	pos 57848 (R-)	BX537133.3	100%	pos 21426 (F+)
ZFOS-1151A11	BX537133.3	100%	pos 172256 (R+)	BX537133.3	100%	pos 214289 (F-)
ZFOS-1152A3				BX537133.3	100%	pos 216855 (F+)
ZFOS-1246B6	BX537133.3	100%	pos 66748 (R+)	BX537133.3	99.76%	pos 105964 (F-)
ZFOS-1509C3	BX537133.3	100%	pos 106135 (R+)	BX537133.3	99.85%	pos 149693 (F-)
ZFOS-1512C1	BX537133.3	99.87%	pos 236289 (R+)
ZFOS-1526A4				BX537133.3	100%	pos 127024 (F-)
ZFOS-1532E7	BX537133.3	100%	pos 105344 (R-)	BX537133.3	100%	pos 62995 (F+)
ZFOS-1536C7				BX537133.3	100%	pos 75773 (F+)
ZFOS-156A5				CU467826.22	99.08%	pos 23044 (F+)
ZFOS-1578C5	BX537133.3	100%	pos 96872 (R+)
ZFOS-1578C6				BX537133.3	100%	pos 138559 (F-)
ZFOS-1621G6	BX537133.3	97.69%	pos 238885 (R+)
ZFOS-1698E8	BX537133.3	97.79%	pos 238921 (R+)
ZFOS-1738G1	BX537133.3	100%	pos 239568 (R-)	BX537133.3	99.87%	pos 200769 (F+)
ZFOS-1781G8	BX537133.3	100%	pos 223965 (R+)
ZFOS-1795E4	BX537133.3	100%	pos 29555 (R-)	CU467826.22	99.87%	pos 8537 (F-)
ZFOS-1804E9	CU467826.22	99.87%	pos 8536 (R-)	BX537133.3	100%	pos 26084 (F-)
ZFOS-1814E9				CU467826.22	100%	pos 26461 (F+)
ZFOS-1833B2	BX537133.3	99.06%	pos 47228 (R+)	BX537133.3	99.26%	pos 90979 (F-)
ZFOS-1873F1	BX537133.3	98.6%	pos 47185 (R+)
ZFOS-2036C11	BX537133.3	100%	pos 1209 (R+)	BX537133.3	100%	pos 42457 (F-)
ZFOS-2050F4	BX537133.3	99.36%	pos 208453 (R-)	BX537133.3	100%	pos 168807 (F+)
ZFOS-2109E2	BX537133.3	100%	pos 115729 (R-)	BX537133.3	100%	pos 77774 (F+)
ZFOS-2122H6	BX537133.3	100%	pos 144268 (R-)	BX537133.3	100%	pos 100518 (F+)
ZFOS-2131G10	BX537133.3	100%	pos 113700 (R+)	BX537133.3	100%	pos 157185 (F-)
ZFOS-2134H9	BX537133.3	98.01%	pos 234674 (R+)
ZFOS-215D6	BX537133.3	100%	pos 185515 (R+)
ZFOS-2167A6	BX537133.3	98.75%	pos 160392 (R+)	BX537133.3	98.05%	pos 198299 (F-)
ZFOS-2222C11				BX537133.3	98.7%	pos 143589 (F-)
ZFOS-2369E11	BX537133.3	100%	pos 230421 (R+)
ZFOS-2515H6	BX537133.3	98.42%	pos 238169 (R-)	BX537133.3	99.49%	pos 200512 (F+)
ZFOS-2564B9	BX537133.3	97.93%	pos 224112 (R+)
ZFOS-2817A7				BX537133.3	98.33%	pos 224895 (F+)
ZFOS-430E2	BX537133.3	100%	pos 1683 (R+)	BX537133.3	99.87%	pos 42000 (F-)
ZFOS-455A8	BX537133.3	98.82%	pos 70220 (R-)
ZFOS-473A9	BX537133.3	100%	pos 183968 (R+)	BX537133.3	100%	pos 223126 (F-)
ZFOS-486A11	BX537133.3	99.85%	pos 246884 (R-)	BX537133.3	100%	pos 203691 (F+)
ZFOS-649B10				BX537133.3	100%	pos 227422 (F+)
ZFOS-774B4				BX537133.3	100%	pos 216858 (F+)
ZFOS-777A12	BX537133.3	100%	pos 117832 (R-)	BX537133.3	99.89%	pos 75733 (F+)
ZFOS-789A7	CU467826.22	98.51%	pos 2341 (R-)
ZFOS-821H4	CU467826.22	99.2%	pos 801 (R-)	BX537133.3	99.83%	pos 41887 (F-)
ZFOS-830E8				BX537133.3	99.87%	pos 55040 (F+)
ZFOS-864C11	BX537133.3	100%	pos 43240 (R+)	BX537133.3	100%	pos 81480 (F-)
ZFOS-885H11	BX537133.3	99.88%	pos 233885 (R+)
ZFOS-88F5	BX537133.3	100%	pos 212222 (R-)
ZFOS-978B12	BX537133.3	99.74%	pos 185568 (R+)	BX537133.3	100%	pos 223193 (F-)

Repeats

Too repeats, not showing repeat table.

Join Legend

Curator Links

Alignment for BX537133.3 and CU467826.22

Alignment Summary

Alignment 1 of 1