Alignment last updated: 07/09/2010 12:50:38

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <50 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for BX255911.8 and BX511069.14

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BX255911.8 Zebrafish DNA sequence from clone DKEY-274C14 in linkage group 20, complete sequence [htgs_phase3]

Length: 206,480 bp

BX511069.14 Zebrafish DNA sequence from clone CH211-207I1 in linkage group 20, complete sequence [htgs_phase3]

Length: 89,721 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 86785
Total Length: 2000
Aligned Length: 2000
Percent Identity: 100
Number of Gaps: 0
Number of Mismatches: 0
Source: CtgOverlap Seq-Align
Valid Switchpoint: true (A)

Switch Points

Type	Point1	Point2	Orient1	Orient2	Curator	Comment	Time	Id	Alignment	Releases
A	206480	2001	+	+	chenhc	Taxid 7955 chrom 20 Primary assembly	2010-07-09 12:50:38.363	85252	86785	GRCz11, GRCz10

Alignment 1 of 1

 BX255911.8 : + : 204481..206480
 BX511069.14 : + : 1..2000
 Mismatches = 0, Gaps = 0, Length = 2000
 Percent identity = 100%
 Score = 3965 bits (2000), Expect = 0
  11 BAC and 13 Fosmid bridging clones.
  11 BAC and 13 Fosmid concordant clones.
  0 BAC and 0 Fosmid discordant clones.

BX255911.8  >204481  cacgtctgttgccgttgatttctcacaatgtgttgattgtgcagtttctactgcacctga 204540 
BX511069.14 >1       ............................................................ 60     

BX255911.8  >204541  gaccaaactgtctgtgccttcggtaggtgcacctctacaatgtgagatgctaactgtctt 204600 
BX511069.14 >61      ............................................................ 120    

BX255911.8  >204601  aaactgtccatcttttgcagtcaaggtctcctgcacagtgtgtgttagattgttttctgt 204660 
BX511069.14 >121     ............................................................ 180    

BX255911.8  >204661  actctttgattgactacaggttgaagacacattcagtaaagtatcagtagtgaccggcac 204720 
BX511069.14 >181     ............................................................ 240    

BX255911.8  >204721  tgtgacttcagaaaatgtaatgctgtctgaatcatctgtgtttttatgtttagatctaga 204780 
BX511069.14 >241     ............................................................ 300    

BX255911.8  >204781  tgcttttattttccttctgctgattttgtcagatttttctatatcagccaatctaataat 204840 
BX511069.14 >301     ............................................................ 360    

BX255911.8  >204841  cttctttgtatcttcaccaccatttggaggattctgaagtgcatttgcttcatttgagga 204900 
BX511069.14 >361     ............................................................ 420    

BX255911.8  >204901  ctctgcagatgtgtgtttatcagacattgtgactccctgcttaagtgctttaatccctga 204960 
BX511069.14 >421     ............................................................ 480    

BX255911.8  >204961  ttcattgtcttcagcacgggtattcatttggcatgatgtttcagtatcagtgactttatg 205020 
BX511069.14 >481     ............................................................ 540    

BX255911.8  >205021  ctgcgtctctatactgctgatattgtctgatttctctgcacaagctgatttcttgatctt 205080 
BX511069.14 >541     ............................................................ 600    

BX255911.8  >205081  tttcttaactttaccaacatttggaggattctgaagtgtgttagcttcatttgagggttc 205140 
BX511069.14 >601     ............................................................ 660    

BX255911.8  >205141  tgcaaatgtgtctttgtctgacattgtgacattctgcttaagtgttttaatccctgattc 205200 
BX511069.14 >661     ............................................................ 720    

BX255911.8  >205201  attatcttcagcacaggcgcacatttggcttaatgtgtcagtatcaatgacttcatgctg 205260 
BX511069.14 >721     ............................................................ 780    

BX255911.8  >205261  cttctctttttcaatgtcagtctccatgatctcagaagtgttgatctggagagcttccag 205320 
BX511069.14 >781     ............................................................ 840    

BX255911.8  >205321  tatttcagatctacttggtttcacaatgtccttttctaaaagaaatctttcatgctcttg 205380 
BX511069.14 >841     ............................................................ 900    

BX255911.8  >205381  ttcttcaggtttctctgtgccagcagagctcctctgttgagttttggtatctttatgggc 205440 
BX511069.14 >901     ............................................................ 960    

BX255911.8  >205441  aaatacatctgctcttgtgtctttataatctgtacattgtgtctgcaacagtggctgatg 205500 
BX511069.14 >961     ............................................................ 1020   

BX255911.8  >205501  actgaacgttggagatttaacattcacaacgacagcaggaatctgtgtaataccttcagc 205560 
BX511069.14 >1021    ............................................................ 1080   

BX255911.8  >205561  tctcatgactggtaatgcatctgctgccattgatttctctgtgtgttttgactgcacaat 205620 
BX511069.14 >1081    ............................................................ 1140   

BX255911.8  >205621  gtctgctgtttctaaaccaatgtctgtggcttcaataggagcacctccgacaactgaaac 205680 
BX511069.14 >1141    ............................................................ 1200   

BX255911.8  >205681  tgcaacagtaccaaaaagaccatgctttgcctcagtctgcaggagatttaacccatcttc 205740 
BX511069.14 >1201    ............................................................ 1260   

BX255911.8  >205741  ttgcacagtgcccacagcttctgtgtgtttgtcttcagtcctctttgactgactacaggt 205800 
BX511069.14 >1261    ............................................................ 1320   

BX255911.8  >205801  tgaagccacattcagtgaagtatctgtagtgtccggtactttcatctcagaagtttgaag 205860 
BX511069.14 >1321    ............................................................ 1380   

BX255911.8  >205861  actttctaactcagctttggttttatgttcagatgtggaagccttcagctttaaactact 205920 
BX511069.14 >1381    ............................................................ 1440   

BX255911.8  >205921  gatattgtcttttttcactgcatcaactgatttcttgatctttttcctacctttagcaac 205980 
BX511069.14 >1441    ............................................................ 1500   

BX255911.8  >205981  atttggaggtttttgaagtgcgtttgcatcatttgagggttctgcaaatgtgtgtttgtc 206040 
BX511069.14 >1501    ............................................................ 1560   

BX255911.8  >206041  tgacattgtgacatcctgcttaagtgttttgatccctgattcattgtcttcagcacaggc 206100 
BX511069.14 >1561    ............................................................ 1620   

BX255911.8  >206101  gcctatttgacttgatgtttcagcatcagtgactttgtgctgcttctctttgtcacgttt 206160 
BX511069.14 >1621    ............................................................ 1680   

BX255911.8  >206161  ttcaatgtcagtctccatgatctcagaggtgttgggctggagagcttcctgtaatacaga 206220 
BX511069.14 >1681    ............................................................ 1740   

BX255911.8  >206221  gctaagtgatttcacattgtatttctttgaaagcaatctttcaggctcttgttcttcagg 206280 
BX511069.14 >1741    ............................................................ 1800   

BX255911.8  >206281  ttccactgtgccagcagagctcctctgttgagttttggcatctttataggcaaattcttt 206340 
BX511069.14 >1801    ............................................................ 1860   

BX255911.8  >206341  tgtttttgagtctttaagacctgtgtgttgtgtctgcaacagtgactgatgactgtctga 206400 
BX511069.14 >1861    ............................................................ 1920   

BX255911.8  >206401  caacaatgttgttgaattaacatctacaatggcagcaggaatctgtgtaatacattcagc 206460 
BX511069.14 >1921    ............................................................ 1980   

BX255911.8  >206461  tctcataactggtgaagctt 206480 
BX511069.14 >1981    .................... 2000

Events

Type

Date

Whodid

Comment

206516

InitHasAlign

04/08/2010 05:24:52

boukn

find_overlap 1.33 built Aug  5 2009. Toolkit wrapper  using /netopt/ncbi_tools64/c++.by-date/20090802/GCC401-Release64/lib
Running blast for 33695235 and 47824854
Filtering on 0.985%, slop 10bp, min length 50bp and strands Unknown, Unknown
Found 1 acceptable dovetail alignment(s) by blast  -W 28 -r 1 -q -3 -G 5 -E 2 -e 1e-05 -Z 200 -F 'm L;m'

tpf_solo for chr20

218565

CreateSwitchPt

07/09/2010 12:50:38

chenhc

tpf_m_Builder 1.43 Toolkit wrapper version: built Jun  7 2010 using /netopt/ncbi_tools64/c++.by-date/20100606/GCC401-Release64/lib

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH211-104G4				BX255911.8	100%	pos 58885 (F-)
CH211-104G4				BX255911.8	100%	pos 58913 (F-)
CH211-109C10				BX255911.8	100%	pos 70983 (F-)
CH211-111G3				BX511069.14	99.83%	pos 61653 (F+)
CH211-112G14	BX511069.14	99.86%	pos 38827 (R-)	BX255911.8	99.18%	pos 71444 (F+)
CH211-11P1	BX255911.8	100%	pos 97253 (R-)
CH211-135F8	BX255911.8	100%	pos 12714 (R-)
CH211-135F8	BX255911.8	100%	pos 12878 (R-)
CH211-13I4				BX255911.8	100%	pos 94219 (F-)
CH211-141L17				BX255911.8	98.92%	pos 35731 (F-)
CH211-148C16				BX255911.8	100%	pos 12737 (F-)
CH211-151E24	BX511069.14	100%	pos 23091 (R+)
CH211-156P20	BX255911.8	100%	pos 81258 (R-)
CH211-162N2	BX255911.8	100%	pos 127745 (R-)	BX255911.8	100%	pos 97801 (F+)
CH211-173M13				BX255911.8	99.87%	pos 12741 (F-)
CH211-178L4	BX511069.14	100%	pos 23091 (R+)
CH211-18D23	BX255911.8	100%	pos 12824 (R-)
CH211-192O2				BX255911.8	100%	pos 60642 (F-)
CH211-198L23	BX511069.14	100%	pos 22446 (R-)	BX255911.8	100%	pos 36361 (F+)
CH211-199P22				BX511069.14	98.75%	pos 48566 (F-)
CH211-203H1	BX511069.14	100%	pos 23091 (R+)
CH211-206A8				BX255911.8	99.67%	pos 56699 (F-)
CH211-207I1				BX255911.8	99.26%	pos 114234 (F+)
CH211-214M20				BX255911.8	99.84%	pos 156073 (F-)
CH211-221N21	BX255911.8	100%	pos 60667 (R-)
CH211-223N9				BX511069.14	100%	pos 82241 (F+)
CH211-225H16				BX255911.8	100%	pos 111266 (F-)
CH211-238A15				BX255911.8	100%	pos 136517 (F-)
CH211-238B15				BX255911.8	100%	pos 136405 (F-)
CH211-241B22	BX511069.14	99.86%	pos 86993 (R-)	BX255911.8	99.87%	pos 131850 (F+)
CH211-254L6				BX255911.8	99.72%	pos 58940 (F-)
CH211-256I2	BX255911.8	100%	pos 59410 (R-)
CH211-25E14	BX255911.8	99.84%	pos 156075 (R-)
CH211-262E6	BX255911.8	100%	pos 86189 (R+)	BX255911.8	100%	pos 155906 (F-)
CH211-271G17				BX511069.14	100%	pos 61663 (F+)
CH211-281B13				BX255911.8	100%	pos 105230 (F-)
CH211-281C14				BX255911.8	98.48%	pos 105630 (F-)
CH211-281D11	BX255911.8	100%	pos 128390 (R+)
CH211-281D12				BX255911.8	100%	pos 147107 (F-)
CH211-283M4	BX255911.8	100%	pos 93971 (R-)
CH211-288N15				BX255911.8	98.56%	pos 58935 (F-)
CH211-31A17				BX255911.8	100%	pos 127825 (F-)
CH211-44O4				BX511069.14	99.84%	pos 61657 (F+)
CH211-46C18	BX255911.8	99.85%	pos 56945 (R-)
CH211-59I3	BX255911.8	100%	pos 163371 (R-)
CH211-64B3	BX511069.14	100%	pos 81706 (R-)	BX255911.8	100%	pos 97795 (F+)
	BX511069.14	100%	pos 81588 (R-)	BX255911.8	99.09%	pos 97795 (F+)
	BX511069.14	100%	pos 81752 (R-)
CH211-87I20				BX511069.14	99.84%	pos 87728 (F+)
CH73-140F2	BX255911.8	99.88%	pos 57693 (R+)	BX255911.8	100%	pos 156406 (F-)
CH73-148M7				BX511069.14	100%	pos 62102 (F+)
CH73-156C22	BX255911.8	100%	pos 70876 (R-)
CH73-163L12				BX511069.14	99.83%	pos 63409 (F+)
CH73-176M23	BX511069.14	99.44%	pos 2788 (R+)
CH73-194O12	BX255911.8	100%	pos 57076 (R-)
CH73-197O7	BX255911.8	100%	pos 71566 (R+)	BX255911.8	99.87%	pos 163055 (F-)
CH73-1F3	BX255911.8	100%	pos 112017 (R+)	BX255911.8	99.7%	pos 150724 (F-)
CH73-1F3	BX255911.8	100%	pos 112319 (R+)	BX255911.8	100%	pos 150562 (F-)
CH73-203C14	BX511069.14	100%	pos 22967 (R+)
CH73-20G24				BX255911.8	100%	pos 93999 (F-)
CH73-215M24				BX255911.8	100%	pos 58827 (F-)
CH73-223M14				BX255911.8	100%	pos 97374 (F-)
CH73-232I9				BX511069.14	99.82%	pos 2925 (F+)
CH73-252J24	BX511069.14	100%	pos 22040 (R-)	BX255911.8	99.02%	pos 128793 (F+)
CH73-254E13	BX255911.8	100%	pos 131966 (R+)	BX511069.14	100%	pos 38771 (F-)
CH73-257O21	BX255911.8	100%	pos 13697 (R+)
CH73-267H24	BX255911.8	100%	pos 163034 (R-)	BX255911.8	99.73%	pos 59729 (F+)
CH73-26P18	BX255911.8	100%	pos 200249 (R+)	BX511069.14	100%	pos 72641 (F-)
CH73-27M19	BX255911.8	100%	pos 56479 (R-)
CH73-29J9	BX511069.14	100%	pos 48806 (R+)
CH73-307F4	BX255911.8	100%	pos 97476 (R-)
CH73-309F18	BX511069.14	100%	pos 87796 (R+)
CH73-309F20	BX511069.14	100%	pos 87796 (R+)
CH73-310L3				BX255911.8	99.86%	pos 12669 (F-)
CH73-351F19				BX255911.8	98.97%	pos 97489 (F-)
CH73-354K24				BX255911.8	100%	pos 58886 (F-)
CH73-371H8	BX255911.8	100%	pos 70602 (R-)
CH73-381H11	BX255911.8	100%	pos 147121 (R-)	BX255911.8	100%	pos 36432 (F+)
CH73-389K17	BX255911.8	99.86%	pos 56824 (R-)
CH73-38C5	BX255911.8	100%	pos 52827 (R+)	BX255911.8	99.69%	pos 128025 (F-)
CH73-41C3				BX255911.8	98.73%	pos 58953 (F-)
CH73-45H7	BX255911.8	100%	pos 58853 (R-)
CH73-50H20				BX255911.8	100%	pos 56824 (F-)
CH73-61K9	BX511069.14	100%	pos 87794 (R+)
CH73-63K16	BX255911.8	100%	pos 67497 (R-)
CH73-72J6	BX511069.14	100%	pos 1870 (R-)	BX255911.8	99.86%	pos 112026 (F+)
CH73-72P16	BX511069.14	100%	pos 1918 (R-)	BX255911.8	99.85%	pos 112026 (F+)
CH73-76C7				BX511069.14	99.87%	pos 2793 (F+)
CH73-84O22				BX511069.14	100%	pos 61768 (F+)
CH73-92N6	BX255911.8	100%	pos 58782 (R-)
CH73-97E10				BX255911.8	100%	pos 12691 (F-)
DKEY-145H2				BX511069.14	99.8%	pos 56798 (F+)
DKEY-160K2	BX511069.14	100%	pos 36990 (R+)
DKEY-169I1				BX255911.8	100%	pos 203374 (F+)
DKEY-170C10	BX511069.14	100%	pos 85836 (R+)
DKEY-180A1				BX511069.14	100%	pos 56798 (F+)
DKEY-180L11				BX255911.8	99.87%	pos 149562 (F+)
DKEY-196F14	BX255911.8	100%	pos 34478 (R-)
DKEY-197M8	BX255911.8	100%	pos 5802 (R+)	BX255911.8	100%	pos 190712 (F-)
DKEY-206C15	BX255911.8	100%	pos 67561 (R-)
DKEY-209J4	BX511069.14	100%	pos 37000 (R+)
DKEY-215N7	BX255911.8	100%	pos 149891 (R-)
DKEY-226I20				BX511069.14	100%	pos 18365 (F+)
DKEY-233H20				BX255911.8	99.56%	pos 162499 (F-)
DKEY-235G19				BX255911.8	99.86%	pos 48162 (F-)
DKEY-238I16				BX255911.8	98.26%	pos 40836 (F-)
DKEY-244A8	BX255911.8	99.7%	pos 72450 (R-)
DKEY-255K4	BX255911.8	98.82%	pos 202000 (R+)
DKEY-255O7				BX255911.8	100%	pos 82130 (F-)
DKEY-256B10				BX255911.8	100%	pos 3240 (F-)
DKEY-258D18	BX255911.8	100%	pos 67402 (R-)
DKEY-268N16	BX255911.8	100%	pos 82902 (R+)	BX255911.8	100%	pos 154192 (F-)
DKEY-274C14	BX255911.8	100%	pos 22 (R+)	BX511069.14	100%	pos 1393 (F-)
DKEY-274C14				BX255911.8	100%	pos 205873 (F-)
DKEY-277E12				BX255911.8	100%	pos 103395 (F-)
DKEY-283K23				BX255911.8	100%	pos 5820 (F+)
DKEY-285F17	BX255911.8	100%	pos 106272 (R-)
DKEY-57G1				BX255911.8	100%	pos 112579 (F+)
DKEY-73A7				BX511069.14	100%	pos 63754 (F+)
DKEY-77H5				BX255911.8	100%	pos 70598 (F-)
DKEY-90J11	BX511069.14	99.84%	pos 42180 (R-)	BX255911.8	99.85%	pos 104951 (F+)
DKEY-96G22	BX255911.8	100%	pos 159055 (R-)
DKEYP-14K2				BX255911.8	100%	pos 128156 (F-)
DKEYP-21K11				BX255911.8	97.67%	pos 114446 (F-)
DKEYP-22I13	BX255911.8	99.71%	pos 162711 (R-)
DKEYP-24M15	BX255911.8	98.63%	pos 177449 (R-)
DKEYP-40E17				BX511069.14	100%	pos 38054 (F+)
DKEYP-42D4				BX511069.14	100%	pos 70574 (F+)
DKEYP-44D21				BX255911.8	100%	pos 98288 (F-)
RP71-1K4	BX255911.8	100%	pos 105436 (R-)	BX255911.8	99.22%	pos 82058 (F+)
RP71-86I8				BX255911.8	99.84%	pos 57014 (F-)
RP71-87C2	BX511069.14	100%	pos 61655 (R+)
RP71-87M20	BX511069.14	100%	pos 61655 (R+)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH1073-106H12	BX255911.8	99.87%	pos 17382 (R+)	BX255911.8	100%	pos 56252 (F-)
CH1073-111I14				BX511069.14	100%	pos 45560 (F+)
CH1073-111I14				BX511069.14	100%	pos 50997 (F+)
CH1073-130M14	BX255911.8	100%	pos 149987 (R-)	BX255911.8	100%	pos 107237 (F+)
CH1073-136A15				BX255911.8	100%	pos 24831 (F-)
CH1073-136A16				BX255911.8	99.17%	pos 25416 (F-)
CH1073-203K7	BX255911.8	99.74%	pos 97864 (R-)	BX255911.8	100%	pos 60332 (F+)
CH1073-213L23	BX255911.8	99.74%	pos 37407 (R-)	BX255911.8	99.85%	pos 4173 (F+)
CH1073-214F1	BX255911.8	100%	pos 37740 (R-)
CH1073-217K23				BX511069.14	100%	pos 51094 (F+)
CH1073-217K23				BX511069.14	100%	pos 45657 (F+)
CH1073-223L4	BX255911.8	100%	pos 49542 (R-)	BX255911.8	100%	pos 13353 (F+)
CH1073-255H22	BX255911.8	100%	pos 205011 (R+)	BX511069.14	100%	pos 30701 (F-)
CH1073-255H22	BX511069.14	100%	pos 531 (R+)
CH1073-26D16	BX511069.14	100%	pos 79428 (R+)	BX511069.14	100%	pos 79331 (F+)
CH1073-270O15				BX255911.8	99.72%	pos 202878 (F-)
CH1073-30P18	BX255911.8	100%	pos 123097 (R+)
CH1073-349K3	BX255911.8	100%	pos 179422 (R-)	BX255911.8	100%	pos 144494 (F+)
CH1073-351L19				BX511069.14	100%	pos 64350 (F+)
CH1073-374B22	BX255911.8	100%	pos 92952 (R-)
CH1073-417G17	BX255911.8	100%	pos 34362 (R+)	BX255911.8	100%	pos 68493 (F-)
CH1073-420K24				BX511069.14	100%	pos 75026 (F+)
CH1073-426B11	BX255911.8	100%	pos 110254 (R-)
CH1073-433K15	BX511069.14	100%	pos 48773 (R-)
CH1073-449G20	BX511069.14	100%	pos 83736 (R+)
CH1073-452A13	BX255911.8	100%	pos 92888 (R+)	BX255911.8	100%	pos 131371 (F-)
CH1073-456N18	BX255911.8	100%	pos 121382 (R+)
CH1073-456P18				BX255911.8	100%	pos 164362 (F-)
CH1073-457K7	BX511069.14	100%	pos 31163 (R-)	BX255911.8	100%	pos 195291 (F+)
CH1073-459F24	BX511069.14	100%	pos 47948 (R+)
CH1073-45I20	BX255911.8	98.68%	pos 131255 (R+)	BX255911.8	100%	pos 160210 (F-)
CH1073-461L12	BX511069.14	100%	pos 47959 (R+)
CH1073-462M13	BX255911.8	100%	pos 92930 (R+)	BX255911.8	100%	pos 131372 (F-)
CH1073-462M13	BX255911.8	100%	pos 92888 (R+)
CH1073-465N9				BX255911.8	100%	pos 14586 (F-)
CH1073-475F14				BX255911.8	100%	pos 89191 (F+)
CH1073-475G14				BX255911.8	100%	pos 89191 (F+)
CH1073-508J12	BX511069.14	100%	pos 34815 (R-)	BX511069.14	100%	pos 2632 (F+)
CH1073-511O24				BX255911.8	100%	pos 67819 (F+)
CH1073-532A11	BX255911.8	100%	pos 100848 (R-)	BX255911.8	100%	pos 67090 (F+)
CH1073-546A22	BX255911.8	100%	pos 72571 (R+)
CH1073-546C20	BX255911.8	100%	pos 72421 (R+)
CH1073-546K12				BX511069.14	100%	pos 49611 (F+)
CH1073-54A21	BX255911.8	100%	pos 171629 (R-)	BX255911.8	100%	pos 171709 (F-)
CH1073-552L2	BX255911.8	100%	pos 97724 (R+)	BX255911.8	100%	pos 132473 (F-)
CH1073-55A21	BX255911.8	99.58%	pos 135422 (R+)	BX255911.8	99.67%	pos 171738 (F-)
CH1073-573A20	BX511069.14	100%	pos 29787 (R-)	BX255911.8	100%	pos 201495 (F+)
CH1073-596O18	BX255911.8	100%	pos 203940 (R+)	BX511069.14	100%	pos 33391 (F-)
CH1073-609A10				BX511069.14	100%	pos 49611 (F+)
CH1073-613C19	BX255911.8	100%	pos 71309 (R+)	BX255911.8	100%	pos 102706 (F-)
CH1073-614B14	BX255911.8	100%	pos 14345 (R-)
CH1073-617A18	BX255911.8	100%	pos 15557 (R+)
CH1073-637B10				BX511069.14	100%	pos 44327 (F-)
CH1073-652P14	BX511069.14	99.79%	pos 20903 (R-)	BX511069.14	99.86%	pos 15366 (F+)
CH1073-658K11				BX511069.14	100%	pos 27806 (F+)
CH1073-668I15				BX255911.8	99.31%	pos 68005 (F+)
CH1073-675K8	BX255911.8	100%	pos 39694 (R-)	BX255911.8	100%	pos 3581 (F+)
CH1073-688G24				BX511069.14	100%	pos 83077 (F+)
CH1073-689N21				BX255911.8	100%	pos 8339 (F-)
CH1073-68G3	BX255911.8	100%	pos 84635 (R-)	BX255911.8	100%	pos 49565 (F+)
CH1073-704A9				BX255911.8	100%	pos 175570 (F-)
CH1073-734A18	BX511069.14	100%	pos 74293 (R-)
CH1073-763B12	BX255911.8	99.15%	pos 88055 (R-)	BX255911.8	100%	pos 55292 (F+)
CH1073-797J11	BX511069.14	100%	pos 10555 (R+)	BX511069.14	100%	pos 42110 (F-)
CH1073-810B18	BX255911.8	100%	pos 174186 (R+)	BX511069.14	100%	pos 9091 (F-)
CH1073-817C12				BX511069.14	100%	pos 12023 (F-)
CH1073-823G11	BX511069.14	100%	pos 46631 (R+)
CH1073-830F17	BX255911.8	99.72%	pos 147311 (R+)	BX255911.8	100%	pos 183557 (F-)
CH1073-834P2				BX255911.8	100%	pos 36394 (F+)
CH1073-848H23				BX255911.8	99.78%	pos 113115 (F-)
CH1073-849C16	BX255911.8	100%	pos 94432 (R-)	BX255911.8	100%	pos 61226 (F+)
CH1073-854I5	BX511069.14	100%	pos 58061 (R+)
CH1073-859C9	BX255911.8	100%	pos 75971 (R-)	BX255911.8	100%	pos 35654 (F+)
CH1073-881K11	BX511069.14	100%	pos 47760 (R+)
CH1073-894E22	BX255911.8	100%	pos 100160 (R-)	BX255911.8	99.85%	pos 66561 (F+)
CH1073-902O15	BX255911.8	100%	pos 112754 (R-)	BX255911.8	100%	pos 79690 (F+)
CH1073-913G18	BX255911.8	100%	pos 64134 (R-)	BX255911.8	100%	pos 31246 (F+)
CH1073-925G8	BX255911.8	99.65%	pos 125590 (R-)	BX255911.8	100%	pos 94566 (F+)
CH1073-929H23				BX255911.8	100%	pos 5589 (F-)
CH1073-936A4	BX255911.8	99.63%	pos 103268 (R-)	BX255911.8	99.69%	pos 70863 (F+)
CH1073-942E9	BX255911.8	100%	pos 54423 (R-)
ZFOS-1012E3	BX511069.14	100%	pos 47595 (R+)
ZFOS-1087F4	BX511069.14	100%	pos 47663 (R-)
ZFOS-1093B2	BX255911.8	99.71%	pos 203314 (R+)	BX511069.14	100%	pos 42204 (F-)
ZFOS-1098G6	BX511069.14	100%	pos 31116 (R-)	BX255911.8	100%	pos 198820 (F+)
ZFOS-1197C11	BX255911.8	100%	pos 166687 (R+)	BX511069.14	100%	pos 3384 (F-)
ZFOS-1206E9				BX511069.14	100%	pos 59225 (F-)
ZFOS-125F12	BX255911.8	99.85%	pos 78096 (R+)	BX255911.8	100%	pos 116332 (F-)
ZFOS-1297D8	BX511069.14	100%	pos 13872 (R+)	BX511069.14	100%	pos 52654 (F-)
ZFOS-1365C7	BX255911.8	99.86%	pos 163841 (R+)	BX255911.8	100%	pos 204126 (F-)
ZFOS-1390E3	BX255911.8	100%	pos 75383 (R+)	BX255911.8	100%	pos 117381 (F-)
ZFOS-1469D3	BX511069.14	100%	pos 46148 (R+)
ZFOS-1510E7	BX255911.8	100%	pos 194459 (R+)	BX511069.14	99.86%	pos 33117 (F-)
ZFOS-1544H4	BX255911.8	99.82%	pos 54881 (R-)	BX255911.8	100%	pos 13033 (F+)
ZFOS-171E1	BX255911.8	100%	pos 80662 (R+)	BX255911.8	100%	pos 116301 (F-)
ZFOS-1744E12	BX255911.8	100%	pos 198803 (R+)	BX511069.14	99.86%	pos 33025 (F-)
ZFOS-1774E12	BX255911.8	100%	pos 77252 (R+)	BX255911.8	100%	pos 116219 (F-)
ZFOS-1851A10				BX511069.14	100%	pos 47058 (F+)
ZFOS-1993H5	BX511069.14	99.69%	pos 47389 (R+)
ZFOS-2137E9				BX255911.8	100%	pos 9722 (F-)
ZFOS-2224F1	BX511069.14	100%	pos 47198 (R-)	BX511069.14	100%	pos 14256 (F+)
ZFOS-2301D5	BX255911.8	100%	pos 115347 (R-)	BX255911.8	99.38%	pos 75297 (F+)
ZFOS-2328H3	BX255911.8	100%	pos 111993 (R-)	BX255911.8	100%	pos 72824 (F+)
ZFOS-2375D8	BX511069.14	100%	pos 47080 (R+)
ZFOS-245H6	BX511069.14	100%	pos 47449 (R+)
ZFOS-2568G8	BX511069.14	100%	pos 36100 (R-)	BX255911.8	100%	pos 201364 (F+)
ZFOS-25A1	BX255911.8	100%	pos 188609 (R-)	BX255911.8	100%	pos 149264 (F+)
ZFOS-2683G6	BX255911.8	100%	pos 13788 (R-)
ZFOS-2783F6	BX511069.14	100%	pos 29728 (R-)	BX255911.8	100%	pos 194438 (F+)
ZFOS-2816D7	BX511069.14	100%	pos 47706 (R+)
ZFOS-281G10	BX255911.8	100%	pos 80523 (R+)	BX255911.8	100%	pos 117381 (F-)
ZFOS-281G10	BX255911.8	100%	pos 80607 (R+)
ZFOS-2946D11	BX255911.8	99.84%	pos 38530 (R+)
ZFOS-347A5	BX255911.8	100%	pos 201353 (R+)	BX511069.14	100%	pos 38665 (F-)
ZFOS-499C4	BX255911.8	100%	pos 112078 (R-)	BX255911.8	100%	pos 71344 (F+)
ZFOS-502G3	BX255911.8	100%	pos 17120 (R-)
ZFOS-502G3	BX255911.8	100%	pos 17071 (R-)
ZFOS-525F10	BX255911.8	100%	pos 80167 (R+)
ZFOS-570H4	BX511069.14	100%	pos 59806 (R-)
ZFOS-614B10	BX255911.8	100%	pos 36506 (R+)	BX255911.8	99.85%	pos 74106 (F-)
ZFOS-656H5	BX511069.14	100%	pos 87336 (R+)
ZFOS-697B1	BX511069.14	99.57%	pos 46233 (R+)
ZFOS-700F9	BX511069.14	100%	pos 47089 (R+)
ZFOS-763A11				BX255911.8	100%	pos 196055 (F+)
ZFOS-793D10	BX255911.8	99.87%	pos 180423 (R-)	BX255911.8	99.66%	pos 144685 (F+)
ZFOS-800H9	BX511069.14	100%	pos 30576 (R+)	BX511069.14	99.86%	pos 67152 (F-)
ZFOS-900F11				BX511069.14	100%	pos 46974 (F-)

Repeats

Too repeats, not showing repeat table.

Join Legend

Curator Links

Alignment for BX255911.8 and BX511069.14

Alignment Summary

Alignment 1 of 1