NHGRI Structural Variation Project

The sequence-based Survey of Human Structural Variation aims to characterize common structural variants that are larger than SNPs, for example, multi-base insertions/deletions, inversions, translocations, and duplications. The approach entails sequencing the ends of fosmids and BACs from multiple individuals. This strategy can be efficiently scaled with current technology and is complementary to efforts to obtain human structural variation information by other technologies. more...

Fosmid library information
HapMap Identifier Population Library Name Status End sequences submitted to Trace Full insert sequences submitted to GenBank Reference
NA15510 N/A WI2 (G248) Complete 2,298,885 411 Tuzun et el., 2005
NA18517 Yoruba ABC7 Complete 2,152,975 157 Kidd et al., 2008
NA18507 Yoruba ABC8 Complete 3,888,476 225 Kidd et al., 2008
NA18956 Japan ABC9 Complete 2,084,892 722 Kidd et al., 2008
NA19240 Yoruba ABC10 Complete 2,121,489 509 Kidd et al., 2008
NA18555 China ABC11 Complete 1,966,644 386 Kidd et al., 2008
NA12878 CEPH ABC12 Complete 2,169,280 454 Kidd et al., 2008
NA19129 Yoruba ABC13 Complete 2,057,345 368 Kidd et al., 2008
NA12156 CEPH ABC14 Complete 2,089,193 351 Kidd et al., 2008
NA18552 China COR02,COR2A Complete 1,992,678 180
NA18947 Japan ABC16 Ongoing 1,546,191 202
NA18564 China ABC17 Ongoing 56,944  
NA10847 CEPH ABC18 Ongoing 1,209,419 65
NA18573 China ABC19 Ongoing 43,351  
NA19102 Yoruba ABC20 Ongoing 89,566  
NA11993 CEPH ABC21 Ongoing 684,716 41
NA11840 CEPH ABC22 Ongoing 785,461 1
NA18523 Yoruba ABC23 Ongoing 1,544,982  
NA18502 Yoruba ABC24 Ongoing 1,388,082 261
NA11832 CEPH ABC25 Ongoing 12,286  
NA18861 Yoruba ABC26 Ongoing 14,559  
NA18942 Japan ABC27 Ongoing 1,234,412 170

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Last updated: 31 Mar 2015