Alignment last updated: 11/11/2008 11:57:53
Join Legend
Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.
Alignment for AC016678.4 and AC015979.4
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AC016678.4 Homo sapiens BAC clone RP11-55O11 from Y, complete sequence [htgs_phase3]
Length: 142,982 bp
AC015979.4 Homo sapiens BAC clone RP11-538M13 from Y, complete sequence [htgs_phase3]
Length: 22,212 bp
Alignment Summary
Join evaluation: Alignment count: 1
|
| Type | Point1 | Point2 | Orient1 | Orient2 | Curator | Comment | Time | Id | Alignment | Releases |
| L | 142782 | 1 | + | + | chenhc | Taxid 9606 chrom Y Primary assembly | 2008-08-08 12:39:34.230 | 26553 | 36458 | GRCh38, GRCh37, Hs36 |
| A | 142982 | 201 | + | + | chenhc | Taxid 9606 chrom Y Primary assembly | 2008-11-11 11:57:53.880 | 51726 | 36458 |
Alignment 1 of 1
AC016678.4 : + : 142783..142982 AC015979.4 : + : 1..200 Mismatches = 0, Gaps = 0, Length = 200 Percent identity = 100% Score = 397 bits (200), Expect = 1.008e-110 0 BAC and 6 Fosmid bridging clones. 0 BAC and 6 Fosmid concordant clones. 0 BAC and 0 Fosmid discordant clones. AC016678.4 >142783 ctcagtcccccaagtagctgggaacacaggtgtgcactatcaggcctggtgaatttttgt 142842 AC015979.4 >1 ............................................................ 60 AC016678.4 >142843 atttttagtagagacaaggttttaccacgttggccaggctggtcttaaacttctgacctc 142902 AC015979.4 >61 ............................................................ 120 AC016678.4 >142903 cagttatccacctacatctgcctcccaaagtgcagagattacagattgagccaatgtacc 142962 AC015979.4 >121 ............................................................ 180 AC016678.4 >142963 agtccattctcagggaattc 142982 AC015979.4 >181 .................... 200
Events
| Id | Type | Date | Whodid | Comment |
| 55230 | InitHasAlign | 09/29/2006 19:46:14 | jcherry | blast parameters: -W 28 -r 1 -q -3 -e 1e-5 -Z 200 -F 'm L; R' bandwidths: 501 701 1001 5001 Toolkit wrapper version: built Thu Aug 17 17:58:09 EDT 2006 using /netopt/ncbi_tools/c++.by-date/production/20060730 Running blast for AC015979.4 and AC016678.4 Found 1 acceptable dovetail alignment(s) by blast -W 28 -r 1 -q -3 -e 1e-5 -Z 200 -F 'm L; R' |
| 137310 | CreateSwitchPt | 08/08/2008 12:39:34 | chenhc | From Hs build 36.1 agp files |
| 55231 | ReSetShortOvlp | 09/04/2008 10:31:48 | dbo | |
| 162483 | CreateSwitchPt | 11/11/2008 11:57:53 | chenhc | contig_builder 1.3 Toolkit wrapper version: built Nov 10 2008 using /netopt/ncbi_tools64/c++.by-date/20081110/GCC401-Release64/lib |
BAC Ends
| Clone | R | F | ||||
|---|---|---|---|---|---|---|
| Accession | %id | Position (strand) | Accession | %id | Position (strand) | |
| CTC-387K11 | AC015979.4 | 99.8% | pos 7995 (R+) | |||
| CTD-2291G21 | AC016678.4 | 99.18% | pos 87116 (R-) | |||
| CTD-2592B4 | AC016678.4 | 99.83% | pos 195 (F+) | |||
| CTD-2651C22 | AC015979.4 | 97.65% | pos 17503 (F+) | |||
| RP11-1140G2 | AC016678.4 | 98.06% | pos 15780 (R+) | |||
| RP11-166O22 | AC015979.4 | 100% | pos 2400 (F+) | |||
| RP11-351J17 | AC015979.4 | 97.86% | pos 2195 (R-) | |||
| RP11-360H3 | AC015979.4 | 99.78% | pos 2221 (F+) | |||
Fosmid Ends
| Clone | R | F | ||||
|---|---|---|---|---|---|---|
| Accession | %id | Position (strand) | Accession | %id | Position (strand) | |
| ABC8-2116540E6 | AC015979.4 | 99.86% | pos 10111 (R-) | AC016678.4 | 99.74% | pos 111041 (F+) |
| ABC8-2142340K23 | AC016678.4 | 99.69% | pos 26023 (F-) | |||
| ABC8-40859100K16 | AC016678.4 | 99.63% | pos 114062 (R+) | AC015979.4 | 99.87% | pos 12044 (F-) |
| ABC8-40862000N7 | AC015979.4 | 99.86% | pos 12804 (F+) | |||
| ABC8-40896100G8 | AC016678.4 | 99.87% | pos 15541 (R+) | AC016678.4 | 99.73% | pos 52104 (F-) |
| ABC8-40984100K14 | AC016678.4 | 99.66% | pos 131472 (F+) | |||
| ABC8-40992000D1 | AC016678.4 | 100% | pos 12677 (R+) | AC016678.4 | 99.85% | pos 49670 (F-) |
| ABC8-41058900M9 | AC016678.4 | 100% | pos 109126 (R-) | AC016678.4 | 97.43% | pos 74574 (F+) |
| ABC8-41092700A7 | AC015979.4 | 99.86% | pos 4515 (R-) | AC016678.4 | 99.69% | pos 112563 (F+) |
| ABC8-41108500G16 | AC016678.4 | 98.94% | pos 86586 (R+) | AC016678.4 | 99.69% | pos 124547 (F-) |
| ABC8-41118200I18 | AC015979.4 | 99.65% | pos 9536 (R-) | AC016678.4 | 99.64% | pos 115393 (F+) |
| ABC8-41132000E4 | AC016678.4 | 99.85% | pos 106414 (R+) | |||
| ABC8-41145800L18 | AC016678.4 | 99.01% | pos 7264 (F-) | |||
| ABC8-41217000K16 | AC016678.4 | 100% | pos 38981 (R-) | AC016678.4 | 99.86% | pos 1507 (F+) |
| ABC8-41234700M11 | AC016678.4 | 99.86% | pos 19801 (R-) | |||
| ABC8-41790400H14 | AC016678.4 | 99.73% | pos 15539 (R+) | AC016678.4 | 100% | pos 52105 (F-) |
| ABC8-41792500D5 | AC016678.4 | 99.74% | pos 97262 (R-) | AC016678.4 | 99.86% | pos 61633 (F+) |
| ABC8-42094400N24 | AC016678.4 | 99.28% | pos 23153 (R+) | AC016678.4 | 100% | pos 53508 (F-) |
| ABC8-43001200P11 | AC015979.4 | 100% | pos 15748 (F+) | |||
| ABC8-43016800F4 | AC016678.4 | 99.85% | pos 77130 (R+) | |||
| ABC8-43035700A15 | AC016678.4 | 99.82% | pos 47963 (F+) | |||
| ABC8-43257500C21 | AC016678.4 | 99.86% | pos 14874 (R-) | |||
| ABC8-45034400P6 | AC016678.4 | 99.84% | pos 13436 (R+) | AC016678.4 | 99.13% | pos 48928 (F-) |
| ABC8-45034900I12 | AC016678.4 | 99.65% | pos 115996 (R+) | AC015979.4 | 99.18% | pos 7418 (F-) |
| ABC8-45707600A6 | AC016678.4 | 100% | pos 106144 (F+) | |||
| ABC8-527313D9 | AC016678.4 | 100% | pos 60658 (R-) | AC016678.4 | 99.76% | pos 21378 (F+) |
| ABC8-5690449A8 | AC015979.4 | 97.78% | pos 3591 (F-) | |||
| ABC8-5691849A21 | AC016678.4 | 100% | pos 70114 (F+) | |||
| ABC8-5712249J19 | AC016678.4 | 98.17% | pos 80450 (R-) | AC016678.4 | 99.18% | pos 49786 (F+) |
| ABC8-5714649M13 | AC016678.4 | 99.83% | pos 111911 (F+) | |||
| ABC8-647522O7 | AC015979.4 | 99.87% | pos 16743 (F+) | |||
| ABC8-654022O6 | AC015979.4 | 99.62% | pos 9923 (R-) | AC016678.4 | 99.85% | pos 108865 (F+) |
| ABC8-703722N13 | AC016678.4 | 98.78% | pos 78992 (R+) | AC016678.4 | 99.49% | pos 116717 (F-) |
| ABC8-716122A21 | AC016678.4 | 99.86% | pos 123373 (F+) | |||
| ABC8-720740C13 | AC016678.4 | 100% | pos 1391 (F-) | |||
| ABC8-791522H3 | AC016678.4 | 100% | pos 34422 (F-) | |||
Repeats
| acc | start | stop | repeat id | strand | name | family | class |
|---|---|---|---|---|---|---|---|
| AC016678.4 | 18091 | 18123 | 8627120 | + | AT_rich | Low_complexity | |
| AC016678.4 | 18251 | 18468 | 8627121 | - | HAL1ME | L1 | LINE |
| AC016678.4 | 18597 | 18942 | 8627122 | - | L1MA4 | L1 | |
| AC016678.4 | 18943 | 19255 | 8627123 | - | AluSx | Alu | SINE |
| AC016678.4 | 19256 | 19714 | 8627122 | - | L1MA4 | L1 | |
| AC016678.4 | 19733 | 20025 | 8627124 | + | AluSx | Alu | SINE |
| AC016678.4 | 20378 | 20711 | 8627125 | - | AluY | Alu | SINE |
| AC016678.4 | 20933 | 21130 | 8627126 | + | Charlie2b | hAT-Charlie | DNA |
| AC016678.4 | 21131 | 21448 | 8627127 | - | AluSx | Alu | SINE |
| AC016678.4 | 21449 | 21918 | 8627126 | + | Charlie2b | hAT-Charlie | DNA |
| AC016678.4 | 21919 | 22180 | 8627128 | + | AluSx | Alu | SINE |
| AC016678.4 | 22181 | 22294 | 8627126 | + | Charlie2b | hAT-Charlie | DNA |
| AC016678.4 | 22570 | 28921 | 8627129 | - | L1PA7 | L1 | |
| AC016678.4 | 29292 | 29340 | 8627130 | + | AT_rich | Low_complexity | |
| AC016678.4 | 29458 | 29482 | 8627131 | + | AT_rich | Low_complexity | |
| AC016678.4 | 30072 | 30149 | 8627132 | - | MADE1 | TcMar-Mariner | DNA |
| AC016678.4 | 17257 | 17689 | 8627118 | - | L1PB3 | L1 | |
| AC016678.4 | 16951 | 17256 | 8627119 | - | AluSx | Alu | SINE |
| AC016678.4 | 16336 | 16950 | 8627118 | - | L1PB3 | L1 | |
| AC016678.4 | 13857 | 14284 | 8627117 | + | (TA)n | Simple_repeat | |
| AC016678.4 | 13742 | 13893 | 8627116 | + | (TATATG)n | ||
| AC016678.4 | 13576 | 13713 | 8627115 | - | MLT2B4 | ERVL | LTR |
| AC016678.4 | 13280 | 13387 | 8627112 | + | MLT2C2 | ERVL | LTR |
| AC016678.4 | 9597 | 13277 | 8627113 | - | L1PA7 | L1 | |
| AC016678.4 | 9448 | 9596 | 8627114 | + | AluY | Alu | SINE |
| AC016678.4 | 7430 | 9447 | 8627113 | - | L1PA7 | L1 | |
| AC016678.4 | 7074 | 7425 | 8627112 | + | MLT2C2 | ERVL | LTR |
| AC016678.4 | 6699 | 7057 | 8627111 | - | MLT1A0 | ERVL-MaLR | LTR |
| AC016678.4 | 35712 | 35891 | 8627144 | + | (TTTC)n | ||
| AC016678.4 | 35892 | 36023 | 8627145 | - | AluJb | Alu | SINE |
| AC016678.4 | 36065 | 37440 | 8627146 | - | L1PA15 | L1 | |
| AC016678.4 | 37441 | 37500 | 8627146 | - | L1PA15 | L1 | |
| AC016678.4 | 37492 | 43659 | 8627147 | + | L1PA5 | L1 | |
| AC016678.4 | 43657 | 44374 | 8627146 | - | L1PA15 | L1 | |
| AC016678.4 | 44455 | 44904 | 8627139 | + | L2 | L2 | LINE |
| AC016678.4 | 46726 | 46788 | 8627148 | + | (TCTA)n | ||
| AC016678.4 | 46789 | 47091 | 8627149 | - | AluSx | Alu | SINE |
| AC016678.4 | 47092 | 47192 | 8627150 | + | (TCTA)n | ||
| AC016678.4 | 47291 | 47552 | 8627151 | + | (TCTA)n | ||
| AC016678.4 | 47618 | 47643 | 8627152 | + | (TC)n | ||
| AC016678.4 | 48075 | 48169 | 8627153 | + | (CATTT)n | Simple_repeat | |
| AC016678.4 | 49587 | 49611 | 8627154 | + | AT_rich | Low_complexity | |
| AC016678.4 | 49589 | 49659 | 8627155 | + | AT_rich | Low_complexity | |
| AC016678.4 | 50239 | 50367 | 8627156 | + | CT-rich | ||
| AC016678.4 | 50388 | 50557 | 8627156 | + | CT-rich | ||
| AC016678.4 | 50616 | 50878 | 8627157 | - | AluJb | Alu | SINE |
| AC016678.4 | 51543 | 51619 | 8627158 | + | (TCTA)n | ||
| AC016678.4 | 52354 | 52949 | 8627159 | - | L1MA4 | L1 | |
| AC016678.4 | 53127 | 53311 | 8627160 | - | L1M1 | L1 | |
| AC016678.4 | 53705 | 54007 | 8627161 | + | AluSx | Alu | SINE |
| AC016678.4 | 54020 | 54196 | 8627162 | + | (GAAA)n | Simple_repeat | |
| AC016678.4 | 54197 | 54246 | 8627163 | + | (GGAA)n | Simple_repeat | |
| AC016678.4 | 54255 | 54283 | 8627164 | + | (CAAG)n | Simple_repeat | |
| AC016678.4 | 54296 | 54345 | 8627165 | + | LTR16 | ERVL | LTR |
| AC016678.4 | 54438 | 54737 | 8627166 | - | AluY | Alu | SINE |
| AC016678.4 | 54740 | 55042 | 8627167 | - | AluY | Alu | SINE |
| AC016678.4 | 55075 | 55131 | 8627168 | - | MLT1B | ERVL-MaLR | LTR |
| AC016678.4 | 55219 | 55439 | 8627169 | - | MLT1B | ERVL-MaLR | LTR |
| AC016678.4 | 55440 | 55749 | 8627170 | - | AluJb | Alu | SINE |
| AC016678.4 | 55750 | 55761 | 8627169 | - | MLT1B | ERVL-MaLR | LTR |
| AC016678.4 | 5430 | 5599 | 8627110 | + | (TGGA)n | Simple_repeat | |
| AC016678.4 | 5256 | 5480 | 8627109 | + | (TAGA)n | Simple_repeat | |
| AC016678.4 | 5077 | 5252 | 8627109 | + | (TAGA)n | Simple_repeat | |
| AC016678.4 | 5013 | 5050 | 8627108 | + | A-rich | ||
| AC016678.4 | 4970 | 5009 | 8627107 | + | (CATA)n | Simple_repeat | |
| AC016678.4 | 4550 | 4868 | 8627106 | + | AluY | Alu | SINE |
| AC016678.4 | 3983 | 4360 | 8627105 | + | MSTA | ERVL-MaLR | LTR |
| AC016678.4 | 2282 | 2567 | 8627104 | + | AluJb | Alu | SINE |
| AC016678.4 | 1962 | 2263 | 8627103 | + | AluY | Alu | SINE |
| AC016678.4 | 1326 | 1392 | 8627102 | + | FRAM | Alu | SINE |
| AC016678.4 | 780 | 1239 | 8627101 | - | LTR2 | ERV1 | LTR |
| AC016678.4 | 293 | 590 | 8627100 | - | AluJb | Alu | SINE |
| AC016678.4 | 30390 | 30747 | 8627133 | - | L2a | L2 | |
| AC016678.4 | 30895 | 31192 | 8627134 | - | AluSx | Alu | SINE |
| AC016678.4 | 32025 | 32052 | 8627135 | + | AT_rich | Low_complexity | |
| AC016678.4 | 32395 | 33602 | 8627136 | - | L1PA5 | L1 | |
| AC016678.4 | 33636 | 33686 | 8627137 | + | (TG)n | ||
| AC016678.4 | 34414 | 34556 | 8627138 | - | L1MA2 | L1 | |
| AC016678.4 | 34633 | 34920 | 8627139 | + | L2 | L2 | LINE |
| AC016678.4 | 34986 | 35176 | 8627140 | - | L1PB4 | L1 | |
| AC016678.4 | 35185 | 35317 | 8627141 | + | (GAAA)n | Simple_repeat | |
| AC016678.4 | 35309 | 35382 | 8627142 | + | G-rich | ||
| AC016678.4 | 35401 | 35566 | 8627140 | - | L1PB4 | L1 | |
| AC016678.4 | 35574 | 35705 | 8627143 | + | (TTCC)n | ||
| AC016678.4 | 55762 | 55869 | 8627171 | + | (TTTTA)n | ||
| AC016678.4 | 55870 | 56152 | 8627172 | - | AluY | Alu | SINE |
| AC016678.4 | 56153 | 56333 | 8627169 | - | MLT1B | ERVL-MaLR | LTR |
| AC016678.4 | 56481 | 56532 | 8627173 | + | AT_rich | Low_complexity | |
| AC016678.4 | 56644 | 56826 | 8627174 | + | (TCTA)n | ||
| AC016678.4 | 56868 | 56900 | 8627175 | + | (TATG)n | ||
| AC016678.4 | 56927 | 57169 | 8627176 | + | (TCTA)n | ||
| AC016678.4 | 57262 | 57753 | 8627177 | + | L1MA9 | L1 | |
| AC016678.4 | 58034 | 58162 | 8627178 | + | FLAM_C | Alu | SINE |
| AC016678.4 | 59142 | 59412 | 8627179 | + | AluJb | Alu | SINE |
| AC016678.4 | 60148 | 60327 | 8627180 | + | AluSx | Alu | SINE |
| AC016678.4 | 61037 | 61172 | 8627181 | - | FLAM_C | Alu | SINE |
| AC016678.4 | 61481 | 61546 | 8627182 | + | AT_rich | Low_complexity | |
| AC016678.4 | 61930 | 62098 | 8627183 | + | MIRb | MIR | SINE |
| AC016678.4 | 62169 | 62188 | 8627184 | + | (GA)n | Simple_repeat | |
| AC016678.4 | 63288 | 63446 | 8627185 | + | L1MA9 | L1 | |
| AC016678.4 | 63447 | 63476 | 8627186 | + | (CA)n | Simple_repeat | |
| AC016678.4 | 63477 | 63622 | 8627185 | + | L1MA9 | L1 | |
| AC016678.4 | 63983 | 66556 | 8627187 | + | L1P3 | L1 | |
| AC016678.4 | 66915 | 67290 | 8627188 | + | L1MC4 | L1 | |
| AC016678.4 | 67299 | 67403 | 8627189 | + | (TA)n | Simple_repeat | |
| AC016678.4 | 67517 | 67990 | 8627190 | + | MER1A | hAT-Charlie | DNA |
| AC016678.4 | 68055 | 68460 | 8627191 | - | L1PA15 | L1 | |
| AC016678.4 | 68486 | 69243 | 8627192 | - | L1PA11 | L1 | |
| AC016678.4 | 69587 | 69946 | 8627193 | + | MER1A | hAT-Charlie | DNA |
| AC016678.4 | 69947 | 69966 | 8627194 | + | (TAA)n | Simple_repeat | |
| AC016678.4 | 69967 | 70092 | 8627193 | + | MER1A | hAT-Charlie | DNA |
| AC016678.4 | 70746 | 71012 | 8627195 | - | L2 | L2 | LINE |
| AC016678.4 | 71085 | 71391 | 8627196 | - | MER44A | TcMar-Tigger | DNA |
| AC016678.4 | 71415 | 71609 | 8627197 | - | AluJb | Alu | SINE |
| AC016678.4 | 71610 | 71666 | 8627198 | + | (TG)n | ||
| AC016678.4 | 71667 | 71797 | 8627197 | - | AluJb | Alu | SINE |
| AC016678.4 | 74236 | 74439 | 8627199 | - | THE1B | ERVL-MaLR | LTR |
| AC016678.4 | 74573 | 74717 | 8627200 | + | MER4A1 | ERV1 | LTR |
| AC016678.4 | 74718 | 75067 | 8627201 | - | THE1A | ERVL-MaLR | LTR |
| AC016678.4 | 75068 | 75377 | 8627200 | + | MER4A1 | ERV1 | LTR |
| AC016678.4 | 76152 | 76231 | 8627202 | + | (TC)n | ||
| AC016678.4 | 76319 | 76397 | 8627203 | + | CT-rich | ||
| AC016678.4 | 77305 | 77463 | 8627204 | + | (TGGA)n | Simple_repeat | |
| AC016678.4 | 77475 | 77654 | 8627205 | + | (TAGA)n | Simple_repeat | |
| AC016678.4 | 77707 | 77734 | 8627206 | + | (TA)n | Simple_repeat | |
| AC016678.4 | 77735 | 77761 | 8627207 | + | (CA)n | Simple_repeat | |
| AC016678.4 | 78300 | 78365 | 8627208 | + | L1MA9 | L1 | |
| AC016678.4 | 78871 | 79037 | 8627209 | + | (TTATA)n | ||
| AC016678.4 | 79344 | 79430 | 8627210 | + | MER58A | hAT-Charlie | DNA |
| AC016678.4 | 79432 | 79544 | 8627211 | + | MER57B2 | ERV1 | LTR |
| AC016678.4 | 79545 | 79796 | 8627212 | - | AluJb | Alu | SINE |
| AC016678.4 | 79797 | 80000 | 8627211 | + | MER57B2 | ERV1 | LTR |
| AC016678.4 | 80002 | 80090 | 8627213 | + | MER58A | hAT-Charlie | DNA |
| AC016678.4 | 81745 | 81891 | 8627214 | + | MLT1H | ERVL-MaLR | LTR |
| AC016678.4 | 81892 | 82404 | 8627215 | + | MER1A | hAT-Charlie | DNA |
| AC016678.4 | 82405 | 82583 | 8627214 | + | MLT1H | ERVL-MaLR | LTR |
| AC016678.4 | 82752 | 82953 | 8627216 | + | MLT2B1 | ERVL | LTR |
| AC016678.4 | 82956 | 83614 | 8627217 | + | LTR8 | ERV1 | LTR |
| AC016678.4 | 83664 | 83844 | 8627216 | + | MLT2B1 | ERVL | LTR |
| AC016678.4 | 83846 | 83934 | 8627218 | - | FLAM_C | Alu | SINE |
| AC016678.4 | 83936 | 84059 | 8627219 | - | MER58A | hAT-Charlie | DNA |
| AC016678.4 | 84567 | 84828 | 8627220 | - | L1MEc | L1 | |
| AC016678.4 | 84859 | 85606 | 8627221 | + | MER4E1 | ERV1 | LTR |
| AC016678.4 | 85628 | 86033 | 8627222 | - | L1MC4 | L1 | |
| AC016678.4 | 86034 | 86576 | 8627223 | - | MER41A | ERV1 | LTR |
| AC016678.4 | 86577 | 86734 | 8627222 | - | L1MC4 | L1 | |
| AC016678.4 | 86735 | 87041 | 8627224 | - | AluJb | Alu | SINE |
| AC016678.4 | 87042 | 87234 | 8627222 | - | L1MC4 | L1 | |
| AC016678.4 | 87257 | 87560 | 8627225 | + | AluY | Alu | SINE |
| AC016678.4 | 87637 | 87780 | 8627226 | + | LTR1F1 | ERV1 | LTR |
| AC016678.4 | 87781 | 87984 | 8627227 | - | MER20 | hAT-Charlie | DNA |
| AC016678.4 | 88154 | 88200 | 8627228 | + | (TTCA)n | ||
| AC016678.4 | 88215 | 88489 | 8627229 | - | AluJb | Alu | SINE |
| AC016678.4 | 88537 | 88842 | 8627230 | - | L1MC5 | L1 | |
| AC016678.4 | 88843 | 89171 | 8627231 | - | AluSx | Alu | SINE |
| AC016678.4 | 89172 | 89403 | 8627230 | - | L1MC5 | L1 | |
| AC016678.4 | 89544 | 89641 | 8627232 | - | THE1B | ERVL-MaLR | LTR |
| AC016678.4 | 89643 | 89694 | 8627233 | - | MLT1A | ERVL-MaLR | LTR |
| AC016678.4 | 89984 | 90146 | 8627234 | - | LTR24C | ERV1 | LTR |
| AC016678.4 | 90147 | 90457 | 8627235 | + | AluY | Alu | SINE |
| AC016678.4 | 90458 | 90885 | 8627234 | - | LTR24C | ERV1 | LTR |
| AC016678.4 | 90886 | 91176 | 8627236 | + | AluSx | Alu | SINE |
| AC016678.4 | 91177 | 91208 | 8627234 | - | LTR24C | ERV1 | LTR |
| AC016678.4 | 91538 | 91803 | 8627237 | + | L1PA4 | L1 | |
| AC016678.4 | 92000 | 92335 | 8627238 | + | AluY | Alu | SINE |
| AC016678.4 | 92342 | 92593 | 8627239 | + | AluSx | Alu | SINE |
| AC016678.4 | 93005 | 93313 | 8627240 | + | MSTB1 | ERVL-MaLR | LTR |
| AC016678.4 | 93314 | 94116 | 8627241 | - | LTR1A1 | ERV1 | LTR |
| AC016678.4 | 94117 | 94193 | 8627240 | + | MSTB1 | ERVL-MaLR | LTR |
| AC016678.4 | 94195 | 94452 | 8627242 | + | AluSx | Alu | SINE |
| AC016678.4 | 95106 | 96462 | 8627243 | - | L1PA7 | L1 | |
| AC016678.4 | 96473 | 96505 | 8627244 | + | AT_rich | Low_complexity | |
| AC016678.4 | 97213 | 97519 | 8627245 | + | L1M5 | L1 | |
| AC016678.4 | 97586 | 97772 | 8627245 | + | L1M5 | L1 | |
| AC016678.4 | 97913 | 98036 | 8627245 | + | L1M5 | L1 | |
| AC016678.4 | 98090 | 98258 | 8627246 | + | L2a | L2 | |
| AC016678.4 | 98325 | 98463 | 8627247 | - | L1MA7 | L1 | |
| AC016678.4 | 98464 | 98556 | 8627246 | + | L2a | L2 | |
| AC016678.4 | 99310 | 99589 | 8627248 | - | AluSx | Alu | SINE |
| AC016678.4 | 100586 | 100719 | 8627249 | + | AluSx | Alu | SINE |
| AC016678.4 | 100720 | 101008 | 8627250 | + | AluY | Alu | SINE |
| AC016678.4 | 101012 | 101038 | 8627251 | + | (CAAA)n | Simple_repeat | |
| AC016678.4 | 101039 | 101186 | 8627249 | + | AluSx | Alu | SINE |
| AC016678.4 | 101189 | 101268 | 8627252 | + | (CAATA)n | Simple_repeat | |
| AC016678.4 | 102448 | 102505 | 8627253 | + | C-rich | ||
| AC016678.4 | 103137 | 103270 | 8627254 | - | MamGypLTR3a | Gypsy | LTR |
| AC016678.4 | 103531 | 103756 | 8627255 | - | AmnSINE1 | Deu | SINE |
| AC016678.4 | 103830 | 103872 | 8627256 | + | (CA)n | Simple_repeat | |
| AC016678.4 | 104029 | 104336 | 8627257 | + | AluSx | Alu | SINE |
| AC016678.4 | 104350 | 104472 | 8627258 | + | GA-rich | ||
| AC016678.4 | 104457 | 104534 | 8627259 | + | A-rich | ||
| AC016678.4 | 104539 | 104601 | 8627260 | + | G-rich | ||
| AC016678.4 | 104814 | 105073 | 8627261 | + | MamRep605 | LTR? | |
| AC016678.4 | 105703 | 105772 | 8627262 | - | L1MC | L1 | |
| AC016678.4 | 105817 | 105927 | 8627263 | - | FLAM_C | Alu | SINE |
| AC016678.4 | 105936 | 106314 | 8627264 | - | L1M5 | L1 | |
| AC016678.4 | 106337 | 106541 | 8627264 | - | L1M5 | L1 | |
| AC016678.4 | 106626 | 106713 | 8627265 | + | AT_rich | Low_complexity | |
| AC016678.4 | 106796 | 107264 | 8627266 | + | LTR2B | ERV1 | LTR |
| AC016678.4 | 107265 | 107646 | 8627266 | + | Harlequin-int | ERV1 | |
| AC016678.4 | 107642 | 107921 | 8627267 | + | HERVE_a-int | ERV1 | |
| AC016678.4 | 107922 | 107972 | 8627268 | + | (CAAAA)n | Simple_repeat | |
| AC016678.4 | 107973 | 114967 | 8627267 | + | HERVE_a-int | ERV1 | |
| AC016678.4 | 114968 | 115261 | 8627269 | + | AluY | Alu | SINE |
| AC016678.4 | 115262 | 115548 | 8627267 | + | HERVE_a-int | ERV1 | |
| AC016678.4 | 115549 | 116016 | 8627267 | + | LTR2B | ERV1 | LTR |
| AC016678.4 | 116090 | 116348 | 8627270 | + | AluJb | Alu | SINE |
| AC016678.4 | 116367 | 116532 | 8627271 | + | GA-rich | ||
| AC016678.4 | 116526 | 116623 | 8627272 | + | G-rich | ||
| AC016678.4 | 117021 | 117113 | 8627273 | + | AluSx | Alu | SINE |
| AC016678.4 | 117125 | 117189 | 8627274 | - | LTR8A | ERV1 | LTR |
| AC016678.4 | 117157 | 117602 | 8627274 | - | LTR8A | ERV1 | LTR |
| AC016678.4 | 117636 | 117709 | 8627275 | + | (TAGA)n | Simple_repeat | |
| AC016678.4 | 117849 | 118464 | 8627276 | + | PRIMA4_LTR | ERV1 | LTR |
| AC016678.4 | 119088 | 119383 | 8627277 | + | AluSx | Alu | SINE |
| AC016678.4 | 119412 | 119447 | 8627278 | + | AT_rich | Low_complexity | |
| AC016678.4 | 119492 | 120240 | 8627279 | + | L1PB1 | L1 | |
| AC016678.4 | 120332 | 120355 | 8627280 | + | AT_rich | Low_complexity | |
| AC016678.4 | 120372 | 120404 | 8627281 | + | (TA)n | Simple_repeat | |
| AC016678.4 | 121316 | 121567 | 8627282 | - | L1PB1 | L1 | |
| AC016678.4 | 121594 | 121648 | 8627283 | + | (TAGA)n | Simple_repeat | |
| AC016678.4 | 121665 | 121894 | 8627282 | - | L1PB1 | L1 | |
| AC016678.4 | 122507 | 122527 | 8627284 | + | AT_rich | Low_complexity | |
| AC016678.4 | 122530 | 122796 | 8627285 | + | AluY | Alu | SINE |
| AC016678.4 | 122854 | 122876 | 8627286 | + | (A)n | Simple_repeat | |
| AC016678.4 | 123545 | 123607 | 8627287 | + | L1MC4a | L1 | |
| AC016678.4 | 123605 | 123783 | 8627288 | + | L1M5 | L1 | |
| AC016678.4 | 125492 | 125669 | 8627289 | - | L1MB3 | L1 | |
| AC016678.4 | 125670 | 126341 | 8627290 | + | PABL_A | ERV1 | LTR |
| AC016678.4 | 126342 | 126854 | 8627289 | - | L1MB3 | L1 | |
| AC016678.4 | 126888 | 127199 | 8627291 | + | AluSx | Alu | SINE |
| AC016678.4 | 127237 | 127669 | 8627292 | - | LTR7 | ERV1 | LTR |
| AC016678.4 | 127705 | 127776 | 8627293 | + | (TG)n | ||
| AC016678.4 | 128143 | 128216 | 8627294 | - | L2c | L2 | |
| AC016678.4 | 128507 | 128807 | 8627295 | + | AluJb | Alu | SINE |
| AC016678.4 | 129198 | 129500 | 8627296 | - | AluSx | Alu | SINE |
| AC016678.4 | 129533 | 129711 | 8627297 | + | (TTCC)n | ||
| AC016678.4 | 129730 | 129801 | 8627297 | + | (TTCC)n | ||
| AC016678.4 | 129806 | 130059 | 8627298 | - | AluSx | Alu | SINE |
| AC016678.4 | 130406 | 133150 | 8627299 | - | L1HS | L1 | |
| AC016678.4 | 133151 | 133587 | 8627300 | + | L1PA3 | L1 | |
| AC016678.4 | 133588 | 133903 | 8627301 | + | AluY | Alu | SINE |
| AC016678.4 | 133904 | 135764 | 8627300 | + | L1PA3 | L1 | |
| AC016678.4 | 135899 | 135934 | 8627302 | + | (TG)n | ||
| AC016678.4 | 136119 | 136429 | 8627303 | - | AluJb | Alu | SINE |
| AC016678.4 | 136483 | 136665 | 8627304 | - | AluJb | Alu | SINE |
| AC016678.4 | 136700 | 136745 | 8627305 | + | (TTA)n | ||
| AC016678.4 | 136851 | 136909 | 8627306 | + | AT_rich | Low_complexity | |
| AC016678.4 | 137833 | 138897 | 8627307 | - | L1PA4 | L1 | |
| AC016678.4 | 138897 | 140345 | 8627307 | + | L1PA4 | L1 | |
| AC016678.4 | 140534 | 141057 | 8627308 | - | MLT1D | ERVL-MaLR | LTR |
| AC016678.4 | 141117 | 141624 | 8627309 | + | (ATG)n | ||
| AC016678.4 | 142194 | 142242 | 8627310 | + | AT_rich | Low_complexity | |
| AC016678.4 | 142281 | 142313 | 8627311 | + | (CA)n | Simple_repeat | |
| AC016678.4 | 142352 | 142689 | 8627312 | + | THE1B | ERVL-MaLR | LTR |
| AC016678.4 | 142690 | 142955 | 8627313 | - | AluSx | Alu | SINE |
| AC016678.4 | 47 | 54 | 102402386 | N | DUST | ||
| AC016678.4 | 293 | 300 | 102402387 | N | DUST | ||
| AC016678.4 | 1295 | 1304 | 102402388 | N | DUST | ||
| AC016678.4 | 1816 | 1826 | 102402389 | N | DUST | ||
| AC016678.4 | 2088 | 2096 | 102402390 | N | DUST | ||
| AC016678.4 | 2240 | 2265 | 102402391 | N | DUST | ||
| AC016678.4 | 2557 | 2567 | 102402392 | N | DUST | ||
| AC016678.4 | 2648 | 2717 | 102402393 | N | DUST | ||
| AC016678.4 | 3059 | 3072 | 102402394 | N | DUST | ||
| AC016678.4 | 4668 | 4683 | 102402395 | N | DUST | ||
| AC016678.4 | 4821 | 4868 | 102402396 | N | DUST | ||
| AC016678.4 | 4970 | 5056 | 102402397 | N | DUST | ||
| AC016678.4 | 5083 | 5183 | 102402398 | N | DUST | ||
| AC016678.4 | 5187 | 5349 | 102402399 | N | DUST | ||
| AC016678.4 | 5382 | 5508 | 102402400 | N | DUST | ||
| AC016678.4 | 5583 | 5689 | 102402401 | N | DUST | ||
| AC016678.4 | 7429 | 7439 | 102402402 | N | DUST | ||
| AC016678.4 | 8282 | 8288 | 102402403 | N | DUST | ||
| AC016678.4 | 8944 | 8950 | 102402404 | N | DUST | ||
| AC016678.4 | 9392 | 9398 | 102402405 | N | DUST | ||
| AC016678.4 | 9567 | 9591 | 102402406 | N | DUST | ||
| AC016678.4 | 10154 | 10160 | 102402407 | N | DUST | ||
| AC016678.4 | 10497 | 10503 | 102402408 | N | DUST | ||
| AC016678.4 | 11347 | 11417 | 102402409 | N | DUST | ||
| AC016678.4 | 12273 | 12279 | 102402410 | N | DUST | ||
| AC016678.4 | 12737 | 12744 | 102402411 | N | DUST | ||
| AC016678.4 | 13188 | 13194 | 102402412 | N | DUST | ||
| AC016678.4 | 13431 | 13438 | 102402413 | N | DUST | ||
| AC016678.4 | 13741 | 14281 | 102402414 | N | DUST | ||
| AC016678.4 | 14555 | 14561 | 102402415 | N | DUST | ||
| AC016678.4 | 15261 | 15267 | 102402416 | N | DUST | ||
| AC016678.4 | 16313 | 16343 | 102402417 | N | DUST | ||
| AC016678.4 | 16375 | 16381 | 102402418 | N | DUST | ||
| AC016678.4 | 16951 | 16977 | 102402419 | N | DUST | ||
| AC016678.4 | 17372 | 17378 | 102402420 | N | DUST | ||
| AC016678.4 | 17473 | 17480 | 102402421 | N | DUST | ||
| AC016678.4 | 17502 | 17511 | 102402422 | N | DUST | ||
| AC016678.4 | 17562 | 17568 | 102402423 | N | DUST | ||
| AC016678.4 | 17638 | 17749 | 102402424 | N | DUST | ||
| AC016678.4 | 18021 | 18027 | 102402425 | N | DUST | ||
| AC016678.4 | 18709 | 18764 | 102402426 | N | DUST | ||
| AC016678.4 | 18938 | 18972 | 102402427 | N | DUST | ||
| AC016678.4 | 19605 | 19617 | 102402428 | N | DUST | ||
| AC016678.4 | 19724 | 19730 | 102402429 | N | DUST | ||
| AC016678.4 | 20015 | 20021 | 102402430 | N | DUST | ||
| AC016678.4 | 20203 | 20210 | 102402431 | N | DUST | ||
| AC016678.4 | 20320 | 20327 | 102402432 | N | DUST | ||
| AC016678.4 | 20369 | 20423 | 102402433 | N | DUST | ||
| AC016678.4 | 21121 | 21161 | 102402434 | N | DUST | ||
| AC016678.4 | 21888 | 21894 | 102402435 | N | DUST | ||
| AC016678.4 | 22167 | 22180 | 102402436 | N | DUST | ||
| AC016678.4 | 22442 | 22448 | 102402437 | N | DUST | ||
| AC016678.4 | 22502 | 22508 | 102402438 | N | DUST | ||
| AC016678.4 | 23322 | 23329 | 102402439 | N | DUST | ||
| AC016678.4 | 23984 | 23990 | 102402440 | N | DUST | ||
| AC016678.4 | 24730 | 24736 | 102402441 | N | DUST | ||
| AC016678.4 | 24927 | 24937 | 102402442 | N | DUST | ||
| AC016678.4 | 25005 | 25013 | 102402443 | N | DUST | ||
| AC016678.4 | 26616 | 26625 | 102402444 | N | DUST | ||
| AC016678.4 | 26874 | 26880 | 102402445 | N | DUST | ||
| AC016678.4 | 27165 | 27175 | 102402446 | N | DUST | ||
| AC016678.4 | 28502 | 28520 | 102402447 | N | DUST | ||
| AC016678.4 | 29458 | 29482 | 102402448 | N | DUST | ||
| AC016678.4 | 29635 | 29641 | 102402449 | N | DUST | ||
| AC016678.4 | 29814 | 29822 | 102402450 | N | DUST | ||
| AC016678.4 | 30895 | 30918 | 102402451 | N | DUST | ||
| AC016678.4 | 32028 | 32042 | 102402452 | N | DUST | ||
| AC016678.4 | 32205 | 32211 | 102402453 | N | DUST | ||
| AC016678.4 | 32326 | 32338 | 102402454 | N | DUST | ||
| AC016678.4 | 32392 | 32407 | 102402455 | N | DUST | ||
| AC016678.4 | 32539 | 32556 | 102402456 | N | DUST | ||
| AC016678.4 | 33243 | 33249 | 102402457 | N | DUST | ||
| AC016678.4 | 33636 | 33686 | 102402458 | N | DUST | ||
| AC016678.4 | 34006 | 34012 | 102402459 | N | DUST | ||
| AC016678.4 | 34183 | 34194 | 102402460 | N | DUST | ||
| AC016678.4 | 34364 | 34372 | 102402461 | N | DUST | ||
| AC016678.4 | 35176 | 35408 | 102402462 | N | DUST | ||
| AC016678.4 | 35507 | 35893 | 102402463 | N | DUST | ||
| AC016678.4 | 36734 | 36740 | 102402464 | N | DUST | ||
| AC016678.4 | 36914 | 36955 | 102402465 | N | DUST | ||
| AC016678.4 | 37380 | 37386 | 102402466 | N | DUST | ||
| AC016678.4 | 38879 | 38961 | 102402467 | N | DUST | ||
| AC016678.4 | 40663 | 40670 | 102402468 | N | DUST | ||
| AC016678.4 | 41178 | 41184 | 102402469 | N | DUST | ||
| AC016678.4 | 41236 | 41243 | 102402470 | N | DUST | ||
| AC016678.4 | 42141 | 42148 | 102402471 | N | DUST | ||
| AC016678.4 | 42808 | 42814 | 102402472 | N | DUST | ||
| AC016678.4 | 45892 | 45898 | 102402473 | N | DUST | ||
| AC016678.4 | 46160 | 46260 | 102402474 | N | DUST | ||
| AC016678.4 | 46581 | 46777 | 102402475 | N | DUST | ||
| AC016678.4 | 46789 | 46802 | 102402476 | N | DUST | ||
| AC016678.4 | 47110 | 47349 | 102402477 | N | DUST | ||
| AC016678.4 | 47372 | 47443 | 102402478 | N | DUST | ||
| AC016678.4 | 47462 | 47560 | 102402479 | N | DUST | ||
| AC016678.4 | 47618 | 47647 | 102402480 | N | DUST | ||
| AC016678.4 | 48059 | 48177 | 102402481 | N | DUST | ||
| AC016678.4 | 49103 | 49131 | 102402482 | N | DUST | ||
| AC016678.4 | 49590 | 49692 | 102402483 | N | DUST | ||
| AC016678.4 | 50059 | 50090 | 102402484 | N | DUST | ||
| AC016678.4 | 50177 | 50621 | 102402485 | N | DUST | ||
| AC016678.4 | 50746 | 50758 | 102402486 | N | DUST | ||
| AC016678.4 | 51513 | 51627 | 102402487 | N | DUST | ||
| AC016678.4 | 52822 | 52832 | 102402488 | N | DUST | ||
| AC016678.4 | 54020 | 54283 | 102402489 | N | DUST | ||
| AC016678.4 | 54379 | 54454 | 102402490 | N | DUST | ||
| AC016678.4 | 54603 | 54611 | 102402491 | N | DUST | ||
| AC016678.4 | 54740 | 54752 | 102402492 | N | DUST | ||
| AC016678.4 | 54911 | 54917 | 102402493 | N | DUST | ||
| AC016678.4 | 55440 | 55462 | 102402494 | N | DUST | ||
| AC016678.4 | 55612 | 55633 | 102402495 | N | DUST | ||
| AC016678.4 | 55754 | 55871 | 102402496 | N | DUST | ||
| AC016678.4 | 56410 | 56422 | 102402497 | N | DUST | ||
| AC016678.4 | 56481 | 56543 | 102402498 | N | DUST | ||
| AC016678.4 | 56582 | 56736 | 102402499 | N | DUST | ||
| AC016678.4 | 56755 | 56961 | 102402500 | N | DUST | ||
| AC016678.4 | 57059 | 57262 | 102402501 | N | DUST | ||
| AC016678.4 | 57738 | 57790 | 102402502 | N | DUST | ||
| AC016678.4 | 58150 | 58162 | 102402503 | N | DUST | ||
| AC016678.4 | 58299 | 58305 | 102402504 | N | DUST | ||
| AC016678.4 | 58490 | 58496 | 102402505 | N | DUST | ||
| AC016678.4 | 59263 | 59274 | 102402506 | N | DUST | ||
| AC016678.4 | 59620 | 59627 | 102402507 | N | DUST | ||
| AC016678.4 | 61041 | 61052 | 102402508 | N | DUST | ||
| AC016678.4 | 61354 | 61365 | 102402509 | N | DUST | ||
| AC016678.4 | 61482 | 61578 | 102402510 | N | DUST | ||
| AC016678.4 | 61677 | 61683 | 102402511 | N | DUST | ||
| AC016678.4 | 61814 | 61820 | 102402512 | N | DUST | ||
| AC016678.4 | 62169 | 62188 | 102402513 | N | DUST | ||
| AC016678.4 | 62344 | 62361 | 102402514 | N | DUST | ||
| AC016678.4 | 62472 | 62494 | 102402515 | N | DUST | ||
| AC016678.4 | 63447 | 63476 | 102402516 | N | DUST | ||
| AC016678.4 | 63627 | 63640 | 102402517 | N | DUST | ||
| AC016678.4 | 63910 | 63973 | 102402518 | N | DUST | ||
| AC016678.4 | 64378 | 64385 | 102402519 | N | DUST | ||
| AC016678.4 | 65317 | 65351 | 102402520 | N | DUST | ||
| AC016678.4 | 65526 | 65532 | 102402521 | N | DUST | ||
| AC016678.4 | 65725 | 65732 | 102402522 | N | DUST | ||
| AC016678.4 | 66698 | 66704 | 102402523 | N | DUST | ||
| AC016678.4 | 67278 | 67444 | 102402524 | N | DUST | ||
| AC016678.4 | 68055 | 68064 | 102402525 | N | DUST | ||
| AC016678.4 | 68486 | 68492 | 102402526 | N | DUST | ||
| AC016678.4 | 69947 | 69966 | 102402527 | N | DUST | ||
| AC016678.4 | 71231 | 71293 | 102402528 | N | DUST | ||
| AC016678.4 | 71415 | 71421 | 102402529 | N | DUST | ||
| AC016678.4 | 71551 | 71680 | 102402530 | N | DUST | ||
| AC016678.4 | 72675 | 72698 | 102402531 | N | DUST | ||
| AC016678.4 | 73147 | 73156 | 102402532 | N | DUST | ||
| AC016678.4 | 74174 | 74180 | 102402533 | N | DUST | ||
| AC016678.4 | 75830 | 75837 | 102402534 | N | DUST | ||
| AC016678.4 | 75885 | 75897 | 102402535 | N | DUST | ||
| AC016678.4 | 76152 | 76231 | 102402536 | N | DUST | ||
| AC016678.4 | 76317 | 76397 | 102402537 | N | DUST | ||
| AC016678.4 | 76648 | 76661 | 102402538 | N | DUST | ||
| AC016678.4 | 77005 | 77020 | 102402539 | N | DUST | ||
| AC016678.4 | 77315 | 77577 | 102402540 | N | DUST | ||
| AC016678.4 | 77707 | 77761 | 102402541 | N | DUST | ||
| AC016678.4 | 77874 | 77880 | 102402542 | N | DUST | ||
| AC016678.4 | 78410 | 78545 | 102402543 | N | DUST | ||
| AC016678.4 | 78575 | 78692 | 102402544 | N | DUST | ||
| AC016678.4 | 78823 | 78941 | 102402545 | N | DUST | ||
| AC016678.4 | 78963 | 79026 | 102402546 | N | DUST | ||
| AC016678.4 | 79149 | 79291 | 102402547 | N | DUST | ||
| AC016678.4 | 79359 | 79365 | 102402548 | N | DUST | ||
| AC016678.4 | 79491 | 79497 | 102402549 | N | DUST | ||
| AC016678.4 | 79545 | 79558 | 102402550 | N | DUST | ||
| AC016678.4 | 80086 | 80097 | 102402551 | N | DUST | ||
| AC016678.4 | 80405 | 80418 | 102402552 | N | DUST | ||
| AC016678.4 | 80882 | 80889 | 102402553 | N | DUST | ||
| AC016678.4 | 80891 | 80898 | 102402554 | N | DUST | ||
| AC016678.4 | 81129 | 81136 | 102402555 | N | DUST | ||
| AC016678.4 | 81472 | 81480 | 102402556 | N | DUST | ||
| AC016678.4 | 81643 | 81655 | 102402557 | N | DUST | ||
| AC016678.4 | 82248 | 82254 | 102402558 | N | DUST | ||
| AC016678.4 | 82665 | 82673 | 102402559 | N | DUST | ||
| AC016678.4 | 84803 | 84823 | 102402560 | N | DUST | ||
| AC016678.4 | 85918 | 85924 | 102402561 | N | DUST | ||
| AC016678.4 | 85999 | 86005 | 102402562 | N | DUST | ||
| AC016678.4 | 86093 | 86099 | 102402563 | N | DUST | ||
| AC016678.4 | 86714 | 86750 | 102402564 | N | DUST | ||
| AC016678.4 | 86898 | 86915 | 102402565 | N | DUST | ||
| AC016678.4 | 87144 | 87150 | 102402566 | N | DUST | ||
| AC016678.4 | 87184 | 87191 | 102402567 | N | DUST | ||
| AC016678.4 | 87539 | 87560 | 102402568 | N | DUST | ||
| AC016678.4 | 88009 | 88024 | 102402569 | N | DUST | ||
| AC016678.4 | 88158 | 88196 | 102402570 | N | DUST | ||
| AC016678.4 | 88612 | 88674 | 102402571 | N | DUST | ||
| AC016678.4 | 88798 | 88894 | 102402572 | N | DUST | ||
| AC016678.4 | 89257 | 89266 | 102402573 | N | DUST | ||
| AC016678.4 | 89304 | 89322 | 102402574 | N | DUST | ||
| AC016678.4 | 89503 | 89510 | 102402575 | N | DUST | ||
| AC016678.4 | 90428 | 90459 | 102402576 | N | DUST | ||
| AC016678.4 | 90529 | 90587 | 102402577 | N | DUST | ||
| AC016678.4 | 91151 | 91176 | 102402578 | N | DUST | ||
| AC016678.4 | 91791 | 91799 | 102402579 | N | DUST | ||
| AC016678.4 | 92126 | 92153 | 102402580 | N | DUST | ||
| AC016678.4 | 92309 | 92336 | 102402581 | N | DUST | ||
| AC016678.4 | 92417 | 92432 | 102402582 | N | DUST | ||
| AC016678.4 | 92619 | 92639 | 102402583 | N | DUST | ||
| AC016678.4 | 92786 | 92792 | 102402584 | N | DUST | ||
| AC016678.4 | 94459 | 94475 | 102402585 | N | DUST | ||
| AC016678.4 | 94687 | 94696 | 102402586 | N | DUST | ||
| AC016678.4 | 94735 | 94746 | 102402587 | N | DUST | ||
| AC016678.4 | 94748 | 94774 | 102402588 | N | DUST | ||
| AC016678.4 | 95544 | 95550 | 102402589 | N | DUST | ||
| AC016678.4 | 95624 | 95631 | 102402590 | N | DUST | ||
| AC016678.4 | 96479 | 96502 | 102402591 | N | DUST | ||
| AC016678.4 | 96769 | 96790 | 102402592 | N | DUST | ||
| AC016678.4 | 97629 | 97680 | 102402593 | N | DUST | ||
| AC016678.4 | 98192 | 98198 | 102402594 | N | DUST | ||
| AC016678.4 | 98325 | 98334 | 102402595 | N | DUST | ||
| AC016678.4 | 98449 | 98455 | 102402596 | N | DUST | ||
| AC016678.4 | 98625 | 98631 | 102402597 | N | DUST | ||
| AC016678.4 | 98814 | 98821 | 102402598 | N | DUST | ||
| AC016678.4 | 98883 | 98895 | 102402599 | N | DUST | ||
| AC016678.4 | 99314 | 99320 | 102402600 | N | DUST | ||
| AC016678.4 | 99764 | 99771 | 102402601 | N | DUST | ||
| AC016678.4 | 99803 | 99809 | 102402602 | N | DUST | ||
| AC016678.4 | 100209 | 100215 | 102402603 | N | DUST | ||
| AC016678.4 | 100279 | 100356 | 102402604 | N | DUST | ||
| AC016678.4 | 100428 | 100498 | 102402605 | N | DUST | ||
| AC016678.4 | 101001 | 101038 | 102402606 | N | DUST | ||
| AC016678.4 | 101189 | 101268 | 102402607 | N | DUST | ||
| AC016678.4 | 101372 | 101379 | 102402608 | N | DUST | ||
| AC016678.4 | 101709 | 101716 | 102402609 | N | DUST | ||
| AC016678.4 | 102211 | 102217 | 102402610 | N | DUST | ||
| AC016678.4 | 102432 | 102530 | 102402611 | N | DUST | ||
| AC016678.4 | 103270 | 103278 | 102402612 | N | DUST | ||
| AC016678.4 | 103703 | 103713 | 102402613 | N | DUST | ||
| AC016678.4 | 103836 | 103872 | 102402614 | N | DUST | ||
| AC016678.4 | 103917 | 103924 | 102402615 | N | DUST | ||
| AC016678.4 | 104157 | 104163 | 102402616 | N | DUST | ||
| AC016678.4 | 104308 | 104601 | 102402617 | N | DUST | ||
| AC016678.4 | 106053 | 106060 | 102402618 | N | DUST | ||
| AC016678.4 | 106206 | 106212 | 102402619 | N | DUST | ||
| AC016678.4 | 106614 | 106720 | 102402620 | N | DUST | ||
| AC016678.4 | 107850 | 107914 | 102402621 | N | DUST | ||
| AC016678.4 | 107922 | 107975 | 102402622 | N | DUST | ||
| AC016678.4 | 108019 | 108025 | 102402623 | N | DUST | ||
| AC016678.4 | 111963 | 111970 | 102402624 | N | DUST | ||
| AC016678.4 | 113680 | 113722 | 102402625 | N | DUST | ||
| AC016678.4 | 114183 | 114189 | 102402626 | N | DUST | ||
| AC016678.4 | 115240 | 115319 | 102402627 | N | DUST | ||
| AC016678.4 | 116364 | 116623 | 102402628 | N | DUST | ||
| AC016678.4 | 116866 | 116932 | 102402629 | N | DUST | ||
| AC016678.4 | 117636 | 117709 | 102402630 | N | DUST | ||
| AC016678.4 | 118983 | 119046 | 102402631 | N | DUST | ||
| AC016678.4 | 119062 | 119068 | 102402632 | N | DUST | ||
| AC016678.4 | 119375 | 119383 | 102402633 | N | DUST | ||
| AC016678.4 | 119413 | 119451 | 102402634 | N | DUST | ||
| AC016678.4 | 119864 | 119870 | 102402635 | N | DUST | ||
| AC016678.4 | 120334 | 120439 | 102402636 | N | DUST | ||
| AC016678.4 | 121312 | 121320 | 102402637 | N | DUST | ||
| AC016678.4 | 121594 | 121648 | 102402638 | N | DUST | ||
| AC016678.4 | 122008 | 122014 | 102402639 | N | DUST | ||
| AC016678.4 | 122322 | 122341 | 102402640 | N | DUST | ||
| AC016678.4 | 122514 | 122521 | 102402641 | N | DUST | ||
| AC016678.4 | 122770 | 122796 | 102402642 | N | DUST | ||
| AC016678.4 | 122854 | 122876 | 102402643 | N | DUST | ||
| AC016678.4 | 122907 | 122913 | 102402644 | N | DUST | ||
| AC016678.4 | 123343 | 123414 | 102402645 | N | DUST | ||
| AC016678.4 | 124314 | 124321 | 102402646 | N | DUST | ||
| AC016678.4 | 125042 | 125048 | 102402647 | N | DUST | ||
| AC016678.4 | 125314 | 125402 | 102402648 | N | DUST | ||
| AC016678.4 | 127015 | 127021 | 102402649 | N | DUST | ||
| AC016678.4 | 127174 | 127202 | 102402650 | N | DUST | ||
| AC016678.4 | 127705 | 127776 | 102402651 | N | DUST | ||
| AC016678.4 | 128465 | 128486 | 102402652 | N | DUST | ||
| AC016678.4 | 128801 | 128807 | 102402653 | N | DUST | ||
| AC016678.4 | 129198 | 129216 | 102402654 | N | DUST | ||
| AC016678.4 | 129533 | 129801 | 102402655 | N | DUST | ||
| AC016678.4 | 129962 | 129969 | 102402656 | N | DUST | ||
| AC016678.4 | 131028 | 131034 | 102402657 | N | DUST | ||
| AC016678.4 | 131598 | 131604 | 102402658 | N | DUST | ||
| AC016678.4 | 131969 | 131975 | 102402659 | N | DUST | ||
| AC016678.4 | 132826 | 132901 | 102402660 | N | DUST | ||
| AC016678.4 | 133045 | 133051 | 102402661 | N | DUST | ||
| AC016678.4 | 133876 | 133903 | 102402662 | N | DUST | ||
| AC016678.4 | 134681 | 134722 | 102402663 | N | DUST | ||
| AC016678.4 | 134758 | 134768 | 102402664 | N | DUST | ||
| AC016678.4 | 134880 | 134887 | 102402665 | N | DUST | ||
| AC016678.4 | 134959 | 134965 | 102402666 | N | DUST | ||
| AC016678.4 | 135578 | 135599 | 102402667 | N | DUST | ||
| AC016678.4 | 135723 | 135785 | 102402668 | N | DUST | ||
| AC016678.4 | 135899 | 135934 | 102402669 | N | DUST | ||
| AC016678.4 | 136109 | 136133 | 102402670 | N | DUST | ||
| AC016678.4 | 136569 | 136583 | 102402671 | N | DUST | ||
| AC016678.4 | 136689 | 136745 | 102402672 | N | DUST | ||
| AC016678.4 | 136930 | 136938 | 102402673 | N | DUST | ||
| AC016678.4 | 137340 | 137421 | 102402674 | N | DUST | ||
| AC016678.4 | 137536 | 137542 | 102402675 | N | DUST | ||
| AC016678.4 | 139495 | 139501 | 102402676 | N | DUST | ||
| AC016678.4 | 140195 | 140218 | 102402677 | N | DUST | ||
| AC016678.4 | 140318 | 140364 | 102402678 | N | DUST | ||
| AC016678.4 | 141111 | 141593 | 102402679 | N | DUST | ||
| AC016678.4 | 142182 | 142274 | 102402680 | N | DUST | ||
| AC016678.4 | 142281 | 142313 | 102402681 | N | DUST | ||
| AC015979.4 | 11477 | 11988 | 10650245 | + | MER9a1 | ERVK | LTR |
| AC015979.4 | 11989 | 12812 | 10650246 | - | MER4D | ERV1 | LTR |
| AC015979.4 | 13449 | 13473 | 10650247 | + | AT_rich | Low_complexity | |
| AC015979.4 | 13666 | 13785 | 10650248 | + | FLAM_C | Alu | SINE |
| AC015979.4 | 14002 | 14287 | 10650249 | + | AluSx | Alu | SINE |
| AC015979.4 | 14356 | 14383 | 10650250 | + | AT_rich | Low_complexity | |
| AC015979.4 | 14677 | 14752 | 10650251 | + | L2a | L2 | |
| AC015979.4 | 15067 | 15338 | 10650252 | + | AluJb | Alu | SINE |
| AC015979.4 | 15339 | 15390 | 10650253 | + | GA-rich | ||
| AC015979.4 | 15392 | 15522 | 10650254 | + | A-rich | ||
| AC015979.4 | 15512 | 15649 | 10650255 | + | (GGAA)n | Simple_repeat | |
| AC015979.4 | 15997 | 16041 | 10650256 | + | (TTTA)n | ||
| AC015979.4 | 16234 | 16905 | 10650257 | - | LTR1F2 | ERV1 | LTR |
| AC015979.4 | 7906 | 11474 | 10650245 | + | HERVK9-int | ERVK | |
| AC015979.4 | 7764 | 7908 | 10650245 | + | HERVK9-int | ERVK | |
| AC015979.4 | 7688 | 7721 | 10650244 | + | AT_rich | Low_complexity | |
| AC015979.4 | 7306 | 7420 | 10650241 | - | L1MD2 | L1 | |
| AC015979.4 | 7016 | 7305 | 10650243 | - | AluJb | Alu | SINE |
| AC015979.4 | 6892 | 7015 | 10650241 | - | L1MD2 | L1 | |
| AC015979.4 | 6582 | 6891 | 10650242 | - | AluY | Alu | SINE |
| AC015979.4 | 6054 | 6581 | 10650241 | - | L1MD2 | L1 | |
| AC015979.4 | 5715 | 6003 | 10650240 | - | AluSx | Alu | SINE |
| AC015979.4 | 5309 | 5523 | 10650239 | + | MER58A | hAT-Charlie | DNA |
| AC015979.4 | 5123 | 5235 | 10650238 | - | L2a | L2 | |
| AC015979.4 | 4943 | 5079 | 10650236 | - | AluSx | Alu | SINE |
| AC015979.4 | 4732 | 4942 | 10650237 | - | AluY | Alu | SINE |
| AC015979.4 | 4533 | 4731 | 10650236 | - | AluSx | Alu | SINE |
| AC015979.4 | 3351 | 3383 | 10650235 | + | (A)n | Simple_repeat | |
| AC015979.4 | 3079 | 3350 | 10650234 | + | AluSx | Alu | SINE |
| AC015979.4 | 2614 | 2979 | 10650232 | - | LTR51 | ERV1 | LTR |
| AC015979.4 | 2531 | 2601 | 10650233 | + | (ATGGTG)n | ||
| AC015979.4 | 2233 | 2529 | 10650232 | - | LTR51 | ERV1 | LTR |
| AC015979.4 | 1907 | 2203 | 10650231 | + | AluJb | Alu | SINE |
| AC015979.4 | 1297 | 1574 | 10650230 | - | AluSx | Alu | SINE |
| AC015979.4 | 1135 | 1294 | 10650229 | + | (TA)n | Simple_repeat | |
| AC015979.4 | 1052 | 1115 | 10650228 | + | AT_rich | Low_complexity | |
| AC015979.4 | 1 | 173 | 10650227 | - | AluSx | Alu | SINE |
| AC015979.4 | 16986 | 17251 | 10650258 | + | AluSx | Alu | SINE |
| AC015979.4 | 4810 | 4824 | 102414448 | N | DUST | ||
| AC015979.4 | 4945 | 4952 | 102414449 | N | DUST | ||
| AC015979.4 | 5628 | 5644 | 102414450 | N | DUST | ||
| AC015979.4 | 5724 | 5743 | 102414451 | N | DUST | ||
| AC015979.4 | 6047 | 6063 | 102414452 | N | DUST | ||
| AC015979.4 | 6582 | 6613 | 102414453 | N | DUST | ||
| AC015979.4 | 6762 | 6769 | 102414454 | N | DUST | ||
| AC015979.4 | 6982 | 7032 | 102414455 | N | DUST | ||
| AC015979.4 | 7173 | 7180 | 102414456 | N | DUST | ||
| AC015979.4 | 11147 | 11158 | 102414457 | N | DUST | ||
| AC015979.4 | 12727 | 12734 | 102414458 | N | DUST | ||
| AC015979.4 | 13008 | 13014 | 102414459 | N | DUST | ||
| AC015979.4 | 14280 | 14287 | 102414460 | N | DUST | ||
| AC015979.4 | 14356 | 14389 | 102414461 | N | DUST | ||
| AC015979.4 | 15328 | 15649 | 102414462 | N | DUST | ||
| AC015979.4 | 15988 | 16042 | 102414463 | N | DUST | ||
| AC015979.4 | 16770 | 16776 | 102414464 | N | DUST | ||
| AC015979.4 | 17658 | 17670 | 102414465 | N | DUST | ||
| AC015979.4 | 17770 | 17833 | 102414466 | N | DUST | ||
| AC015979.4 | 18014 | 18024 | 102414467 | N | DUST | ||
| AC015979.4 | 18027 | 18039 | 102414468 | N | DUST | ||
| AC015979.4 | 18194 | 18259 | 102414469 | N | DUST | ||
| AC015979.4 | 18565 | 18574 | 102414470 | N | DUST | ||
| AC015979.4 | 20619 | 20688 | 102414471 | N | DUST | ||
| AC015979.4 | 20829 | 20835 | 102414472 | N | DUST | ||
| AC015979.4 | 21283 | 21302 | 102414473 | N | DUST | ||
| AC015979.4 | 21433 | 21468 | 102414474 | N | DUST | ||
| AC015979.4 | 17279 | 17384 | 10650259 | + | FLAM_C | Alu | SINE |
| AC015979.4 | 17385 | 17408 | 10650260 | + | AT_rich | Low_complexity | |
| AC015979.4 | 17731 | 17768 | 10650261 | + | AT_rich | Low_complexity | |
| AC015979.4 | 17907 | 18212 | 10650262 | + | AluJb | Alu | SINE |
| AC015979.4 | 18683 | 18873 | 10650263 | + | MER3 | hAT-Charlie | DNA |
| AC015979.4 | 18874 | 19471 | 10650264 | + | MER4B | ERV1 | LTR |
| AC015979.4 | 19560 | 20107 | 10650265 | - | MER61E | ERV1 | LTR |
| AC015979.4 | 20465 | 20623 | 10650266 | - | LTR8 | ERV1 | LTR |
| AC015979.4 | 20624 | 20657 | 10650267 | + | (TTTTG)n | ||
| AC015979.4 | 20660 | 20969 | 10650268 | - | AluSx | Alu | SINE |
| AC015979.4 | 20970 | 21240 | 10650266 | - | LTR8 | ERV1 | LTR |
| AC015979.4 | 21293 | 22089 | 10650269 | - | L1PA3 | L1 | |
| AC015979.4 | 22090 | 22211 | 10650266 | - | LTR8 | ERV1 | LTR |
| AC015979.4 | 559 | 565 | 102414437 | N | DUST | ||
| AC015979.4 | 1061 | 1223 | 102414438 | N | DUST | ||
| AC015979.4 | 1234 | 1295 | 102414439 | N | DUST | ||
| AC015979.4 | 1297 | 1304 | 102414440 | N | DUST | ||
| AC015979.4 | 2026 | 2039 | 102414441 | N | DUST | ||
| AC015979.4 | 2195 | 2203 | 102414442 | N | DUST | ||
| AC015979.4 | 2526 | 2622 | 102414443 | N | DUST | ||
| AC015979.4 | 2939 | 2945 | 102414444 | N | DUST | ||
| AC015979.4 | 3321 | 3378 | 102414445 | N | DUST | ||
| AC015979.4 | 4256 | 4263 | 102414446 | N | DUST | ||
| AC015979.4 | 4506 | 4564 | 102414447 | N | DUST |