Alignment last updated: 11/11/2008 11:57:00

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for AL357293.16 and AL162395.15

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AL357293.16 Human DNA sequence from clone RP11-418K10 on chromosome 9, complete sequence [htgs_phase3]

Length: 104,596 bp

AL162395.15 Human DNA sequence from clone RP11-62L10 on chromosome 9, complete sequence [htgs_phase3]

Length: 62,860 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 51991
Total Length: 2000
Aligned Length: 2000
Percent Identity: 100
Number of Gaps: 0
Number of Mismatches: 0
Source: CtgOverlap Seq-Align
Valid Switchpoint: true (L)
Valid Switchpoint: true (A)

Switch Points

Type	Point1	Point2	Orient1	Orient2	Curator	Comment	Time	Id	Alignment	Releases
L	104596	2001	+	+	chenhc	Taxid 9606 chrom 9 Primary assembly	2008-08-08 12:38:42.246	14414	51991	GRCh38, GRCh37, Hs36
A	104596	2001	+	+	chenhc	Taxid 9606 chrom 9 Primary assembly	2008-11-11 11:57:00.180	40689	51991

Alignment 1 of 1

 AL357293.16 : + : 102597..104596
 AL162395.15 : + : 1..2000
 Mismatches = 0, Gaps = 0, Length = 2000
 Percent identity = 100%
 Score = 3965 bits (2000), Expect = 0
  0 BAC and 46 Fosmid bridging clones.
  0 BAC and 46 Fosmid concordant clones.
  0 BAC and 0 Fosmid discordant clones.

AL357293.16 >102597  gaattcttgcttagacctcagaaacaactcagaactagagcagttgatgagaaaatcatc 102656 
AL162395.15 >1       ............................................................ 60     

AL357293.16 >102657  aacatttagatggaaatatatagcgatggcatgaacaaaactgctcgaggagagtgagat 102716 
AL162395.15 >61      ............................................................ 120    

AL357293.16 >102717  tgaggagagacatccacattcaataaggaaacttcagagagggagactcaggagtctgtg 102776 
AL162395.15 >121     ............................................................ 180    

AL357293.16 >102777  agagaggggcaatggaagtgctaagggcccaggccaggtgcagagactggccttgagtag 102836 
AL162395.15 >181     ............................................................ 240    

AL357293.16 >102837  gaggatagtctccctttgaactgtatgagatggggagtggggttacatgggaatagcaca 102896 
AL162395.15 >241     ............................................................ 300    

AL357293.16 >102897  gccagtgtcttttctcctctctgaacaaagtaggagtcaagggcatctttagaggtgacg 102956 
AL162395.15 >301     ............................................................ 360    

AL357293.16 >102957  gtctggaggcaggaatgccaccttgataagaatataattggaagttctgctgtgggaagt 103016 
AL162395.15 >361     ............................................................ 420    

AL357293.16 >103017  gattcagggaagggagaacataactaggactgagttacagcagctgaagttggataattt 103076 
AL162395.15 >421     ............................................................ 480    

AL357293.16 >103077  atctcaaggtggagtccatcactgcatttgtgtgatttccttaagtgggatttaatagtt 103136 
AL162395.15 >481     ............................................................ 540    

AL357293.16 >103137  tggagtgggaataaaaatgaataaaaaggaggagatgacctccaatcccattacatttcc 103196 
AL162395.15 >541     ............................................................ 600    

AL357293.16 >103197  tcttgcttgctctacattttgccctccttcctgttccttgaatacagctggaataccaga 103256 
AL162395.15 >601     ............................................................ 660    

AL357293.16 >103257  tgtcccacctgcaggaatttttccggaaagctaactgcttgatttacttcctttctgtca 103316 
AL162395.15 >661     ............................................................ 720    

AL357293.16 >103317  ttgctcgtatctgaccttctccatgaggtctaccctgaccatcctgtttaatattttaac 103376 
AL162395.15 >721     ............................................................ 780    

AL357293.16 >103377  ttcaattttctacatttctgatctcccatcctctctaccccttcttttacccatcacact 103436 
AL162395.15 >781     ............................................................ 840    

AL357293.16 >103437  tacctcctaacatattaaataatttactcatttatcatatttactgtttattctctgtct 103496 
AL162395.15 >841     ............................................................ 900    

AL357293.16 >103497  cccttcactggtatgggagctccatgaggacaggaatctttactctatgatgtatcctaa 103556 
AL162395.15 >901     ............................................................ 960    

AL357293.16 >103557  atggtcagaacagtacctggcacataatagtggttcaataaatatttgttgaataaaatt 103616 
AL162395.15 >961     ............................................................ 1020   

AL357293.16 >103617  aggttgactgaagaaatgtgggtgtcagtgaaggcatatattgtttattagttttggtcg 103676 
AL162395.15 >1021    ............................................................ 1080   

AL357293.16 >103677  aaccagaaacagaaaatccgtatgaaacctaaactttttactgttatcttttttatttac 103736 
AL162395.15 >1081    ............................................................ 1140   

AL357293.16 >103737  tttgtaacaaatttcttaggttataaaattaaattatgccctctccctcttcagataccc 103796 
AL162395.15 >1141    ............................................................ 1200   

AL357293.16 >103797  ccttctccctctccttccatgttcagttgtagttataacctactctgttagatcactcac 103856 
AL162395.15 >1201    ............................................................ 1260   

AL357293.16 >103857  tcacatctaagaataaaatcatctcaatatgattgtttttcatacaggcattttgccttc 103916 
AL162395.15 >1261    ............................................................ 1320   

AL357293.16 >103917  taaatttctctctctcactctttccttatctatctagaccactgttaattccagtagtct 103976 
AL162395.15 >1321    ............................................................ 1380   

AL357293.16 >103977  agaagtgtttggaagttggaggaggtattttgttgtaggtggcagtagtggggaagacca 104036 
AL162395.15 >1381    ............................................................ 1440   

AL357293.16 >104037  tgatgaccatggcataggaagaacttcttcttctacctttacatgaaatggcactttttt 104096 
AL162395.15 >1441    ............................................................ 1500   

AL357293.16 >104097  cctgccacacttctctgtagagtgctgatgtttccctagaaaaagattcccttttttgcc 104156 
AL162395.15 >1501    ............................................................ 1560   

AL357293.16 >104157  caatgaattctagataatcaggtaagtgaactcagttgcaagattcaatgaactatttta 104216 
AL162395.15 >1561    ............................................................ 1620   

AL357293.16 >104217  atgtttcgtggagttattctacatatttacctaaaaaacagtcttgagactgcgagattt 104276 
AL162395.15 >1621    ............................................................ 1680   

AL357293.16 >104277  tattatttgtttttccgtatatttgaagatctggtaaaagtgataaaactaactttacag 104336 
AL162395.15 >1681    ............................................................ 1740   

AL357293.16 >104337  caggtatgttttttaacttaaaaagattagtgactttaagtcagattgagaccgggtggg 104396 
AL162395.15 >1741    ............................................................ 1800   

AL357293.16 >104397  ggtggctcttctcagaggagcaaagcaggatttcctgccctctcccaacaggggaggacc 104456 
AL162395.15 >1801    ............................................................ 1860   

AL357293.16 >104457  ctgcttcttactcacacagagtctggggcttagcaggtcagctctcattttcctctcaac 104516 
AL162395.15 >1861    ............................................................ 1920   

AL357293.16 >104517  ctcaaacttaggcaggccctgcttgtctttactgcggggacaatctttttcaagcttcct 104576 
AL162395.15 >1921    ............................................................ 1980   

AL357293.16 >104577  ctcctgcccctaatcctttt 104596 
AL162395.15 >1981    .................... 2000

Events

Id	Type	Date	Whodid	Comment
81169	InitHasAlign	10/01/2006 05:48:42	jcherry	blast parameters: -W 28 -r 1 -q -3 -e 1e-5 -Z 200 -F 'm L; R' bandwidths: 501 701 1001 5001 Toolkit wrapper version: built Thu Aug 17 17:58:09 EDT 2006 using /netopt/ncbi_tools/c++.by-date/production/20060730 Running blast for AL162395.15 and AL357293.16 Found 1 acceptable dovetail alignment(s) by blast -W 28 -r 1 -q -3 -e 1e-5 -Z 200 -F 'm L; R'
125171	CreateSwitchPt	08/08/2008 12:38:42	chenhc	From Hs build 36.1 agp files
151446	CreateSwitchPt	11/11/2008 11:57:00	chenhc	contig_builder 1.3 Toolkit wrapper version: built Nov 10 2008 using /netopt/ncbi_tools64/c++.by-date/20081110/GCC401-Release64/lib

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH17-103E01	AL162395.15	99.08%	pos 51022 (R-)
CH17-141P15				AL162395.15	97.95%	pos 51117 (F+)
CH17-210M15				AL162395.15	97.59%	pos 18848 (F+)
CH17-228M12				AL357293.16	99.19%	pos 34567 (F+)
CH17-266D08				AL357293.16	97.93%	pos 101346 (F+)
CH17-393P06	AL357293.16	98.17%	pos 63376 (R+)
CH17-397O13	AL357293.16	98.59%	pos 89792 (R+)
CH17-405G07				AL357293.16	98.34%	pos 4701 (F-)
CH17-40G24				AL162395.15	98.46%	pos 32472 (F+)
CH17-431E19	AL357293.16	98.76%	pos 92087 (R+)
CH17-456N16	AL162395.15	99.25%	pos 50904 (R-)
CH17-468H22				AL357293.16	98.38%	pos 1979 (F-)
CH17-4H22				AL357293.16	98.04%	pos 2821 (F+)
CH17-4H22				AL357293.16	97.65%	pos 2824 (F+)
CTC-775J23				AL357293.16	100%	pos 51397 (F-)
CTD-2166L19	AL357293.16	99.83%	pos 3078 (R+)
CTD-2196P20	AL357293.16	100%	pos 50985 (R+)
CTD-2378F15				AL357293.16	99.74%	pos 50165 (F-)
CTD-2385A18				AL162395.15	98.15%	pos 58266 (F+)
CTD-2583N14				AL357293.16	98.95%	pos 101221 (F-)
CTD-2583N15				AL357293.16	99.73%	pos 101221 (F-)
RP11-1150H10				AL162395.15	98.14%	pos 21503 (F+)
RP11-354M11	AL357293.16	100%	pos 24975 (R-)
RP11-432O11				AL357293.16	98.4%	pos 48829 (F+)
RP11-485C6				AL357293.16	98.75%	pos 72934 (F-)
RP11-647F3	AL162395.15	98.4%	pos 21167 (R-)
RP11-80H12				AL162395.15	99.51%	pos 60907 (F+)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
ABC10-1608670M9				AL357293.16	100%	pos 85251 (F+)
ABC10-43645300H11				AL162395.15	98.33%	pos 41139 (F+)
ABC10-44083400C1				AL162395.15	100%	pos 35472 (F+)
ABC10-44093000E23	AL162395.15	100%	pos 35446 (R-)	AL357293.16	98.56%	pos 97798 (F+)
ABC10-44140200K23	AL162395.15	98.57%	pos 1514 (R-)	AL357293.16	99.47%	pos 62650 (F+)
ABC10-44140200K23	AL357293.16	98.57%	pos 104110 (R-)
ABC10-44443100F20	AL357293.16	99.7%	pos 492 (R+)	AL357293.16	99.59%	pos 42056 (F-)
ABC10-44453300F18	AL357293.16	99.47%	pos 25953 (R+)	AL357293.16	100%	pos 66265 (F-)
ABC10-44461400J4				AL357293.16	99.73%	pos 29099 (F-)
ABC10-44462100G13	AL357293.16	99.84%	pos 92884 (R-)	AL357293.16	99.55%	pos 51841 (F+)
ABC10-44462100H1				AL357293.16	99.3%	pos 70304 (F-)
ABC10-44484200J8	AL162395.15	99.61%	pos 44111 (R-)
ABC10-44511600N24	AL162395.15	98.77%	pos 15550 (R+)	AL162395.15	98.86%	pos 54064 (F-)
ABC10-44511700F18	AL162395.15	99.28%	pos 15549 (R+)	AL162395.15	99.86%	pos 54146 (F-)
ABC10-44515900M6	AL162395.15	99.18%	pos 57265 (R+)
ABC10-44552300D11	AL162395.15	99.29%	pos 15559 (R+)	AL162395.15	99.86%	pos 54134 (F-)
ABC10-44555500E6	AL162395.15	99.31%	pos 15556 (R+)	AL162395.15	99.65%	pos 54140 (F-)
ABC10-44557400O7	AL357293.16	100%	pos 6165 (R+)	AL357293.16	99.71%	pos 49137 (F-)
ABC10-44563100F10	AL357293.16	99.59%	pos 86309 (R-)
ABC10-44564800J8				AL357293.16	99.37%	pos 19060 (F+)
ABC10-44572300J16				AL162395.15	99.01%	pos 41956 (F+)
ABC10-44590100C13	AL162395.15	99.63%	pos 11042 (R+)	AL162395.15	98.83%	pos 51397 (F-)
ABC10-44637800A12				AL162395.15	99.82%	pos 24788 (F+)
ABC10-44686600I24				AL357293.16	99.07%	pos 777 (F+)
ABC10-44746900N10	AL162395.15	98.42%	pos 42484 (R+)
ABC10-44788100A1				AL357293.16	99.6%	pos 85233 (F+)
ABC10-45495700N5	AL162395.15	99.83%	pos 54409 (R-)
ABC10-45501100M3	AL357293.16	99.83%	pos 72003 (R+)	AL162395.15	99.86%	pos 9965 (F-)
ABC10-45501200M7				AL357293.16	99%	pos 26681 (F+)
ABC10-45509200P22				AL357293.16	99.44%	pos 70323 (F-)
ABC10-45511300D6	AL162395.15	99.7%	pos 55973 (R-)	AL162395.15	100%	pos 14507 (F+)
ABC10-45513000H4				AL162395.15	99.35%	pos 39580 (F-)
ABC10-45515300F7	AL357293.16	99.85%	pos 72019 (R+)
ABC10-45519200E6	AL162395.15	99.03%	pos 43067 (R-)
ABC10-45543200P18				AL357293.16	99.83%	pos 42038 (F-)
ABC11-47092300K9	AL357293.16	98.95%	pos 93596 (R-)
ABC11-47138900D14	AL162395.15	99.23%	pos 47622 (R-)
ABC11-47167200G2				AL162395.15	100%	pos 10237 (F+)
ABC11-47187900P15	AL162395.15	99.45%	pos 32832 (R+)
ABC11-47211800K12	AL357293.16	99.6%	pos 93903 (R+)
ABC11-47248500M14				AL162395.15	100%	pos 60004 (F-)
ABC11-47354000J13				AL162395.15	99.74%	pos 40724 (F+)
ABC11-47356300A20	AL357293.16	99.48%	pos 78105 (R-)
ABC11-47365500M13				AL357293.16	99.21%	pos 54228 (F+)
ABC11-47998300E17	AL357293.16	99.22%	pos 91825 (R+)	AL162395.15	99.38%	pos 24807 (F-)
ABC11-48000400J13	AL357293.16	99.47%	pos 93895 (R+)
ABC11-48023200K18				AL357293.16	99.04%	pos 85972 (F-)
ABC11-48195800G8	AL162395.15	99.86%	pos 39846 (R+)
ABC11-48256000O2				AL357293.16	99.8%	pos 28586 (F-)
ABC11-48295300B10	AL162395.15	98.3%	pos 39850 (R+)
ABC11-48332900J4				AL162395.15	98.73%	pos 7034 (F-)
ABC11-49338300A6	AL357293.16	100%	pos 78109 (R-)	AL357293.16	99.31%	pos 36543 (F+)
ABC11-49404700M17	AL162395.15	99.17%	pos 22056 (R-)
ABC11-49405000O4				AL357293.16	99.74%	pos 32684 (F-)
ABC11-49430700I17				AL357293.16	99.42%	pos 5677 (F-)
ABC11-49431300M15	AL357293.16	99.85%	pos 78754 (R-)	AL357293.16	99.26%	pos 35697 (F+)
ABC11-49432100I15	AL357293.16	98.97%	pos 78751 (R-)
ABC12-46341300B18	AL162395.15	99.71%	pos 31348 (R+)
ABC12-46341500I5	AL162395.15	99.85%	pos 47696 (R+)
ABC12-46342100F5	AL357293.16	99.22%	pos 97836 (R-)
ABC12-46673800N19				AL162395.15	100%	pos 53764 (F+)
ABC12-46727900N10				AL162395.15	99.4%	pos 45008 (F-)
ABC12-46761200E5	AL357293.16	100%	pos 22133 (R+)	AL357293.16	99.16%	pos 62083 (F-)
ABC12-46796400L23	AL162395.15	100%	pos 6428 (R+)	AL162395.15	98.55%	pos 45008 (F-)
ABC12-46851800B24				AL162395.15	99.77%	pos 28876 (F+)
ABC12-46883200B8	AL162395.15	99.62%	pos 53537 (R+)
ABC12-46920100A11	AL162395.15	99.39%	pos 32434 (R+)
ABC12-46968300F24	AL357293.16	99.03%	pos 19618 (R+)	AL357293.16	99.15%	pos 58975 (F-)
ABC12-46973100C6				AL357293.16	99.61%	pos 58334 (F+)
ABC12-46979500O15				AL162395.15	99.72%	pos 3055 (F-)
ABC12-46993200G4	AL357293.16	100%	pos 89878 (R+)	AL162395.15	99.48%	pos 27227 (F-)
ABC12-47012200P7	AL357293.16	99.87%	pos 36791 (R+)	AL357293.16	99.86%	pos 76475 (F-)
ABC12-47013200O13	AL357293.16	100%	pos 64563 (R-)
ABC12-47015400K6	AL357293.16	100%	pos 22105 (R+)
ABC12-47030700H24	AL162395.15	98.33%	pos 51239 (R+)
ABC12-47036000M7	AL357293.16	98.21%	pos 12879 (R-)
ABC12-47042400E11	AL162395.15	98.49%	pos 6434 (R+)	AL162395.15	98.62%	pos 45026 (F-)
ABC12-47949400A20	AL357293.16	100%	pos 61375 (R+)	AL357293.16	97.47%	pos 100956 (F-)
ABC12-47980800A17				AL357293.16	99.45%	pos 36288 (F+)
ABC12-49048000F7	AL357293.16	99.28%	pos 89881 (R+)	AL162395.15	99.86%	pos 27228 (F-)
ABC12-49071500M14	AL162395.15	100%	pos 34622 (R+)
ABC12-49096800F16	AL357293.16	99.61%	pos 75921 (R+)	AL162395.15	99.62%	pos 14668 (F-)
ABC12-49096800O18	AL357293.16	98.89%	pos 75928 (R+)	AL162395.15	99.85%	pos 14659 (F-)
ABC12-49223000I20				AL357293.16	98.8%	pos 54898 (F+)
ABC12-49225800G23	AL162395.15	99.04%	pos 56666 (R+)
ABC12-7919649D20	AL357293.16	99.85%	pos 64246 (R+)	AL162395.15	99.53%	pos 2502 (F-)
ABC13-47486600K15				AL162395.15	100%	pos 31846 (F+)
ABC13-47493700J15	AL357293.16	99.21%	pos 85536 (R-)
ABC13-47627400J24	AL357293.16	99.86%	pos 10911 (R+)
ABC13-47655900P10				AL162395.15	100%	pos 55292 (F+)
ABC13-48053900E1	AL162395.15	100%	pos 2685 (R+)
ABC13-48062700O17	AL162395.15	99.18%	pos 3711 (R-)
ABC13-48555300M16				AL357293.16	100%	pos 100462 (F-)
ABC13-48560800C14				AL162395.15	100%	pos 28980 (F-)
ABC13-48562200P22				AL357293.16	99.23%	pos 46075 (F-)
ABC13-48573600L17	AL162395.15	99.4%	pos 16833 (R+)	AL162395.15	100%	pos 57602 (F-)
ABC13-48737000H10	AL162395.15	99.83%	pos 50022 (R+)
ABC13-48837600K2				AL357293.16	99.47%	pos 68228 (F+)
ABC13-48841100J23				AL162395.15	99.65%	pos 12327 (F+)
ABC13-48853100N4				AL162395.15	99.67%	pos 12335 (F+)
ABC13-48856100H11				AL357293.16	99.87%	pos 68213 (F+)
ABC13-48904000C15	AL162395.15	98.24%	pos 17381 (R-)
ABC13-49713400M19				AL357293.16	99.86%	pos 48762 (F-)
ABC14-1036414H20	AL162395.15	100%	pos 8018 (R-)
ABC14-1051314B24	AL357293.16	100%	pos 31265 (R+)	AL357293.16	99.72%	pos 71907 (F-)
ABC14-1054922E8				AL357293.16	100%	pos 53219 (F+)
ABC14-1079114N11				AL357293.16	99.73%	pos 27336 (F-)
ABC14-1114222H3				AL162395.15	99.05%	pos 30256 (F+)
ABC14-1114222H3				AL162395.15	99.73%	pos 30260 (F+)
ABC14-50075200A10				AL162395.15	98.29%	pos 15501 (F-)
ABC14-50075200N15				AL162395.15	97.3%	pos 15565 (F-)
ABC14-50076300K7	AL357293.16	99.86%	pos 85282 (R+)
ABC14-50083200H14	AL357293.16	100%	pos 90965 (R-)	AL357293.16	100%	pos 51571 (F+)
ABC14-50083500L8	AL162395.15	100%	pos 40649 (R+)
ABC14-50088800A16	AL162395.15	100%	pos 15651 (R-)	AL357293.16	99.73%	pos 80654 (F+)
ABC14-50097500N15	AL162395.15	100%	pos 32059 (R-)	AL357293.16	99.87%	pos 94316 (F+)
ABC14-50100500A6	AL162395.15	98.89%	pos 18530 (R+)	AL162395.15	100%	pos 56901 (F-)
ABC14-50104200N3				AL357293.16	99.85%	pos 28802 (F+)
ABC14-50113500I21				AL162395.15	99.71%	pos 7571 (F-)
ABC14-50121700C19	AL357293.16	100%	pos 20365 (R+)
ABC14-50123000P14				AL162395.15	99.23%	pos 44909 (F-)
ABC14-50135900E23	AL162395.15	100%	pos 9977 (R-)	AL357293.16	99.46%	pos 74740 (F+)
ABC14-50146800M13	AL162395.15	99.85%	pos 52947 (R-)
ABC14-50159900J17				AL162395.15	100%	pos 61683 (F+)
ABC14-50164500I20	AL357293.16	100%	pos 23972 (R+)	AL357293.16	99.71%	pos 62858 (F-)
ABC14-50170400I4				AL162395.15	99.57%	pos 25688 (F+)
ABC14-50178200F21				AL162395.15	99.66%	pos 25687 (F+)
ABC14-50188800L23				AL162395.15	100%	pos 54879 (F-)
ABC14-50210600G6				AL357293.16	99.86%	pos 48236 (F-)
ABC14-50210600I8				AL357293.16	99.85%	pos 48238 (F-)
ABC14-50210800H11	AL162395.15	99.45%	pos 12566 (R-)
ABC14-50404700M2	AL357293.16	99.85%	pos 100967 (R-)
ABC14-50406100M15	AL162395.15	99.53%	pos 7611 (R-)	AL357293.16	99.33%	pos 68608 (F+)
ABC14-50925500A8				AL357293.16	100%	pos 51677 (F+)
ABC14-50996700M3				AL162395.15	99.85%	pos 52143 (F+)
ABC14-951314M18				AL357293.16	100%	pos 91328 (F+)
ABC14-974114C2				AL162395.15	99.85%	pos 30516 (F+)
ABC14-982914H19				AL357293.16	99.85%	pos 8326 (F+)
ABC7-40253500G20	AL357293.16	99.79%	pos 78049 (R-)	AL357293.16	99.14%	pos 38750 (F+)
ABC7-40256800A8	AL162395.15	99.49%	pos 52343 (R-)	AL162395.15	99.53%	pos 15610 (F+)
ABC7-40267200H15	AL357293.16	99.73%	pos 53385 (R+)	AL357293.16	99.82%	pos 94457 (F-)
ABC7-40277200D8	AL357293.16	99.87%	pos 83321 (R-)	AL357293.16	100%	pos 45962 (F+)
ABC7-40277800J12	AL357293.16	99.68%	pos 38888 (R+)	AL357293.16	99.81%	pos 80364 (F-)
ABC7-40278000M24	AL357293.16	99.43%	pos 69777 (R+)	AL162395.15	99.16%	pos 5836 (F-)
ABC7-40284000H10	AL357293.16	99.47%	pos 57800 (R-)
ABC7-40590200P7	AL357293.16	99%	pos 30418 (R+)	AL357293.16	99.81%	pos 71018 (F-)
ABC7-40624700P4	AL357293.16	99.73%	pos 34522 (R-)
ABC7-40627600J20				AL162395.15	99.69%	pos 42398 (F+)
ABC7-40637000M6	AL357293.16	99.85%	pos 80926 (R+)	AL162395.15	100%	pos 14726 (F-)
ABC7-40650000F13	AL357293.16	99.24%	pos 92152 (R+)	AL162395.15	99.01%	pos 25581 (F-)
ABC7-40657500H1	AL357293.16	99.48%	pos 45605 (R+)	AL357293.16	99.62%	pos 81714 (F-)
ABC7-41847800E13	AL357293.16	99.22%	pos 65142 (R+)	AL162395.15	99.47%	pos 2503 (F-)
ABC7-41852200B12	AL357293.16	99.87%	pos 39179 (R+)	AL357293.16	100%	pos 81452 (F-)
ABC7-42055000L6	AL357293.16	99.62%	pos 84249 (R-)	AL357293.16	100%	pos 48534 (F+)
ABC7-42056800F9	AL357293.16	100%	pos 5721 (R-)
ABC7-42386600O15				AL162395.15	98.33%	pos 33694 (F+)
ABC7-42393400I16	AL162395.15	99.51%	pos 49854 (R+)
ABC7-42402700J10	AL357293.16	99.52%	pos 19075 (R-)
ABC7-42405600N6	AL162395.15	98.72%	pos 12570 (R-)	AL357293.16	99.03%	pos 75105 (F+)
ABC7-42408100A10	AL162395.15	99.44%	pos 49336 (R-)	AL162395.15	99.37%	pos 10821 (F+)
ABC7-42417500J13	AL357293.16	99.43%	pos 25934 (R-)
ABC7-42420300F22				AL162395.15	99.86%	pos 23268 (F+)
ABC7-42428400C12				AL357293.16	98.46%	pos 20890 (F-)
ABC7-42432400C8	AL162395.15	99.01%	pos 28271 (R+)	AL162395.15	99.58%	pos 61375 (F-)
ABC7-42433600I15	AL357293.16	99.03%	pos 72952 (R+)	AL162395.15	99.53%	pos 3465 (F-)
ABC7-42451500G21	AL162395.15	99.44%	pos 13861 (R+)	AL162395.15	99.55%	pos 44403 (F-)
ABC7-42455500H15				AL162395.15	99.27%	pos 46183 (F+)
ABC7-42460600O5	AL357293.16	100%	pos 60843 (R+)	AL162395.15	99.78%	pos 3683 (F-)
ABC7-42483200F6	AL162395.15	100%	pos 33634 (R+)
ABC7-42485700P4	AL357293.16	100%	pos 99027 (R+)	AL162395.15	98.95%	pos 29301 (F-)
ABC7-42498800C3	AL357293.16	99.32%	pos 85871 (R+)	AL162395.15	99.87%	pos 27890 (F-)
ABC7-42500100C9				AL162395.15	98.69%	pos 35147 (F-)
ABC7-42505300A18	AL357293.16	99.67%	pos 98301 (R+)	AL162395.15	99.4%	pos 33479 (F-)
ABC7-42508700P2	AL357293.16	99.46%	pos 831 (R+)	AL357293.16	99.61%	pos 36199 (F-)
ABC7-42510400L23	AL162395.15	98.09%	pos 11964 (R-)	AL357293.16	98.53%	pos 73913 (F+)
ABC7-42750600D15				AL162395.15	99.79%	pos 47964 (F+)
ABC7-42750700F12				AL162395.15	99.86%	pos 8389 (F-)
ABC7-42756400O16	AL357293.16	100%	pos 97649 (R+)	AL162395.15	99.72%	pos 30015 (F-)
ABC7-43054700J4				AL162395.15	100%	pos 55426 (F+)
ABC7-43056800I4	AL162395.15	99.84%	pos 18250 (R-)	AL357293.16	99.72%	pos 84869 (F+)
ABC7-43056800I5	AL357293.16	99.69%	pos 31764 (R+)	AL357293.16	99.73%	pos 64876 (F-)
ABC7-43059200B22	AL357293.16	99.69%	pos 18117 (R+)	AL357293.16	100%	pos 59408 (F-)
ABC7-43062000J6	AL357293.16	99.86%	pos 20400 (R+)	AL357293.16	99.86%	pos 52167 (F-)
ABC7-43073400B9	AL357293.16	99.82%	pos 100806 (R+)	AL162395.15	98.36%	pos 41364 (F-)
ABC7-43076000D19	AL162395.15	97.42%	pos 35924 (R+)
ABC7-43085600C19	AL357293.16	99.6%	pos 59744 (R-)	AL357293.16	99.2%	pos 25445 (F+)
ABC7-43090800F24				AL162395.15	99.85%	pos 25882 (F+)
ABC7-43091200P14				AL357293.16	99.83%	pos 13766 (F-)
ABC7-473922E16	AL357293.16	99.62%	pos 82415 (R+)	AL162395.15	100%	pos 13471 (F-)
ABC7-475922H17	AL162395.15	99.1%	pos 37402 (R+)
ABC7-478622E15	AL162395.15	99.6%	pos 6851 (R-)	AL357293.16	100%	pos 77533 (F+)
ABC7-611722A16	AL162395.15	99.59%	pos 42727 (R-)	AL162395.15	100%	pos 8025 (F+)
ABC7-619422A24				AL162395.15	99.68%	pos 34456 (F+)
ABC8-2122440B24	AL357293.16	99.09%	pos 75925 (R+)	AL162395.15	99.02%	pos 8198 (F-)
ABC8-2126540F14	AL162395.15	99.71%	pos 58046 (R-)	AL162395.15	98.29%	pos 20807 (F+)
ABC8-2132640B17	AL162395.15	99.87%	pos 5931 (R+)	AL162395.15	98.96%	pos 45217 (F-)
ABC8-2135040N2				AL162395.15	99.43%	pos 51272 (F-)
ABC8-2146740N10				AL357293.16	99.87%	pos 27142 (F-)
ABC8-2150140M6	AL357293.16	100%	pos 74775 (R+)	AL162395.15	99.72%	pos 1616 (F-)
ABC8-2150140M6				AL357293.16	99.72%	pos 104212 (F-)
ABC8-2150940F3				AL357293.16	100%	pos 31398 (F-)
ABC8-2606340F17	AL357293.16	99.86%	pos 61617 (R+)	AL357293.16	99.43%	pos 102850 (F-)
ABC8-2609040F4	AL162395.15	99.79%	pos 12339 (R+)
ABC8-2620640K17				AL162395.15	99.17%	pos 42440 (F-)
ABC8-40289600N4	AL357293.16	99.7%	pos 12148 (R+)
ABC8-40299800E12	AL357293.16	99.46%	pos 23763 (R+)
ABC8-40857200D8	AL357293.16	100%	pos 1818 (R-)
ABC8-40889400B2	AL162395.15	99.14%	pos 1793 (R+)	AL162395.15	99.87%	pos 33257 (F-)
ABC8-40910700J18	AL162395.15	99.06%	pos 57299 (R-)	AL162395.15	97.99%	pos 22265 (F+)
ABC8-41020600D14				AL162395.15	98.66%	pos 61541 (F-)
ABC8-41036500H21	AL357293.16	100%	pos 3156 (R-)
ABC8-41063200G19				AL357293.16	100%	pos 28110 (F-)
ABC8-41063400G21				AL357293.16	100%	pos 96463 (F-)
ABC8-41064400I20	AL357293.16	99.55%	pos 85836 (R-)
ABC8-41078600L16	AL357293.16	100%	pos 55888 (R+)
ABC8-41083600N4				AL357293.16	100%	pos 28330 (F-)
ABC8-41112300C9	AL162395.15	100%	pos 38960 (R-)	AL162395.15	99.42%	pos 4032 (F+)
ABC8-41141100I21				AL162395.15	99.67%	pos 4602 (F+)
ABC8-41142600E8	AL357293.16	99.87%	pos 1832 (R-)
ABC8-41144600C1	AL357293.16	99.85%	pos 94763 (R+)	AL162395.15	99.29%	pos 28243 (F-)
ABC8-41153200H17				AL162395.15	99.59%	pos 47053 (F+)
ABC8-41164500C9	AL357293.16	99.72%	pos 46159 (R+)	AL357293.16	99.83%	pos 83117 (F-)
ABC8-41165400H1	AL357293.16	99.26%	pos 99737 (R+)	AL162395.15	100%	pos 32412 (F-)
ABC8-41170800E10				AL357293.16	99.87%	pos 40585 (F-)
ABC8-41187600D8	AL162395.15	98.32%	pos 60663 (R-)	AL162395.15	99.69%	pos 22469 (F+)
ABC8-41210500D10	AL162395.15	99.49%	pos 57955 (R-)	AL162395.15	99.28%	pos 19589 (F+)
ABC8-41210500H17	AL357293.16	100%	pos 58520 (R+)	AL357293.16	99.7%	pos 97192 (F-)
ABC8-41210600H4				AL357293.16	99.2%	pos 22356 (F+)
ABC8-41210700A3	AL357293.16	99.86%	pos 58532 (R+)	AL357293.16	99.71%	pos 97216 (F-)
ABC8-41211500C12	AL357293.16	99.71%	pos 79920 (R-)	AL357293.16	99.57%	pos 47993 (F+)
ABC8-41224200K17	AL162395.15	99.59%	pos 38178 (R+)
ABC8-41786900K13				AL357293.16	98.95%	pos 54467 (F+)
ABC8-41791000J1	AL162395.15	99.46%	pos 43413 (R-)
ABC8-41793800D21				AL162395.15	98.96%	pos 4923 (F-)
ABC8-42091800A13	AL162395.15	99.3%	pos 11907 (R-)	AL357293.16	100%	pos 75575 (F+)
ABC8-42662900M6	AL357293.16	100%	pos 51816 (R+)
ABC8-42663700K21				AL357293.16	99.72%	pos 34072 (F+)
ABC8-42996200E3	AL357293.16	99.38%	pos 8794 (R+)
ABC8-43009000G12	AL357293.16	100%	pos 3082 (R+)
ABC8-43204700M18	AL162395.15	99.86%	pos 57078 (R-)
ABC8-43242600F12	AL357293.16	99.47%	pos 27947 (R+)
ABC8-43255100O23				AL357293.16	100%	pos 31455 (F-)
ABC8-43256900D2				AL357293.16	100%	pos 90703 (F-)
ABC8-43768800C3				AL357293.16	99.1%	pos 57095 (F+)
ABC8-43784800F14	AL162395.15	99.58%	pos 5501 (R-)	AL357293.16	99.62%	pos 70462 (F+)
ABC8-5705049O7	AL357293.16	99.31%	pos 98139 (R-)
ABC8-5716749L7				AL162395.15	97.92%	pos 26997 (F+)
ABC8-650822M7				AL357293.16	100%	pos 67998 (F-)
ABC8-651922O1	AL357293.16	99.15%	pos 102550 (R+)	AL162395.15	99.67%	pos 39620 (F-)
ABC8-670122B11				AL162395.15	99.47%	pos 37343 (F+)
ABC8-715422F8	AL357293.16	99.7%	pos 78551 (R+)	AL162395.15	99.7%	pos 11205 (F-)
ABC8-719140F9				AL357293.16	99.16%	pos 71715 (F+)
ABC8-728440O19	AL162395.15	99.54%	pos 61269 (R+)
ABC8-737940D18	AL357293.16	99.86%	pos 90119 (R-)	AL357293.16	99.34%	pos 53126 (F+)
ABC8-737940M20	AL357293.16	99.52%	pos 75951 (R+)	AL162395.15	97.34%	pos 8182 (F-)
ABC8-754922K1				AL357293.16	100%	pos 99004 (F+)
ABC8-755122G19	AL162395.15	99.19%	pos 19012 (R+)	AL162395.15	99.86%	pos 56580 (F-)
ABC8-757222E1	AL357293.16	100%	pos 54983 (R+)	AL357293.16	100%	pos 91170 (F-)
ABC9-41267000I20	AL162395.15	100%	pos 26936 (R-)	AL357293.16	99.85%	pos 89980 (F+)
ABC9-41288000D14				AL162395.15	99.7%	pos 3122 (F+)
ABC9-41299100L17	AL357293.16	99.85%	pos 10609 (R-)
ABC9-43323700G2				AL162395.15	100%	pos 13875 (F-)
ABC9-43825300L8	AL357293.16	99.46%	pos 72700 (R-)
ABC9-43843300J14	AL357293.16	98.78%	pos 71670 (R-)	AL357293.16	99.46%	pos 30074 (F+)
ABC9-43862300L17	AL357293.16	100%	pos 71673 (R-)
ABC9-43866500E4	AL357293.16	100%	pos 23659 (R+)
ABC9-43905600O16				AL162395.15	100%	pos 50046 (F+)
ABC9-43914200O14	AL357293.16	99.31%	pos 60611 (R+)	AL357293.16	100%	pos 99002 (F-)
ABC9-43930300G23	AL357293.16	99.73%	pos 22025 (R+)	AL357293.16	99.38%	pos 63228 (F-)
ABC9-43935900A1	AL357293.16	99.41%	pos 67237 (R-)	AL357293.16	99.14%	pos 27371 (F+)
ABC9-43944200P16				AL357293.16	99.12%	pos 76722 (F-)
ABC9-43946000C13	AL357293.16	99.73%	pos 73089 (R+)	AL162395.15	98.78%	pos 11378 (F-)
ABC9-43948600N12	AL357293.16	99.31%	pos 57471 (R-)	AL357293.16	99.86%	pos 20927 (F+)
ABC9-43949300J2				AL357293.16	99.86%	pos 94268 (F+)
ABC9-43952800C20	AL357293.16	99.85%	pos 54805 (R+)	AL357293.16	100%	pos 92427 (F-)
ABC9-43959600L13	AL357293.16	99.71%	pos 5813 (R+)	AL357293.16	99.7%	pos 48223 (F-)
ABC9-43959800C18	AL357293.16	100%	pos 19820 (R+)
ABC9-43963300H6	AL162395.15	99.85%	pos 19081 (R+)	AL162395.15	98.89%	pos 54319 (F-)
ABC9-43965600J9				AL357293.16	100%	pos 94265 (F+)
ABC9-43972000K5				AL357293.16	99.03%	pos 34931 (F-)
ABC9-43977600A12	AL357293.16	100%	pos 73108 (R+)
ABC9-43986100L7				AL357293.16	100%	pos 99001 (F-)
ABC9-43992800A2				AL162395.15	98.61%	pos 29213 (F-)
ABC9-43998400I5	AL357293.16	100%	pos 90527 (R+)	AL162395.15	100%	pos 29212 (F-)
ABC9-44016700N15				AL162395.15	99.71%	pos 6286 (F+)
ABC9-44022200D6				AL162395.15	100%	pos 48261 (F+)
ABC9-44029800J16	AL162395.15	99.84%	pos 19074 (R+)	AL162395.15	99.37%	pos 54307 (F-)
ABC9-44042500L1				AL162395.15	99.86%	pos 28950 (F-)
ABC9-44045500H12	AL162395.15	100%	pos 35036 (R+)
ABC9-44047700H4	AL357293.16	97.93%	pos 57470 (R-)	AL357293.16	100%	pos 20935 (F+)
ABC9-45429800B12				AL162395.15	100%	pos 33116 (F+)
ABC9-45464700N17				AL357293.16	99.83%	pos 20923 (F+)
ABC9-45473500M4				AL357293.16	99.48%	pos 7917 (F-)
ABC9-46008100I8	AL162395.15	98.21%	pos 19905 (R+)
ABC9-46181400N4	AL357293.16	100%	pos 91142 (R+)	AL162395.15	99.86%	pos 28955 (F-)
ABC9-46212200O4	AL162395.15	99.86%	pos 19074 (R+)	AL162395.15	100%	pos 54322 (F-)
ABC9-46273200F16	AL357293.16	99.71%	pos 22047 (R+)
G248P802832A8				AL357293.16	100%	pos 27921 (F+)
G248P802872G11				AL357293.16	100%	pos 12696 (F-)
WI2-0728D03	AL162395.15	99.11%	pos 21025 (R+)	AL162395.15	99.7%	pos 59153 (F-)
WI2-0734J07	AL357293.16	98.98%	pos 439 (R+)
WI2-1052N11	AL357293.16	100%	pos 35027 (R-)
WI2-1087N11	AL162395.15	98.8%	pos 6307 (R-)	AL357293.16	100%	pos 67657 (F+)
WI2-1362D19	AL357293.16	99.6%	pos 91976 (R+)	AL162395.15	100%	pos 28474 (F-)
WI2-1366O12	AL357293.16	99.25%	pos 91979 (R+)
WI2-1539H07				AL357293.16	100%	pos 92557 (F+)
WI2-1549J22				AL357293.16	100%	pos 4782 (F-)
WI2-1597B19				AL357293.16	99.64%	pos 21602 (F-)
WI2-1631M11				AL357293.16	99.82%	pos 54506 (F+)
WI2-1833O10	AL162395.15	100%	pos 38608 (R+)
WI2-1843E18	AL162395.15	99.84%	pos 55683 (R+)
WI2-1914G12	AL162395.15	99.32%	pos 55701 (R+)
WI2-2016H15	AL357293.16	99.86%	pos 3576 (R+)	AL357293.16	99.68%	pos 42475 (F-)
WI2-2022E18	AL357293.16	99.83%	pos 65617 (R+)	AL162395.15	99.66%	pos 6543 (F-)
WI2-2166A13				AL162395.15	100%	pos 38954 (F+)
WI2-2235N12	AL357293.16	100%	pos 90738 (R-)	AL357293.16	99.35%	pos 50835 (F+)
WI2-2254P02				AL357293.16	100%	pos 50812 (F+)
WI2-2337E16	AL357293.16	99.34%	pos 90733 (R-)	AL357293.16	99.84%	pos 50806 (F+)
WI2-2613C11	AL357293.16	99.85%	pos 55793 (R+)	AL357293.16	98.96%	pos 92610 (F-)
WI2-2633O18	AL357293.16	97.33%	pos 51421 (R-)
WI2-2906F08				AL162395.15	100%	pos 26589 (F+)
WI2-2937J19				AL162395.15	99.48%	pos 26570 (F+)
WI2-2957P20	AL357293.16	99.53%	pos 37040 (R-)
WI2-2991K12	AL162395.15	99.21%	pos 21119 (R+)	AL162395.15	100%	pos 60093 (F-)
WI2-3036M16	AL357293.16	100%	pos 47218 (R+)	AL357293.16	99.83%	pos 84426 (F-)
WI2-3178C09	AL357293.16	99.63%	pos 96215 (R-)	AL357293.16	98.98%	pos 56807 (F+)
WI2-3748N23				AL357293.16	99.64%	pos 81032 (F+)
WI2-3764O19	AL357293.16	99.56%	pos 94996 (R-)	AL357293.16	100%	pos 57876 (F+)
WI2-3768G23	AL357293.16	100%	pos 99350 (R-)
WI2-3783M06	AL357293.16	99.39%	pos 100630 (R+)	AL162395.15	99.84%	pos 40444 (F-)

Repeats

acc	start	stop	repeat id	strand	name	family	class
AL357293.16	14869	18347	9636804	+	L1PA5		L1
AL357293.16	19509	19676	9636805	+	MIRb	MIR	SINE
AL357293.16	19893	20444	9636806	-	MLT2A2	ERVL	LTR
AL357293.16	20936	21087	9636807	+	MIRb	MIR	SINE
AL357293.16	21156	21662	9636808	+	MLT1D	ERVL-MaLR	LTR
AL357293.16	22094	22216	9636809	+	MIRc	MIR	SINE
AL357293.16	22244	22298	9636810	-	MIR3	MIR	SINE
AL357293.16	23101	23204	9636811	+	(CA)n		Simple_repeat
AL357293.16	23822	23893	9636812	+	AT_rich		Low_complexity
AL357293.16	23895	24006	9636813	+	GA-rich
AL357293.16	24211	24349	9636814	-	L1ME4c		L1
AL357293.16	24492	24800	9636815	-	LTR85a	Gypsy?	LTR
AL357293.16	24915	25240	9636816	+	AluJb	Alu	SINE
AL357293.16	25251	25436	9636817	+	L3	CR1	LINE
AL357293.16	26052	26115	9636818	+	MADE1	TcMar-Mariner	DNA
AL357293.16	26116	26459	9636819	-	L1PA10		L1
AL357293.16	26460	26504	9636818	+	MADE1	TcMar-Mariner	DNA
AL357293.16	26602	26874	9636820	+	L1ME4a		L1
AL357293.16	26944	27174	9636821	-	MIR	MIR	SINE
AL357293.16	27255	27340	9636822	+	(TA)n		Simple_repeat
AL357293.16	27725	27751	9636823	-	MIR3	MIR	SINE
AL357293.16	27752	27953	9636824	+	MER20	hAT-Charlie	DNA
AL357293.16	27954	28044	9636823	-	MIR3	MIR	SINE
AL357293.16	28117	28361	9636825	+	MIRb	MIR	SINE
AL357293.16	28729	28809	9636826	-	MIR	MIR	SINE
AL357293.16	28821	28896	9636827	-	L1MA10		L1
AL357293.16	28897	29114	9636828	+	L1MB1		L1
AL357293.16	29149	29588	9636829	+	MLT1D	ERVL-MaLR	LTR
AL357293.16	30197	30300	9636829	+	MLT1D	ERVL-MaLR	LTR
AL357293.16	30351	30687	9636830	-	MER52C	ERV1	LTR
AL357293.16	30457	31568	9636831	+	MER52D	ERV1	LTR
AL357293.16	31573	31636	9636831	+	MER52D	ERV1	LTR
AL357293.16	32019	32310	9636832	+	L2b		L2
AL357293.16	14481	14795	9636803	+	AluSx	Alu	SINE
AL357293.16	14320	14443	9636802	-	FLAM_C	Alu	SINE
AL357293.16	13195	13708	9636801	-	L1M5		L1
AL357293.16	12066	12430	9636800	+	L2c		L2
AL357293.16	10232	11117	9636798	-	L1ME1		L1
AL357293.16	9935	10231	9636799	-	AluJb	Alu	SINE
AL357293.16	8820	9934	9636798	-	L1ME1		L1
AL357293.16	8431	8529	9636797	+	L1M5		L1
AL357293.16	8101	8416	9636796	+	AluSx	Alu	SINE
AL357293.16	7920	8036	9636795	+	L1ME4c		L1
AL357293.16	7263	7529	9636794	+	MER102b	hAT-Charlie	DNA
AL357293.16	7014	7137	9636793	-	HAL1	L1	LINE
AL357293.16	6915	6943	9636792	+	AT_rich		Low_complexity
AL357293.16	6912	6937	9636791	+	AT_rich		Low_complexity
AL357293.16	6441	6829	9636790	+	L1PA5		L1
AL357293.16	4605	6407	9636789	+	L1MA9		L1
AL357293.16	4211	4323	9636788	+	MIRb	MIR	SINE
AL357293.16	3890	4189	9636787	+	AluSx	Alu	SINE
AL357293.16	3774	3866	9636786	+	L1MA9		L1
AL357293.16	3718	3771	9636786	+	L1MA9		L1
AL357293.16	3476	3570	9636785	-	MER102c	hAT-Charlie	DNA
AL357293.16	546	1198	9636784	-	L1MC5a		L1
AL357293.16	75	504	9636783	+	Tigger2	TcMar-Tigger	DNA
AL357293.16	12	69	9636782	+	Tigger2a	TcMar-Tigger	DNA
AL357293.16	32322	32875	9636833	-	MLT1K	ERVL-MaLR	LTR
AL357293.16	32906	33432	9636832	+	L2b		L2
AL357293.16	33604	33704	9636834	+	MIRb	MIR	SINE
AL357293.16	34306	34429	9636835	-	L1ME4a		L1
AL357293.16	35385	35904	9636836	+	L1PA4		L1
AL357293.16	36384	36567	9636837	+	L1ME2		L1
AL357293.16	37476	37854	9636837	+	L1ME2		L1
AL357293.16	37956	38047	9636837	+	L1ME2		L1
AL357293.16	38048	39639	9636838	+	L2b		L2
AL357293.16	39695	39806	9636839	-	L2a		L2
AL357293.16	39899	40047	9636838	+	L2b		L2
AL357293.16	40080	42633	9636840	-	L1PA7		L1
AL357293.16	42634	42944	9636841	-	AluY	Alu	SINE
AL357293.16	42945	46705	9636840	-	L1PA7		L1
AL357293.16	46762	46830	9636842	+	AT_rich		Low_complexity
AL357293.16	47962	48033	9636843	+	MIRb	MIR	SINE
AL357293.16	48040	48297	9636844	+	L1ME4a		L1
AL357293.16	48312	48489	9636845	+	(TA)n		Simple_repeat
AL357293.16	48677	48944	9636844	+	L1ME4a		L1
AL357293.16	48945	49425	9636846	-	MER101	ERV1	LTR
AL357293.16	49621	49651	9636847	-	L1P3		L1
AL357293.16	49653	49852	9636848	+	L1PA5		L1
AL357293.16	49855	49933	9636849	+	(TAAA)n		Simple_repeat
AL357293.16	50047	50080	9636850	+	(CA)n		Simple_repeat
AL357293.16	50285	50585	9636851	-	L3	CR1	LINE
AL357293.16	50846	50959	9636851	-	L3	CR1	LINE
AL357293.16	50961	51106	9636852	-	Plat_L3	CR1	LINE
AL357293.16	51161	51216	9636853	-	L2a		L2
AL357293.16	51613	51650	9636854	+	AT_rich		Low_complexity
AL357293.16	51670	51794	9636844	+	L1ME4a		L1
AL357293.16	52014	52125	9636844	+	L1ME4a		L1
AL357293.16	52318	52472	9636844	+	L1ME4a		L1
AL357293.16	52835	53135	9636855	-	AluSx	Alu	SINE
AL357293.16	53191	53307	9636856	+	MamRep488	hAT-Tip100	DNA
AL357293.16	53308	54064	9636857	+	LTR1F1	ERV1	LTR
AL357293.16	54065	54084	9636856	+	MamRep488	hAT-Tip100	DNA
AL357293.16	54094	54240	9636858	-	MIRc	MIR	SINE
AL357293.16	54426	54844	9636859	+	MLT1C	ERVL-MaLR	LTR
AL357293.16	55262	55716	9636860	-	LTR33B	ERVL	LTR
AL357293.16	56292	56558	9636861	-	AluSx	Alu	SINE
AL357293.16	56568	56616	9636862	+	L2a		L2
AL357293.16	56617	57282	9636863	-	L1PA4		L1
AL357293.16	57283	57379	9636862	+	L2a		L2
AL357293.16	57389	57460	9636864	-	MER5A	hAT-Charlie	DNA
AL357293.16	57559	58699	9636865	+	L1ME3F		L1
AL357293.16	60531	60988	9636866	+	MLT2A1	ERVL	LTR
AL357293.16	61791	61899	9636867	+	MIRc	MIR	SINE
AL357293.16	61926	61950	9636868	+	AT_rich		Low_complexity
AL357293.16	62220	62532	9636869	+	AluSx	Alu	SINE
AL357293.16	63026	63219	9636870	-	L1PB1		L1
AL357293.16	63467	64025	9636871	-	MLT2B3	ERVL	LTR
AL357293.16	64310	64546	9636872	+	Charlie7a	hAT-Charlie	DNA
AL357293.16	64567	65187	9636873	+	L2c		L2
AL357293.16	65883	66056	9636874	-	L4_A_Mam	RTE-X	LINE
AL357293.16	66056	67025	9636875	+	L1PA14		L1
AL357293.16	67023	67062	9636876	+	L1PA15		L1
AL357293.16	67263	67435	9636877	-	L1MB4		L1
AL357293.16	67461	67550	9636874	-	L4_A_Mam	RTE-X	LINE
AL357293.16	68320	68423	9636878	+	L2a		L2
AL357293.16	68913	69303	9636878	+	L2a		L2
AL357293.16	69309	69449	9636879	+	L1ME4a		L1
AL357293.16	70090	70388	9636880	-	AluSx	Alu	SINE
AL357293.16	70488	71013	9636881	-	L2a		L2
AL357293.16	71025	71530	9636882	-	L2	L2	LINE
AL357293.16	71531	71713	9636883	+	L1MC4		L1
AL357293.16	71711	71776	9636884	+	L1MC4		L1
AL357293.16	71822	72059	9636882	-	L2	L2	LINE
AL357293.16	72122	72600	9636885	+	LTR16A2	ERVL	LTR
AL357293.16	72968	73011	9636886	+	AT_rich		Low_complexity
AL357293.16	73227	73443	9636887	+	L2	L2	LINE
AL357293.16	73450	73499	9636888	+	L3	CR1	LINE
AL357293.16	73500	73835	9636889	-	MLT1D	ERVL-MaLR	LTR
AL357293.16	73796	74093	9636890	+	LTR33	ERVL	LTR
AL357293.16	74102	74206	9636891	+	MER81	hAT-Blackjack	DNA
AL357293.16	74359	74713	9636881	-	L2a		L2
AL357293.16	75591	75955	9636892	-	MLT1A0	ERVL-MaLR	LTR
AL357293.16	75982	76851	9636893	-	L1PA16		L1
AL357293.16	76844	77051	9636893	-	L1PA16		L1
AL357293.16	77052	77360	9636894	-	AluSx	Alu	SINE
AL357293.16	77361	77624	9636893	-	L1PA16		L1
AL357293.16	77996	78475	9636895	-	L1MB3		L1
AL357293.16	78569	78988	9636896	-	LTR16A2	ERVL	LTR
AL357293.16	78989	79056	9636897	-	L1M1		L1
AL357293.16	79201	79759	9636898	+	MLT2B3	ERVL	LTR
AL357293.16	80942	81080	9636899	-	MIR	MIR	SINE
AL357293.16	81439	82076	9636900	-	LTR78	ERV1	LTR
AL357293.16	82159	82698	9636901	-	LTR67B	ERVL	LTR
AL357293.16	82748	82970	9636902	+	MLT1L	ERVL-MaLR	LTR
AL357293.16	82990	83139	9636903	+	L2a		L2
AL357293.16	83208	85449	9636904	+	L1ME1		L1
AL357293.16	85667	85879	9636905	+	L1M5		L1
AL357293.16	86008	86242	9636906	+	Charlie21a	hAT-Charlie	DNA
AL357293.16	86243	89592	9636907	+	L1PA5		L1
AL357293.16	89599	89864	9636908	+	Charlie21a	hAT-Charlie	DNA
AL357293.16	89900	90112	9636909	+	Charlie21a	hAT-Charlie	DNA
AL357293.16	90125	90159	9636910	+	T-rich
AL357293.16	90275	90317	9636911	+	AT_rich		Low_complexity
AL357293.16	90439	90455	9636912	+	MER3	hAT-Charlie	DNA
AL357293.16	90456	90651	9636913	-	MER3	hAT-Charlie	DNA
AL357293.16	90774	90819	9636914	+	L2c		L2
AL357293.16	90934	91070	9636915	-	MIRc	MIR	SINE
AL357293.16	91799	91824	9636916	+	(TG)n
AL357293.16	91886	92128	9636917	-	MLT1K	ERVL-MaLR	LTR
AL357293.16	92129	92433	9636918	-	AluY	Alu	SINE
AL357293.16	92434	92753	9636917	-	MLT1K	ERVL-MaLR	LTR
AL357293.16	92772	92803	9636919	+	(TG)n
AL357293.16	94868	95563	9636920	-	L3	CR1	LINE
AL357293.16	95682	95702	9636921	+	(A)n		Simple_repeat
AL357293.16	95729	95758	9636922	+	AT_rich		Low_complexity
AL357293.16	95928	96238	9636923	-	AluSx	Alu	SINE
AL357293.16	96646	97010	9636924	+	LTR16	ERVL	LTR
AL357293.16	97078	97665	9636925	+	HERV16-int		ERVL
AL357293.16	97966	98000	9636926	+	MIR	MIR	SINE
AL357293.16	98127	98156	9636927	+	AT_rich		Low_complexity
AL357293.16	98162	98385	9636928	-	AluJb	Alu	SINE
AL357293.16	99300	99354	9636929	-	MER20	hAT-Charlie	DNA
AL357293.16	99660	99741	9636930	+	L2b		L2
AL357293.16	99796	99880	9636931	+	L2b		L2
AL357293.16	100225	100401	9636932	+	MIRb	MIR	SINE
AL357293.16	100530	100562	9636933	+	AT_rich		Low_complexity
AL357293.16	100823	101014	9636934	+	MIR	MIR	SINE
AL357293.16	101639	101713	9636935	+	L2a		L2
AL357293.16	101745	101824	9636936	-	FRAM	Alu	SINE
AL357293.16	101903	101955	9636937	+	(TC)n
AL357293.16	102161	102188	9636938	+	(CAAAA)n		Simple_repeat
AL357293.16	102323	102726	9636939	-	L2	L2	LINE
AL357293.16	103172	103613	9636935	+	L2a		L2
AL357293.16	15404	15410	104512923	N	DUST
AL357293.16	15711	15717	104512924	N	DUST
AL357293.16	15884	15890	104512925	N	DUST
AL357293.16	17489	17495	104512926	N	DUST
AL357293.16	14768	14795	104512922	N	DUST
AL357293.16	14602	14617	104512921	N	DUST
AL357293.16	14095	14103	104512920	N	DUST
AL357293.16	13940	13998	104512919	N	DUST
AL357293.16	13529	13535	104512918	N	DUST
AL357293.16	13290	13302	104512917	N	DUST
AL357293.16	13219	13225	104512916	N	DUST
AL357293.16	10894	10962	104512915	N	DUST
AL357293.16	9935	9949	104512914	N	DUST
AL357293.16	8716	8780	104512913	N	DUST
AL357293.16	8579	8585	104512912	N	DUST
AL357293.16	8371	8436	104512911	N	DUST
AL357293.16	27232	27337	104512939	N	DUST
AL357293.16	31877	31883	104512940	N	DUST
AL357293.16	34159	34165	104512941	N	DUST
AL357293.16	34430	34448	104512942	N	DUST
AL357293.16	35892	35904	104512943	N	DUST
AL357293.16	37895	37967	104512944	N	DUST
AL357293.16	38595	38602	104512945	N	DUST
AL357293.16	38619	38629	104512946	N	DUST
AL357293.16	38711	38717	104512947	N	DUST
AL357293.16	40066	40117	104512948	N	DUST
AL357293.16	40856	40862	104512949	N	DUST
AL357293.16	40942	40948	104512950	N	DUST
AL357293.16	41023	41029	104512951	N	DUST
AL357293.16	42202	42208	104512952	N	DUST
AL357293.16	42563	42569	104512953	N	DUST
AL357293.16	42634	42664	104512954	N	DUST
AL357293.16	43044	43050	104512955	N	DUST
AL357293.16	43260	43317	104512956	N	DUST
AL357293.16	45080	45161	104512957	N	DUST
AL357293.16	45511	45517	104512958	N	DUST
AL357293.16	46094	46100	104512959	N	DUST
AL357293.16	46775	46781	104512960	N	DUST
AL357293.16	46820	46826	104512961	N	DUST
AL357293.16	47536	47544	104512962	N	DUST
AL357293.16	47858	47873	104512963	N	DUST
AL357293.16	48128	48135	104512964	N	DUST
AL357293.16	48192	48251	104512965	N	DUST
AL357293.16	48322	48539	104512966	N	DUST
AL357293.16	48564	48627	104512967	N	DUST
AL357293.16	48656	48692	104512968	N	DUST
AL357293.16	49516	49522	104512969	N	DUST
AL357293.16	49831	49953	104512970	N	DUST
AL357293.16	7901	7942	104512910	N	DUST
AL357293.16	6821	6829	104512909	N	DUST
AL357293.16	6669	6690	104512908	N	DUST
AL357293.16	6357	6368	104512907	N	DUST
AL357293.16	5877	5924	104512906	N	DUST
AL357293.16	5391	5484	104512905	N	DUST
AL357293.16	4386	4393	104512904	N	DUST
AL357293.16	4173	4197	104512903	N	DUST
AL357293.16	3429	3460	104512902	N	DUST
AL357293.16	3239	3246	104512901	N	DUST
AL357293.16	2202	2218	104512900	N	DUST
AL357293.16	586	593	104512899	N	DUST
AL357293.16	18191	18203	104512927	N	DUST
AL357293.16	18340	18348	104512928	N	DUST
AL357293.16	21039	21046	104512929	N	DUST
AL357293.16	22011	22017	104512930	N	DUST
AL357293.16	22211	22239	104512931	N	DUST
AL357293.16	23100	23204	104512932	N	DUST
AL357293.16	23852	23866	104512933	N	DUST
AL357293.16	23895	24009	104512934	N	DUST
AL357293.16	24744	24750	104512935	N	DUST
AL357293.16	24792	24798	104512936	N	DUST
AL357293.16	26090	26141	104512937	N	DUST
AL357293.16	26275	26331	104512938	N	DUST
AL357293.16	50047	50080	104512971	N	DUST
AL357293.16	50483	50505	104512972	N	DUST
AL357293.16	51380	51418	104512973	N	DUST
AL357293.16	51588	51595	104512974	N	DUST
AL357293.16	51618	51624	104512975	N	DUST
AL357293.16	51636	51700	104512976	N	DUST
AL357293.16	52429	52436	104512977	N	DUST
AL357293.16	52634	52640	104512978	N	DUST
AL357293.16	52835	52857	104512979	N	DUST
AL357293.16	53507	53576	104512980	N	DUST
AL357293.16	54033	54039	104512981	N	DUST
AL357293.16	54269	54277	104512982	N	DUST
AL357293.16	56291	56310	104512983	N	DUST
AL357293.16	56753	56774	104512984	N	DUST
AL357293.16	57379	57388	104512985	N	DUST
AL357293.16	58381	58387	104512986	N	DUST
AL357293.16	58945	58951	104512987	N	DUST
AL357293.16	61410	61416	104512988	N	DUST
AL357293.16	61927	61946	104512989	N	DUST
AL357293.16	62500	62547	104512990	N	DUST
AL357293.16	63013	63032	104512991	N	DUST
AL357293.16	63371	63377	104512992	N	DUST
AL357293.16	64091	64097	104512993	N	DUST
AL357293.16	64388	64482	104512994	N	DUST
AL357293.16	65929	66016	104512995	N	DUST
AL357293.16	66402	66409	104512996	N	DUST
AL357293.16	67452	67458	104512997	N	DUST
AL357293.16	68085	68091	104512998	N	DUST
AL357293.16	68249	68255	104512999	N	DUST
AL357293.16	68309	68318	104513000	N	DUST
AL357293.16	68729	68735	104513001	N	DUST
AL357293.16	69056	69062	104513002	N	DUST
AL357293.16	70016	70023	104513003	N	DUST
AL357293.16	70031	70037	104513004	N	DUST
AL357293.16	70090	70105	104513005	N	DUST
AL357293.16	71759	71770	104513006	N	DUST
AL357293.16	71780	71788	104513007	N	DUST
AL357293.16	72006	72013	104513008	N	DUST
AL357293.16	72477	72485	104513009	N	DUST
AL357293.16	72943	73011	104513010	N	DUST
AL357293.16	73644	73650	104513011	N	DUST
AL357293.16	74246	74254	104513012	N	DUST
AL357293.16	74492	74545	104513013	N	DUST
AL357293.16	75957	75997	104513014	N	DUST
AL357293.16	76786	76792	104513015	N	DUST
AL357293.16	77052	77076	104513016	N	DUST
AL357293.16	77974	77981	104513017	N	DUST
AL357293.16	78486	78498	104513018	N	DUST
AL357293.16	82930	82937	104513019	N	DUST
AL357293.16	83647	83654	104513020	N	DUST
AL357293.16	83798	83862	104513021	N	DUST
AL357293.16	83948	83954	104513022	N	DUST
AL357293.16	84322	84328	104513023	N	DUST
AL357293.16	84488	84495	104513024	N	DUST
AL357293.16	84516	84615	104513025	N	DUST
AL357293.16	85450	85514	104513026	N	DUST
AL357293.16	85921	85937	104513027	N	DUST
AL357293.16	86948	86954	104513028	N	DUST
AL357293.16	87121	87127	104513029	N	DUST
AL357293.16	88735	88742	104513030	N	DUST
AL357293.16	88826	88832	104513031	N	DUST
AL357293.16	90125	90166	104513032	N	DUST
AL357293.16	90275	90317	104513033	N	DUST
AL357293.16	90833	90839	104513034	N	DUST
AL357293.16	91799	91824	104513035	N	DUST
AL357293.16	92058	92079	104513036	N	DUST
AL357293.16	92137	92144	104513037	N	DUST
AL357293.16	92298	92307	104513038	N	DUST
AL357293.16	92772	92803	104513039	N	DUST
AL357293.16	93337	93344	104513040	N	DUST
AL357293.16	95510	95518	104513041	N	DUST
AL357293.16	95682	95758	104513042	N	DUST
AL357293.16	95873	95879	104513043	N	DUST
AL357293.16	95905	95953	104513044	N	DUST
AL357293.16	96111	96117	104513045	N	DUST
AL357293.16	97924	97930	104513046	N	DUST
AL357293.16	98128	98182	104513047	N	DUST
AL357293.16	98323	98329	104513048	N	DUST
AL357293.16	99161	99169	104513049	N	DUST
AL357293.16	100921	100927	104513050	N	DUST
AL357293.16	101903	101955	104513051	N	DUST
AL357293.16	102093	102099	104513052	N	DUST
AL357293.16	102154	102221	104513053	N	DUST
AL162395.15	16709	16823	10284029	-	MIR	MIR	SINE
AL162395.15	17417	17515	10284030	-	MIR	MIR	SINE
AL162395.15	17483	17642	10284031	-	L2b		L2
AL162395.15	17655	17806	10284032	-	MIRb	MIR	SINE
AL162395.15	18212	18511	10284033	+	AluSx	Alu	SINE
AL162395.15	18526	18836	10284034	+	AluSx	Alu	SINE
AL162395.15	18943	19273	10284035	+	L2a		L2
AL162395.15	19308	19477	10284036	-	L1ME3Cz		L1
AL162395.15	19761	19789	10284037	+	(CGGGGG)n		Simple_repeat
AL162395.15	21176	21472	10284038	-	AluSx	Alu	SINE
AL162395.15	22165	22378	10284039	+	MIRb	MIR	SINE
AL162395.15	22596	22666	10284040	-	L2b		L2
AL162395.15	22968	23048	10284041	+	MIR	MIR	SINE
AL162395.15	23450	23470	10284042	+	AT_rich		Low_complexity
AL162395.15	23979	24236	10284043	-	L1PA13		L1
AL162395.15	24475	24667	10284044	-	MER63A	hAT-Blackjack	DNA
AL162395.15	24685	24710	10284045	+	AT_rich		Low_complexity
AL162395.15	24803	24915	10284046	-	L1MA4		L1
AL162395.15	24976	25040	10284047	+	(CATATA)n		Simple_repeat
AL162395.15	25786	25952	10284048	-	MER45A	hAT-Tip100	DNA
AL162395.15	25953	26263	10284049	-	AluSx	Alu	SINE
AL162395.15	26264	26333	10284048	-	MER45A	hAT-Tip100	DNA
AL162395.15	27390	27743	10284050	+	L2c		L2
AL162395.15	27756	27829	10284051	+	LTR32	ERVL	LTR
AL162395.15	27813	27869	10284051	+	LTR32	ERVL	LTR
AL162395.15	27885	28108	10284051	+	LTR32	ERVL	LTR
AL162395.15	28117	29361	10284051	+	HERVL32-int		ERVL
AL162395.15	29749	29869	10284052	+	PRIMA41-int	ERV1	LTR
AL162395.15	29864	30042	10284051	+	HERVL32-int		ERVL
AL162395.15	30044	30117	10284051	+	LTR32	ERVL	LTR
AL162395.15	30141	30468	10284053	+	AluJb	Alu	SINE
AL162395.15	30499	30716	10284051	+	LTR32	ERVL	LTR
AL162395.15	30830	31364	10284054	+	MLT2A2	ERVL	LTR
AL162395.15	16532	16696	10284028	+	MIR	MIR	SINE
AL162395.15	14970	15131	10284027	-	MIRb	MIR	SINE
AL162395.15	13643	13849	10284026	+	L2c		L2
AL162395.15	13043	13536	10284025	+	LTR16D2	ERVL	LTR
AL162395.15	12181	12404	10284024	+	MIRb	MIR	SINE
AL162395.15	11897	12060	10284023	+	X7A_LINE	CR1	LINE
AL162395.15	11751	11850	10284022	-	MIRc	MIR	SINE
AL162395.15	9849	9936	10284018	+	L2c		L2
AL162395.15	9665	9735	10284021	+	L2	L2	LINE
AL162395.15	9228	9428	10284020	+	MIR	MIR	SINE
AL162395.15	9045	9210	10284019	-	MER5B	hAT-Charlie	DNA
AL162395.15	8916	9016	10284018	+	L2c		L2
AL162395.15	8701	8869	10284018	+	L2c		L2
AL162395.15	7895	8055	10284017	-	MER105	hAT-Charlie	DNA
AL162395.15	7299	7680	10284016	+	MER57B1	ERV1	LTR
AL162395.15	4838	7298	10284016	+	MER57-int	ERV1	LTR
AL162395.15	4045	4836	10284014	-	L1MA8		L1
AL162395.15	3739	4044	10284015	-	AluJb	Alu	SINE
AL162395.15	3563	3738	10284014	-	L1MA8		L1
AL162395.15	3204	3505	10284013	-	L1PA10		L1
AL162395.15	3183	3203	10284012	+	AT_rich		Low_complexity
AL162395.15	2385	2874	10284011	-	L1MEd		L1
AL162395.15	1938	2381	10284010	-	L1MCc		L1
AL162395.15	576	1017	10284009	+	L2a		L2
AL162395.15	32284	32400	10284055	-	MIR	MIR	SINE
AL162395.15	32450	32546	10284056	-	MIRc	MIR	SINE
AL162395.15	32569	32793	10284057	-	MIRb	MIR	SINE
AL162395.15	32885	33077	10284058	+	LTR33B	ERVL	LTR
AL162395.15	33088	33548	10284059	+	L2a		L2
AL162395.15	33877	34047	10284060	-	MER97a	hAT-Tip100	DNA
AL162395.15	34290	34818	10284061	-	MLT1F2	ERVL-MaLR	LTR
AL162395.15	34851	35055	10284062	-	L1M6B		L1
AL162395.15	35073	35259	10284063	-	L1M6		L1
AL162395.15	35414	35708	10284064	+	LTR16C	ERVL	LTR
AL162395.15	35846	35974	10284065	-	L1PREC2		L1
AL162395.15	35975	36293	10284066	-	AluSx	Alu	SINE
AL162395.15	36294	36993	10284065	-	L1PREC2		L1
AL162395.15	36997	37581	10284067	+	L1PREC2		L1
AL162395.15	37867	38222	10284068	+	THE1C	ERVL-MaLR	LTR
AL162395.15	38223	39709	10284068	+	THE1C-int		ERVL-MaLR
AL162395.15	39710	40064	10284068	+	THE1C	ERVL-MaLR	LTR
AL162395.15	40065	40454	10284063	-	L1M6		L1
AL162395.15	40455	40937	10284069	-	MLT2B1	ERVL	LTR
AL162395.15	40938	41102	10284063	-	L1M6		L1
AL162395.15	41214	41269	10284063	-	L1M6		L1
AL162395.15	41413	41692	10284063	-	L1M6		L1
AL162395.15	42297	42541	10284070	+	AluY	Alu	SINE
AL162395.15	42719	42881	10284071	+	MER63A	hAT-Blackjack	DNA
AL162395.15	43884	43983	10284072	-	MER5A1	hAT-Charlie	DNA
AL162395.15	44380	44423	10284073	+	L2b		L2
AL162395.15	45118	45182	10284074	+	Helitron1Na_Mam	Helitron	RC
AL162395.15	45236	45456	10284075	-	MIR	MIR	SINE
AL162395.15	45457	45647	10284076	-	MER3	hAT-Charlie	DNA
AL162395.15	45759	45796	10284077	+	A-rich
AL162395.15	46341	46430	10284078	-	MIR	MIR	SINE
AL162395.15	46462	46684	10284079	-	L1PA16		L1
AL162395.15	46727	47038	10284080	-	AluJb	Alu	SINE
AL162395.15	47187	48647	10284081	-	L1PA16		L1
AL162395.15	48648	49077	10284082	-	L1PA3		L1
AL162395.15	49078	49601	10284081	-	L1PA16		L1
AL162395.15	49603	49737	10284083	-	AluSx	Alu	SINE
AL162395.15	49738	50047	10284081	-	L1PA16		L1
AL162395.15	50048	50432	10284084	+	MSTA	ERVL-MaLR	LTR
AL162395.15	50433	50933	10284081	-	L1PA16		L1
AL162395.15	50943	51210	10284081	-	L1PA16		L1
AL162395.15	51250	51635	10284081	-	L1PA16		L1
AL162395.15	52173	52870	10284081	-	L1PA16		L1
AL162395.15	52982	53238	10284085	+	Helitron1Nb_Mam	Helitron	RC
AL162395.15	53242	53426	10284086	+	Helitron1Na_Mam	Helitron	RC
AL162395.15	54369	54418	10284087	+	AT_rich		Low_complexity
AL162395.15	55624	58941	10284088	-	L1MA8		L1
AL162395.15	59719	59880	10284089	+	Tigger1	TcMar-Tigger	DNA
AL162395.15	59877	60087	10284090	+	Tigger1	TcMar-Tigger	DNA
AL162395.15	60090	60127	10284091	-	L2a		L2
AL162395.15	60369	60678	10284092	-	AluJb	Alu	SINE
AL162395.15	60951	61032	10284093	-	MER47A	TcMar-Tigger	DNA
AL162395.15	61023	61090	10284093	+	MER47A	TcMar-Tigger	DNA
AL162395.15	61091	61170	10284093	-	MER47A	TcMar-Tigger	DNA
AL162395.15	62635	62818	10284094	-	MIRb	MIR	SINE
AL162395.15	3184	3219	104503284	N	DUST
AL162395.15	3506	3512	104503285	N	DUST
AL162395.15	3692	3698	104503286	N	DUST
AL162395.15	3739	3758	104503287	N	DUST
AL162395.15	3908	3925	104503288	N	DUST
AL162395.15	4588	4600	104503289	N	DUST
AL162395.15	4800	4806	104503290	N	DUST
AL162395.15	5295	5304	104503291	N	DUST
AL162395.15	5901	5907	104503292	N	DUST
AL162395.15	8708	8714	104503293	N	DUST
AL162395.15	9950	9956	104503294	N	DUST
AL162395.15	10806	10834	104503295	N	DUST
AL162395.15	10921	10927	104503296	N	DUST
AL162395.15	10944	10979	104503297	N	DUST
AL162395.15	12132	12155	104503298	N	DUST
AL162395.15	12434	12441	104503299	N	DUST
AL162395.15	12454	12460	104503300	N	DUST
AL162395.15	14108	14114	104503301	N	DUST
AL162395.15	17319	17325	104503302	N	DUST
AL162395.15	17648	17654	104503303	N	DUST
AL162395.15	18052	18058	104503304	N	DUST
AL162395.15	18490	18511	104503305	N	DUST
AL162395.15	18808	18854	104503306	N	DUST
AL162395.15	19039	19079	104503307	N	DUST
AL162395.15	19174	19192	104503308	N	DUST
AL162395.15	19431	19439	104503309	N	DUST
AL162395.15	19759	19790	104503310	N	DUST
AL162395.15	21181	21196	104503311	N	DUST
AL162395.15	21346	21354	104503312	N	DUST
AL162395.15	23090	23152	104503313	N	DUST
AL162395.15	23979	23997	104503314	N	DUST
AL162395.15	24685	24710	104503315	N	DUST
AL162395.15	24937	25037	104503316	N	DUST
AL162395.15	25254	25267	104503317	N	DUST
AL162395.15	25397	25414	104503318	N	DUST
AL162395.15	25911	25981	104503319	N	DUST
AL162395.15	30268	30292	104503320	N	DUST
AL162395.15	30440	30503	104503321	N	DUST
AL162395.15	32269	32275	104503322	N	DUST
AL162395.15	33058	33064	104503323	N	DUST
AL162395.15	34374	34383	104503324	N	DUST
AL162395.15	34988	34994	104503325	N	DUST
AL162395.15	35974	35995	104503326	N	DUST
AL162395.15	36145	36166	104503327	N	DUST
AL162395.15	36301	36316	104503328	N	DUST
AL162395.15	37087	37093	104503329	N	DUST
AL162395.15	37353	37359	104503330	N	DUST
AL162395.15	38666	38677	104503331	N	DUST
AL162395.15	40297	40303	104503332	N	DUST
AL162395.15	40365	40421	104503333	N	DUST
AL162395.15	40497	40548	104503334	N	DUST
AL162395.15	40920	40926	104503335	N	DUST
AL162395.15	42547	42569	104503336	N	DUST
AL162395.15	43203	43209	104503337	N	DUST
AL162395.15	44983	44995	104503338	N	DUST
AL162395.15	45744	45798	104503339	N	DUST
AL162395.15	46211	46217	104503340	N	DUST
AL162395.15	46291	46349	104503341	N	DUST
AL162395.15	46698	46751	104503342	N	DUST
AL162395.15	46904	46917	104503343	N	DUST
AL162395.15	47171	47204	104503344	N	DUST
AL162395.15	47650	47714	104503345	N	DUST
AL162395.15	47723	47731	104503346	N	DUST
AL162395.15	48178	48186	104503347	N	DUST
AL162395.15	48604	48675	104503348	N	DUST
AL162395.15	48786	48807	104503349	N	DUST
AL162395.15	49094	49148	104503350	N	DUST
AL162395.15	50525	50531	104503351	N	DUST
AL162395.15	50533	50539	104503352	N	DUST
AL162395.15	54360	54418	104503353	N	DUST
AL162395.15	54957	54963	104503354	N	DUST
AL162395.15	55275	55296	104503355	N	DUST
AL162395.15	55575	55633	104503356	N	DUST
AL162395.15	56362	56368	104503357	N	DUST
AL162395.15	56739	56745	104503358	N	DUST
AL162395.15	57534	57541	104503359	N	DUST
AL162395.15	57890	57897	104503360	N	DUST
AL162395.15	58033	58041	104503361	N	DUST
AL162395.15	58085	58101	104503362	N	DUST
AL162395.15	58213	58219	104503363	N	DUST
AL162395.15	58452	58520	104503364	N	DUST
AL162395.15	58589	58680	104503365	N	DUST
AL162395.15	60373	60395	104503366	N	DUST
AL162395.15	61128	61134	104503367	N	DUST
AL162395.15	61813	61819	104503368	N	DUST

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Curator Links

Alignment for AL357293.16 and AL162395.15

Alignment Summary

Alignment 1 of 1